LOCUS KF741717 3830 bp RNA linear VRL 30-NOV-2014 DEFINITION Avian orthoreovirus strain C78 segment L2, complete sequence. ACCESSION KF741717 VERSION KF741717.1 KEYWORDS . SOURCE Avian orthoreovirus ORGANISM Avian orthoreovirus Viruses; dsRNA viruses; Reoviridae; Spinareovirinae; Orthoreovirus. REFERENCE 1 (bases 1 to 3830) AUTHORS Teng,L., Xie,Z., Xie,L., Liu,J., Pang,Y., Deng,X., Xie,Z., Fan,Q. and Luo,S. TITLE Direct Submission JOURNAL Submitted (17-OCT-2013) Department of Biotechnology, Guangxi Veterinary Research Institute, 51 You Ai Road, Nanning, Guangxi 530001, China FEATURES Location/Qualifiers source 1..3830 /mol_type="genomic RNA" /db_xref="taxon:38170" /strain="C78" /segment="L2" /organism="Avian orthoreovirus" CDS 15..3794 /codon_start=1 /protein_id="AIS22881.1" /translation="MHVNGFDDATLSYAQSISGVIPMTNKLFEQASASIRALPRSHVY ALLDDVNFSVTCVIPNRIYHHPDHSEYFYVDAVNRVRRKQVIDPDDVFVPNCNLQGLI TPMERLPNYGQLSEIISSNARDGLPSARIAATFYNISVSQARQVKAPLESFLLPLLLS ETCPLSDDPCGFDTTASPPIHANLALWVLREISRTICGSSKDRSPWLLLDSGVSWFMS PLMSSAIPPLMADLTNLAIYKQICSVSDELHSLAVQVVLQAAASQSYGHYILQTKSIF PQNTLHNMFRTLTDGIVPVIDWLEPRANYRFMLQGARKVTSDDANQAPDNTDAAEQLG RRMGCLDVVRSLRKMSSSITVHSHDAMTFVRDAMSCTSGIFITRQPTETVLKEYTQAP TIEVPIPQSDWSPPIGSLRYLSDACSLPAVYLARAWRRAASAVVDNPRTWDPLYQAIL RSQYVTSRGGSGAALRDALKAAEVELPQYPGVSVKVATKIYQAAQTADVPFDKLSRAV LAPLSMGLRNQVQRRPRTIMPLNVVQQQISAAHTLSADYINYHMNLSTTSGSAVIEKV VPLGMYASCPPAQAVNIDIKACDASITYQYFLSVIVGAIHEGAAGRRVSSSFMGVPPS VLSVVDASGVTSSMPISGFQVMCQWLAKLYQRGLEYQVTDTFSPGNIFTHHTTTFPSG STATSTEHTANNSTMMDGFLRAWIPSSGASDVLKKFCKSISIQRNYVCQGDDGLMVVD GLSTGKLSGEIIDEFVRELRAYGKSFGWNYDIEFTGNAEYLKLYFLNGCRIPNVSRHP ICGKERASGDKLEMWPSTIDIFNGIFVNGVHDGLPWRRWLRYCWALALMCSGKTVRHD DSEVLIQYPMWSFVYWGLPPVSAFGSDPWIFSPYMPTGDHGFYSMLTLVRPLITNLSP SSDTSGLFGQCDHNVLFNSELVYQGYYMAQCPRQPSRSNRRDDPDSVQRFVKALESYL YISPELKSRVRLGRDRWQKLVGYTEKSPPSLDDVAFKWFRSAQEADLPTATEIQSMDL ALLAARRRTYQGFSKLLNTYLRVTWDLSDPVEHAVDPRVPLCAGVSPSNSEPFLKLYS VGPMMQSTRKYFSNTLFIHRTVSGLDVDVVDRALLRLRALNAPDDVVVAQLLMVGLSE AEAATLAAKIRTMDINAVQLARVVNLSIPDSWMTMDFDRLIRDIVSLTPLTVRSLTTD LPSGVPWARAILQFLGAGVAMTAVGPLRRPYLHSVAGGMSSFIKQFRRWMRAETR" /product="lambda-B protein" misc_feature 51..3785 /db_xref="CDD:285203" /note="Reovirus RNA-dependent RNA polymerase lambda 3; Region: RdRP_5; pfam07925" ORIGIN 1 gctttttcct caccatgcat gtcaacgggt ttgatgatgc tactctctct tacgcacaat 61 ccatctcggg ggttattcca atgacaaata agttatttga gcaagcatct gcatcgatac 121 gtgccttacc gcgctcacac gtttacgctc tattagatga tgtgaatttt tctgttacat 181 gtgtgatccc gaatcgcatc taccatcacc ctgatcactc tgagtatttt tatgttgatg 241 cagttaatag ggttagacga aaacaagtta tcgatcctga tgatgtattc gttccaaatt 301 gtaacctgca gggtcttatc actccgatgg agaggttacc aaattatggt cagttgtctg 361 agattatttc atcgaacgct cgggatggct tgccatctgc acgcatagca gctacatttt 421 ataacatttc ggtatctcag gctcgtcaag ttaaagctcc acttgaatca tttttgttac 481 ctttgctgtt atctgaaacc tgcccattat cggatgatcc ttgcggattt gacaccacag 541 cttctccccc aatccatgca aatctggcgt tatgggtgct acgtgaaatc agtcggacta 601 tttgtggatc ctcgaaagac cgttcaccct ggttattgct tgattcaggg gtctcgtggt 661 tcatgtctcc gttaatgtca tcagccattc cgcctctcat ggctgactta acgaatctag 721 caatctataa acaaatttgt tctgtgtcgg acgagcttca ttctcttgcg gttcaagtgg 781 tgttgcaggc tgcagcgtca caatcatatg gccactacat attgcagacg aagtcaatat 841 ttccccagaa tacattgcat aacatgtttc gtacactcac cgatggcatc gttccggtta 901 tagattggct ggaaccgcgt gctaactatc gctttatgct tcaaggtgcg cgcaaagtga 961 cttcagacga