LOCUS KF741768 3907 bp RNA linear VRL 30-NOV-2014 DEFINITION Avian orthoreovirus strain attenuated vaccine strain S1133 segment L3, complete sequence. ACCESSION KF741768 VERSION KF741768.1 KEYWORDS . SOURCE Avian orthoreovirus ORGANISM Avian orthoreovirus Viruses; dsRNA viruses; Reoviridae; Spinareovirinae; Orthoreovirus. REFERENCE 1 (bases 1 to 3907) AUTHORS Teng,L., Xie,Z., Xie,L., Liu,J., Pang,Y., Deng,X., Xie,Z., Fan,Q. and Luo,S. TITLE Direct Submission JOURNAL Submitted (17-OCT-2013) Department of Biotechnology, Guangxi Veterinary Research Institute, 51 You Ai Road, Nanning, Guangxi 530001, China FEATURES Location/Qualifiers source 1..3907 /mol_type="genomic RNA" /db_xref="taxon:38170" /strain="attenuated vaccine strain S1133" /segment="L3" /organism="Avian orthoreovirus" CDS 13..3870 /codon_start=1 /protein_id="AIS22931.1" /translation="MAQIRGLRLSTTLSAPPPRKIVTSHTYDELISALKLTTKPWRSL KSRGNDSITAVRLLFPLNGYIEPMLMLEKDMTYDAFESWITPLLSALADQLLRHYPIA TYHGRLINPLLTNAVVAAFLSNVPYAHALDHLFLVRGNVEDIMDAGITIQNHLWFDRG AIVTPAGQKFVQLTGYNFSSNDPCLFSKQLRCYGLVYYFLNMSDCLTYCWRHLSNSTP LMHFDRPSNGIHCLVPSESTTPIAGSLPVSALSSILLESCLQQSSLNALTPTGSPVVR QVEVLLPLSSPFFERQNTLEYSLFALSNALINGYQFVGLRPGHPDCATVAAVLARLTD FSKGITVIQPRPALFTVNHDSPLTYSGENANFIHRLASVSGRSIGPVVIGKSVDHAVG WMPQFDPATSYNPDLSLDSLSRATTLPLRAKYSTFWSGPALFSFASCDRHNGVYDIQF MAQFPPTYFSDDDAFSRSRFSSYRAVKDRSLLKDTANLMYISSLSSAHDHRLVPDSKT MIYVGSSGTHADNQPSIIKPLLAGSLPGVFRPLSVKQIGWEVTNGTICDIELPLATGT FFFVYSDVDQVQSGDSDLDASSRRFCSQLDMLMKLTFTGGSLVVKCNFPTNLVWRHIF STISPYFSSIHLMKPLVSNNLELYFLFAERLPVPDAAFRPSADAVVFWRSQLQRYRVL RDSFSNVPSIGSTLTLDDSLTVSVLNFVDVTSLSSIEDQRALSAFSVLTSLGSQKLSL HPYFDSYRTQLTGIITPHSRNILNRLAYVPRVFPSTIDVQHRVMAASDPEIFGFRSNS WTQLSFFYDATLTATDFTDVKHWLDLGTGPEARPLSFPPTDLPVTLCDTRPFVFPSGC WATFTDFLSYDYLVTNVVLSTGADVVSCVLSLGAACADANMTLHEGVRQLISQCVDAS VKTLFLQLNCPLPSAGDVSREILELVQTNSTYVFHTLGRIEPFIPYSALLEIVEALCP GIVVEIKTMDSSLSWLDYAVQSNASVTSDDIVLAMRLSHFCPLFVFHFDRHSAQFPDD ARVGAPFTVTLLDYEDTRSYEVTLDNVAIATITAGALVGFSSGVSVTSSNNQLVMTID PASPGILSVIQVLPARISLGSCVIEAPDPSLSLIFPATLDTSLSGTDLELRLSDWYDV ALFYVDEAHSRLLPVSDTKYEIHRKDQAPNSRVINYIFDRSDVFFKLVLCDVSPSGIG RFIYRELPELSSPVWPDDARTFLSIPFESPMVIVSPDGPVNYDGANFTPPTSWLTVDG STCVIDGRPSFYVPPGRYGLVRV" /product="lambda-C protein" misc_feature 13..3861 /db_xref="CDD:283634" /note="Reovirus core-spike protein lambda-2 (L2); Region: Reovirus_L2; pfam06016" ORIGIN 