LOCUS AY573911 1996 bp mRNA linear VRL 10-APR-2006 DEFINITION Avian orthoreovirus strain 918 nonstructural protein mRNA, complete cds. ACCESSION AY573911 VERSION AY573911.1 KEYWORDS . SOURCE Avian orthoreovirus ORGANISM Avian orthoreovirus Viruses; dsRNA viruses; Reoviridae; Spinareovirinae; Orthoreovirus. REFERENCE 1 (bases 1 to 1996) AUTHORS Su,Y.P., Su,B.S., Shien,J.H., Liu,H.J. and Lee,L.H. TITLE The sequence and phylogenetic analysis of avian reovirus genome segments M1, M2, and M3 encoding the minor core protein muA, the major outer capsid protein muB, and the nonstructural protein muNS JOURNAL J. Virol. Methods 133 (2), 146-157 (2006) PUBMED 16337282 REFERENCE 2 (bases 1 to 1996) AUTHORS Su,Y.P. and Lee,L.H. TITLE Direct Submission JOURNAL Submitted (15-MAR-2004) Veterinary Medicine Department, National Chung Hsing University, 250 Kuo Kuang Road, Taichung 402, Taiwan R.O.C. FEATURES Location/Qualifiers source 1..1996 /mol_type="mRNA" /db_xref="taxon:38170" /strain="918" /segment="M3" /organism="Avian orthoreovirus" CDS 25..1932 /codon_start=1 /protein_id="AAS78994.1" /translation="MASTKWGDKPMSLSMSHDGSSIRSAASQFLSVPLSHSTPIPPQR KTVLLKFMIGDDLVTVQGTLAPFDEYWYDNQPLLSQAVELLASEDRLRQFEHHEKFLL KKGHQISEIMNRLRLFFNDVLKVKMEADALPSLAQYLMAGTLDAVSAVHEPDACVPVT SKIIAKQQTASKSPGRLDEEEYNTIRSRFLTHEVFDLTSDLPGVQPFMDMYYATVPRA DSTGWCVYRRKGLLIHAPDEQYSDLTIFATRLTAARELQLVAGEIIVACFDLMDISDI APSHHASVQEERTLGTSKYSNVTANEHPLVFFSPNALRWAIDHACTDSLISARNIRVC VGIDPLVTRWTRDGVQEAAILMDDKLPSAGRARMALRTLLLARRSPMTSFLLGALKQS GGQLMEHYRCDAANRYGSPTIPVSHPPPCSRCPELKEQITRLSSAPAPKIDSSAGPAV LLSKIAELQRVNRELSLKLVDVQPAREDHLLAYLNEHVCVNAKDHEKGLLARCNISSD SVAAVLGQRLKNRERFETRLRHEAGAEWEPRVEALNQELAKARIEQQDMMTQSLQYLN ERDELLHEVDELKRELAALRSANVRLNADNHRLSRATRVGDVFVSDVDPLPPGLPGES KPSIEELVDDL" /product="nonstructural protein" /note="mu-NS" ORIGIN 1 gctttttgag tcctaacgtg gatcatggcg tcaaccaagt ggggagacaa gccgatgtcg 61 ctctcaatgt ctcacgatgg atcatctatc cgcagtgccg cctcacaatt tctgtcggtt 121 cccctgtctc actcaacgcc catcccacct caacggaaga ccgtgttgct gaaattcatg 181 attggagatg atttggttac cgttcagggt acgctcgctc cttttgatga gtattggtat 241 gataatcagc ctttactgtc tcaggctgtt gagctacttg cttctgagga tcgtctgcgt 301 caattcgagc atcatgaaaa atttctactt aagaagggcc atcaaatatc tgaaatcatg 361 aatagactac gtcttttctt taatgacgtt ctcaaagtga agatggaagc tgatgctctt 421 ccttctctgg ctcaatacct tatggccgga acgttggatg ccgtctctgc tgtacatgaa 481 cctgatgctt gtgttccagt tacttcgaag atcatagcta agcagcagac tgcctccaag 541 tctcccggac gtcttgatga agaggagtac aatactatta gatcacgttt tctcacgcat 601 gaggtctttg acttaacgtc tgacttgcct ggggtgcaac cgtttatgga catgtaytac 661 gccactgttc cccgtgctga ttccaccggt tggtgcgtct accgccgaaa gggtttgcta 721 attcatgctc cggatgagca atattcggat ctgactattt tcgctacccg tcttacggca 781 gcgcgtgagt tacagctcgt ggctggggag attattgtag cctgtttcga ccttatggat 841 atttctgaca ttgccccatc tcatcatgcg tcggttcagg aggagcgtac tctcgggacc 901 agtaagtatt caaacgtcac agctaatgag catcctctgg tattcttctc acccaatgca 961 ctacgttggg caatagacca tgcttgtact gattccttaa tttccgctag gaatattcgg 1021 gtttgcgttg gtattgaccc actagtgacc agatggaccc gcgatggtgt gcaggaggct 1081 gctattctta tggatgacaa actgccctca gcaggtcgtg ctcgtatggc tctacgaacg 1141 cttctcctag ctcgtcgttc accgatgacg tccttcttac taggtgctct caagcagtct 1201 ggtggccaat taatggagca ctaccgatgc gatgcggcta acagatatgg atcgcccacc 1261 attccagtct ctcaccctcc accatgttca agatgtcctg agttgaagga acagatcacc 1321 aggctttcat cggctcctgc acccaagatc gactcatctg ctggtccagc cgtgctgttg 1381 tcgaaaatcg ccgagcttca gcgcgttaac agagagctgt ccttgaagtt agtggacgtt 1441 cagccagccc gagaagacca ccttctggct tacctcaatg agcatgtgtg tgtcaacgcc 1501 aaggatcatg agaaaggttt actcgctcgc tgcaatatct cgagtgactc agtcgctgcc 1561 gtccttggtc aacgtttgaa aaatcgagaa aggttcgaaa cgagactacg gcatgaggct 1621 ggtgctgaat gggagccgcg cgtggaagcg ttaaatcaag agctagctaa ggcacgtatc 1681 gagcaacaag atatgatgac tcagtcatta cagtacctaa atgaacgtga cgaactgcta 1741 cacgaggtgg atgagctgaa acgtgaattg gccgccctgc gatctgctaa tgtgagacta 1801 aatgccgata accaccgtct gagccgtgca actcgtgttg gagatgtatt cgttagtgac 1861 gttgatcctt taccacccgg ccttcccggt gagtcgaaac cgtccatcga agaactggta 1921 gatgatctgt gagctttgac ctgtgactcg acttctctct gattccatgt acccacggcg 1981 gactcggtta ttcatc //