LOCUS AY641739 3958 bp mRNA linear VRL 01-JUL-2005 DEFINITION Avian orthoreovirus strain 919 core protein lambda A mRNA, complete cds. ACCESSION AY641739 VERSION AY641739.1 KEYWORDS . SOURCE Avian orthoreovirus strain 919 ORGANISM Avian orthoreovirus strain 919 Viruses; dsRNA viruses; Reoviridae; Spinareovirinae; Orthoreovirus. REFERENCE 1 (sites) AUTHORS Song,C.H., Su,Y.P. and Lee,L.H. TITLE Avian orthoreovirus strain 919 core protein lambda A (L1) mRNA JOURNAL Unpublished REFERENCE 2 (bases 1 to 3958) AUTHORS Song,C.H., Su,Y.P. and Lee,L.H. TITLE Direct Submission JOURNAL Submitted (30-MAY-2004) Department of Veterinary Medicine, College of Veterinary Medicine, National Chung Hsing University, 250 KuoKuang Road, Taichung, Taiwan 402, Republic of China FEATURES Location/Qualifiers source 1..3958 /mol_type="mRNA" /db_xref="taxon:253449" /organism="Avian orthoreovirus strain 919" CDS 21..3902 /codon_start=1 /protein_id="AAV52823.1" /translation="MSSRKVARRRHKDATESKDTKDTNKSKPSSIDAKESTDSATDKK VTAPPPNNPAASTPSSTDGASQTSVAKQTNDNDASVKESAPKPTVSSDGKDGMHGAVK SQDAKATVAVDNNKDRDVVFGGAGSGDKNAITKTGSVDNDGGVKVVPAKDATISSAKA MMEQKQLVAGLPKQPKSANHLCTVCMAQFASADALTIHQTTHSIGSNAALTSFSISTA VEEFIQSWAAATSTANTKTALTVSDVDSLMMTEGIRLITWDSGLCTSFELVPIVHSNT VQDVISYSWFTSSYNITTPFPQATVVRIVLRTNWAAKLDSPSSSRECDLRLAPPTESN ARSFSMLLNTGATPEGTFNPNTLRMNVLQMCLQYVLANLHLNRSTQFTMDLTAAAPNL SASQLRIVPEDKEGKWFPVMYPSRVNIPLFNKTADFVNQCIRDRIGRYDRAQTFAGAP SEWADMWETADALTLSVREMWMSRISQMNITPADIADAISRCSQSLLTVAAPTAPSVA RLLPWRVSSDERQLLQLLMYLNVGTSADYVQPILSAFARTLSRVSPLRINPTLIANAM STIVESTTNTQSPAAAILSKLKPVASDFSDFRLACAAWLYNGCVQTYLSEDSYPSSGG SVTSIDTLIDMFVCLLALPLVTDPNAPCQAFMVVANAMVGYENLPMDDPNFTQQRLAA AFNNPTTWPQCFLHPQNIDRRQCPILSWWAQQIHRNWPTPSQITYGAPDIIGSANLFT PPDVLLLPLQHRPIRITNPTLNFDNELTTWRNTVVDLVLRIIDSGRYQPNWNQSIRAS MRNAMTNFRIIKSYTPAYIAELLPVELAAIAPTLPFQPFQVPFARLDRDAIVTHVNVS RQAPNNLAQPALNMSMTYQRTGVPISLSARPLAVALLSGQYPTDPPLQTNVWYVNTLT PLYSNDGLFNNVQHAMVASEAYATLITMLAQCTDMQYPVDRPLNWLRQINLAANEATI FGRSINSLFQTAFDLSPSTVLLQPFLESDPRATQLAISYVRYNGDSETFVPTVRPSMI SEATLLVERTLSHEYNLFGLCRGDIILGQHMTPTAFNPPAPPPSVIFNRGDADVYEFG SRSFANFGMNGEEILVMDANGVRRPLLGRWVMPLQLLMVNIGVFPKLLLDRILKGRLY IRLEVGAYPYTVQYYQGREFTDGFTLLEQWMSKVSPMGIPPVPFLMPQSEGHNITSGM VTHYIWSTEYNDGSLFATNTDLPVTVFGPDRTIPIERYRALVDPGALPATNQLPHTID LYCSLRRYYLETPPITATVTTYGDGLPALNH" /product="core protein lambda A" /note="L1" ORIGIN 1 