LOCUS EU616737 3907 bp RNA linear VRL 28-APR-2008 DEFINITION Avian orthoreovirus isolate C-98 segment L3, complete sequence. ACCESSION EU616737 VERSION EU616737.1 KEYWORDS . SOURCE Avian orthoreovirus ORGANISM Avian orthoreovirus Viruses; dsRNA viruses; Reoviridae; Spinareovirinae; Orthoreovirus. REFERENCE 1 (bases 1 to 3907) AUTHORS Guan,P.Y., Hao,R.F., Wurihan, Temuerbagan, Ma,L.F., Yu,F.L. and Li,R.G. TITLE Direct Submission JOURNAL Submitted (03-APR-2008) College of Animal Science and Animal Medicine, Inner Mongolia Agricultural University, No. 306 Zhaowuda Road, Saihan District, Huhhot, Inner Mongolia 010018, P.R. China FEATURES Location/Qualifiers source 1..3907 /mol_type="genomic RNA" /db_xref="taxon:38170" /country="China" /isolate="C-98" /segment="L3" /organism="Avian orthoreovirus" CDS 13..3870 /codon_start=1 /protein_id="ACC77958.1" /translation="MAQIRGLRLSTTLSAPPPRKIVTSHTYDEPISALKLTTKPWRSL KSRGNDSITAVRLLFPLNGYIEPMLMLEKDMTYDAFESWITPLLSALADQLLRHYPIA AYHGRLINPLLTNAVVAAFLSNVPYAHALDHLFLVRGNVEDIMDAGITIQNHLWFDRG AIVTPAGQKFVQLTGYNFSSNDPCLFSKQLRCYGLVYYFLSMSDCLTYCWRHLSNSTP LIHFDRPSNGIHCLVPSESTTPIAGSLPVSALSSILLESCLQQSSLNALTPTGSPVVR QVEVLLPLSSPFFERQNTLEYSLFALSNALINGYQFVDLRPGHPDCATVAAVLARLTD FSKGITVIQPRPALFTVNHDSPLTYSGENANFIQRLASMSGRSIGPVVIGKSVDHAVG WMPQFDPATSYNPDLSLDSLSRATTLPLRAKYSTFWSGPALFSFASCDRHNGVYDIQF MAQFPPTYFSDDDAFSRSRFSSYRAVKDRSLLKDTANLMYISNLSSSHDHRLVPDSKT MIYVGSSGTHADNQPSIIKPLLAGSLPGVFRPLSVKQIGWEVTNGTICDIELPLATGT FFFVYSDVDQVQSGDSDLDASSRRFCSQLDMLMKLTFTGGSLVVKCNFPTNLVWRHIF STISPYFSSIHLMKPLVSNNLELYLLFAERLPVPDAAFRPSADVVVFWRSQLQRYRVL RDSFSNVPSIGSTLTLDDSLTVSVLNFVDVTSLSSIEDQRALSAFSVLTSLGSQKLSL HPYFDSYRTQLTGIITPHSRNILNRLAYVPRVFPSTIDVQHRVMAASDPEIFGFRSNS WTQLSFFYDATLTATDFTDVKHWLDLGTGPEARPLSFLPTDLPVTLCDTRPFVFPSGC WATFTDFLSYDYLVTNVVLSTGADVVSCILSLGAACADANMTLHEGVRQLISQCVDAS VKTLFLQLNCPLPSAGDVSREILELVQTNSTYVFHTLGRIEPFIPYSALLEIVEDLCP GIVVEIKTMDSSLSWLDYAVQSNASVTSDDIVLAMRLSHFCPLFVFHFDRHSAQFPDD ARVGAPFTVTLLDYEDTRSYEVTLDNVTIATITAGALVGFSSGVSVTSSNNQLVMTID PASPGILSVIQVLPARISLGSCVIEAPDPSLSLIFPATLDTSLSGTDLELRLSDWYDV ALFYVDEAHSRLLPVSDTKYEIYHKDQAPNSRVINYIFDRSDVFFKLVLCDVSPSGIG RFIYRELPELSSPVWPDDARTFLSIPFESPMVIVSPDGPVNYDGANFTPPTSWLTVDG STCVIDGRPSFYVPPGRYGLVRV" /product="guanylyltransferase" /note="mRNA capping enzyme" ORIGIN 1 gcttttccac ccatggctca gattcgaggc