LOCUS       AY639617                2199 bp    RNA     linear   VRL 10-APR-2006
DEFINITION  Avian orthoreovirus strain 918 segment M1 muA gene, complete cds.
ACCESSION   AY639617
VERSION     AY639617.1
KEYWORDS    .
SOURCE      Avian orthoreovirus
  ORGANISM  Avian orthoreovirus
            Viruses; dsRNA viruses; Reoviridae; Spinareovirinae;
            Orthoreovirus.
REFERENCE   1  (bases 1 to 2199)
  AUTHORS   Su,Y.P., Su,B.S., Shien,J.H., Liu,H.J. and Lee,L.H.
  TITLE     The sequence and phylogenetic analysis of avian reovirus genome
            segments M1, M2, and M3 encoding the minor core protein muA, the
            major outer capsid protein muB, and the nonstructural protein muNS
  JOURNAL   J. Virol. Methods 133 (2), 146-157 (2006)
   PUBMED   16337282
REFERENCE   2  (bases 1 to 2199)
  AUTHORS   Su,Y.P., Su,B.S. and Lee,L.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-MAY-2004) Veterinary Medicine, National Chung Hsing
            University, 250 Kuo Kuang Road, Taichung 402, Taiwan
FEATURES             Location/Qualifiers
     source          1..2199
                     /mol_type="genomic RNA"
                     /db_xref="taxon:38170"
                     /strain="918"
                     /segment="M1"
                     /organism="Avian orthoreovirus"
     CDS             1..2199
                     /codon_start=1
                     /protein_id="AAV49518.1"
                     /translation="MAYLATPVLGVGSRITALDRTLDAITLKPRIDLQDVYTIDPTLT
                     LRQIELISSGTSMDDIARGLLHRDWRRQSTIVLLPSRRSLLEYLLSNPSACPDGLDRS
                     RLKGFQKRPNDFRVQDFFSPLITDSTSISTYSRWLNAHPTVYSTTHKVAGARVRLFGP
                     AKLYILSPDVLRELSILKSTDRIIVVPTARVYVGCFPSASTSNCVLSARERWNAPDVH
                     PVVKAIQLAYDHQYRVTARYLSDPLISALLLGNRSVKTLKVQPVEARAARSVGIRVQA
                     MTPPRGINTSIIQVVDLRLQCRHSLIPTERPFPLTFIGLPSCLLQHLDLTLSDDWVPI
                     RDHTGMFEMWFMILTLTCDKILDGRGNAVFLIPSSTNALSINYVQLTSTASPRPQSLA
                     ANASGRIDSIGLCMPKGSFKSTMIKFLTGLEICGTRVMYSDVVMDSDDVGDALDPTFE
                     TALYDALLALDPPFDVDKLASPTDLVNQEYVASHMYPTFLRLVNELLTPKASELYSER
                     SVEFRSLTYAHADSEFLNACWTARLMRCFINYHEEQNILLRPGRVGGVLFQVALSRCY
                     KMFATSTPASPLSLFLKSLFVPWIESAPLLASLTPNESSRVLAWYIPSSYWSDNGWCT
                     CDTHRHVTFSFIRGLPTDLSVLDLFDWSRFRATINVDTSLVELGADIRAVKVSVHWTS
                     QKPTVDVFDNRALFTPFQHYHLSLHCNCAPGRPFFAKNMKLYLSTVGGEH"
                     /product="muA"
                     /note="structural protein"
ORIGIN      
        1 atggcctatc tagccacacc tgtgctagga gtcggttctc gcattaccgc cttagatcgc
       61 actctcgatg ctattacgtt gaaacctcga atcgacctcc aagatgtgta tacaatcgac
      121 cccacgttga cattgcgtca gatagagtta atctcatctg gaacttcaat ggacgacatc
      181 gcccgtggat tattgcatcg ggactggcgt cgccaatcca ccattgtctt gcttccttct
      241 cgtcgctctc tccttgagta tctattgtct aatccttccg catgtccaga cggtttagat
      301 cgatctcgcc tcaaaggatt tcaaaagcgt ccaaatgatt tccgtgtcca agatttcttt
      361 tctccactga ttacggactc tacgtcgatc tctacttact ctcgatggct caacgctcat
      421 cccactgtgt actcgactac tcacaaggtc gctggtgctc gggtgcgtct cttcggacct
      481 gccaagttat acattctgtc gcctgacgtt cttcgtgaac tatccatttt gaaatccact
      541 gatcgcatca tcgttgtccc cacagcacgt gtatacgtcg gttgttttcc cagcgcttcc
      601 accagtaatt gtgtactttc cgcgcgcgaa cgctggaatg cccctgatgt tcatcccgtc
      661 gtcaaagcaa tccaattagc ctatgatcat caatatcgcg tcactgctcg ctatctttcc
      721 gatcctctta tctcagctct tcttcttggg aatcggtcgg tgaagacgtt gaaggtacag
      781 ccggtggaag ccagagccgc acggtcagtt ggcattcgcg ttcaagcaat gacacctcct
      841 cgtggtatta acacttcaat tatccaagtc gttgatctta ggttgcaatg tcggcattcc
      901 cttattccca ccgaacggcc atttccactg acgtttatcg gtctcccatc ttgtttactt
      961 caacatttag acttgacact atcggatgac tgggtgccca ttcgtgatca tacaggtatg
     1021 ttcgaaatgt ggtttatgat tcttacgctc acttgtgaca agatccttga tggacggggg
     1081 aacgccgttt ttcttattcc cagctctacg aacgctttat caattaatta tgtacagctc
     1141 acgtcgaccg cgtctccacg tcctcagtcg ctagccgcta atgcatccgg acgcatcgat
     1201 tctattggac tgtgcatgcc caaagggtct ttcaagtcaa ctatgattaa gtttctcact
     1261 ggattggaga tttgcggcac gcgagtgatg tactcagacg tcgtaatgga tagtgacgat
     1321 gtgggtgatg ctttggatcc tacctttgag actgctttgt acgatgcgct gctggctctc
     1381 gatcctccct tcgacgttga caagttggct agccccactg acttggttaa ccaagagtat
     1441 gttgcatctc acatgtaccc gacattctta aggcttgtca atgagttgct gacgcccaag
     1501 gcttcagaat tatactcaga gcgtagtgtt gaattccgct ctctcactta cgcgcatgct
     1561 gattctgaat ttcttaacgc gtgttggact gctcgcttga tgcgttgttt tatcaactat
     1621 catgaagaac agaatatcct actccgtcct ggacgtgttg gtggtgtgtt gttccaggtc
     1681 gcattgagtc gctgctataa gatgttcgct acctctactc ctgcttctcc tttgtcattg
     1741 ttcctcaagt cgctgtttgt tccctggatc gaatctgccc cgctgttagc gagtctaacg
     1801 ccaaacgagt catctcgcgt gttagcatgg tatattcctt cctcgtactg gagcgacaat
     1861 ggatggtgca cttgtgacac tcatcgtcac gtcacttttt ccttcattcg cggtcttccc
     1921 accgatctgt cggtgttaga tctattcgat tggtctcgat tccgcgcgac tataaacgta
     1981 gacacgtctc tggtggagct gggcgctgac attcgtgcgg ttaaggtgtc agttcattgg
     2041 acatcgcaga agcccactgt agacgtcttt gacaatcgtg cgcttttcac tcccttccag
     2101 cactaccact tgagtctcca ttgtaattgc gcgcctggtc gcccattctt cgcgaaaaac
     2161 atgaaactat atctgtcgac ggttggaggc gagcactga
//