LOCUS NC_007003 7801 bp DNA circular VRL 02-JUL-2007 DEFINITION Banana streak virus strain Acuminata Vietnam, complete genome. ACCESSION NC_007003 VERSION NC_007003.1 DBSOURCE BioProject accession PRJNA15240 KEYWORDS RefSeq. SOURCE Banana streak VN virus ORGANISM Banana streak VN virus Viruses; Retro-transcribing viruses; Caulimoviridae; Badnavirus. REFERENCE 1 (bases 1 to 7801) AUTHORS Lheureux,F., Laboureau,N., Muller,E., Lockhart,B.E. and Iskra-Caruana,M.L. TITLE Molecular characterization of banana streak acuminata Vietnam virus isolated from Musa acuminata siamea (banana cultivar) JOURNAL Arch. Virol. 152 (7), 1409-1416 (2007) PUBMED 17431738 REFERENCE 2 (bases 1 to 7801) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (16-MAY-2005) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 7801) AUTHORS Lheureux,F., Laboureau,N., Lockhart,B.E.L. and Iskra-Caruana,M.-L. TITLE Direct Submission JOURNAL Submitted (13-SEP-2004) AMIS-UMR BGPI, CIRAD, TA 41/K Campus International de Baillarguet, Montpellier 34398, France COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AY750155. COMPLETENESS: full length. FEATURES Location/Qualifiers source 1..7801 /mol_type="genomic DNA" /db_xref="taxon:1411991" /strain="Acuminata Vietnam" /organism="Banana streak VN virus" /host="plantain" /note="BSV-AcVnm" gene 754..1191 /locus_tag="BSVSAV_gp1" /db_xref="GeneID:5141816" CDS 754..1191 /locus_tag="BSVSAV_gp1" /db_xref="GeneID:5141816" /codon_start=1 /protein_id="YP_233108.1" /translation="MDSYWDLEFEKYKNSHSKSVSDLSYLDLASADKVSNKDLAFNLH INTYRSDLGFKVAIHSLSKNRELLIQNRKLLEEQKQQLSEINNLSKVVRLQRADLKET LRRQDVLAKELQALRKDYLERRPLSKEDVEELVVRISEQPKIY" /product="hypothetical protein" /note="ORFI" gene 1283..1681 /locus_tag="BSVSAV_gp2" /db_xref="GeneID:5141817" CDS 1283..1681 /locus_tag="BSVSAV_gp2" /db_xref="GeneID:5141817" /codon_start=1 /protein_id="YP_233109.1" /translation="MSLAGSKATAIYQEALQSTAAGWEDTGIGFTDKGVISTTTLSRQ LNSLLFLVIKQNQQITTISEELTQLHNRVKNLEGRTGVSASPLYKSEIESINAKLKSI QDIQGSHPPKETPSGVIKVFEDPYSILRRL" /product="hypothetical protein" /note="ORFII" gene 1682..7378 /locus_tag="BSVSAV_gp3" /db_xref="GeneID:5141818" CDS 1682..7378 /locus_tag="BSVSAV_gp3" /db_xref="GeneID:5141818" /codon_start=1 /protein_id="YP_233110.1" /translation="MASRPRVSGSTTRTMIAEPGVPLVDDQIREYRSAARVAYEAQRI ARRTGNILGRIVGRQPREHTLAMVVDPNSELERSLAHRARTIPAEVLYMTQRGEPTNR VYRNRTEERMLVTHGQQDRTFILPESYEELREAGFEYIHLGVLQVRIQIMHRTYDGTM ALVVFRDTRWTQENHQDRSIIATMEADLSQGHQLIYVIPDIMMTIRDFYQHIQISILT KGYEGFQGEANLLITRSCRCRLSNVPNVGFQYNIQNVVEFLKSRGVKALNATKLSTRR FQGGEWNIRPSEVVVPMQPTTMIVRVNYDSSRSIRFGDYEASTSSSAPRYEQDGDEDE ALGDIHQVNMITIIEDDAEDDYPRLSALERIIAPESMVGEEDTIAEFLSNLSLDSSTD EEFYDADNSLFEEEEYDGDSEVSTPRSKYNIFALEDEYPKLQQLESLVLSTTESAISR FRPADTDMTGVGPGYAPATGTAGYTGASSSDFPYPRRPRKWDNNSEWFNLPTANARQA