LOCUS KF741698 3907 bp RNA linear VRL 30-NOV-2014 DEFINITION Avian orthoreovirus strain 526 segment L3, complete sequence. ACCESSION KF741698 VERSION KF741698.1 KEYWORDS . SOURCE Avian orthoreovirus ORGANISM Avian orthoreovirus Viruses; dsRNA viruses; Reoviridae; Spinareovirinae; Orthoreovirus. REFERENCE 1 (bases 1 to 3907) AUTHORS Teng,L., Xie,Z., Xie,L., Liu,J., Pang,Y., Deng,X., Xie,Z., Fan,Q. and Luo,S. TITLE Direct Submission JOURNAL Submitted (17-OCT-2013) Department of Biotechnology, Guangxi Veterinary Research Institute, 51 You Ai Road, Nanning, Guangxi 530001, China FEATURES Location/Qualifiers source 1..3907 /mol_type="genomic RNA" /db_xref="taxon:38170" /strain="526" /segment="L3" /organism="Avian orthoreovirus" CDS 13..3870 /codon_start=1 /protein_id="AIS22906.1" /translation="MAQIRGLRLSTTLSAPPSRKVLTSHTYDELISALKLTAKPWRPL KSKDRNSITAVQLLFPLNGYIEPMFILEKDMSYEDFESWLSPLLSALADQLLRRYPIA SHHGRLINPLLSNAIVAAFLSNVPYLHALDHLFIIRGAIEDILDVGLSIQNHLWYDRS ALVTPAGQKFIQLSGYQFSSQDPCLFSKQLRCYGLVYYFLDMSDCVSYCQRHLSNSTP LIHFDRPSNGVHCLVPSESTTPIAGSLSVSALSSILLESCIQQSLLNTRTPTGSPVVR QVEVLLPISSPFFERQNTLEYSLFALSNALVNGYQLIDLQPSHPDCATVAAILARLID FSKGITTIRPSPAQFNIYADSPLTYSGENANFIRRLPCASGNSIGPVVVGKTVDRAIG WMPQFDPASSYNPDLAMDSLSRATTLPLRAKFSPFWSGSALFSYASCDRKNGIYDVSF MSQFPSLYFSDDDTAARARFSSYRAVKDRSLMKDTANLLYISNLSSSHDHRLIPDSKT MVYVGASGTHVDNQPSVIKPLMNGSLPGVFKPLSVKQIGWEVTNGTICDIELPLATGT FFFVYSDVDQVQAGDSDLDASSRRFCSQLDMLIKLTYTGGSVVAKCNFPTNLVWRHLF TTVSPYFSSIHLLKPLVANNLELYILLAEKLPVPDASFLPSADMVVFWRSQIQRYRTL RDSFAVVPSIDSTLSLEDSLTVSVLNFVDVTSLSSVEDQRALAAFSVITSLGSQKLSI HPYFDSYRTQLIGVITPHSRNVLDRLAYIPRVFPSTIDVQHRVMSSSDPEIFGFRSTY WTQLSFFYDTALMQMDFTEARHWLDLGTGPEARPLTFLPSDLPVTLCDTRPFIFPSGC WATFTDFLSYNYLTTNVILSTGADVVSCVLTLGAACADANMTLHEGVRQIVSQCVDAN VKTLFLQLNCPLPSAGDVPRDVLELVQTNSTYIFHSLGRVEPFIPYSALLEIVEDLCP GIVVEIKTMDPSLSWLNYAVHSNAAVSSDDIVLAMRLSHFCPLFVFHLNRHSADFPDD ARVGSPFTILLSNYEDTSSYEVTLDNVTIATITAGSLVGFSSGVQVAPNGDRLTLTIN SASPGILSIVQVLPVRISLGSCVIEAPDPSLSLIFPAKLDTSLSGTDLELFLSDWYDV ALFYIDEANSRLLPVSDTKYEIYRKDQTPNSRTINYIFDRSDVFFKIVLCDVSPSGVG RFIYRELPELSSPVWPDDVRTFLSLPFDSPMVIISPDGPVNYDGATVTPPTSWLTVDG STCVVDGRPSFFVPPGRYGLVRV" /product="lambda-C protein" misc_feature 13..3861 /db_xref="CDD:283634" /note="Reovirus core-spike protein lambda-2 (L2); Region: Reovirus_L2; pfam06016" ORIGIN 1 gcttttccac ccatggctca