LOCUS NC_026806 2112 bp DNA linear VRL 24-NOV-2015 DEFINITION Badger feces-associated gemycircularvirus strain 588t, complete genome. ACCESSION NC_026806 VERSION NC_026806.1 DBSOURCE BioProject accession PRJNA281125 KEYWORDS RefSeq. SOURCE Badger associated gemykibivirus 1 ORGANISM Badger associated gemykibivirus 1 Viruses; Genomoviridae; Gemykibivirus. REFERENCE 1 (bases 1 to 2112) AUTHORS Conceicao-Neto,N., Zeller,M., Heylen,E., Lefrere,H., Mesquita,J.R. and Matthijnssens,J. TITLE Fecal virome analysis of three carnivores reveals a novel nodavirus and multiple gemycircularviruses JOURNAL Virol. J. 12, 79 (2015) PUBMED 25986582 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 2112) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (16-APR-2015) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 2112) AUTHORS Conceicao-Neto,N., Zeller,M., Heylen,E., Lefrere,H., Van Ranst,M., Mesquita,J.R. and Matthijnssens,J. TITLE Direct Submission JOURNAL Submitted (12-DEC-2014) Microbiology and Immunology, Laboratory for Clinical and Epidemiological Virology, Rega Institute for Medical Research, KU Leuven - University of Leuven, Minderbroedersstraat 10, Leuven 3000, Belgium COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to KP263543. ##Assembly-Data-START## Assembly Method :: SPAdes v. 3.1.1 Sequencing Technology :: Illumina ##Assembly-Data-END## COMPLETENESS: full length. FEATURES Location/Qualifiers source 1..2112 /mol_type="genomic DNA" /country="Portugal" /collection_date="2011" /host="Meles meles" /db_xref="taxon:1634484" /strain="588t" /organism="Badger associated gemykibivirus 1" gene 102..1010 /locus_tag="XF38_gp1" /db_xref="GeneID:24092836" CDS 102..1010 /locus_tag="XF38_gp1" /db_xref="GeneID:24092836" /codon_start=1 /protein_id="YP_009130621.1" /translation="MALRYKSRSNYRRIPRSRAKYRARKRSAPRRRTYRKRQMSVRRI RNITSRKCQDNMMPITISDDGVTEGTPGVGVTMVGDFVYTFCFVPSGRMPGPQYGASE RRRARTFARGYKETGLLETQTDAQWIWRRIVFRMRLGKWIGGFDTLLDPTQTLILDHT TNGMMRTLWNLGNTTDLNAIDRNDALDKILFKGTQGQDWADKFTAPVDPTSVYLIRDK TRYIGGSMAASGRFHRVRDWYPVNRTLVYEDTEHGQPPDTATPWSDESRTTCGDVVVL DMFRCASGDVTDTMSFSPEGCYYWHE" /product="capsid" gene complement(995..2083) /locus_tag="XF38_gp2" /db_xref="GeneID:24092835" CDS complement(join(995..1364,1464..2083)) /locus_tag="XF38_gp2" /db_xref="GeneID:24092835" /codon_start=1 /protein_id="YP_009130622.1" /translation="MPAFYVNSRYVLLTYAQSGSLDPFDVVDHLASIHGECIVGREHH RDGGVHLHAFVHFGRKFRSTSATVFDVAGFHPNISPSFGNPGRGFDYAIKDGDICAGG LERPGDAGAPPTKDVWSQIVMAKDRDEFWSLLRQHQPRALATSFVSLQKYADWHFRVD PEPYQHDPSLGFYLDDYPELGSWVDGYLRTNNTGMCAQSALSGLSGVGMSLVIYGPSR