LOCUS       KX398290                1201 bp    RNA     linear   VRL 23-NOV-2016
DEFINITION  Avian orthoreovirus strain 3457-M-11 outer clamp gene, complete
            cds.
ACCESSION   KX398290
VERSION     KX398290.1
KEYWORDS    .
SOURCE      Avian orthoreovirus
  ORGANISM  Avian orthoreovirus
            Viruses; dsRNA viruses; Reoviridae; Spinareovirinae;
            Orthoreovirus.
REFERENCE   1  (bases 1 to 1201)
  AUTHORS   Farkas,S.L., Marton,S., Dandar,E., Kugler,R., Gal,B., Jakab,F.,
            Balint,A., Kecskemeti,S. and Banyai,K.
  TITLE     Lineage diversification, homo- and heterologous reassortment and
            recombination shape the evolution of chicken orthoreoviruses
  JOURNAL   Sci Rep 6, 36960 (2016)
   PUBMED   27830770
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1201)
  AUTHORS   Farkas,S.L., Marton,S., Dandar,E., Gal,B., Balint,A.,
            Kecskemeti,S. and Banyai,K.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-JUN-2016) Pathogen discovery, Institute for
            Veterinary Medical Research, Centre of Agricultural Research,
            Hungarian Academy of Sciences, Hungaria krt. 21., Budapest, Pest
            1143, Hungary
COMMENT     ##Assembly-Data-START## Assembly Method :: CLC Bio software v. v.
            7.0.4 Sequencing Technology :: IonTorrent ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1201
                     /mol_type="genomic RNA"
                     /country="Hungary"
                     /collection_date="2011"
                     /host="Gallus gallus"
                     /db_xref="taxon:38170"
                     /strain="3457-M-11"
                     /organism="Avian orthoreovirus"
     CDS             30..1133
                     /codon_start=1
                     /protein_id="APD15445.1"
                     /translation="MEVRVPNFHSFVEGITSSYLKTPACWNARTAWDTVTFHVPDVIR
                     VGNAYCCSQCCGVLYYGTLPSDGNYFPHHKCHQQQFRTDTPLLRYVRIGRTTEHLLDQ
                     YAVALESIAEHYDEISQRMVDEPEKDEVTPLDIVTRTESIRSDKAVDPDFWTYPLERR
                     SDDSRQDIASSCWRMIDASSRSLTLPNCLVSPSLHSRSVFGQMQTTTTIYDVAASGKA
                     VKFSPMVATLSQRDAGPVTLANTDPADGVYSFWTSHFAFSPLIGGVGITGQYARESYH
                     QVGHPVIGSGKKASHYRNLFMEAWRGWSKSAFACATGMEPAECESRLRGHARTMLGRS
                     LPNVCDDDVAPQSGAVLASLQKTTKFTVVECGW"
                     /product="outer clamp"
ORIGIN      
        1 gcttttgggt ccttagcgtg caagccgcaa tggaggtacg tgtgccaaac tttcactcgt
       61 ttgttgaagg aattacatct agttacttga agactcctgc ttgttggaat gcacgaacag
      121 cttgggacac tgtgactttc cacgtccctg acgtgattag agttgggaac gcctattgtt
      181 gctctcagtg ctgtggtgta ctttactatg gaaccctgcc atctgatggg aactacttcc
      241 ctcatcacaa atgccatcag caacagttta gaaccgatac cccgctactc cggtacgtaa
      301 gaatcggtcg aacgactgag catctgctgg atcaatatgc cgtcgctctg gagtccatcg
      361 ctgaacacta tgatgaaatc agccaacgca tggttgatga gcctgagaag gacgaagtta
      421 cgccccttga catcgtaacg cgcaccgagt ctatcagaag tgacaaggca gttgatccgg
      481 atttttggac ctacccactc gaacggcgct ctgatgattc tcgtcaagac attgcctcgt
      541 catgttggag gatgattgat gcgtcatcac gtagtttgac tcttcccaat tgtcttgttt
      601 caccatctct gcattcgcgt tccgttttcg gtcaaatgca aacgaccacc accatctacg
      661 atgttgccgc gtctggaaag gcggtgaagt tttctccgat ggttgctacc ctctcccaac
      721 gcgatgctgg gcccgtgacg ctcgcaaata ctgatccagc ggatggtgtg tactcctttt
      781 ggacgtcaca ctttgccttt tcgccgctca ttggtggagt cgggattact gggcagtacg
      841 ctcgcgagtc atatcaccag gtaggtcatc cggtgattgg gagtggtaag aaagcgtcgc
      901 attacaggaa tctgttcatg gaagcgtggc gtggatggtc gaaatcagct tttgcgtgtg
      961 ctacgggaat ggagcctgct gaatgtgaat ctcgcttgag aggtcacgct cgtaccatgc
     1021 ttggacgttc tctgccaaac gtctgtgacg atgacgtcgc tccacagtct ggtgccgtac
     1081 tagcgtctct gcagaagact accaagttca ctgtggtgga gtgtggttgg taagtgcctc
     1141 cgggtcaaaa tgcacatagg ctcccaccta tgtgacggtt agcgggactc gcctattcat
     1201 c
//