LOCUS       KP288865                1202 bp    RNA     linear   VRL 18-MAY-2015
DEFINITION  Avian orthoreovirus isolate SD10-1 segment S3 sigma 2 gene,
            complete cds.
ACCESSION   KP288865
VERSION     KP288865.1
KEYWORDS    .
SOURCE      Avian orthoreovirus
  ORGANISM  Avian orthoreovirus
            Viruses; dsRNA viruses; Reoviridae; Spinareovirinae;
            Orthoreovirus.
REFERENCE   1  (bases 1 to 1202)
  AUTHORS   Chu,W.
  TITLE     Characterization of ARV isolates in China
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1202)
  AUTHORS   Chu,W.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-DEC-2014) Department of Veterinary Prevention,
            College of Veterinary Medicine, China Agricultural University, No.
            2 Yuan Ming Yuan Western Road, Beijing, Beijing 100193, P.R. China
COMMENT     GenBank Accession Numbers KP288857-KP288866 represent sequences
            from the 10 segments of Avian orthoreovirus SD10-1.
            ##Assembly-Data-START## Assembly Method :: DNAstar v. 6.0
            Sequencing Technology :: SOLiD ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1202
                     /mol_type="genomic RNA"
                     /country="China"
                     /segment="S3"
                     /collection_date="2010"
                     /host="chicken"
                     /db_xref="taxon:38170"
                     /isolate="SD10-1"
                     /organism="Avian orthoreovirus"
     CDS             31..1134
                     /codon_start=1
                     /protein_id="AKH03109.1"
                     /translation="MEVRVPNFHSFVEGITSSYLKTPACWNAQTAWDTVTFHVPDVIR
                     VGNAYCCSQCCGVLYYGTLPADGNYFPHHKCHQQQYRTDTPLLRYVRIGRTTEHLLDQ
                     YAVALESIADHYDEISQRMVDEPENDEVAPLDIVTRTESIRSDKTVDPDFWTYPLERR
                     SDDSRRDIAASCWRMIDASSRSLTLPNCLVSPSLHSRSVFGQMQTTTTIYDVAASGKA
                     AKFSPMVATLSQRDAGPVTLANADPAEGVYSFWTSHFAFSPLIGGVGITGQYARESYH
                     HVGHPVIGSGKKASHYRNLFMESWRGWSKSAFACATGMEPAECESRLRGHARTMLGRS
                     LPNVCDDEVAQQSGAVLTSLQKTTKFTVVKCGW"
                     /product="sigma 2"
ORIGIN      
        1 gctttttgag tcctcagcgt gcaagccgca atggaggtac gtgtgccaaa ctttcactcg
       61 ttcgttgaag gaataacatc tagctatttg aagactcctg cttgctggaa tgcacagaca
      121 gcttgggaca ctgtgacttt tcacgtccct gatgtaatta gagttggcaa tgcgtattgt
      181 tgctctcaat gttgtggtgt gctttattac gggactctgc ccgcggatgg aaattacttc
      241 cctcatcaca aatgccatca gcaacagtac aggaccgata ccccactgct ccggtatgtg
      301 cgaattggca gaacgactga gcatctgttg gaccaatatg ctgttgcgct ggagtctatt
      361 gctgatcact atgatgaaat cagtcaacgc atggtcgatg agccagagaa cgatgaagtc
      421 gcgccccttg acattgtaac gcgtactgaa tctatccgaa gtgataagac ggttgacccg
      481 gacttttgga cttacccgct tgagcgacgt tctgatgatt ctcgtcgaga catcgccgca
      541 tcatgctgga gaatgattga tgcatcatca cgtagtctca ctcttccaaa ttgtcttgtg
      601 tccccgtctt tgcattctcg ttccgtcttt ggtcaaatgc aaacgaccac caccatatac
      661 gatgttgcgg cgtcgggaaa ggccgctaaa ttttctccga tggtggctac actatcgcaa
      721 cgtgatgctg gccctgtaac gcttgcgaat gctgacccag cggaaggtgt atattcattt
      781 tggacgtcgc acttcgcctt ctcaccgctc attggtggag ttgggattac gggacagtac
      841 gctcgtgagt cataccatca cgtgggtcat ccagtgattg ggagtggtaa gaaggcgtca
      901 cactacagaa atctgtttat ggaatcatgg cgtgggtggt caaagtcagc tttcgcatgc
      961 gctacaggaa tggagccagc tgaatgtgaa tctcgtctga ggggacatgc tcgcactatg
     1021 cttggacgct ctctgccgaa cgtctgtgac gacgaggttg ctcagcagtc tggcgccgtg
     1081 ctaacgtccc tgcagaagac taccaagttc actgttgtga agtgtggttg gtaagtacct
     1141 ccgggtcaaa atgcacatag gctcccacat atgtgacggt tagcgggact cgcatattca
     1201 tc
//