VGKTVWARSLGNHAYFGGLYSLDEGVENVDYAVFDDIQGGLEFFHAYKFWLGHQSQFY ATDKYKSKKLIHWGRPAIWLANTDPRLEKGADSDWLEANCIFVCVTTPLYSCQ" /product="rep" ORIGIN 1 taatactata gccatctggg acacagagca cagtcgacgt gtccctataa ataggcagtc 61 ttctgcctag tttcctcctc ttttgttgag taaacaacaa catggcattg cggtacaaat 121 ctcggtcaaa ttaccggcgg atacctcggt ctcgtgccaa gtatcgcgcc cggaaacggt 181 cagcccctcg taggcgaacc tatcggaagc gacaaatgtc cgttcgccgc atacgcaaca 241 ttacatcgcg aaaatgccaa gacaatatga tgccgatcac aatctccgac gacggagtaa 301 ccgagggaac accaggagtt ggtgtcacaa tggttgggga ctttgtttac actttctgtt 361 tcgtcccgtc cggaaggatg cctggccccc agtacggagc gagcgagcgt cgccgtgccc 421 gaacgttcgc ccggggttac aaagagaccg gtcttctcga gacccagacc gatgctcaat 481 ggatatggag acgcatcgta tttcgcatga gacttgggaa gtggatcggc gggttcgata 541 ctctcctcga cccaactcag acactcatat tggaccacac gaccaacggc atgatgagga 601 ccctctggaa cctcggcaat acgacggacc tcaacgctat tgatcggaac gacgctctcg 661 acaagatcct gttcaagggt acacaaggac aagattgggc cgacaagttc accgcccctg 721 tcgatcctac gtcagtgtac ttaatcaggg acaagactag gtacattggt ggttccatgg 781 cagctagtgg taggttccac cgcgtacgcg actggtaccc tgtcaaccgc acacttgtgt 841 acgaagacac cgagcacgga cagccccccg acacagctac cccctggtcc gatgagtcac 901 gcaccacttg tggtgatgtg gtggtactgg acatgtttag atgtgccagt ggagatgtga 961 cagatacaat gtcgttcagc ccagaggggt gttattattg gcatgaatag agtggtgtgg 1021 taacacatac gaaaatacaa tttgcctcca accaatcaga gtccgccccc ttttccagtc 1081 gtgggtccgt gttagccaac caaattgcgg gccgccccca atggatcaac ttctttgatt 1141 tgtacttgtc agttgcatag aactgtgact ggtgacccaa ccagaacttg tatgcgtgaa 1201 agaattcgag acccccctga atatcgtcga aaacggcata gtcgacgttc tccaccccct 1261 cgtccaatga atacaatcca ccaaaatagg cgtggttccc tagggaacgc gcccacaccg 1321 tcttgcctac tctgctaggc ccgtagataa caagggacat tcccctgcct gcatatgtta 1381 gcgacactgg caattacacc gcgaaagggc ggccggtagg ccgaccaatt aacttctggc 1441 gtaagccgct ttctttccta atcacgcctg agaggcccga cagggccgat tgggcgcaca 1501 tacctgtatt gtttgttcgc aagtagccat caacccaact accgagttcc gggtagtcgt 1561 caaggtagaa tcccaaactt gggtcatgtt gatatggttc tgggtccaca cgaaagtgcc 1621 agtcggcata tttttgaagg gaaacgaagc tggttgcgag agcccgtggt tgatgctgtc 1681 gaagaagcga ccaaaactcg tccctatcct tcgccatgac aatctgagac catacatcct 1741 tcgtcggtgg agctccagcg tctccaggtc tctcgagtcc accggcacaa atgtctccat 1801 ctttaatcgc gtagtcaaat ccgcgtccag ggtttccgaa actaggcgag atattagggt 1861 ggaaacccgc aacatcaaag acagttgcag atgtcgatct gaacttcctg ccaaagtgga 1921 caaaagcatg gagatggact cctccatctc ggtggtgttc tcttccgaca atgcactcgc 1981 catggatcga ggccaagtgg tcgacaacgt caaaagggtc gaggctgccg ctctgagcgt 2041 aggtgaggag gacatagcgt gaattgacat aaaacgcggg cattgtaggg tgtcctgtcc 2101 agatggcgaa tt //