LOCUS       KX398310                1202 bp    RNA     linear   VRL 23-NOV-2016
DEFINITION  Avian orthoreovirus strain 16821-M-06 outer clamp gene, complete
            cds.
ACCESSION   KX398310
VERSION     KX398310.1
KEYWORDS    .
SOURCE      Avian orthoreovirus
  ORGANISM  Avian orthoreovirus
            Viruses; dsRNA viruses; Reoviridae; Spinareovirinae;
            Orthoreovirus.
REFERENCE   1  (bases 1 to 1202)
  AUTHORS   Farkas,S.L., Marton,S., Dandar,E., Kugler,R., Gal,B., Jakab,F.,
            Balint,A., Kecskemeti,S. and Banyai,K.
  TITLE     Lineage diversification, homo- and heterologous reassortment and
            recombination shape the evolution of chicken orthoreoviruses
  JOURNAL   Sci Rep 6, 36960 (2016)
   PUBMED   27830770
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1202)
  AUTHORS   Farkas,S.L., Marton,S., Dandar,E., Gal,B., Balint,A.,
            Kecskemeti,S. and Banyai,K.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-JUN-2016) Pathogen discovery, Institute for
            Veterinary Medical Research, Centre of Agricultural Research,
            Hungarian Academy of Sciences, Hungaria krt. 21., Budapest, Pest
            1143, Hungary
COMMENT     ##Assembly-Data-START## Assembly Method :: CLC Bio software v. v.
            7.0.4 Sequencing Technology :: IonTorrent ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1202
                     /mol_type="genomic RNA"
                     /country="Hungary"
                     /collection_date="2006"
                     /host="Gallus gallus"
                     /db_xref="taxon:38170"
                     /strain="16821-M-06"
                     /organism="Avian orthoreovirus"
     CDS             31..1134
                     /codon_start=1
                     /protein_id="APD15469.1"
                     /translation="MEVRVPNFHSFVEGITSSYLKTPACWNARTAWDTVTFHVPDVIR
                     VGNAYCCSQCCGVLYYGTLPSDGNYFPHHKCHQQQFRTDTPLLRYVRIGRTTEHLLDQ
                     YAVALESIAEHYDEISQRMVDEPEKDEVTPLDIVTRTESIRSDKAVDPDFWTYPLERR
                     SDDSRRDIASSCWRMIDASSRSLTLPNCLVSPSLHSRSVFGQMQTTTTIYDVAASGKA
                     VKFSPMVATLSQRDAGPVMLANTDPADGVYSFWTSHFAFSPLIGGVGITGQYARESYH
                     QVGHPVIGSGKKASHYRNLFMEAWRGWSKSAFACATGMEPAECESRLRGHARTMLGRS
                     LPNVCDDDVAPQSGAVLASLQKTTKFTVVECGW"
                     /product="outer clamp"
ORIGIN      
        1 gctttttgag tccttagcgt gcaagccgca atggaggtac gtgtgccaaa ctttcactcg
       61 tttgttgaag gaattacatc tagttacttg aagactcctg cttgttggaa tgcacgaaca
      121 gcttgggaca ctgtgacttt ccacgtccct gacgtgatta gagttgggaa cgcctattgt
      181 tgctctcagt gctgtggtgt actctactat gggaccctgc catctgatgg gaactacttc
      241 cctcatcaca aatgccatca gcaacagttt aggactgata ccccgctact ccggtacgtt
      301 agaatcggtc gaacgactga gcatctgctg gatcaatatg ccgtcgctct ggagtccatc
      361 gctgaacact atgatgaaat cagccaacgc atggttgatg agcctgagaa ggacgaagtt
      421 acaccccttg acatcgtaac gcgcaccgag tctatcagaa gtgataaggc agtagatccg
      481 gatttttgga cctacccgct cgaacggcgc tctgatgatt ctcgtcgaga cattgcctca
      541 tcatgttgga ggatgattga tgcgtcatca cgtagtctga ctcttcccaa ttgccttgtt
      601 tccccatctc tgcattcgcg ttccgttttc ggtcaaatgc aaacgaccac cactatctac
      661 gatgttgccg cgtctggaaa ggcggtgaag ttttctccga tggttgctac cctctctcaa
      721 cgcgatgctg ggcccgtgat gctcgcaaat actgatccag cggatggcgt gtactcattt
      781 tggacgtcac actttgcctt ctcgccgctc attggtggag tcgggattac tgggcagtac
      841 gctcgtgagt cataccacca ggtaggtcat ccggtgattg ggagtggtaa gaaagcgtcg
      901 cattacagga atctgttcat ggaagcgtgg cgtggatggt cgaaatcagc ttttgcgtgt
      961 gctacgggaa tggagcctgc tgaatgtgaa tctcgcttga gaggtcacgc tcgtaccatg
     1021 cttggacgtt ctctgccaaa cgtctgtgac gatgacgtcg ctccacagtc tggtgccgta
     1081 ctagcgtctc tgcagaagac tactaagttc actgtggtgg agtgtggttg gtaagtgcct
     1141 ccgggtcaaa atgcacatag gctcccacct atgtgacggt tagcgggact cgcctattca
     1201 tc
//