1 gcttttccac ccatggctca gattcgaggc cttcggttgt ctacgacact ctcagctcca 61 ccaccaagaa agattgtaac ctcgcatacg tacgatgaac taatctccgc tttaaagttg 121 acaaccaaac cttggcgctc tttaaaatca cgcggcaatg actcaatcac agcagtccgg 181 cttctatttc cccttaatgg ttacattgag cccatgctta tgttagagaa ggacatgaca 241 tacgatgctt ttgagtcttg gattacgccc cttctttctg ctctagctga ccagttgctt 301 agacactacc ctattgctac ttatcacggg cggttgatta acccgttgtt aaccaatgct 361 gttgttgccg ctttcttatc gaatgtgccc tatgcgcacg cattggatca tctttttctg 421 gttcgtggga acgttgagga tattatggat gcaggaatca caattcagaa tcatttatgg 481 tttgaccgtg gtgctatagt aactccggcc gggcagaagt ttgttcagtt gactggctat 541 aatttttcat ccaatgatcc gtgcttattt tctaagcaat tgcgttgtta tggtcttgtt 601 tattatttcc ttaacatgtc cgattgtctg acgtactgtt ggcgtcatct ctctaactcg 661 actcctctga tgcattttga tcgtccgtcc aacgggattc attgcttggt gccctccgaa 721 tccacgacac ctatcgccgg ttcattacct gtgtcagctc tcagctccat tctgctggag 781 tcttgtcttc agcaatcctc acttaatgct cttactccta ctggctcccc agtcgttagg 841 caggtggaag tgctgctacc tctatcgtca ccatttttcg aacgtcaaaa tactctggaa 901 tattctcttt ttgctctttc gaatgctctg attaatggtt atcaattcgt tggtttacgt 961 cccggacatc cagattgcgc taccgttgct gctgttttag ctaggttaac tgatttctcg 1021 aaaggtatca ctgttattca accacgccct gctcttttca ctgttaatca tgatagtcct 1081 ctgacgtaca gtggagagaa tgctaatttc atccaccgct tagcttctgt gtctggaaga 1141 tctattggtc ccgtcgttat tgggaaatct gtcgatcatg ccgtcggttg gatgcctcag 1201 tttgatcccg ctacatcgta caatcctgat ttatcattag attcactctc acgagctacg 1261 acactgccac tccgtgctaa gtattctact ttctggtctg gccccgcgct cttttccttt 1321 gcttcgtgtg acaggcacaa tggcgtgtat gacattcagt tcatggccca atttcctcct 1381 acgtatttca gcgatgatga tgccttttct aggtcaaggt tttcttccta tcgtgctgtt 1441 aaagatcgat cgttgttaaa agatactgcc aatttgatgt acatttcaag cttatcgagc 1501 gcgcatgacc atcgtcttgt ccctgattct aagaccatga tttacgtagg gtcttccggt 1561 acgcatgcag ataaccaacc ttccattatt aaacctcttt tagctgggtc tcttccaggt 1621 gttttccgcc ccctatccgt gaagcagatt ggttgggagg ttactaacgg gactatttgt 1681 gacattgagc tgcctttagc taccggcaca ttcttcttcg tgtacagtga cgtggaccag 1741 gttcagtcag gcgattccga cctagacgct tcctcccgac gcttttgctc tcaattggat 1801 atgttaatga aattgacgtt tactggcggt tccttagttg tcaagtgcaa ttttccgact 1861 aacttggttt ggcgtcatat cttttctacc atttctccct atttctcgtc cattcatctg 1921 atgaagcctc ttgtgtcgaa taatttggag ttgtacttct