cttcggttgt ctacgacact ctcagctcca 61 ccaccaagaa agattgtaac ctcgcatacg tatgatgaac caatctccgc tttaaagctg 121 acaaccaaac cttggcgctc tttaaaatca cgcggcaatg actcaatcac agcagtccgg 181 cttctatttc cccttaatgg ttacattgag cccatgctta tgttagagaa ggacatgaca 241 tacgatgctt ttgagtcttg gattacgccc cttctttctg ctctagctga ccagttgctt 301 agacactacc ctattgctgc ttatcacggg cggttgatta acccgttgtt aaccaatgct 361 gttgttgccg ctttcttatc gaatgtgccc tatgcgcatg cattggatca tctttttctg 421 gttcgtggga acgttgagga tattatggat gcaggaatca caattcagaa tcatttatgg 481 tttgaccgtg gtgctatagt aactccggcc gggcagaagt ttgttcagtt gactggctat 541 aatttttcat ccaatgatcc gtgcttattt tctaagcaat tgcgttgtta tggtcttgtt 601 tactattttc ttagcatgtc cgattgtctg acgtactgtt ggcgtcatct ctctaactcg 661 actcctctga tacattttga tcgtccgtcc aacgggattc attgcttggt gccctccgaa 721 tccacgacac ctatcgccgg ttcattacct gtgtcagctc tcagctccat tctgctggag 781 tcttgtcttc agcaatcctc acttaatgct cttactccta ctggctcacc agtcgttagg 841 caggtggagg tgttgctacc tctatcgtca ccatttttcg aacgtcaaaa tactctggaa 901 tattctcttt ttgctctttc gaatgctctg attaatggtt atcaattcgt tgatttacgt 961 cccggacatc cagattgcgc taccgttgct gctgttttag ctaggttaac tgatttctcg 1021 aaaggtatca ctgttattca accacgccct gctcttttca ctgttaatca tgatagtcct 1081 ctgacgtaca gtggagagaa tgctaatttc atccaacgct tagcttctat gtctggaaga 1141 tctattggtc ccgtcgttat tgggaaatct gtcgatcatg ccgtcggttg gatgcctcag 1201 tttgatcccg ctacatcgta caatcctgat ttatcattag attcactctc acgagctacg 1261 acactgccac tccgtgctaa gtattctact ttctggtctg gccccgcgct cttttccttt 1321 gcttcgtgtg acaggcacaa tggcgtgtat gacattcagt tcatggccca atttcctcct 1381 acgtatttca gcgatgatga tgccttttct aggtcaaggt tttcttccta tcgtgctgtt 1441 aaagatcgat cgttgttaaa agatactgcc aatctgatgt acatttcaaa cttatcgagc 1501 tcgcatgacc atcgtcttgt ccctgattct aagaccatga tttacgtagg gtcttccggt 1561 acgcatgcag ataaccaacc ttccattatt aaacctcttt tagctgggtc tcttccaggt 1621 gttttccgcc ccctatccgt gaagcagatt ggttgggagg ttactaacgg gactatttgt 1681 gacattgagc tgcctttagc taccggcaca ttcttcttcg tgtacagtga cgtagaccag 1741 gttcagtcag gcgattccga cctagacgct tcctcccgac gcttttgctc tcaattggat 1801 atgttaatga aattgacgtt tactggcggt tccttagttg tcaagtgcaa ttttccgact 1861 aacttggttt ggcgtcatat cttttctacc atttctccct atttctcgtc cattcatctg 1921 atgaagcctc ttgtgtcgaa taatttggag ttgtacttat tatttgcaga gcgtttgcct 