LOCUS       JQ916907                1202 bp    RNA     linear   VRL 21-DEC-2012
DEFINITION  Avian orthoreovirus strain NK segment S3, complete sequence.
ACCESSION   JQ916907
VERSION     JQ916907.1
KEYWORDS    .
SOURCE      Avian orthoreovirus
  ORGANISM  Avian orthoreovirus
            Viruses; dsRNA viruses; Reoviridae; Spinareovirinae;
            Orthoreovirus.
REFERENCE   1  (bases 1 to 1202)
  AUTHORS   Zhang,W. and Chen,F.
  TITLE     Segment S3 sequence of Avian orthoreovirus isolate
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1202)
  AUTHORS   Zhang,W. and Chen,F.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-APR-2012) Avian Disease Control of College of
            Veterinary Medicine, China Agricultural University, 2nd West
            Yuanmingyuan Rd., Beijing 100193, China
FEATURES             Location/Qualifiers
     source          1..1202
                     /mol_type="genomic RNA"
                     /country="China"
                     /segment="S3"
                     /collection_date="01-Mar-2011"
                     /host="legehehne"
                     /db_xref="taxon:38170"
                     /strain="NK"
                     /proviral
                     /organism="Avian orthoreovirus"
     CDS             31..1134
                     /codon_start=1
                     /protein_id="AFY06640.1"
                     /translation="MEVRVPNFHSFVEGITSSYLKTPACWNAQTAWDTVTFHVPGVIR
                     VGNAYCCSQCCGVLYYGTLPSDGNYFPHHKCHQQQFRTDTPLLRYVRIGRTTEHLMDQ
                     YAVALESIAEHYDEISQRMVDEPENDEVTPLDIVTRTESIRSDKAVDPDFWTYPLERR
                     SDDSRRDIASACWKMIDASARSLTLPNCLVSPSLHSRSVFGQMQTTTTIYDVAASGKA
                     VKFSPMVATLAQRDAGPIMLANADPAEGVYSFWTSHFAVSPLIGGVGITGQYARESYH
                     QVGHPVIGSGKKASHYGNLFMEAWRGWSKSAFACATGMEPAECESRLRGHARTMLGRS
                     LPPVCDDDVAQQSGAVLTSLQKTNKFTVVECGW"
                     /product="sigmaB"
                     /note="outer shell"
ORIGIN      
        1 gctttttgag tccttagcgt gcaagccgca atggaggtac gtgtgccaaa ctttcactcg
       61 ttcgttgaag gaataacatc tagctacttg aagactcctg cttgctggaa tgcacagaca
      121 gcctgggata ctgtgacctt tcacgtccct ggtgtaatta gagttggtaa cgcttactgt
      181 tgctctcaat gttgtggtgt actttactac gggactttgc cctcggatgg taattacttc
      241 cctcatcaca agtgccatca gcaacagttt agaactgata ctccactgct tcgatatgtg
      301 cgcattggta gaaccactga gcatctgatg gaccaatacg ctgttgcgct ggagtccatt
      361 gctgaacact atgacgagat tagtcaacgc atggtcgatg agccagagaa tgacgaggtt
      421 acgcctcttg acatcgttac gcgtaccgaa tctatcagga gtgacaaggc ggttgaccca
      481 gacttctgga catacccact cgagcggcgt tctgatgatt ctcgtagaga catcgcttca
      541 gcgtgctgga aaatgattga tgcgtcggcg cgtagtctca ctcttccaaa ttgcctcgtc
      601 tccccctctt tgcactctcg ctccgtcttt ggtcagatgc agacgaccac cactatatac
      661 gatgttgcgg catcgggaaa ggccgttaag ttttctccaa tggttgctac actagcgcaa
      721 cgtgatgctg gccctataat gcttgcgaac gctgacccgg cggaaggcgt gtactcgttc
      781 tggacgtcgc atttcgctgt ctcaccgctc atcggcggag ttggaattac gggacagtac
      841 gctcgtgagt cgtaccatca agtgggccat ccagtgattg ggagtggtaa gaaggcatcg
      901 cattacggga atctgttcat ggaagcatgg cgcgggtggt cgaagtcagc tttcgcatgt
      961 gctactggaa tggagccagc tgaatgtgaa tctcgtctga ggggacatgc tcgtaccatg
     1021 ctcggccgct ctctgccgcc cgtttgtgac gacgatgttg ctcagcagtc tggcgctgta
     1081 ctgacttcgc tgcagaagac gaacaagttc actgttgtgg agtgtggttg gtaagtacct
     1141 ccgggtcaaa atgcacatag gctcccacct atgtgacggt tagcgggact cgcctattca
     1201 tc
//