tatttgcaga gcgtttgcct 1981 gtccctgatg ccgcattccg tccgtcggcg gatgctgtcg ttttctggcg atctcaactg 2041 caacgctacc gggtattgcg cgactcattc tctaatgtac cctctatcgg ctctactctt 2101 accttagatg actcattgac tgtatctgtt ctgaattttg tcgatgtcac ttccctttcc 2161 tccattgagg atcaacgagc tttatccgct ttctcagtcc ttacctcctt ggggtctcag 2221 aagttatcgc ttcatcccta ctttgatagt tatcgcacac agctcactgg aataatcact 2281 ccccattctc gtaacatctt aaatagatta gcgtacgtcc cgcgcgtctt cccttcaacg 2341 atcgacgttc aacatcgtgt catggctgcc tcagatcccg agatttttgg ttttcgctcc 2401 aattcgtgga ctcaattgtc ctttttctac gatgctacgt tgactgcgac ggattttact 2461 gatgtgaagc attggttgga tctgggaact ggacccgaag cgcgaccgtt gtcttttccg 2521 ccgactgatc ttcctgtcac attgtgcgac actcggcctt tcgtttttcc gtctggctgt 2581 tgggccacgt tcactgactt cttaagttat gattacctcg ttacgaacgt cgttttatca 2641 actggtgccg atgttgtgtc ctgcgttctc tccctagggg cagcctgcgc tgacgctaac 2701 atgactctac atgagggcgt gcgtcaacta atttcccagt gcgtagatgc tagtgttaaa 2761 acgctgtttt tgcagcttaa ttgtcccctt ccatcagcgg gtgatgtgtc tcgggagatc 2821 ctcgagttgg ttcagactaa ttcaacatac gtattccata ccttaggtcg tattgagccg 2881 ttcatcccat attccgctct cttggaaata gtcgaggctt tgtgccctgg catcgtcgtt 2941 gagattaaaa cgatggattc ttctctttca tggcttgact acgctgttca atctaatgca 3001 tcagtgacgt cggacgacat tgtcttagcg atgcgtttgt ctcacttctg tcctcttttt 3061 gtgtttcatt ttgaccgtca ttctgctcaa ttcccggatg atgcgcgtgt tggtgctccc 3121 ttcaccgtca cattgttgga ttatgaagac actcgatcat atgaggtgac tttagacaat 3181 gtcgctattg ctactattac tgcaggcgct ctagtcggat tttcatctgg tgtaagtgtc 3241 acctcatcca acaatcagct ggttatgact attgatcctg cgagtccagg aattctttct 3301 gtcattcagg tactccccgc tcgcatctca ttaggcagct gcgtgataga ggcgccggac 3361 ccatcccttt ctctgatttt tcctgcgaca ttagatactt ccttgtcagg gaccgacctg 3421 gagttacgtc tgtctgactg gtatgacgtc gctctcttct acgtcgacga agcgcactct 3481 cgactgctgc ccgtatccga taccaagtac gagattcatc gtaaggatca agcgccgaat 3541 agtcgagtaa tcaactatat ctttgatcgt tctgacgtgt tctttaaatt ggtgctgtgc 3601 gacgtctctc catctggaat aggtcgcttc atctatcgtg agttaccgga gctaagttcc 3661 cctgtatggc ctgatgatgc gcgtactttc ttatccatac catttgaatc ccctatggtg 3721 attgtatcgc cggacggacc cgttaactat gacggtgcca acttcactcc tccaacttca 3781 tggcttacag ttgacggcag cacctgcgtc atagatggcc gtccctcatt ttacgtgccc 3841 cctggccgat atggtctggt gagagtctaa acgaccgcgg gcctccagta aaagggtgtt 3901 attcatc //