gattagaggc cttcggttgt caacgacgct ctcagctcct 61 ccttcacgga aagttttaac ttcacacaca tatgacgagc taatatctgc gttaaagctg 121 actgctaaac catggcgacc gcttaagtcc aaggatcgga attccatcac tgcggtacaa 181 ctcctattcc ccctcaatgg atatatcgaa ccgatgttta tactggaaaa agatatgagc 241 tatgaggatt tcgagtcttg gttgtcacct ctactttcag ctctggcaga tcaactgcta 301 cggcgttatc ctattgcgtc tcaccatggg cgactgatta atccgttgct ttccaatgcc 361 atcgtcgcag catttctatc gaatgtccct tacttgcacg ccttagatca tctctttatc 421 atccgtggcg ctattgagga cattttggat gttgggcttt ccattcagaa ccatctgtgg 481 tatgatcgta gtgctcttgt aacgccagct ggtcagaagt tcatccaatt gtccggttat 541 cagttctcct ctcaagatcc ttgtctgttt tcaaagcaac tgcgttgcta tgggctcgtc 601 tactactttc tagacatgtc ggattgcgtt tcgtattgtc agcgacatct ctccaattct 661 actcctctta tccacttcga tcgcccatct aatggcgttc attgtttggt tccttctgaa 721 tccacaactc cgattgcggg ttccttatct gtgtcggcac tcagttctat cttgcttgag 781 tcttgtattc aacagtctct tctgaatact cgaactccta ccgggagtcc ggttgtgagg 841 caagtcgagg tgttgttacc tatttcgtcc cctttctttg agcgtcaaaa tactttggag 901 tactccttat ttgcgctctc caatgcactg gttaatggct atcagctaat agacttgcaa 961 ccgagtcacc cggactgcgc gactgtagct gctatcttag ctagactgat tgatttttcg 1021 aagggcatta ctaccattcg accatctccc gcacagttta atatctatgc tgatagtcca 1081 ctgacttata gtggtgagaa cgctaacttt attcgacgct taccctgtgc ttctgggaat 1141 tctattggcc cagttgttgt cggcaaaact gttgaccgcg ctattggttg gatgcctcag 1201 tttgatcccg cttcttctta caatcctgac ttggctatgg attccctatc tagagcgacc 1261 acgctacccc ttcgcgcaaa attttctccc ttctggtccg gttcagcctt attttcctac 1321 gcttcttgcg atcggaagaa tggtatctat gacgtctctt tcatgtctca atttccatct 1381 ttatacttca gtgatgatga cacagccgct agagcacgat tctcttctta tcgcgccgtt 1441 aaagacagat ctttaatgaa ggacactgcc aacttattgt acatctcaaa tttgtctagt 1501 tcacatgatc atcgccttat cccagattcg aagactatgg tgtacgttgg ggcttcgggt 1561 acgcacgtgg ataatcagcc atctgtcatc aagcctctaa tgaacggatc acttccgggc 1621 gtctttaaac ccctctctgt aaaacagatt ggatgggagg tgactaatgg cactatttgc 1681 gacattgagt taccactcgc gacgggtacg tttttcttcg tgtacagtga cgtcgatcag 1741 gtccaggctg gtgactccga tcttgatgct tcttcccgcc gcttctgctc tcaattggat 1801 atgcttatta aattgacata tacaggtgga tccgtagttg ctaaatgtaa ctttccaact 1861 aatctcgttt ggcgacatct ctttacgact gtttctccgt atttttcttc catccatctg 1921 ctaaaaccgc tcgttgccaa taatttagag ttgtatatcc tattggctga