LOCUS AY641743 3958 bp mRNA linear VRL 01-JUL-2005 DEFINITION Avian orthoreovirus strain OS161 core protein lambda A mRNA, complete cds. ACCESSION AY641743 VERSION AY641743.1 KEYWORDS . SOURCE Avian orthoreovirus strain OS161 ORGANISM Avian orthoreovirus strain OS161 Viruses; dsRNA viruses; Reoviridae; Spinareovirinae; Orthoreovirus. REFERENCE 1 (sites) AUTHORS Song,C.H., Su,Y.P. and Lee,L.H. TITLE Avian orthoreovirus strain OS161 core protein lambda A (L1) mRNA JOURNAL Unpublished REFERENCE 2 (bases 1 to 3958) AUTHORS Song,C.H., Su,Y.P. and Lee,L.H. TITLE Direct Submission JOURNAL Submitted (30-MAY-2004) Department of Veterinary Medicine, College of Veterinary Medicine, National Chung Hsing University, 250 KuoKuang Road, Taichung, Taiwan 402, Republic of China FEATURES Location/Qualifiers source 1..3958 /mol_type="mRNA" /db_xref="taxon:253450" /organism="Avian orthoreovirus strain OS161" CDS 21..3902 /codon_start=1 /protein_id="AAV52827.1" /translation="MSSRKVARRRHKDATESKDTKDADKLKSSSNDVRESAKDATDKK VIIPKSDNPAASTPSSTDGASQTSVAKQTNDNDASVKESSPKPTVSSDGKDGMHGAVK SQDAKATVAVDNNKDRDVVFGGAGSGDKNAITKTGSVDNDGGVKVVPAKDATISSAKA MMEQKQLVAGLPKQPKSANHLCTVCMAQFASADALTIHQTTHSIGSNAALTSFSISTA VEEFIQSWAAATSTANTKTALTVSDVDSLMMTEGIRLITWDSGLCTSFELVPIVHSNT VQDVISYSWFTSSYNITTPFPQATVVRIVLRTNWAAKLDSPSSSRECDLRLAPPTESN ARSFSMLLNTGATPEGTFNPNTLRMNVLQMCLQYVLANLHLNRSTQFTMDLTAAAPNL SASQLRIVPEDKEGKWFPVMYPSRVNIPLFNKTADFVNQCIRDRIGRYDRAQTFAGAP SEWADMWETADALTLSVREMWMSRISQMNISPADIADAISRCSQSLLTVAAPTAPSVA RLLPWRVSSDERQLLQLLMYLNVGTSADYVQPILSAFARTLSRVSPLRINPTLIANAM STIVESTTNTQSPAAAILSKLKPVASDFSDFRLACAAWLYNGCVQTYLSEDSYPSSGG SVTSIDTLVDMFVCLLALPLVTDPNAPCQAFMVVANAMVGYENLPMDDPNFTQQRLAA AFNNPTTWPQCFLHPQNIDRRQCPILSWWAQQIHRNWPTPSQITYGAPDIIGSANLFT PPDVLLLPLQHRPIRITNPTLNFDNELTTWRNTVVDLVLRIIDSGRYQPNWNQSIRAS MRNAMTNFRIIKSYTPAYIAELLPVELAAIAPTLPFQPFQVPFARLDRDAIVTHVNVS RQAPNNLAQPALNMSMTYQRTGVPISLSARPLAVALLSGQYPTDPPLQTNVWYVNTLT PLYSNDGLFNNVQHAMVASEAYATLITMLAQCTDMQYPVDRPLNWLRQINLAANEATI FGRSINSLFQTAFDLSPSTVLLQPFLESDPRATQLAISYVRYNGDSETFVPTVRPSMI SEATLLVERTLSHEYNLFGLCRGDIILGQHMTPTAFNPLAPPPSVIFNRGDAEVHEFG PRSFANFGMNGEEILVMDANGVRRPLLGRWVMPLQLLMVNIGVFPKLLLDRILKGRLY IRLEVGAYPYTVQYYQGREFTDGFPLLEQWMSKVSPMGIPPVPFLMPQSEGHNITSGM VTHYIWSTEYNDGSLFATNTDLPVTVFGPDRSIPIERYRALVDPGALPATNQLPHTID LYCSLRRYYLETPPITATVATYGDGLPALNH" /product="core protein lambda A" /note="L1" ORIGIN 