gcttttctcc gaacgccgaa atgagttcgc gcaaagtggc tagacgtcgt cataaggatg 61 ctactgaatc taaggacact aaagacacta ataaatctaa gccatcttct attgatgcta 121 aagaatctac ggatagcgct acggataaga aagtcactgc tccaccacca aataatccgg 181 ctgcttctac tccctcctcc actgatgggg cttcccaaac atctgtcgct aagcagacga 241 atgataatga cgcctcagtt aaggaatcag ctcccaagcc tactgtctcc agcgacggga 301 aagatgggat gcacggtgct gtgaagtcgc aagacgctaa ggctaccgta gctgtagata 361 ataataagga tagagatgta gtatttggtg gtgcaggttc tggtgacaag aatgctatca 421 cgaaaactgg ctccgttgac aatgatgggg gtgttaaggt cgttccagcc aaggatgcta 481 cgatatcttc ggccaaagcc atgatggagc aaaagcagtt agtcgctggt cttccgaaac 541 aaccgaagtc tgctaatcat ctgtgtaccg tctgcatggc tcagtttgcg tcagctgacg 601 ctcttactat tcaccaaact acgcattcta ttggttccaa cgcggctctg acgagttttt 661 cgatctctac tgctgttgaa gaattcattc aatcatgggc tgctgccaca tccacggcta 721 acaccaagac ggctttgact gtgtctgacg ttgactcact gatgatgact gaaggaatac 781 gccttataac ttgggattct gggttatgca cgtcttttga gcttgtcccg atcgtccatt 841 caaacactgt tcaagatgtt atttcatatt catggtttac gtcaagctat aacatcacga 901 ctcccttccc acaagcgact gtcgtgcgga ttgtcttgcg tactaactgg gctgccaaat 961 tggattctcc ctcttcgtcg cgtgaatgtg atcttcgtct tgctccacct acagagagca 1021 atgctcgatc attctcaatg ctactcaata cgggtgcgac tccagaaggc actttcaacc 1081 ccaacaccct tcgtatgaac gtgctgcaga tgtgtcttca gtatgttcta gctaacttgc 1141 acctgaaccg tagcactcag tttaccatgg atttgactgc cgcggctccc aatctatctg 1201 cgtctcaact ccgtatcgtt ccagaggata aggagggtaa atggtttcct gtcatgtatc 1261 catcccgagt gaacatccca ctgttcaaca agacggctga ttttgttaat cagtgcattc 1321 gtgatagaat tggtcgatac gatcgcgccc agacttttgc tggtgcacct tctgaatggg 1381 ctgacatgtg ggaaacagca gacgcgttaa ctctctccgt ccgtgaaatg tggatgtcac 1441 gcatttctca aatgaacatt actcccgctg atattgctga cgctatctcc agatgttctc 1501 agtctttgct cactgttgcc gcgccgacag ctccttctgt ggctcgtttg ttaccttggc 1561 gggttagttc tgatgagagg cagctgctcc aactgctgat gtacttaaat gttggtacta 1621 gtgctgacta cgttcaaccg attctgtctg cgttcgctcg aactctgtct cgtgtgtcac 1681 cactgcgaat taatcctacc ctaatcgcta atgctatgtc gacaattgtc gagagcacta 1741 ctaatactca gagtcctgct gcggctatct tgtcaaagct taaacctgtc gcatctgatt 1801 tttccgactt taggttggca tgtgccgctt ggttatataa tggttgtgtc cagacatact 1861 tgtctgagga ttcgtatccg agcagcggtg ggtctgtcac tagcatcgac acgttgattg 1921 atatgtttgt gtgtttgctg gcgttgcctc tggttactga tcctaacgct ccttgtcaag 1981 cctttatggt