LOCUS KF741697 3830 bp RNA linear VRL 30-NOV-2014 DEFINITION Avian orthoreovirus strain 526 segment L2, complete sequence. ACCESSION KF741697 VERSION KF741697.1 KEYWORDS . SOURCE Avian orthoreovirus ORGANISM Avian orthoreovirus Viruses; dsRNA viruses; Reoviridae; Spinareovirinae; Orthoreovirus. REFERENCE 1 (bases 1 to 3830) AUTHORS Teng,L., Xie,Z., Xie,L., Liu,J., Pang,Y., Deng,X., Xie,Z., Fan,Q. and Luo,S. TITLE Direct Submission JOURNAL Submitted (17-OCT-2013) Department of Biotechnology, Guangxi Veterinary Research Institute, 51 You Ai Road, Nanning, Guangxi 530001, China FEATURES Location/Qualifiers source 1..3830 /mol_type="genomic RNA" /db_xref="taxon:38170" /strain="526" /segment="L2" /organism="Avian orthoreovirus" CDS 15..3794 /codon_start=1 /protein_id="AIS22905.1" /translation="MHVNGFDDATLSYAQSISGVIPMTNKLFEQASASIRALPRSHVY ALLDDVNFSVSCVIPNRIFHHSDHSEYFYIDAVNRVRRKQVIDADDVFVPNCNFQGLI SPMERLPNYGQLSEIISSNARDGLPSARVAATFYNISVSQARQIKAPLEAFLLPLLLS ETCPLSEDPCGLDTTASPPIHTNLALWVLREISRTICGTSKDRSPWLLLDSGVAWFMS PLMSSAIPPLMADLTNLAIYKQICSVSDELHSLAVQMVLQAAASQSYGHYILQTKSIF PQNTLHNMFRTLTDGIVPVIDWLEPRSNYRFMLQGARKVTSDDANQSPDNTDAAEQLG RKMGCLDVVRSLRKMSSSITVHSHDAMTFVRDAMSCTSGIFITRQPTETVLKEYTQAP TIEVPIPQSDWSPPIGSLRYLSDACSLPAAYLARAWRRAASAVVDNPHTWDPLYQAIL RSQYVTSRGGSGAALRDALKAAEVELPQYPGVSVKVATKIYQAAQTADVPFDKLSRAV LAPLSMGLRNQVQRRPRTIMPMNVVQQQISAAHTLSADYINYHMNLSTTSGSAVIEKV VPLGMYASCPPAQAVNIDIKACDASITYQYFLSVIVGAIHEGATGRRVSSSFMGVPPS VLSVVDASGVTSSVPISGFQVMCQWLAKLYQRGFEYQVTDTFSPGNIFTHHTTTFPSG STATSTEHTANNSTMMDGFLRSWIPASGASDVLKKFCKSISIQRNYVCQGDDGLMVVD GLSTGKLSGEIIDEFVKELRAYGKSFGWNYDIEFTGNAEYLKLYFLNGCRVPNVSRHP ICGKERASGDKLEMWPSTIDIFNGIFVNGVHDGLPWRRWLRYCWALALMYSGKIVRHD DSEVLIQYPMWSFVYWGLPPVSAFGSDPWIFSPYMPTGDHGFYSMLTLVRPLITESSP PSDASGLFGQCDHNVLFNSELVYQGYYMAQCPRQPSRSNRRDDPDSVQRFVKALESYL YISPELKSRVGLGRDRWQKLVGYTEKSPPSLDDVAFKWFRSAQEADLPTAIEIQAMDL SLLSARRRTYQGFSKLLNTYLRVTWDLTDPIDHAVDPRVPLCAGVSPSNSEPFLKLYS VGPMMQSTRKYFSNTLFIHRTVSGLDVDVVDRALLRLRALNAPDDVVVAQLLMVGLSE AEAATLAAKIRTMDINAVQLARVVNLSIPDSWMTMDFDRLIREIVSITPLTVRSLTTD LPSGVPWARAILQFLGAGVAMTAVGPVRRPYLHSVAGGMSSFIKQFRRWMRAETR" /product="lambda-B protein" misc_feature 51..3785 /db_xref="CDD:285203" /note="Reovirus RNA-dependent RNA polymerase lambda 3; Region: RdRP_5; pfam07925" ORIGIN 1 gctttttcct caccatgcat gtcaacgggt ttgatgatgc tactctctct tacgcacaat 61 ccatttcggg ggttattcct atgacaaata agttatttga gcaagcatct gcatcgatac 121 gtgccttacc ccgatcacat gtttacgctc tgttagatga tgtaaatttt tccgtttcat 181 gtgtgatccc gaatcgcatc tttcatcact ctgaccactc tgagtacttt tacatcgacg 241 cagttaatag agttagacgc aaacaagtta tcgatgccga tgacgtgttc gtcccgaact 301 gtaattttca aggtctcatc tctccaatgg agaggttgcc aaactatggt cagttatctg 361 agattatttc atcgaatgca cgtgatggcc tgccatccgc tcgcgtagcg gctacattct 421 ataatatttc tgtgtcccag gctcgtcaga ttaaggctcc actcgaagca tttttgttac 481 ccttgttgtt atctgagacc tgcccattgt cagaggatcc gtgcgggctt gacactacag 541 cttctccccc gattcataca aatctcgctt tatgggtgtt acgtgagatc agtcgaacca 601 tttgtggaac ttcaaaggat cgttctccat ggttattgct cgattctggt gttgcatggt 661 tcatgtctcc gttaatgtca tcagctattc cacctcttat ggccgacctg acgaatttgg 721 caatttacaa acagatctgt tctgtctccg atgagctgca ttctctcgcg gttcaaatgg 781 tcttgcaggc tgcagcgtca cagtcatacg gtcattacat attgcagaca aagtcaatat 841 tccctcagaa cacgttacac aatatgtttc gaacactcac tgatggcata gtcccagtca 901 tagactggtt ggagccacgt tcgaattacc gtttcatgct ccagggtgca cgtaaagtaa 961 cctcagatga