1981 gtccctgatg ccgcattccg tccgtcggcg gatgttgtcg ttttctggcg atctcaactg 2041 caacgctacc gggtattgcg cgactcattc tctaatgtac cctctatcgg ctctactctt 2101 accttagatg actcattgac tgtatctgtt ctgaattttg tcgatgtcac ttccctttcc 2161 tccattgagg atcaacgagc tttatccgct ttctcagtcc ttacctcctt ggggtctcag 2221 aagttatcgc ttcatcccta ctttgatagt tatcgcacac agctcactgg aataatcact 2281 ccccattctc gtaacatctt aaatagatta gcgtacgtcc cgcgtgtctt cccttcaacg 2341 atcgacgttc aacatcgtgt catggctgcc tcagatcccg agatttttgg ttttcgctcc 2401 aattcgtgga ctcaattgtc ctttttctac gatgctacgt tgactgcgac ggattttact 2461 gatgtgaagc attggttgga tctgggaact ggacccgaag cgcgaccgtt gtcttttctg 2521 ccgactgatc ttcctgtcac attgtgcgac actcggcctt tcgtttttcc gtctggctgt 2581 tgggccacgt tcactgactt cttaagttat gattacctcg ttacgaacgt cgttttatca 2641 actggtgccg atgttgtgtc ctgcattctc tccctagggg cagcctgcgc tgacgctaac 2701 atgactctac atgagggcgt gcgtcaacta atttcccagt gcgtagatgc tagtgttaaa 2761 acgctgtttt tgcagcttaa ttgtcccctt ccatcagcgg gtgatgtgtc tcgggagatc 2821 ctcgagttgg ttcagactaa ttcaacatac gtattccata ccttaggtcg cattgagccg 2881 ttcatcccat attccgctct cttggaaata gtcgaggatt tgtgccctgg catcgtcgtt 2941 gagattaaaa cgatggattc ttctctttca tggcttgact acgctgttca atctaatgca 3001 tcagtgacgt cggacgacat tgtcttagcg atgcgtttgt ctcacttctg tcctcttttt 3061 gtgtttcatt ttgaccgtca ttctgctcaa ttcccggatg atgcgcgtgt tggtgctccc 3121 ttcaccgtca cattgttgga ttatgaagat actcgatcat atgaggtgac tttagacaat 3181 gtcactattg ctactattac tgcaggcgct ctggtcggat tttcatctgg tgtaagtgtc 3241 acctcatcca acaatcagct ggttatgact attgatcctg cgagtccagg aattctttct 3301 gtcattcagg tactccccgc tcgcatctca ttaggcagct gcgtgataga ggcgccggac 3361 ccatcccttt ctctgatttt tcctgctaca ttagatactt ccttgtcagg gaccgacctg 3421 gagttacgtc tgtctgactg gtatgacgtc gctctcttct acgtcgacga agcgcactct 3481 cgactgctgc ccgtatccga taccaagtac gagatttatc ataaggatca agcgccgaat 3541 agtcgagtaa tcaactatat ctttgatcgt tctgacgtgt tctttaaatt ggtgctgtgc 3601 gacgtctctc catctggaat aggtcgcttc atctatcgtg agttaccgga gctaagttcc 3661 cctgtatggc ctgatgatgc gcgtactttc ttatccatac catttgaatc ccctatggtg 3721 attgtatcgc cggacggacc cgttaactat gacggtgcca atttcactcc tccaacttca 3781 tggcttacag ttgacggcag cacctgcgtc atagatggcc gtccctcatt ttacgtgccc 3841 cctggccgat atggtctggt gagagtctaa acgaccgcgg gcctccagta aaagggtgtt 3901 attcatc //