LOCUS       KJ874263                1996 bp    RNA     linear   VRL 11-FEB-2015
DEFINITION  Avian orthoreovirus isolate Turkey/USA/MN/2011/TARV-MN4 muNS gene,
            complete cds.
ACCESSION   KJ874263
VERSION     KJ874263.1
KEYWORDS    .
SOURCE      Avian orthoreovirus
  ORGANISM  Avian orthoreovirus
            Viruses; dsRNA viruses; Reoviridae; Spinareovirinae;
            Orthoreovirus.
REFERENCE   1  (bases 1 to 1996)
  AUTHORS   Mor,S.K., Marthaler,D., Verma,H., Sharafeldin,T.A., Jindal,N.,
            Porter,R.E. and Goyal,S.M.
  TITLE     Phylogenetic analysis, genomic diversity and classification of M
            class gene segments of turkey reoviruses
  JOURNAL   Vet. Microbiol. 176 (1-2), 70-82 (2015)
   PUBMED   25655814
REFERENCE   2  (bases 1 to 1996)
  AUTHORS   Mor,S.K., Verma,H., Marthaler,D., Sharafeldin,T.A., Porter,R.E.,
            Jindal,N. and Goyal,S.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-MAY-2014) Department of Veterinary Population
            Medicine and Veterinary Diagnostic Laboratory, University of
            Minnesota, 1333 Gortner Ave, Saint Paul, MN 55108, USA
COMMENT     ##Assembly-Data-START## Assembly Method :: Sequencher v. 5.1
            Sequencing Technology :: Sanger dideoxy sequencing
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1996
                     /mol_type="genomic RNA"
                     /country="USA"
                     /isolation_source="tendon"
                     /segment="M3"
                     /collection_date="2011"
                     /host="turkey"
                     /db_xref="taxon:38170"
                     /isolate="Turkey/USA/MN/2011/TARV-MN4"
                     /organism="Avian orthoreovirus"
     CDS             25..1932
                     /codon_start=1
                     /protein_id="AIT18550.1"
                     /translation="MASTKWGDKPMSLSMSHDGSSIRSAASQFLSVPLSHSTPIPPQR
                     KTVLLKFMIGDDLVTVQGALAPFDEYWYDNQPLLAQAVEMLASEDRLRHFEHYEKFLL
                     KKGHQITEIMNRLRLFFTDVLKVKMEADALPTLAQYLMLGDLEVVSTDHSPDACVPVT
                     SKIVTKQQTIAKSPGRLDEEEYNVIRSRFLTHEVFDLTSDLPGVQPFMDMYYATVPRA
                     DSTGWCAYRRKGLLIHAPDEQFSDLTIFSTRFTASRELQLMAGDVVVACFDLMDVSDV
                     APSHHASVQEERTIGTSRYSNVTANDHPLVFFSPNALRWAIDHACTDSLVSTRNIRVC
                     VGIDPLVTRWTRDGVQEAAILMDDKLPSAGRARMALRTLLLARRSPMTSFLLGALKQS
                     GGQLIEHYRCDAANRYGSPTVPTSHPPPCSKCPELKEQIAKLSSSPIPKLNSATGPTV
                     LLSKIADLQRANRELSLKLVDVQPAREDHLLAYLDEHVCVNAKDHEKDLLARCNVSSD
                     SISSILGQRAKNRERFETRLRQEASAEWEPRVEALNRELAEARVEQQDLMTQSLQYLS
                     ERDELLHEVDELKRELATLRSANVRLNADNHRMSRATRVGNAFVSDVEPLPSGIPGES
                     KPSMEELVDDL"
                     /product="muNS"
                     /note="nonstructural protein"
ORIGIN      
        1 gctttttgag tcctagcgtg gatcatggcg tcaaccaagt ggggagacaa gccgatgtcg
       61 ctctcaatgt ctcacgatgg atcatctatc cgcagtgctg cctcacaatt cttgtcggtt
      121 cccctatctc attcaacgcc catcccacct caacggaaga ctgtactgct gaagtttatg
      181 attggcgatg acctggttac tgttcagggt gccctcgccc cgtttgacga gtattggtat
      241 gataatcagc ccctgctggc ccaagctgtt gagatgcttg cctctgagga tcgtttgcgt
      301 cattttgagc attatgagaa atttttactt aagaaaggtc atcaaataac tgagatcatg
      361 aacaggctac gcctattttt cacggatgtt cttaaagtca agatggaagc tgacgcttta
      421 cccaccctag ctcaatatct aatgcttgga gacctagagg ttgtctctac cgatcactca
      481 cctgatgctt gcgtcccagt cacctcgaaa attgtgacta agcagcagac cattgctaaa
      541 tcccctggcc gtctcgatga ggaggaatac aatgttattc gatcacgctt cctcactcac
      601 gaagttttcg acttaacgtc tgatttaccc ggagtgcaac cgttcatgga catgtattat
      661 gctactgttc cccgtgctga ctctacaggg tggtgcgcgt atcgtcgaaa gggcttactc
      721 attcacgctc ctgatgagca attctcagat ttgactatct tctccacacg tttcacggcg
      781 tcacgtgagc tacagcttat ggctggagat gtcgtcgtag cttgctttga tcttatggac
      841 gtttctgacg ttgctccatc tcatcatgca tcggtgcagg aggaacgtac tatcgggact
      901 agtcggtatt cgaatgtaac ggctaatgat catcccttgg tgttcttctc acccaatgcg
      961 ctccgatggg caattgatca tgcttgtacc gactctttgg tttctactcg gaatattcgt
     1021 gtttgtgttg gtatcgaccc attggtaact agatggactc gagacggcgt gcaagaggct
     1081 gctattctca tggatgataa gctaccatca gctggtcgtg cgcgtatggc gttgcgaaca
     1141 ttgcttctcg ctaggcgttc accaatgaca tccttcttac tcggcgcctt aaagcagtca
     1201 ggcggtcagc taatagagca ctatcgatgc gacgcggcta acaggtacgg gtcccccacc
     1261 gtcccgactt cccatccgcc accctgctca aagtgtcctg agctaaagga acaaattgcc
     1321 aagctctcgt catcgccgat acccaagctc aactcggcca ctggtccaac cgtactgctg
     1381 tctaaaatcg ctgacctcca gcgtgcgaat agggaactgt cactgaaact agtcgatgtt
     1441 caacctgcta gggaggatca tttgttggct tatcttgatg aacacgtgtg cgtaaatgct
     1501 aaggatcatg aaaaagacct gcttgctcgt tgtaatgtat ctagtgattc aatctcttcc
     1561 atccttggtc agcgtgcgaa gaatcgtgaa aggtttgaga ctcggttgcg acaggaggct
     1621 agtgctgagt gggaacctcg tgtggaagcg ttaaaccgag agttggctga agctcgcgtg
     1681 gaacagcagg acttgatgac tcaatctcta cagtatttaa gtgagcgtga cgaactgctc
     1741 catgaagtgg atgagcttaa gcgtgaactg gctaccctgc gttccgctaa tgtacgattg
     1801 aatgctgata accatcggat gagtcgtgca acccgtgtcg ggaacgcgtt cgtcagtgac
     1861 gtcgagcctc taccctctgg catacctggt gaatcgaaac catctatgga agaattggtg
     1921 gatgatctgt gagctttgac ctgtgactcg gcttctctct gattccatgt acccacggcg
     1981 gactcggtta ttcatc
//