LOCUS       KM877333                1202 bp    RNA     linear   VRL 19-JUN-2015
DEFINITION  Avian orthoreovirus strain Reo/PA/Broiler/05682/12 segment S3,
            complete sequence.
ACCESSION   KM877333
VERSION     KM877333.1
KEYWORDS    .
SOURCE      Avian orthoreovirus
  ORGANISM  Avian orthoreovirus
            Viruses; dsRNA viruses; Reoviridae; Spinareovirinae;
            Orthoreovirus.
REFERENCE   1  (bases 1 to 1202)
  AUTHORS   Tang,Y. and Lu,H.
  TITLE     Genomic characterization of a broiler reovirus field strain
            detected in Pennsylvania
  JOURNAL   Infect. Genet. Evol. 31, 177-182 (2015)
   PUBMED   25660035
REFERENCE   2  (bases 1 to 1202)
  AUTHORS   Lu,H., Tang,Y., Dunn,P.A. and Wallner-Penndelton,E.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-OCT-2014) Veterinary and Biomedical Sciences, The
            Pennsylvania State University, 101 Wiley Lab, Avian Virology,
            University Park, PA 16802, USA
COMMENT     ##Assembly-Data-START## Sequencing Technology :: Sanger dideoxy
            sequencing ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1202
                     /mol_type="genomic RNA"
                     /country="USA"
                     /segment="S3"
                     /collection_date="14-Mar-2012"
                     /host="broiler chicken"
                     /db_xref="taxon:38170"
                     /strain="Reo/PA/Broiler/05682/12"
                     /organism="Avian orthoreovirus"
     CDS             31..1134
                     /codon_start=1
                     /protein_id="AJF23514.1"
                     /translation="MEVRVPNFHSFVEGITSSYLQTPACWNAQTAWDTVTFHVPDVIR
                     VGNAYCCSQCCGVLYYGTLPADGNYFXHHKCHQQQFRTDTPLLRYVRIGRTTEHLLDQ
                     YAVALESIAEHYDEISQRMVDEPENDEVTPLDIVTRTESIRSDKAVDPDFWTYPLERR
                     PDDSRRDIASACWRMIDASSRSLTLPNCLVSPSVHSRSVFGQMQTTTTIYDVAASGKA
                     VKFSPMVATLAQRDAGPVMLANADPADGVYPFWTSHFAFSPLIGGVGITGQYARESYH
                     QVGHPVIGSGKKASHYRNLFMEAWRGWSKSAFACAAGMEPAECESRLRGHARTMLGRS
                     LPSVCDDDVAQQSGAVLASLQKTTKFTVVECSW"
                     /product="Sigma-B"
                     /note="outer capsid protein"
ORIGIN      
        1 gctttttgag tccttagcgt gcaagccgca atggaggtac gtgtgccaaa ctttcactcg
       61 ttcgttgaag gaataacatc tagctactta cagactcctg cttgttggaa tgcacaaacg
      121 gcatgggaca ctgtaacctt tcacgttcct gacgtcatta gagtcggtaa tgcgtactgt
      181 tgctctcagt gctgtggcgt actttactac ggaaccctgc cagccgacgg gaattacttc
      241 cntcatcaca agtgtcacca gcaacagttc aggactgata ctccgctgct acgatacgtg
      301 agaatcggta gaacgaccga gcatttgcta gatcaatatg ctgtcgctct agaatctatc
      361 gctgagcact acgatgagat tagccaacgt atggttgatg agcctgagaa tgatgaagtt
      421 acgccccttg acatcgtaac gcgtaccgag tctatccgaa gtgataaggc agtagatcca
      481 gacttctgga cttacccact tgagagacgc cctgatgatt ctcgtcgaga catcgcctca
      541 gcgtgttgga ggatgattga cgcgtcatca cgtagtttga ctcttccaaa ttgccttgtt
      601 tccccatccg tgcattcgcg ctccgtcttt ggccaaatgc aaacgaccac caccatatat
      661 gacgtcgctg cgtctggaaa ggcagttaag ttctccccga tggtcgccac ccttgctcaa
      721 cgcgatgccg ggcctgtgat gctcgcgaac gctgatccag ccgatggcgt ttatccattt
      781 tggacatcac attttgcttt ttcgccactt atcggtgggg ttgggattac aggacagtac
      841 gctcgtgagt cataccacca agtgggtcat ccggtaattg ggagtggtaa aaaggcgtcg
      901 cactacagaa atctgttcat ggaagcgtgg cgtgggtggt cgaaatcagc ttttgcatgt
      961 gccgcgggaa tggagccagc tgaatgtgag tctcgtttga ggggtcacgc tcgcactatg
     1021 ctcggacggt ctctgccaag tgtttgtgat gatgacgtcg ctcaacagtc tggcgccgtg
     1081 ttagcgtctc tgcagaagac cactaaattc accgttgtgg agtgtagttg gtaagtacct
     1141 ccgggccaaa atgcacatag gctcccacct atgtgacggt tagcgggact cgcctattca
     1201 tc
//