gaagctgccg 1981 gttcctgacg cgtccttcct cccctctgcg gatatggtcg ttttttggag atcgcaaatt 2041 caacgttatc gtactttacg cgattccttc gctgtggttc cttcgatcga ctctactctt 2101 agcttggaag attctctaac tgtctctgtt ttgaattttg ttgatgtgac ttctctctca 2161 tctgtggaag atcaacgtgc cttagctgcc ttttcggtaa ttacctcatt agggtctcag 2221 aaactgtcaa ttcaccctta ttttgatagt tatcgtactc agctgatcgg ggtcattact 2281 ccccactctc gtaacgtatt ggataggctg gcgtacatac cacgcgtgtt tccctctacc 2341 atcgatgtcc aacatcgcgt catgtcatcg tctgatcctg agatcttcgg tttccgctct 2401 acctattgga ctcaactttc attcttttat gacactgcac tgatgcagat ggacttcact 2461 gaagcgagac attggcttga cttagggaca gggcctgaag ctaggccttt aactttcttg 2521 ccctctgacc ttcccgtcac attgtgtgat actcggcctt tcatttttcc ttctggttgc 2581 tgggccacgt tcacggattt cctcagttat aattacttaa ccacaaatgt tattctctcg 2641 acaggagccg atgttgtatc ttgtgttctc accttaggtg ctgcttgcgc cgacgcgaac 2701 atgacgcttc atgagggagt tcgccagata gtttcacagt gcgtggatgc taatgttaag 2761 acgctcttct tacagcttaa ttgtcctctg ccttctgccg gtgatgtgcc ccgtgatgtt 2821 ctggagctgg tacagactaa ttcgacttat attttccatt cattgggtcg cgtcgagccg 2881 tttatccctt actccgctct tcttgagatt gtggaggact tatgcccggg catcgttgta 2941 gagattaaga cgatggatcc atctctttcg tggctcaatt acgctgtgca ttctaatgca 3001 gccgtctctt ccgatgatat agtgttggct atgcgactgt ctcacttctg tcccctattc 3061 gtatttcatt tgaaccgtca ctctgctgat tttccggacg atgcgcgcgt tggctctccc 3121 tttacgattt tactgtctaa ttatgaagac acgagctcgt atgaggttac tctagataac 3181 gttacgattg ctactatcac tgctggatct ctagtaggtt tttcgtcggg tgtccaggtc 3241 gctccaaacg gtgatcgact cactttaact ataaactctg ccagtcctgg aattctgtct 3301 attgttcagg tgctccctgt gcgtatctct cttggtagct gtgtgataga ggccccggac 3361 ccttcactat ctttgatttt cccagccaaa ttggacacat ctctctcggg cacagacttg 3421 gaattgttct tatccgattg gtatgatgtc gctttattct atattgatga agctaattct 3481 cgtctattac cggtatccga taccaagtac gagatttata gaaaagatca aactccaaat 3541 tctaggacga tcaattacat cttcgatcgc tcagatgttt tcttcaaaat agtgctgtgt 3601 gatgtttctc catcaggagt tggccgattc atttatcgtg agctacctga gttaagttca 3661 cctgtgtggc ctgatgacgt tcgcactttc ctatctctac ccttcgattc tccgatggtc 3721 attatctctc ctgatggccc tgtgaactat gatggcgcga ccgtgacgcc cccaacatct 3781 tggttgacgg ttgacggtag tacgtgcgtt gtcgatggtc ggccttcatt ctttgtgcct 3841 cccggtagat atggcttggt gagagtctaa acgaccgcgg gcctccagta aaagggtgtt 3901 attcatc //