1 gcttttctcc gaacgccgaa atgagttcgc gcaaagtggc tagacgtcgt cataaggatg 61 ctactgaatc taaggatacc aaggatgctg ataaactcaa atcatcttct aatgacgtca 121 gagagtccgc gaaagatgcc acggataaga aggtcatcat tccaaaatca gacaatccag 181 ccgcatctac tccctcctcg actgatggcg cttcacagac gtccgtcgcc aaacagacga 241 atgataatga tgcttcagtc aaggaatcgt ctcctaaacc taccgtgtct agtgatggga 301 aggacggtat gcatggtgct gtgaaatcac aagatgctaa ggctactgtc gctgtagata 361 ataataagga tagagatgta gtgtttggag gtgcgggttc tggtgacaag aacgccatca 421 cgaagactgg atccgttgac aatgatgggg gtgttaaggt tgtaccggcc aaggatgcta 481 cgatatcttc ggccaaagcc atgatggagc aaaagcagtt agtcgctggt cttccgaaac 541 aaccgaagtc tgctaatcat ctgtgtaccg tctgcatggc tcagtttgcg tcagctgacg 601 ctcttactat tcaccaaact acgcattcta ttggttccaa cgcggctctg acgagttttt 661 cgatctctac tgctgttgaa gaattcattc aatcatgggc tgctgccaca tccacggcta 721 acaccaagac ggctttgact gtgtctgacg ttgactcact gatgatgact gaaggaatac 781 gccttataac ttgggattct gggttatgca cgtcttttga gcttgtcccg atcgtccatt 841 caaacactgt tcaagatgtt atttcatatt catggtttac gtcaagctat aacatcacga 901 ctcccttccc acaagcgact gtcgtgcgga ttgtcttgcg tactaactgg gctgccaaat 961 tggattctcc ctcttcgtcg cgtgaatgtg atcttcgtct tgctccacct acagagagca 1021 atgctcgatc attctcaatg ctactcaata cgggtgcgac tccagaaggc actttcaacc 1081 ccaacaccct tcgtatgaac gtgctgcaga tgtgtcttca gtatgttcta gctaacttgc 1141 acctgaaccg tagcactcag tttaccatgg atttgactgc cgcggctccc aatctttctg 1201 cttcccaact ccgtatcgtt cctgaggata aagaaggcaa atggtttcct gtcatgtatc 1261 cctctcgagt gaacatccca ctattcaata agacggctga ttttgttaat cagtgtattc 1321 gcgataggat tggtcgatac gatcgtgctc aaacttttgc cggtgcgcct tctgaatggg 1381 ctgacatgtg ggagacagca gatgctctga ctctctctgt tcgtgagatg tggatgtcac 1441 gtatctctca aatgaatatt tctcctgctg atattgccga cgctatctcc agatgttctc 1501 agtccttgct aactgtcgct gcgcctacag ctccttctgt agctcgttta ctaccatggc 1561 gagtcagttc tgacgaaaga cagcttcttc agttgttgat gtatttgaat gttggtacta 1621 gtgccgacta cgttcaaccc atcttgtctg cgttcgcccg tactctatct cgtgtgtctc 1681 cgctacgcat taatcctacc ctgatcgcta acgctatgtc aacgattgtc gagagcacta 1741 ccaatactca gagccctgcg gccgctatcc tgtcgaaact taaacctgtt gcttctgact 1801 tttccgactt caggctggcg tgcgctgctt ggctatataa tggttgtgtc cagacgtatc 1861 tttctgaaga ttcatatccg agcagtggtg ggtccgttac cagcatcgat acattagtcg 1921 atatgtttgt gtgcttgtta gcgttgccgt tagttactga tcccaatgct ccatgtcaag 1981 