tgcgaatcaa gctccggata acacagacgc tgccgagcaa cttggccgta 1021 gaatggggtg ccttgatgtc gtacgctctc tgcgcaagat gtcttcatct atcactgtcc 1081 attcacacga tgctatgacc tttgtacgtg atgctatgtc gtgcactagt ggcatattta 1141 ttacgcgaca acctactgag actgttttaa aagagtacac gcaagcccct accattgaag 1201 ttcctattcc acagtcagat tggtcaccgc ctattggatc tttgcgatat ctctcggatg 1261 cctgctctct ccccgctgta tatttggcta gggcttggcg aagagctgct tctgctgtag 1321 tggataaccc acgtacctgg gaccctttat atcaggccat ccttcgctct cagtatgtga 1381 cgtcacgtgg tgggtctggt gctgcgttaa gagatgcttt gaaggctgca gaagttgaac 1441 ttcctcagta tcctggggtc agtgttaagg tggcgaccaa gatttatcag gcggctcaga 1501 ctgcggacgt accttttgac aagttatctc gggctgttct agctccgttg tcaatgggct 1561 tacgtaacca agttcagcga cgtccaagga ccattatgcc tctgaatgtc gttcaacagc 1621 agatctcagc ggctcacact ctctccgctg actacatcaa ttatcacatg aacttatcga 1681 cgacatcggg tagcgctgtt attgagaagg tggttccatt aggtatgtat gcgtcctgtc 1741 cccctgctca agcggttaac attgatatca aagcttgtga cgcgtctatc acgtaccagt 1801 attttctttc cgttatagtc ggtgctattc atgagggtgc agcaggccgc cgcgtctcgt 1861 cctcattcat gggagttcca ccaagtgtgc tatctgttgt tgatgctagc ggagtaacgt 1921 cctcaatgcc tatctcaggt ttccaggtta tgtgtcagtg gttggctaag ctctaccagc 1981 gaggtcttga gtatcaagta acggacacgt tctcgccagg caatattttc actcatcata 2041 ccactacttt tccctctggc tcaacagcga cgtctacaga acatactgca aataatagta 2101 cgatgatgga tggatttttg cgtgcttgga ttccttcctc cggtgcgtct gatgtgctga 2161 agaagttctg caaatccatt tcaatacaac ggaattacgt ttgtcagggt gacgacggtt 2221 taatggtcgt tgatgggcta tcaacaggta aattatcagg cgagataatc gatgaattcg 2281 tcagagagtt gagagcctat ggtaaatcgt ttgggtggaa ctacgacata gagtttaccg 2341 gaaatgctga gtacctaaaa ttatatttcc taaatggttg ccgtataccg aatgtttctc 2401 ggcatccgat ctgtggcaaa gagcgcgctt caggggataa gttagaaatg tggccatcca 2461 ctattgacat cttcaatggc atatttgtga acggtgtgca cgatggttta ccgtggcgca 2521 gatggttgcg ttattgttgg gctctcgctc tcatgtgttc tgggaaaacc gtacgtcacg 2581 acgattctga ggtgctgatc caatacccta tgtggtcctt tgtgtattgg ggtctgcctc 2641 ccgtgagtgc gtttgggtct gatccatgga tcttttctcc atacatgccc actggtgatc 2701 atggttttta ttcaatgtta actttagtgc gtcctctgat cactaacttg tccccgtctt 2761 cagacacttc aggattattt ggtcaatgtg atcataacgt cttgttcaac tctgagctgg 2821 tttatcaggg ctattacatg gctcaatgcc cacggcaacc ctctcgttcg aatcgtaggg 2881 atgatcctga ctctgtacag cgtttcgtta aggctttaga gtcttatctt tatatttccc 2941 ctgagctaaa gtctcgagtg cgacttggtc gcgaccgatg gcaaaagttg gttgggtata 3001 cagaaaaatc tcctccgtcg cttgatgacg tggctttcaa atggttccgg agtgcacagg 3061 aagctgatct tccaactgct acagagattc aaagcatgga tctggcttta ctggcagcca 3121 gacgtcggac gtatcaaggt ttctccaagt tgttaaacac ctacttgagg gtgacttggg 3181 atttatctga tcctgttgaa cacgctgtag atcctcgtgt tcccttgtgt gctggtgttt 3241 ctccatcgaa tagcgaaccg tttcttaaac tgtactccgt tggtccaatg atgcaatcta 3301 cgcgtaaata tttcagcaat acgctattca tccatcggac tgtgtctggt cttgacgtcg 3361 atgtcgttga tcgtgcgctt ctcaggttgc gtgctcttaa tgcgcctgat gatgtggttg 3421 tggctcaact tttgatggta gggttgtcag aagccgaagc tgctacgttg gcagcgaaaa 3481 tacggacgat ggatattaac gccgtgcaat tggccagagt tgttaatcta tctattcctg 3541 actcgtggat gaccatggac ttcgatcgct tgatacgaga tatcgtgtct ctcactcctc 3601 taaccgtccg gtccctaacc accgatctac cctctggtgt gccgtgggct cgcgcgatac 3661 tgcagttcct aggtgcgggt gttgctatga cggctgttgg acccttgcgt cgtccttact 3721 tgcactcagt tgctggaggt atgtcctcat ttattaagca gttccgccgg tggatgcgtg 3781 ccgaaacgag gtagcgtccg tgctcggcat ggctcgagga attactcatc //