LOCUS       KP288862                1996 bp    RNA     linear   VRL 18-MAY-2015
DEFINITION  Avian orthoreovirus isolate SD10-1 segment M3 mu NS gene, complete
            cds.
ACCESSION   KP288862
VERSION     KP288862.1
KEYWORDS    .
SOURCE      Avian orthoreovirus
  ORGANISM  Avian orthoreovirus
            Viruses; dsRNA viruses; Reoviridae; Spinareovirinae;
            Orthoreovirus.
REFERENCE   1  (bases 1 to 1996)
  AUTHORS   Chu,W.
  TITLE     Characterization of ARV isolates in China
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1996)
  AUTHORS   Chu,W.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-DEC-2014) Department of Veterinary Prevention,
            College of Veterinary Medicine, China Agricultural University, No.
            2 Yuan Ming Yuan Western Road, Beijing, Beijing 100193, P.R. China
COMMENT     GenBank Accession Numbers KP288857-KP288866 represent sequences
            from the 10 segments of Avian orthoreovirus SD10-1.
            ##Assembly-Data-START## Assembly Method :: DNAstar v. 6.0
            Sequencing Technology :: SOLiD ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1996
                     /mol_type="genomic RNA"
                     /country="China"
                     /segment="M3"
                     /collection_date="2010"
                     /host="chicken"
                     /db_xref="taxon:38170"
                     /isolate="SD10-1"
                     /organism="Avian orthoreovirus"
     CDS             25..1932
                     /codon_start=1
                     /protein_id="AKH03104.1"
                     /translation="MASTKWGDKPMSLSMSHDGSSIRSAASQFLSVPLSHSTPIPPQR
                     KTVLLKFMIGDELVTVQGALAPFDEYWYDNQPLLAQAVEMLASADRLRQFEHYEKFLL
                     KKGHQITEIMNRLRLFFTDVLKVKMEADALPALAQYLMVGTLEAVSTADSPDACVPVT
                     SKILAKQQTIAKSPGRLDEEEYNVIRSRFLTHEVFDLTSDLPGVQPFMDMYYATVPRA
                     DSTGWCVYRRKGLLIYAPDEQFSDLTIFSTRLTASRELQLVAGDVVVACFDLMDVSDI
                     APSHHASVQEERTLGTSKYSNVTANDHPLVFFSPSALRWAIDHACTDSLVSTRNIRVC
                     VGIDPLVTRWTRDGVQEAAILMDDKLPSAGRARMALRTLLLARRSPMPSFLLGALKQS
                     GGQLLEHYRCDAANRYGSPTVPISHPPPCSKCPELKEQIAKLSSSPIPKVDSSVGPAV
                     LLSKIADLQRANRELSLKLVDVQPAREDHLLAYLNEHVCVNAKDHEKGLLARCNVSGD
                     SISSILGQRMKNRERFETRLRHEASAEWEPRVEALNQELAKARVEQQDMMTQSLQYLN
                     ERDELLQEVDELKRELTTLRSANVRLNADNHRMSRATRVGDAFVSDVEPLPSGIPGES
                     KPSMEELVDDL"
                     /product="mu NS"
ORIGIN      
        1 gctttttgag tcctagcgtg gatcatggcg tcaaccaagt ggggagacaa gccgatgtcg
       61 ctctcaatgt ctcacgatgg atcatctatc cgcagtgctg cctcacaatt cttatcggtt
      121 cctctgtctc actcaacgcc tatcccacct caacggaaga ctgtgctgtt gaagtttatg
      181 attggtgacg aactggttac cgttcagggt gctctcgctc cgttcgacga atattggtat
      241 gacaaccagc ccctgttagc tcaggctgtt gagatgctcg cctctgcaga tcgtttgcgt
      301 caatttgagc attatgagaa attcctactc aagaaaggtc accagataac tgagatcatg
      361 aacaggttac gtctcttttt tacggatgtt ctcaaagtta agatggaagc tgacgcttta
      421 cccgctttag cccaatatct gatggttgga accttggagg ctgtttccac cgctgattcc
      481 cccgatgcct gcgtcccagt cacctcaaag atcttagcta agcagcagac tattgctaag
      541 tctcctggac gtctcgacga ggaagaatat aatgttattc gatcacgttt cctcacgcat
      601 gaagtcttcg acttaacgtc cgatttaccc ggagtacaac cgtttatgga catgtactac
      661 gccactgtcc cccgtgctga ttctacagga tggtgtgtgt atcgtcgaaa gggtttgctt
      721 atctacgctc ctgatgagca attctcggat ctgactattt tctccacacg tcttactgca
      781 tcacgtgagc tgcagcttgt ggctggagat gttgtcgtag cctgctttga tctcatggac
      841 gtctctgaca ttgctccatc tcatcatgca tcagtgcagg aagagcgtac tctcgggacc
      901 agtaagtatt cgaatgtgac ggctaatgat catcctctgg tattcttctc acccagtgcg
      961 ctccgttggg caattgacca tgcttgtact gactccttgg tttctacccg gaatattcgt
     1021 gtctgcgttg gcatcgatcc tctggtaact cgatggaccc gagatggtgt gcaagaggct
     1081 gctattctca tggatgacaa gctaccctca gcaggtcgtg cgcgtatggc gttgcgaaca
     1141 ttgcttctcg ctagacggtc tccaatgcca tccttcttac tcggtgcgct aaaacagtca
     1201 ggcggtcagt tactggagca ctaccgatgc gatgcagcta atagatatgg atctcccacc
     1261 gttccgatct cccatccgcc accatgctca aagtgtcctg agctaaaaga acaaattgcc
     1321 aagctctcgt catcgcctat acccaaagtc gattcgtccg ttggtccagc cgtactgctg
     1381 tctaaaattg ctgaccttca gcgtgctaat agagaactgt cactgaaact ggttgatgtt
     1441 caacctgctc gggaagatca cttgttggct tatctcaatg aacacgtgtg tgtaaatgct
     1501 aaagatcatg aaaagggcct gctcgctcgt tgtaacgtat ctggtgattc aatctcctct
     1561 atccttggcc agcgcatgaa gaatcgggaa aggtttgaaa ctcgactgcg tcatgaggct
     1621 agtgctgagt gggaaccccg tgtggaagcg ttaaaccaag aattggctaa agctcgtgtc
     1681 gaacagcagg acatgatgac tcaatcccta cagtacctga acgagcgtga tgaactactc
     1741 caggaagtgg atgagcttaa gcgtgagctg actaccctgc gttccgctaa cgtacgcttg
     1801 aatgctgaca atcatcggat gagtcgtgcg acacgtgtcg gagacgcctt cgtcagtgac
     1861 gtcgagccgc taccctctgg catacctggt gaatcgaaac catctatgga agaattggtg
     1921 gatgatctgt gagctttgac ctgtgactcg acttctctct gattccatgt acccacggcg
     1981 gactcggtta ttcatc
//