cctttatggt tgtcgccaac gctatggttg gttatgagaa cttacctatg gacgatccta 2041 atttcactca gcagagattg gctgcagcgt tcaacaatcc taccacctgg ccccagtgtt 2101 tcctccaccc tcaaaacatc gaccgacgtc agtgtccgat cctctcatgg tgggctcagc 2161 aaattcaccg taattggcct acaccgtctc aaatcacgta cggcgcgcct gacatcattg 2221 gatcagctaa tttatttact ccccccgacg tgctgctgct ccctttacag cataggccca 2281 tacgtatcac caatcccacc ctgaacttcg ataatgaatt gacgacctgg cgtaatactg 2341 tggttgattt ggttctgcgc attatcgata gtggtcgata ccagcccaat tggaatcagt 2401 cgattcgtgc atccatgcgt aatgctatga cgaatttcag gatcattaag tcctacactc 2461 ctgcttacat agccgaacta ctgcctgtgg aattagcagc cattgcccca actctacctt 2521 ttcaaccttt ccaggtgccg tttgctcgct tggatcgtga cgccattgtc actcacgtca 2581 acgtgtctag acaggctccc aacaatctcg ctcaaccagc gctgaacatg tccatgacgt 2641 atcagcgtac aggcgtcccg atttcactta gcgctcgtcc tctagctgtc gctcttctgt 2701 caggtcagta ccccactgat cctcctcttc agaccaatgt ttggtacgtg aatactctca 2761 cgcctctgta ttctaatgat ggtcttttca acaacgtgca gcacgctatg gttgcctctg 2821 aagcctatgc tactttaatc acgatgctgg cacagtgcac tgatatgcag taccctgtgg 2881 atcggccctt gaactggctt cgtcagatta acctagctgc taatgaagcg acgatatttg 2941 gacgctctat taattcactc ttccaaactg ctttcgacct ctcgccctct actgtgttgc 3001 tccagccctt cctggaatcc gatccgcgcg cgacgcaact tgccatctct tatgtgcgtt 3061 ataatggtga cagtgaaacg ttcgtgccaa cagtgcgtcc atcgatgatt tcagaggcga 3121 cgttgctcgt cgagcgtact ctctcgcacg aatacaatct tttcggttta tgccgtggcg 3181 acatcattct ggggcagcat atgaccccca ctgcgttcaa tccgctagct ccacctcctt 3241 ccgttatttt taataggggt gacgctgaag ttcatgagtt cggtccccgt agttttgcca 3301 acttcggtat gaatggagaa gaaatcttag ttatggacgc aaatggcgtg cgccgtcctt 3361 tacttggccg ttgggttatg ccgttgcaac ttttgatggt gaacatcggc gtctttccca 3421 agttactgtt ggatcgtatt ctgaaagggc gtttgtacat ccgcctcgaa gttggcgctt 3481 atccctatac tgtacagtac taccaaggac gcgagttcac ggatggtttt ccactgcttg 3541 agcaatggat gtctaaagtg tcgcccatgg gcattccccc tgttccattt ctcatgccac 3601 aatctgaagg acacaacatc acttccggta tggttactca ctacatttgg tccactgaat 3661 acaacgatgg gtcactcttc gccactaaca ctgatctacc agttactgta tttggccccg 3721 accgctccat cccaattgag cgttatcgtg cactcgtcga tccaggcgct cttcctgcta 3781 ctaaccaact cccacacacc attgacctct actgttcact gagacgttac tacttagaga 3841 cccctcctat caccgccact gttgccactt atggcgatgg actccccgcg ctgaaccatt 3901 agagcggcga ggctagacgc gagctgatcg cgtcgactct cgttggagat tattcatc //