tgtcgctaat gctatggttg gttacgagaa cctgcctatg gacgacccta 2041 attttactca gcagagactg gctgcagcgt tcaataatcc tactacctgg cctcaatgct 2101 tcctccaccc tcaaaatatt gatcggcgcc agtgtccgat tctttcatgg tgggctcagc 2161 agattcatcg taattggcct acaccatctc agattactta tggtgcgcct gatatcatcg 2221 gctccgctaa cttgttcact ccccctgatg tgttgctgct tccattacaa cataggccca 2281 tccgtatcac caatcccacc ctgaacttcg ataatgagtt gacgacttgg cgtaacaccg 2341 tggttgattt agtcctgcgc attattgaca gtggtcggta ccagcctaat tggaatcagt 2401 ctattcgtgc gtctatgcgg aatgcgatga cgaatttcag gattattaag tcctatacac 2461 ctgcttacat agcagaattg ctacctgtgg aactggcggc tatcgctcca actctaccct 2521 tccagccttt ccaggtgccg tttgctcgct tagatcgtga cgctatcgtc acccatgtca 2581 atgtgtccag acaagctccc aacaatcttg ctcaacctgc attgaacatg tccatgacgt 2641 accagcgcac aggagttcca atctctctta gtgcccgtcc cttggccgtc gctcttttat 2701 caggtcagta tcctactgat cctcctcttc agaccaatgt ttggtacgtg aacactctca 2761 cacctctata ttccaatgat ggtctcttta acaacgtgca gcatgctatg gttgcttctg 2821 aagcttacgc aactttgatc actatgctgg ctcagtgcac tgacatgcag taccccgtgg 2881 atcggccatt gaactggctt cgtcagatta atttggctgc caatgaagcg acgatttttg 2941 gtcgctcaat taactcactt ttccaaaccg cttttgacct ctcaccctct actgtgttgc 3001 ttcagccttt cttggagtct gatccacgtg caacgcagct cgccatttct tacgtccgtt 3061 ataatggtga tagtgagacc ttcgtgccaa cagtgcgtcc gtctatgatc tcagaggcga 3121 cattgctcgt tgagcgtact ctctcgcacg aatacaacct tttcggttta tgtcgtggtg 3181 acatcattct ggggcagcac atgactccta ctgcgttcaa tcctccggct ccgcctccct 3241 ctgtcatttt taataggggt gatgctgacg tttatgagtt tggctcacgt agcttcgcca 3301 acttcggtat gaatggggag gagatcttgg tcatggatgc gaacggcgtg cgtcgtccat 3361 tacttggccg ttgggttatg ccactgcagc ttctgatggt gaatattggc gtctttccca 3421 agttgttgtt ggatcgtatc ttgaagggac gcttatacat ccgacttgaa gttggcgcgt 3481 atccctacac tgtgcagtat taccagggac gtgagttcac agatggtttc actctgcttg 3541 agcaatggat gtctaaggtg tcacccatgg gtatccctcc cgtccctttc ctcatgccac 3601 agtccgaagg acacaacatc acttcaggca tggttactca ttacatctgg tccactgaat 3661 acaatgacgg gtcactcttc gccacgaaca ctgacctgcc ggttactgtg tttggtcctg 3721 accgtaccat cccaatcgaa cgctaccggg cactcgttga tccaggcgct cttcctgcta 3781 ccaaccaact gccgcacacc atcgaccttt actgctcact gagacggtat tatctggaaa 3841 cacctcctat caccgctact gttaccactt atggcgatgg actccccgcg ctgaaccatt 3901 agagcggcga ggctagacgc gagttgatcg cgtcgactct cgttggagat tattcatc //