LOCUS       KF741703                1324 bp    RNA     linear   VRL 30-NOV-2014
DEFINITION  Avian orthoreovirus strain 526 segment S2, complete sequence.
ACCESSION   KF741703
VERSION     KF741703.1
KEYWORDS    .
SOURCE      Avian orthoreovirus
  ORGANISM  Avian orthoreovirus
            Viruses; dsRNA viruses; Reoviridae; Spinareovirinae;
            Orthoreovirus.
REFERENCE   1  (bases 1 to 1324)
  AUTHORS   Teng,L., Xie,Z., Xie,L., Liu,J., Pang,Y., Deng,X., Xie,Z., Fan,Q.
            and Luo,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-OCT-2013) Department of Biotechnology, Guangxi
            Veterinary Research Institute, 51 You Ai Road, Nanning, Guangxi
            530001, China
FEATURES             Location/Qualifiers
     source          1..1324
                     /mol_type="genomic RNA"
                     /db_xref="taxon:38170"
                     /strain="526"
                     /segment="S2"
                     /organism="Avian orthoreovirus"
     CDS             16..1266
                     /codon_start=1
                     /protein_id="AIS22913.1"
                     /translation="MARAVYDFFSTPFGNRGLATNRIQLSSLLSSSNSPWQRFLSSMT
                     PLTAPGIVSTPEAPYPGSLMYQESMLHSATVPGVLGNRDAWRTFNVFGLSWTDEGLSG
                     LVAAQDPPPAAPYQPASAQWSDLLNYPRWANRRRELQSKYPLLLRSTLLSAMRAGPVL
                     YVETWPNMISGRLADWFMSQYGNNFVDMCARLIQSCSNMPIEPDGNYDQQMRALISLW
                     LLSYIGVINQTNTISGFYFSSKTRGQALDSWTLFYTTNTNRVQITQKHFAYVCARSPD
                     WNVDKSWIAAANITAIVMSCRQPPTFANQGVINQAQSRPGFSMNGGTPVHELNLLTTA
                     QECIRQWVVAGLVSAAKGQALTQEANDFSTLIQADLGQIKAQDDALYNQQPGYARRIK
                     PYVNGDWTPGMTAQALAVLATFTA"
                     /product="sigma-A protein"
     misc_feature    118..1251
                     /db_xref="CDD:281127"
                     /note="Reoviral Sigma1/Sigma2 family; Region: Sigma_1_2;
                     pfam03084"
ORIGIN      
        1 gctttttctc ccacgatggc gcgtgccgta tacgacttct tttctacgcc tttcgggaat
       61 cgtggtctag cgacgaatcg tatccaattg tcatcactac tatcgagctc gaattcccca
      121 tggcaacgat ttctatcatc aatgactcca ttgacggcgc caggtatcgt ctcaacacct
      181 gaggcacctt atccaggctc attaatgtat caggaatcta tgctacacag tgccactgtt
      241 cctggagtac tcggtaatcg tgatgcttgg cgtacattta atgtttttgg gctttcatgg
      301 actgatgaag gactgtcagg actagtagct gcccaagatc ctcctcccgc cgccccgtat
      361 cagccagctt ccgctcagtg gtcggacctt ctcaactacc ctagatgggc caacagacgt
      421 cgtgagctgc aatctaagta tcctcttctg cttcgatcca cgctgctttc cgctatgcga
      481 gctggtcctg ttctttatgt tgagacgtgg ccgaatatga tctcagggcg actagctgac
      541 tggtttatgt cccaatatgg caacaatttc gttgacatgt gtgctaggtt gatccagtct
      601 tgttcgaaca tgcccattga gcctgatgga aattatgacc agcagatgcg tgctttgatt
      661 agtttgtggc ttctttcata cattggggta atcaaccaga ctaacaccat cagcggcttc
      721 tacttctcct cgaagactcg gggtcaagcg ttagacagtt ggactttatt ctatacgaca
      781 aacactaatc gtgtccaaat tacgcagaag catttcgctt acgtatgcgc gcggtctcct
      841 gattggaatg tggataaatc gtggatcgct gcggcgaaca taaccgctat cgtcatgtct
      901 tgccgtcaac cgccgacgtt tgccaatcaa ggtgttatca accaggcgca gagccgacct
      961 ggcttttcca tgaatggagg gacgcccgtc catgagctca acttactgac taccgcgcag
     1021 gaatgcatcc ggcagtgggt ggttgctggt ttggtgtcag cagcaaaggg gcaagcatta
     1081 acgcaggagg ctaatgattt ctcaaccctc atccaggcag atctaggaca gatcaaggcg
     1141 caggatgatg cactgtacaa ccaacagcca ggatacgcaa ggaggataaa accttatgtt
     1201 aatggtgact ggaccccagg tatgactgcg caagctctgg ccgttctagc cacttttacc
     1261 gcctaggcgt agggtcgtac gctgcccgag tccagccctc cggcagcacg tggatgtatt
     1321 catc
//