LOCUS       KX398256                2109 bp    RNA     linear   VRL 23-NOV-2016
DEFINITION  Avian orthoreovirus strain 878-Bi-05 outer shell gene, complete
            cds.
ACCESSION   KX398256
VERSION     KX398256.1
KEYWORDS    .
SOURCE      Avian orthoreovirus
  ORGANISM  Avian orthoreovirus
            Viruses; dsRNA viruses; Reoviridae; Spinareovirinae;
            Orthoreovirus.
REFERENCE   1  (bases 1 to 2109)
  AUTHORS   Farkas,S.L., Marton,S., Dandar,E., Kugler,R., Gal,B., Jakab,F.,
            Balint,A., Kecskemeti,S. and Banyai,K.
  TITLE     Lineage diversification, homo- and heterologous reassortment and
            recombination shape the evolution of chicken orthoreoviruses
  JOURNAL   Sci Rep 6, 36960 (2016)
   PUBMED   27830770
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2109)
  AUTHORS   Farkas,S.L., Marton,S., Dandar,E., Gal,B., Balint,A.,
            Kecskemeti,S. and Banyai,K.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-JUN-2016) Pathogen discovery, Institute for
            Veterinary Medical Research, Centre of Agricultural Research,
            Hungarian Academy of Sciences, Hungaria krt. 21., Budapest, Pest
            1143, Hungary
COMMENT     ##Assembly-Data-START## Assembly Method :: CLC Bio software v.
            7.0.4 v. v. 7.0.4 Sequencing Technology :: IonTorrent
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..2109
                     /mol_type="genomic RNA"
                     /country="Hungary"
                     /collection_date="2005"
                     /host="Gallus gallus"
                     /db_xref="taxon:38170"
                     /strain="878-Bi-05"
                     /organism="Avian orthoreovirus"
     CDS             30..2060
                     /codon_start=1
                     /protein_id="APD15403.1"
                     /translation="MGNATSVVQNFNIQGDGNHFAPSAETTSSAVPSLSLNPGLLNPG
                     GKAWVLIDPSLNASDPSSLRLMTSADLSTLPQSATSNSTGFLPTSGMYAVATKETLSV
                     ITEHAISQFDKLQMACELDRDYLDARGVSPESVNIHSYIAYVDCFVGVSARQAASNFK
                     QHVPVITKSRMTQFMTSAQNMLQVLGPWERDVRELLTILPTSTTAGKITCDMKSVVAF
                     VDDQLSDTSLCRLYPDCAAAAVARRNGGIRWKTPDTDEAPSLATNDIAASTMGTLANT
                     TPLAEKSNSGEESMRLVSDVGVDIVCSRSPISSSVWSRTVEPKSYNIRTLRVEEALWL
                     RECQATTGFDVQYTLPDQTTHKHFWLQKGSVVINLEQTGSMMFDVNIAGKDYKKGTFN
                     PDNRKLVLLVMQSKIPFESWTVASQITGVAQVAEVTVHAADSSTPNQKIIGETSLSYL
                     FERETVTTSNTEVNTYLLCTWQLDDEQSNDTNVWPDAWDGITTLTPLTSGTVTIKGTS
                     VDSVVPSDLVGAYTPEALAAALPNDAGLILANKATKLADAIKKEDDSVIDESSPFSTP
                     IQGVLAVQQLDTVGTHGIRALQPPSILKRIASRALHMFLGDPKSILKQATPVLRDPDV
                     WTGFVQGVRDGIRTKSLSAGVRSVYNNVTATQSVQTWKQGFLTKIQTLFKPS"
                     /product="outer shell"
ORIGIN      
        1 gctttttcag tgccaatctt tctcacaaga tgggtaacgc gacgtctgtt gtgcagaatt
       61 tcaatatcca aggtgatggt aatcattttg ctccatctgc tgagactact tcatccgccg
      121 tgccgtcatt atctttgaat cccggactgt taaatccagg tggtaaggcg tgggttctaa
      181 tcgatccttc tctaaatgct tccgatcctt cctccctacg tttgatgact tcggctgatc
      241 tgtcaacact tccccagtct gctactagta actctactgg gttccttcca acttctggta
      301 tgtatgccgt cgctactaaa gagacgttga gtgtaatcac tgagcacgcg atttcccaat
      361 tcgataaatt gcagatggct tgtgagttgg accgcgatta tctggacgct agaggtgttt
      421 cccctgagtc tgtgaatatt catagttata tagcatatgt tgattgcttc gtgggtgtat
      481 ctgcaaggca agctgcgtca aactttaagc aacacgtgcc agttattact aaatctcgca
      541 tgacacaatt catgacatcc gcgcaaaata tgttgcaagt actcggacct tgggagcgtg
      601 atgttcgtga gttactcact attcttccta cctctactac cgctggcaaa attacgtgcg
      661 atatgaagtc tgtcgtcgct tttgttgatg atcagctttc tgataccagt ttgtgtcgtc
      721 tgtatcctga ctgtgctgct gcggcagtgg ctagacgtaa tggtggcatt agatggaaga
      781 cacctgatac tgacgaagct ccttcgcttg caactaacga cattgctgcc tcaactatgg
      841 gtacgcttgc gaatactaca ccactggctg agaagtcgaa ctcgggcgag gagtcgatgc
      901 gcttagtgag tgacgttggt gtggacatcg tctgttctcg tagccctata agttcttcag
      961 tttggtcacg cacggttgaa cccaaatcgt acaatattag aacccttcgt gtagaagagg
     1021 cgctttggtt acgtgagtgc caggcgacta ctggatttga tgtacagtac acactgcctg
     1081 atcagactac acataagcat ttctggcttc agaaagggtc agttgtcatc aatcttgagc
     1141 aaacgggcag tatgatgttt gatgtgaaca tagcgggtaa agattataag aagggtacct
     1201 ttaatcccga taatcgcaag ttggtccttt tggtcatgca gtcaaagatc cctttcgagt
     1261 cttggactgt cgcttctcag attactggcg tcgctcaagt ggctgaggtc actgtgcatg
     1321 ctgctgatag ctcgactcct aaccaaaaga taataggtga gacttcgcta tcttatttgt
     1381 ttgagagaga gacagtgacc acatcaaaca ctgaagtcaa tacatacctc ctgtgtactt
     1441 ggcaacttga tgacgaacag agcaatgata caaacgtctg gccagatgca tgggatggga
     1501 tcacaacatt gactccgctt acttccggta ccgtgaccat caaggggacc tcggtggatt
     1561 ccgtcgtacc gtctgattta gttggcgctt atacacctga ggctttggct gccgcgcttc
     1621 ctaacgacgc tgggttaatt ctggctaata aggcaactaa actggctgac gctatcaaga
     1681 aagaagatga ctctgtgatt gatgagtctt ctccttttag tactcccatt caaggggtcc
     1741 tggctgttca acaacttgat accgtcggga cgcatggtat acgtgcactc cagcctcctt
     1801 ccattctgaa acgcatcgct tcacgagctc ttcatatgtt tctcggtgat ccgaagtcta
     1861 ttctgaagca agcgacgcca gtattgagag accctgacgt ttggactggt tttgtccaag
     1921 gcgttagaga cggcatccgg actaagtcgc tatccgctgg agtacggtct gtgtataata
     1981 acgttaccgc cactcaatcc gtgcaaacgt ggaagcaggg gttcctgacg aaaatacaga
     2041 cgttgttcaa gccatcgtga ggtgctaagg cctctctctg cggcgggtcg gtgggcacgt
     2101 cgtggtgac
//