LOCUS       KR997914                1996 bp    RNA     linear   VRL 24-NOV-2015
DEFINITION  Avian orthoreovirus strain D1246 segment M3 mu NS gene, complete
            cds.
ACCESSION   KR997914
VERSION     KR997914.1
KEYWORDS    .
SOURCE      Avian orthoreovirus
  ORGANISM  Avian orthoreovirus
            Viruses; dsRNA viruses; Reoviridae; Spinareovirinae;
            Orthoreovirus.
REFERENCE   1  (bases 1 to 1996)
  AUTHORS   Dandar,E., Feher,E., Balint,A., Kisfali,P., Melegh,B., Mato,T.,
            Kecskemeti,S., Palya,V., Banyai,K. and Farkas,S.L.
  TITLE     Genome Sequences of Three Turkey Orthoreovirus Strains Isolated in
            Hungary
  JOURNAL   Genome Announc 3 (6), e01333-15 (2015)
   PUBMED   26586882
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1996)
  AUTHORS   Feher,E., Dandar,E. and Banyai,K.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-MAY-2015) Institute for Veterinary Medical Research,
            Centre for Agricultural Research, Hungarian Academy of Sciences,
            Hungaria krt 21., Budapest, Pest H-1143, Hungary
COMMENT     GenBank Accession Numbers KR997909-KR997918 represent sequences
            from the 10 segments of Avian orthoreovirus D1246.
            ##Assembly-Data-START## Assembly Method :: CLC Genomics Workbench
            v. 7,0 Sequencing Technology :: IonTorrent; Sanger dideoxy
            sequencing ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1996
                     /mol_type="genomic RNA"
                     /country="Hungary"
                     /isolation_source="feces"
                     /segment="M3"
                     /collection_date="2009"
                     /host="turkey"
                     /db_xref="taxon:38170"
                     /strain="D1246"
                     /organism="Avian orthoreovirus"
     CDS             25..1932
                     /codon_start=1
                     /protein_id="ALG03379.1"
                     /translation="MASTKWGDKPMSLSMSHDGSSIRSAASQFLSVPLSHSTPIPPQR
                     KTVLLKFMIGDDLVTVQGALAPFDEYWYDNQPLLAQAVEMLASEDRLRRFEHYEKFLL
                     KKGHQITEIMNKLRLFFTDVLKVKMEADALPALAQYLMLGDLEAVSTDHPPDACVPVT
                     SKIVTKQQTIAKSPGRLDEEEYNVIRSRFLTHEVFDLTSDLPGVQPFMDMYYATVPRA
                     DSTGWCAYRRKGLLIHAPNEQFSDLTIFSTRFTASRELQLMAGDVVVACFDLMDVSDV
                     APSHHASVQEERTIGTSRYSNVTANDHPLVFFSPSALRWAIDHACTDSLVSTRNIRVC
                     VGIDPLVTRWTRDGVQEAAILMDDKLPSAGRARMALRTLLLARRSPMTSFLLGALKQS
                     GGQLIEHYRCDAANRYGSPTVPTSHPPPCSKCPELKEQIAKLSSSPIPKLNSTAGPAV
                     LLSKIADLQRANRELSLKLVDVQPAREDHLLAYLDEHVCVNAKDHEKDLLARCNVSSD
                     SISSILGQRAKNRERFETRLRQEASAEWEPRVEALSRELAEARVEQQDMMTQSLQYLN
                     ERDELLHEVDELKRELATLRSANVRLNADNHRMSRATRVGNAFVSDVEPLPSGIPGES
                     KPSMEELVDDL"
                     /product="mu NS"
                     /note="non-structural protein"
     misc_feature    <1300..>1809
                     /db_xref="CDD:274009"
                     /note="chromosome segregation protein SMC, primarily
                     archaeal type; Region: SMC_prok_A; TIGR02169"
ORIGIN      
        1 gctttttgag tcctagcgtg gatcatggcg tcaaccaagt ggggagacaa gccgatgtcg
       61 ctctcaatgt ctcacgatgg atcatctatc cgcagtgctg cctcacaatt cttgtcggtt
      121 cccctatctc attcaacgcc catcccacct caacggaaga ctgtgttact gaagtttatg
      181 attggcgatg atctggttac tgttcagggt gccctcgccc cgtttgacga gtattggtat
      241 gataatcagc ccttgctggc tcaggctgtt gagatgcttg cctctgagga tcgtttgcgt
      301 cgctttgagc attacgagaa atttttactc aagaaaggtc atcaaataac tgagatcatg
      361 aacaagctac gcctcttttt cacggatgtt cttaaagtca agatggaagc tgacgcttta
      421 cccgccctag ctcaatatct gatgcttgga gacttagagg ctgtctctac cgatcacccg
      481 cctgatgctt gcgtcccagt cacctcaaaa atcgtgacta agcagcagac cattgctaaa
      541 tctcctggac gtctcgatga ggaggaatac aatgttattc gatcacgctt cctcactcat
      601 gaagttttcg acttaacgtc cgatttaccc ggagtgcaac cgttcatgga catgtattat
      661 gccaccgttc cccgtgccga ttctacagga tggtgcgcat atcgtcgaaa gggcttactt
      721 attcacgctc ctaatgagca attctcagat ttgactatct tctccacacg tttcacggcg
      781 tcacgtgagc tacagcttat ggctggagat gtcgtcgtgg cttgctttga tcttatggac
      841 gtttccgacg ttgcgccatc tcatcatgca tcagtgcaag aggaacgtac tatcggaact
      901 agtcggtatt cgaatgtaac ggctaatgat catcctttgg tgttcttctc acccagtgcg
      961 cttcggtggg caatcgacca tgcttgtacc gactctttgg tttccactcg gaatatccgt
     1021 gtttgtgttg gcatcgaccc gttggtaact cgatggaccc gagacggcgt gcaagaggct
     1081 gctattctca tggatgataa gctgccatca gccggtcgtg cgcgtatggc gttgcgaaca
     1141 ttgcttcttg ctaggcgttc gccaatgaca tccttcttac tcggtgcctt aaagcagtca
     1201 ggcggccagt taatagagca ctatcgatgc gacgcggcta acagatacgg gtcccccacc
     1261 gtcccgactt cccatccgcc accctgttcg aagtgtcctg agctaaaaga acaaattgcc
     1321 aagctctcgt catcgcctat acccaagctt aactcgaccg ccggtccagc cgtactgcta
     1381 tctaaaatcg ctgacctcca gcgtgctaat agagaactgt cgttgaaact agtcgatgtt
     1441 caacccgcta gggaggatca cttgctggct tatcttgatg aacacgtgtg cgtaaacgct
     1501 aaagatcatg aaaaagacct gcttgctcgt tgtaacgtat ctagtgattc aatctcttcc
     1561 atccttggtc agcgtgcaaa gaatcgtgaa aggtttgaga ctcgactgcg acaggaggcc
     1621 agtgctgagt gggaacctcg tgtggaagcg ttaagccgag agttggctga agctcgcgta
     1681 gaacagcagg acatgatgac tcaatctcta cagtatttaa atgagcgtga cgaactgctc
     1741 catgaagtgg atgagcttaa gcgcgaactg gccaccttgc gttccgctaa tgtacgattg
     1801 aatgctgata atcatcggat gagtcgtgca actcgtgtcg gaaacgcttt cgtcagtgac
     1861 gtcgagcctc taccctctgg catacctggt gaatcgaaac catctatgga agaattggtg
     1921 gatgatctgt gagctttgac ctgtgactcg acttctctct gattccatgt acccacggcg
     1981 gactcggtta ttcatc
//