LOCUS       KF741763                1324 bp    RNA     linear   VRL 30-NOV-2014
DEFINITION  Avian orthoreovirus strain S1133 segment S2, complete sequence.
ACCESSION   KF741763
VERSION     KF741763.1
KEYWORDS    .
SOURCE      Avian orthoreovirus
  ORGANISM  Avian orthoreovirus
            Viruses; dsRNA viruses; Reoviridae; Spinareovirinae;
            Orthoreovirus.
REFERENCE   1  (bases 1 to 1324)
  AUTHORS   Teng,L., Xie,Z., Xie,L., Liu,J., Pang,Y., Deng,X., Xie,Z., Fan,Q.
            and Luo,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-OCT-2013) Department of Biotechnology, Guangxi
            Veterinary Research Institute, 51 You Ai Road, Nanning, Guangxi
            530001, China
FEATURES             Location/Qualifiers
     source          1..1324
                     /mol_type="genomic RNA"
                     /db_xref="taxon:38170"
                     /strain="S1133"
                     /segment="S2"
                     /organism="Avian orthoreovirus"
     CDS             16..1266
                     /codon_start=1
                     /protein_id="AIS22925.1"
                     /translation="MARAIYDFFSTPFGNRGLATNRTQLSSLLSSSNSPWQRFLSSMT
                     PLTAPGIVSTPEAPYPGSLMYQESMLHSATVPGVLGSRDAWRTFNVFGLSWTDEGLSG
                     LVAAQDPPPAAPYQPASAQWSDLLNYPRWANRRRELQSKYPLLLRSTLLSAMRAGPVL
                     YVETWPNMISGRLADWFMSQYGNNFVDMCARLTQSCSNMPVEPDGNYDQQMRALISLW
                     LLSYIGVVNQTNTISGFYFSSKTRGQALDSWTLFYTTNTNRVQITQRHFAYVCARSPD
                     WNVDKSWIAAANLTAIVMACRQPPVFANQGVINQAQNRPGFSMNGGTPVHELNLLTTA
                     QECIRQWVMAGLVSAAKGQALTQEANDFSNLIQADLGQIKAQDDALYNQQPGYARRIK
                     PFVNGDWTPGMTAQALAVLATFTA"
                     /product="sigma-A protein"
     misc_feature    118..1251
                     /db_xref="CDD:281127"
                     /note="Reoviral Sigma1/Sigma2 family; Region: Sigma_1_2;
                     pfam03084"
ORIGIN      
        1 gctttttctc ccacgatggc gcgtgccata tacgacttct tttcaacgcc tttcgggaat
       61 cgtggtctag cgacgaatcg tactcaactg tcatcactac tatcgagctc gaattcccca
      121 tggcaacggt ttctatcatc aatgactcca ttgacagcgc caggtatcgt ttcaacgcct
      181 gaagcaccct atccaggttc gttgatgtat caagagtcta tgctccacag tgctactgtc
      241 cctggagtac tcggtagtcg tgatgcttgg cgtacattta atgtcttcgg gctttcgtgg
      301 actgatgaag gattgtcagg actagtagct gcccaagatc ctccccctgc cgccccgtat
      361 cagccagcct ctgctcagtg gtcggatctc ctcaactacc ctagatgggc aaacagacgt
      421 cgtgagctgc aatctaaata cccacttctg cttcggtcca cgctgctttc tgccatgcga
      481 gctggtcctg ttctctacgt tgagacgtgg ccgaatatga tctcaggacg attagctgac
      541 tggttcatgt cccaatatgg caacaatttc gttgacatgt gcgccaggtt gacccagtct
      601 tgttcgaaca tgcctgttga gcctgatgga aattatgatc agcagatgcg tgctttaatt
      661 agtttgtggc ttctttcata cattggggtg gtcaatcaga ccaacaccat cagcggcttc
      721 tacttctcct cgaagactcg gggtcaagcg ttggacagtt ggactttatt ctacactaca
      781 aacactaatc gtgttcaaat tacgcagagg catttcgctt acgtgtgtgc tcggtctccc
      841 gactggaacg tggataaatc atggatcgct gcagcgaact taaccgctat cgtcatggct
      901 tgccgtcaac cgccggtgtt cgccaatcaa ggcgttatta accaagcgca gaaccgacct
      961 ggcttttcca tgaatggggg gacgcccgtc catgagctca acttactgac taccgcgcag
     1021 gaatgtattc ggcagtgggt gatggccggt ttggtgtcag cagcgaaggg gcaagcctta
     1081 acgcaggagg ctaatgactt ctcaaacctc atccaggcgg atctaggaca aatcaaagcg
     1141 caggatgatg ctctgtacaa ccagcagcca gggtacgcga ggagaataaa acccttcgtt
     1201 aacggtgact ggacaccagg tatgaccgcg caagctctgg ccgttctagc cacttttacc
     1261 gcctaggcgt agggtcgtac gctgcccgag tccagccctc cggcagcacg tggatgtatt
     1321 catc
//