cgcaaatcaa tctccggata atacggatgc agctgagcaa ctcggtcgta 1021 agatgggatg cctagatgta gttcgatctc tacgcaagat gtcctcatct atcactgttc 1081 attcacatga cgcaatgact ttcgtgcgtg acgctatgtc gtgtactagt ggtatcttca 1141 ttacgcgtca gcctactgag actgttctaa aagagtatac tcaggctccc actattgaag 1201 tccctattcc acagtcggac tggtcaccac ctattggatc tttacgatac ctttcagacg 1261 cttgctctct tcctgctgcg tacttagcta gagcttggcg acgagctgct tctgcagtgg 1321 tagacaaccc tcacacttgg gatcctttat atcaggctat ccttcgttct caatatgtaa 1381 catctcgtgg tgggtctggt gctgctctga gagatgcatt aaaggctgct gaagttgagc 1441 ttcctcaata tcctggggtc agtgttaagg tggctactaa aatttaccag gcagctcaga 1501 ctgcggatgt ccccttcgat aaattatctc gagccgtctt agctccactt tcaatgggtc 1561 tacgtaatca agtacagcga cgtccgagga ccattatgcc tatgaatgtc gttcaacaac 1621 agatttcagc ggctcacact ctctccgctg actacattaa ttatcacatg aatttatcaa 1681 cgacgtcagg tagcgctgta atagagaagg tagtcccgct aggtatgtat gcatcgtgtc 1741 ctcccgctca agcagttaat attgatatta aggcttgtga cgcttctatt acgtatcagt 1801 attttctttc cgttattgtt ggtgctattc acgagggtgc aacagggcgt cgtgtctcgt 1861 cttcatttat gggagtccca ccaagtgtgt tgtctgtcgt tgacgctagc ggggtaacgt 1921 cttcagtgcc tatttctggc tttcaggtta tgtgccaatg gttggccaag ctttaccagc 1981 gaggttttga atatcaagtt acggacacgt tttcgccagg taatattttt acacatcaca 2041 ctactacgtt tccctctggt tcaacggcga catctacgga acatactgcg aataacagta 2101 cgatgatgga cgggttcctt cgctcttgga ttcctgcttc tggtgcatct gatgtgttga 2161 agaagttctg taaatctatc tcaatacagc ggaactacgt ctgtcagggt gacgatggcc 2221 taatggtggt tgatggacta tcaacgggta aactatcagg tgaaataatt gatgaattcg 2281 ttaaagaact gcgagcttat ggtaaatcgt ttgggtggaa ctatgacata gaattcactg 2341 gaaatgctga atatttgaag ctatacttct tgaacggttg ccgtgtaccc aacgtctctc 2401 gacatccaat ctgcggtaag gagcgcgctt caggggacaa gttggagatg tggccatcta 2461 ctattgatat cttcaatggc atattcgtga acggcgtgca tgacggttta ccatggcgtc 2521 gatggttgcg ttattgttgg gctcttgctc ttatgtattc agggaagatc gtgcgtcacg 2581 atgattctga ggtgttaatc caatacccta tgtggtcctt tgtttactgg ggcttacctc 2641 ctgttagcgc tttcggttct gatccttgga tcttctctcc atacatgcct actggtgatc 2701 acggatttta ttccatgcta acgttagtgc gtcccttgat tactgaatca tctcccccat 2761 cagatgcttc tgggttattt ggccaatgcg atcataacgt tctgttcaat tctgaactgg 2821 tatatcaggg ttactatatg gcgcaatgtc cacggcaacc ctctcgttcg aatcgtaggg 2881 acgaccccga ttcggtgcaa cgttttgtta aagctctaga gtcctacctt tatatctccc 2941 ctgagctgaa atcacgcgtg ggactcggcc gtgatcgatg gcagaaattg gttggctaca 3001 cggaaaaatc tccaccttcg cttgacgatg ttgctttcaa gtggtttcgt agtgctcagg 3061 aagccgacct tccgactgct atcgaaattc aagccatgga tctgtcctta ttatctgcta 3121 gacgtcggac gtatcaggga ttttctaaac tcttgaacac ttacttgaga gtgacttggg 3181 atttgaccga tccaattgat cacgctgtag atccccgcgt tcccctctgc gctggtgtgt 3241 ccccgtcgaa tagcgagccg tttttaaagt tatactctgt tggcccaatg atgcaatcga 3301 cacgtaaata tttcagtaat actctattta tccaccgtac tgtatctggt cttgacgtcg 3361 atgtcgtcga tcgtgctctt ctgaggttgc gtgctcttaa tgcgcctgat gatgtggttg 3421 tagcccagct cctcatggta ggtctgtctg aagccgaagc ggccacgttg gcagcgaaga 3481 tacgaacgat ggatatcaac gctgtgcagt tggcgcgagt cgtcaattta tctatccctg 3541 attcgtggat gactatggac ttcgatcgtt tgatacgaga gatagtgtcc atcactcctt 3601 tgactgtccg ctccttgacc actgatctgc cttctggtgt tccctgggct cgtgcgatac 3661 tgcagttctt aggtgcgggt gttgctatga ccgccgttgg ccccgtgcgt cgtccctatc 3721 tgcactcggt agctggaggc atgtcgtcat tcattaagca gttccgccgg tggatgcgtg 3781 ccgaaacgag gtagcgtccg tgctcggcat ggctcgagga attactcatc //