LOCUS       KJ476708                1192 bp    RNA     linear   VRL 10-DEC-2015
DEFINITION  Avian orthoreovirus isolate GX/2010/1 segment S4, complete
            sequence.
ACCESSION   KJ476708
VERSION     KJ476708.1
KEYWORDS    .
SOURCE      Avian orthoreovirus
  ORGANISM  Avian orthoreovirus
            Viruses; dsRNA viruses; Reoviridae; Spinareovirinae;
            Orthoreovirus.
REFERENCE   1  (bases 1 to 1192)
  AUTHORS   Li,C., Wei,H., Yu,L., Duan,S., Cheng,J., Yan,W., Zhang,X. and
            Wu,Y.
  TITLE     Nuclear localization of the p17 protein of avian reovirus is
            correlated with autophagy induction and an increase in viral
            replication
  JOURNAL   Arch. Virol. 160 (12), 3001-3010 (2015)
   PUBMED   26350773
REFERENCE   2  (bases 1 to 1192)
  AUTHORS   Shu,C., Duan,S., Li,C., Zhang,X. and Wu,Y.
  TITLE     Complete Genomic Sequence of Avian Orthoreovirus from China
  JOURNAL   Unpublished
REFERENCE   3  (bases 1 to 1192)
  AUTHORS   Shu,C., Duan,S., Li,C., Zhang,X. and Wu,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-FEB-2014) College of Veterinary Medicine, Yangzhou
            University, 12 East Wenhui Ave, Yangzhou, Jiangsu 225009, China
COMMENT     GenBank Accession Numbers KJ476699-KJ476708 represent sequences
            from the 10 segments of Avian orthoreovirus.
FEATURES             Location/Qualifiers
     source          1..1192
                     /mol_type="genomic RNA"
                     /country="China"
                     /segment="S4"
                     /collection_date="Jul-2010"
                     /host="chicken"
                     /db_xref="taxon:38170"
                     /isolate="GX/2010/1"
                     /organism="Avian orthoreovirus"
     CDS             24..1127
                     /codon_start=1
                     /protein_id="AJA90929.1"
                     /translation="MDNTVRVGVSRNTSGAAGQTLFRNFYLLRCNISADGRNATKAVQ
                     SHFPFLSRAVRCLSPLAAHCADRTLRRDNVKQILTRELPFSSDLINYAHHVNSSSLTT
                     SQGVEAARLVAQVYGEQVPFDHIYPTGSATYCPGAIANAISRIMAGFVPREGDDFAPS
                     GPIDYLAADLIAYKFVLPYMLDMVDGRPQIVLPSHTVEEMLTNTSLLNSIDASFGIEA
                     RSDQRMTRDAAEMSSRSLNELEDHDQRGRMPWKIMLAMMAAQLKVELDALADERTESQ
                     ANAHVTSFGSRLFNQMSAFVTIDRELMELALLIKEQGFAMNSGQIASKWSLIRRSGPT
                     RPLSGARLEIRNGNWMIREGDQTLLSVSPARMA"
                     /product="Sigma NS"
     misc_feature    24..1121
                     /db_xref="CDD:250679"
                     /note="Sigma NS protein; Region: PolyG_pol; pfam01518"
ORIGIN      
        1 gctttttgag tccttgtgca gccatggaca acaccgtgcg tgttggagtt tcccgcaaca
       61 catccggcgc agctggtcag acactcttta gaaacttcta tttactacga tgtaatattt
      121 cagctgatgg ccgtaatgca acgaaggcgg tacaatccca ctttccattc ctttcacgtg
      181 ctgtgcgatg cctatcgcct cttgccgctc actgtgctga tagaaccctt cgccgtgaca
      241 acgtgaaaca gattcttact cgtgaactgc cattttcctc ggatctaatc aactacgcac
      301 accatgtcaa ttcatcatcc cttactacct ctcagggcgt cgaagcggct cgtttggtag
      361 ctcaagttta tggggaacaa gtaccgttcg atcacattta tcctactggt tcagcgacat
      421 actgtcctgg tgcaatcgca aatgctattt ctcgcattat ggctggcttt gtacctcgtg
      481 aaggtgatga ctttgctccg agtggcccta ttgactacct cgctgctgac ctgatcgcgt
      541 ataagtttgt gctcccttac atgcttgaca tggtagatgg tcgtcctcag attgtcctgc
      601 cttctcatac cgtagaagaa atgttgacca acaccagctt gctgaactcg attgatgctt
      661 catttggtat cgaagcgcgc agtgatcaaa gaatgactcg tgatgctgct gagatgagtt
      721 ctcgctccct caatgaactt gaggatcatg atcagagagg tcgtatgcct tggaagatca
      781 tgctagcgat gatggcggcc caattgaagg ttgagttgga cgcgctggcg gacgagcgta
      841 cggagtcaca agctaatgct cacgttacat ccttcggatc ccgtttattt aatcagatgt
      901 cggcgttcgt tactattgat cgtgaactga tggaactggc ccttctcatc aaggaacagg
      961 gcttcgccat gaattcgggt cagattgcat ctaagtggtc gctgatacgt cgttccggcc
     1021 ctactcgtcc actttcaggt gcccgtcttg aaatcaggaa tggtaattgg atgatccgtg
     1081 agggtgacca aacgctactg tctgtctctc cagctaggat ggcgtagacg ggacccatgg
     1141 tgcgggtgag gggtcgccac accctctgcc gcgacttgga ctcttattca tc
//