LOCUS       EF122838                1113 bp    RNA     linear   VRL 18-DEC-2006
DEFINITION  Avian orthoreovirus strain S1133 non-structural protein (sigma NS)
            gene, complete sequence.
ACCESSION   EF122838
VERSION     EF122838.1
KEYWORDS    .
SOURCE      Avian orthoreovirus
  ORGANISM  Avian orthoreovirus
            Viruses; dsRNA viruses; Reoviridae; Spinareovirinae;
            Orthoreovirus.
REFERENCE   1  (bases 1 to 1113)
  AUTHORS   Guo,K., Dormitorio,T. and Giambrone,J.J.
  TITLE     Rapid Detecting and Subtyping North American Avian Reovirus
            Strains Using Real-time RT-PCR
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1113)
  AUTHORS   Guo,K., Dormitorio,T. and Giambrone,J.J.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-NOV-2006) Poultry Science Dept., Auburn University,
            201 Poultry Science Bldg., Auburn University, Auburn, AL 36849,
            USA
FEATURES             Location/Qualifiers
     source          1..1113
                     /mol_type="genomic RNA"
                     /db_xref="taxon:38170"
                     /country="USA"
                     /strain="S1133"
                     /segment="S4"
                     /organism="Avian orthoreovirus"
     gene            1..1113
                     /gene="sigma NS"
                     /note="non-structural protein"
ORIGIN      
        1 atggacaaca ccgtgcgtgt tggagtttcc cgcaacacat ccggcgcagc tggtcagaca
       61 ctctttagaa acttctattt actacgatgt aatatttcag ctgatggccg taatgcaacg
      121 aaggcggtac aatcccactt tccattcctt tcacgtgctg tgcgatgcct atcgcctctt
      181 gccgctcact gtgctgatag aacccttcgc cgtgacaacg tgaaacagat tcttactcgt
      241 gaactgccat tttcctcgga tctaatcaac tacgcacacc atgtcaattc atcatccctt
      301 actacctctc agggcgtcga agcggctcgt ttggtagctc aagtttatgg ggaacaagta
      361 ccgttcgatc acatttatcc tactggttca gcgacatact gtcctggtgc aatcgcaaat
      421 gctatttctc gccttatggc tggctttgta cctcgtgaag gtgatgactt tgctccgagt
      481 ggccctattg actacctcgc tgctgacctg atcgcgtata agtttgtgct cccttacatg
      541 cttgacatgg tagatggtcg tcctcagatt gtcctgcctt ctcataccgt agaagaaatg
      601 ttgaccaaca ccagcttgct gaactcgatt gatgcttcat ttggtatcga agcgcgcagt
      661 gatcaaagga tgactcgtga tgctgctgag atgagttctc gctccctcaa tgaacttgag
      721 gatcatgatc agagaggtcg tatgccttgg aagatcatgc tagcgatgat ggcggcccaa
      781 ttgaaggttg agttggacgc gctggcggac gagcgtacgg agtcacaagc taatgctcac
      841 gttacatcct tcggatcccg tttatttaat cagatgtcgg cgttcgttac tattgatcgt
      901 gaactgatgg aactggccct tctcatcaag gaacagggct tcgccatgaa tccgggtcag
      961 attgcatcta agtggtcgct gatacgtcgt tccggcccta ctcgtccact ttcaggtgcg
     1021 aagtcttgaa atcagtgtat tacttccgct aattggatga tccgtgaggg tgaccaaacg
     1081 ctactgtctg tctctccagc taggatggcg tag
//