LOCUS       AY608700                1996 bp    RNA     linear   VRL 07-AUG-2004
DEFINITION  Avian orthoreovirus strain S1133 nonstructural protein gene,
            complete cds.
ACCESSION   AY608700
VERSION     AY608700.1
KEYWORDS    .
SOURCE      Avian orthoreovirus
  ORGANISM  Avian orthoreovirus
            Viruses; dsRNA viruses; Reoviridae; Spinareovirinae;
            Orthoreovirus.
REFERENCE   1  (bases 1 to 1996)
  AUTHORS   Touris-Otero,F., Cortez-San Martin,M., Martinez-Costas,J. and
            Benavente,J.
  TITLE     Avian reovirus morphogenesis occurs within viral factories and
            begins with the selective recruitment of sigmaNS and lambdaA to
            microNS inclusions
  JOURNAL   J. Mol. Biol. 341 (2), 361-374 (2004)
   PUBMED   15276829
REFERENCE   2  (bases 1 to 1996)
  AUTHORS   Cortez-San Martin,M., Touris-Otero,F., Martinez-Costas,J. and
            Benavente,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-APR-2004) Bioquimica, Universidad de Santiago de
            Compostela, Av. las Ciencias S/N, Campus Sur., Santiago de
            Compostela, La Coruna 15782, Spain
FEATURES             Location/Qualifiers
     source          1..1996
                     /mol_type="genomic RNA"
                     /db_xref="taxon:38170"
                     /country="USA"
                     /strain="S1133"
                     /segment="M3"
                     /organism="Avian orthoreovirus"
     CDS             25..1932
                     /codon_start=1
                     /protein_id="AAT85608.1"
                     /translation="MASTKWGDKPMSLSMSHDGSSIRSAASQFLSVPLSHSTPIPPQR
                     KTVLLKFMIGDELITVQGALAPFDEYWYDNQPLLAQAVEMLASADRLRQFEHYEKFLL
                     KKGHQITEIMNRLRLFFTDVLKVKMEADALPALAQYLMVGTLEAVSTADSPDACAPVT
                     SKILAKQQTIAKSPGRLDEEEYNVIRSRFLTHEVFDLTSDLPGVQPFMDMYYATVPRA
                     DSTGWCVYRRKGLLIYAPDEQFSDLTIFSTRLTASRELQLVAGDVVVACFDLMDVSDI
                     APSHHASVQEERTLGTSKYSNVTANDHPLVFFSPSALRWAIDHACTDSLVSTRNIRVC
                     VGIDPLVTRWTRDGVQEAAILMDDKLPSAGRARMALRTLLLARRSPMPSFLLGALKQS
                     GGQLLEHYRCDAANRYGSPTVPISHPPPCSKCPELKEQIAKLSSSPIPKVDSSVGPAA
                     LLSKIADLQRANRELSLKLVDVQPAREDHLLAYLNEHVCVNAKDHEKGLLARCNVSGD
                     SISSILGQRMKNRERFETRLRHEASAEWEPRVEALNQELAKARVEQQDMMTQSLQYLN
                     ERDELLQEVDELKRELTTLRSANVRLNADNHRMSRATRVGDAFVSDVEPLPSGIPGES
                     KPSMEELVDDL"
                     /product="nonstructural protein"
                     /note="mu NS protein"
ORIGIN      
        1 gctttttgag tcctagcgtg gatcatggca tcaaccaagt ggggagacaa gccgatgtcg
       61 ctctcaatgt ctcacgatgg atcatctatc cgcagtgctg cctcacaatt cttatcggtt
      121 cctctgtctc actcaacgcc tatcccacct caacggaaga ctgtgctgtt gaagtttatg
      181 attggtgacg aactgattac cgtccagggt gctctcgctc cgtttgacga atattggtat
      241 gacaaccagc ccctgttggc tcaggctgtt gagatgctcg cctctgcaga tcgtttgcgt
      301 caatttgagc attatgagaa attcctactc aagaaaggtc accagataac tgagatcatg
      361 aacaggttac gtctcttttt tacggatgtt ctcaaagtta agatggaagc tgacgcttta
      421 cccgctttag cccaatatct gatggttgga accttggagg ctgtttccac cgccgattcc
      481 cccgatgcct gcgccccagt cacctcaaag atcttagcta agcagcagac tattgctaag
      541 tctcctggac gtctcgacga ggaagaatat aatgttattc gatcacgttt cctcacacat
      601 gaagtcttcg acttaacgtc cgatttaccc ggagtacaac cgtttatgga catgtactac
      661 gccactgtcc cccgtgctga ttctacagga tggtgtgtgt atcgtcgaaa gggtttgctt
      721 atctacgctc ctgatgagca attctcggat ctgactatct tctccacacg tcttactgca
      781 tcacgtgagc tgcagcttgt ggctggagat gttgtcgtag cctgctttga tctcatggac
      841 gtctctgaca ttgctccatc tcatcatgca tcagtgcagg aagagcgtac tctcgggacc
      901 agtaagtatt cgaatgtgac ggctaatgat catcctctgg tattcttctc acccagtgcg
      961 ctccgttggg caatcgacca tgcttgtact gactccttgg tttctacccg gaatattcgt
     1021 gtctgcgttg gcatcgatcc tctggtaact cgatggaccc gagatggtgt gcaagaggct
     1081 gctattctca tggatgacaa gctaccctca gcaggtcgtg cgcgtatggc gttgcgaaca
     1141 ttgcttctcg ctagacggtc tccaatgcca tccttcttac tcggtgcgct aaaacagtca
     1201 ggcggtcagt tactggagca ctaccgatgc gatgcagcta atagatatgg atctcccacc
     1261 gttccgatct cccatccgcc accatgctca aagtgtcctg agctaaaaga acaaattgcc
     1321 aagctctcgt catcgcctat acccaaagtc gattcgtccg ttggtccagc cgcgctgctg
     1381 tctaaaattg ctgaccttca gcgtgctaat agagaactgt cactgaaact ggttgatgtt
     1441 caacctgctc gggaagatca cttgttggct tatctcaatg aacacgtgtg tgtaaatgct
     1501 aaagatcatg aaaagggcct gctcgctcgt tgtaacgtat ctggtgattc aatctcctct
     1561 atccttggcc agcgcatgaa gaatcgggaa aggtttgaaa ctcgactgcg tcatgaggct
     1621 agtgctgagt gggaaccccg tgtggaagcg ttaaaccaag aattggctaa agctcgtgtc
     1681 gaacagcagg acatgatgac tcaatcccta cagtacctga acgagcgtga tgaactactc
     1741 caggaagtgg atgagcttaa gcgtgagctg actaccctgc gttccgctaa cgtacgattg
     1801 aatgctgaca accatcggat gagtcgtgcg acacgtgtcg gggacgcctt cgtcagtgac
     1861 gtcgagccgc taccctctgg catacctggt gagtcgaaac catctatgga agagttggtg
     1921 gatgatctgt gagctttgac ctgtgactcg acttctctct gattccatgt acccacggcg
     1981 gactcggtta ttcatc
//