LOCUS       KX398316                2072 bp    RNA     linear   VRL 23-NOV-2016
DEFINITION  Avian orthoreovirus strain 17203-M-06 outer shell gene, complete
            cds.
ACCESSION   KX398316
VERSION     KX398316.1
KEYWORDS    .
SOURCE      Avian orthoreovirus
  ORGANISM  Avian orthoreovirus
            Viruses; dsRNA viruses; Reoviridae; Spinareovirinae;
            Orthoreovirus.
REFERENCE   1  (bases 1 to 2072)
  AUTHORS   Farkas,S.L., Marton,S., Dandar,E., Kugler,R., Gal,B., Jakab,F.,
            Balint,A., Kecskemeti,S. and Banyai,K.
  TITLE     Lineage diversification, homo- and heterologous reassortment and
            recombination shape the evolution of chicken orthoreoviruses
  JOURNAL   Sci Rep 6, 36960 (2016)
   PUBMED   27830770
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2072)
  AUTHORS   Farkas,S.L., Marton,S., Dandar,E., Gal,B., Balint,A.,
            Kecskemeti,S. and Banyai,K.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-JUN-2016) Pathogen discovery, Institute for
            Veterinary Medical Research, Centre of Agricultural Research,
            Hungarian Academy of Sciences, Hungaria krt. 21., Budapest, Pest
            1143, Hungary
COMMENT     ##Assembly-Data-START## Assembly Method :: CLC Bio software v. v.
            7.0.4 Sequencing Technology :: IonTorrent ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..2072
                     /mol_type="genomic RNA"
                     /country="Hungary"
                     /collection_date="2006"
                     /host="Gallus gallus"
                     /db_xref="taxon:38170"
                     /strain="17203-M-06"
                     /organism="Avian orthoreovirus"
     CDS             30..2060
                     /codon_start=1
                     /protein_id="APD15475.1"
                     /translation="MGNATSVVQNFNIQGDGNHFAPSAETASSAVPSLSLNPGLLNPG
                     GKAWTLIDPTLDASDPSSLRLMTSADLSVLSNAATRNATGFLPTSGMYVVPSKETLSV
                     VTGHALSQFEKLQMACELDRDYLDARGVSPESVDISNYIVYINCYVGVSARQAASNFQ
                     THVPVITKSRMTQFMTSAQNILQVLGPWERDVRELLTILPTSTSAGKLSCDMKSVVRF
                     IDDQLSDTSLCRLYPECAASAVAKRNGGIRWRQPDSDDAPSLATNDVAASTMGALANT
                     TPLAEKSNSGEESMRLVNDVGVDIICSRAPVSASVWSRTVEPKSYNIRTLRVEEALWL
                     RECQASSGFDVEYTLPDESGQKHFWLQKGSTVINLEQTGSMMFEVNVSGKDYKKGSFD
                     PNNKKLVLLVMQSKIPFEMWTTASQISGIAQVAEVTVHAADSSTPDRKIIGETSLSYL
                     FERETITTANTEVNTYLLCTWQLDAQQSDGTNAWQDAWDAITTLTPLTSGTVTVKGTS
                     VDSIVPADLVGSYTPESLSAALPNDAGRILADKAIKLADAIKKEDDSVIDESSPFSTP
                     IQGVLAVKQLDTDGTRGVRTLQPPSFLKRVASRALHMFLGDPQSILKMTTPVLKDPDV
                     WTGFIQGVRDGIRTKSLSAGVRSVYNNVTATQSVQSWKQGFLTKVQTLFKPS"
                     /product="outer shell"
ORIGIN      
        1 gctttttgag tgctagcctt tctcacaaga tgggtaacgc aacgtctgtt gttcagaact
       61 ttaatatcca gggtgatggt aatcacttcg ctccctccgc tgaaaccgca tcatctgccg
      121 tcccatcttt atcattaaat cctgggctgc tcaatcctgg cggtaaggca tggactttaa
      181 ttgatccaac attggatgct tctgacccgt cttcattgcg tctgatgacg tctgctgact
      241 tgtctgtctt gtcaaacgcc gctacgagaa acgcaactgg tttccttccc acgtctggca
      301 tgtacgttgt cccttctaaa gagactctga gtgtggtgac tggtcatgct ctctcccagt
      361 ttgaaaagct tcagatggct tgtgagttgg atcgcgacta tctggatgcc cgaggtgttt
      421 cacccgagtc agttgacata tccaactata tagtgtatat caattgctat gttggtgtat
      481 cggctcgcca agccgcttct aatttccaaa cgcatgtccc cgtcatcaca aagtcccgaa
      541 tgacccagtt tatgacatct gctcagaata tacttcaagt gctggggcct tgggagcgag
      601 atgttcgtga gctgctgaca attcttccga cctccaccag cgctggcaag ctctcttgtg
      661 atatgaagtc tgttgtgcga ttcattgacg atcaactttc tgacactagc ttgtgtcgat
      721 tgtatcccga gtgtgctgct tcggctgttg cgaagcgaaa tggtggtata agatggaggc
      781 agccggattc cgatgatgct ccttctctgg cgacgaatga cgttgctgca tctaccatgg
      841 gtgcactggc gaacactact ccgctagctg aaaaatcaaa ctcgggtgaa gagtccatgc
      901 gtttggtgaa tgacgttggc gttgatatca tttgttcacg tgctcccgtt agtgcctccg
      961 tatggtcacg caccgtcgag cctaaatcgt ataatattcg aacgcttcgg gttgaagagg
     1021 ctctatggtt aagggagtgt caagcttcgt ctggttttga cgttgagtat acgcttcctg
     1081 atgagtctgg tcaaaagcat ttctggcttc aaaaaggttc aactgtaatt aaccttgaac
     1141 agactggcag catgatgttt gaggtgaatg tatctggtaa ggattataag aagggttcgt
     1201 ttgatccaaa caataagaaa ttggttctgc tggtcatgca atccaaaatc ccatttgaaa
     1261 tgtggactac tgcctctcaa atatcaggta ttgcgcaagt ggctgaagtg actgttcatg
     1321 ccgcggacag ttccactccc gatcgtaaga tcatcggtga gacatctcta tcctatctat
     1381 tcgaacgtga gactatcacg accgccaata cagaagttaa tacttatcta ctttgtactt
     1441 ggcaattaga tgctcaacag agtgacggga ctaatgcatg gcaagacgcc tgggatgcaa
     1501 taaccacgct gactccactt acatcgggta ctgtaaccgt taaaggtact tcagtcgatt
     1561 ccattgttcc cgctgatctg gttggctctt acacccctga gtcattgtct gctgctttac
     1621 ctaacgatgc aggtcgaatc ctcgccgata aagccataaa attggctgat gcgatcaaga
     1681 aagaagatga ttcggtgatc gacgaatctt cgccttttag tactccgata cagggcgtac
     1741 tggcagtcaa acaattagac actgatggca ctcgtggagt taggacacta caacctccct
     1801 cgtttttgaa gcgagtggca tcacgtgcac ttcacatgtt tttgggtgat cctcagtcta
     1861 tcttgaaaat gactacccct gtgctcaaag atccggacgt atggacgggg ttcatacaag
     1921 gtgttcgtga cggtataagg acgaagtcgc tgtctgcggg tgttcgatca gtgtataata
     1981 atgttaccgc tacccagtcc gtccagtcat ggaagcaggg ttttctgacg aaagttcaga
     2041 cgttgttcaa accatcctga ggtggtaagg cc
//