LOCUS       KJ476706                1324 bp    RNA     linear   VRL 10-DEC-2015
DEFINITION  Avian orthoreovirus isolate GX/2010/1 segment S2, complete
            sequence.
ACCESSION   KJ476706
VERSION     KJ476706.1
KEYWORDS    .
SOURCE      Avian orthoreovirus
  ORGANISM  Avian orthoreovirus
            Viruses; dsRNA viruses; Reoviridae; Spinareovirinae;
            Orthoreovirus.
REFERENCE   1  (bases 1 to 1324)
  AUTHORS   Li,C., Wei,H., Yu,L., Duan,S., Cheng,J., Yan,W., Zhang,X. and
            Wu,Y.
  TITLE     Nuclear localization of the p17 protein of avian reovirus is
            correlated with autophagy induction and an increase in viral
            replication
  JOURNAL   Arch. Virol. 160 (12), 3001-3010 (2015)
   PUBMED   26350773
REFERENCE   2  (bases 1 to 1324)
  AUTHORS   Shu,C., Duan,S., Li,C., Zhang,X. and Wu,Y.
  TITLE     Complete Genomic Sequence of Avian Orthoreovirus from China
  JOURNAL   Unpublished
REFERENCE   3  (bases 1 to 1324)
  AUTHORS   Shu,C., Duan,S., Li,C., Zhang,X. and Wu,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-FEB-2014) College of Veterinary Medicine, Yangzhou
            University, 12 East Wenhui Ave, Yangzhou, Jiangsu 225009, China
COMMENT     GenBank Accession Numbers KJ476699-KJ476708 represent sequences
            from the 10 segments of Avian orthoreovirus.
FEATURES             Location/Qualifiers
     source          1..1324
                     /mol_type="genomic RNA"
                     /country="China"
                     /segment="S2"
                     /collection_date="Jul-2010"
                     /host="chicken"
                     /db_xref="taxon:38170"
                     /isolate="GX/2010/1"
                     /organism="Avian orthoreovirus"
     CDS             16..1266
                     /codon_start=1
                     /protein_id="AJA90927.1"
                     /translation="MARAIYDFFSTPFGNRGLATNRTQLSSLLSSSNSPWQRFLSSMT
                     PLTAPGIVSTPEAPYPGSLMYQESMLHSATVPGVLGGRDAWRTFNVFGLSWTDEGLSG
                     LVAAQDPPPAAPYQPASAQWSDLLNYPRWANRRRELQSKYPLLLRSTLLSAMRAGPVL
                     YVETWPNMISGRLADWFMSQYGNNFVDMCARLTQSCSNMPVEPDGNYDQQMRALISLW
                     LLSYTGVVNQTNTISGFYFSSKTRGQALDSWTLFYTTNTNRVQITQRHFAYVCARSPD
                     WNVDKSWIAAANLTAIVMACRQPPVFANQGVINQAQNRPGFSMNGGTPVHELNLLTTA
                     QECIRQWVMAGLVSAAKGQALTQEANDFSNLIQADLGQIKAQDDALYNQQPGYARRIK
                     PFVNGDWTPGMTAQALAVLATFTA"
                     /product="Sigma A"
     misc_feature    118..1251
                     /db_xref="CDD:281127"
                     /note="Reoviral Sigma1/Sigma2 family; Region: Sigma_1_2;
                     pfam03084"
ORIGIN      
        1 gctttttctt ccacgatggc gcgtgccata tacgatttct tttctacgcc tttcgggaat
       61 cgtggtctag cgacgaatcg tactcaactg tcatcactac tatcgagctc gaattcccca
      121 tggcaacgat ttctatcatc aatgactcca ttgacagcgc caggtatcgt ttcaacgcct
      181 gaagcaccct atccaggttc gttgatgtat caagagtcta tgctccacag tgctactgtc
      241 cctggagtac tcggtggtcg tgatgcttgg cgtacattta atgtcttcgg gctttcgtgg
      301 actgatgaag gattgtcagg actagtagct gcccaagatc ctccccctgc cgccccgtat
      361 cagccagcct ctgctcagtg gtcggatctc ctcaactacc ctagatgggc aaacagacgt
      421 cgtgagctgc agtctaaata cccacttctg cttcggtcca cgctgctttc tgccatgcga
      481 gctggtcctg ttctctacgt tgagacgtgg ccgaatatga tctcaggacg attagctgac
      541 tggttcatgt cccaatatgg caacaatttc gttgacatgt gcgccaggtt gacccagtct
      601 tgttcgaaca tgcctgttga gcctgatgga aattatgatc agcagatgcg tgctttaatt
      661 agtttgtggc ttctttcata cactggagtg gtcaatcaga ccaacaccat cagcggcttc
      721 tacttctcct cgaagactcg gggtcaagcg ttggacagtt ggactttatt ctacactaca
      781 aacactaatc gtgttcaaat tacgcagagg catttcgctt acgtgtgtgc tcggtctccc
      841 gactggaacg tggataaatc atggatcgct gcagcgaact taaccgctat cgtcatggct
      901 tgccgtcaac cgccggtgtt cgccaatcaa ggcgttatta accaagcgca gaaccgacct
      961 ggcttttcca tgaatggggg gacgcccgtc catgagctca acttactgac taccgcgcag
     1021 gaatgtattc ggcagtgggt gatggccggt ttggtgtcag cagcgaaggg gcaagcctta
     1081 acgcaggagg ctaatgactt ctcaaacctc atccaggcgg atctgggaca aatcaaagcg
     1141 caggatgatg ctctgtacaa ccagcagcca gggtacgcga ggagaataaa acccttcgtt
     1201 aacggtgact ggacaccagg tatgaccgcg caagctctgg ccgttctagc cacttttacc
     1261 gcctaggcgt agggtcgtac gctgcccgag tccagccctc cggcagcacg tggatgtatt
     1321 catc
//