SIFVMPQDFDTKVFERWESSVLLHMSDKVFDDPQDKLTYVENLLGESEKKMFITWRMM FTAEYEEMKNNALGSNGTQNILNQIRMIFFLENPQVGTTNTQDAAYKTLKQLVCTEMS GPAIYRYLNDYFHLAAKSGRAWASDELSKEFFTKLPRGLGDRVEKKFKEKYPNNTIGV APRITFTRNYIKEICQEAVFQSQLKRLDFCKGTPVHGLYGKEKAYGRKYGVRKSTSYK GKPHKSHVRIDKKKHLLMKRKDCKCFACGDIGHFASECPNPKKLMHRVQILQSLELDD GIDVISVGFDESDVSDIYSVSEGEDSYQFNNEDFDVIGHDVFMFTIEEQRNCLVETTS AWRSAMKVTPEEKNCLHTWSFEEKTTDHCRACKNLALRGSRADCTQCKIIICSLCKPY YFQDGSPIPAQSSTPSGYSYDDWMGSANRWKAHYEFSQARRKSLKADLERAEEELKFY KQKEKEKAKLKDQIPEAVQAKLDDLEKEKELNNILRIEAETELKALKESFKEKEEALK EEITALEEEVRIHKEEAEELQEENQKLKEKIIAFEKDVTQGPEEVIELVNNVEEHLVL TGQQKNNLLNIKITLEVKEKRITMNAILDTGAAICVCDGQMVNEYFRRPSMMNAFIKG VNGITNVKEILEEGKIWIGNQWFRIPRTYIMPQLSEGLHFIIGMNFIRAMEGGIRIEQ GTVTFYKMVTQAQAPPMVHDISYLEELELELPIYYDICATNPSGGEINSDLISPSEIR KLKDLGYIGEEPLKHWAKNQVKCRIEIKNPDLIIEDRPLKHVTPAMKESMKKHVDKLL ELKVIRPSTSKHRTTAIIVQSGTEIDPLTGKEKRGKERLVFNYKRLNDNTEKDQYSLP GINTIISRIGKSKIYSKFDLKSGFHQVAMDPESIPWTAFWAIDGLYEWLVMPFGLKNA PAIFQRKMDNCFRGTEEFIAVYIDDILIFSDNISDHRKHLSKFLEICKANGLVLSPTK MKIGAKEIDFLGATIGNSKIKLQPHIIKKIIETKDEELKETKGLRKWLGVLNYARAYI PNLGKTLGPLYSKTSINGEKKMNSQDWKVVQLIKNQVQNLPDLDIPPAEATMVLETDG CMEGWGGVCKWKLHPSDTRLAEKVCAYASGRYHPIKSTIDAEVHAVINSLEKFKIYYL DKKELIIRTDSQAIVAFYKKQADHKPSRTRWLMLIDYITGLGINVKFEHIDGKENVLA DTLSRLVQVLITKVHHPAETQLVEAVMEVISNPKKEALDKVNHFIFLTQQWIAERKEE HTVNTLLQLEEPQLHCGCRNYETGERRNAILLQSHTSANPNRWFYKCAENKCHIWIWK DILDQYAEDYATYTRIGLEALNLEDWFEEPEPDPPNPVDRQRIEDILDLLNVSNDD" /product="putative polyprotein" /note="ORFIII; cleavage products predicted to include viral movement protein, coat protein, aspartic protease, reverse transcriptase and RNAse" ORIGIN 1 tggtatcaga gcaaggtttt ctgtaagtaa tttatggctt tcatggggta aaacccttag 61 ataggagcct gagggctctg ctatgttcta ttttgagaaa ataactgtgt aagtagtaat 121 gcatgataaa tcgaataagt tctttacgga tggtcctaaa tttatgaaat cattctttta 181 ctatctgagt gagacccttg tgtttccaag ttctactgag aaatcatgag taaatggacg 241 ttgacacact gacttaagga aaagaaagat gtgcctagga tgaagtcgag cactgttcta 301 ggctgaaggg tgaaaagaaa aatgagttga gttgggagta agactctgag aggcttgagg 361 caaaagaacc ggaaccttac ctagcaaagt aagacccaag ggagggcagt agctggagaa 421 ccccggtgtg agtttcttta cctagcagaa gatatactct agtatcctca aaacaccgtg 481 aagtatttac aaccctttat gaacaagtat tttctggagt tagatgtcag ccaccaaaga 541 tcatgatcta tcacaaacaa acttgagtca tacagagaag aactcagatg taactgaatg 601 actaatgatc agggacctct attaaagagc ttagtaagaa gtaagtgcat aaactacctc 661 tggaactggt tataatcttg aaatgagcat atgtatccca aaggttactc ctatctgtcc 721 gtgaccataa gaaaccttct ttaaagaaaa actctggatt cctactggga tcttgaattt 781 gaaaagtaca aaaactctca ttccaaatct gtttcagatc tttcttattt agacttagca 841 tctgctgata aggtctctaa taaagacctt gcatttaatt tacatataaa cacttatcgt 901 agtgatcttg gttttaaagt cgcaattcac tctttatcaa aaaatcgtga gctgctaata 961 cagaacagga agcttttgga agaacaaaag cagcagctgt ctgaaattaa caacctatct 1021 aaggttgtgc gtctccaacg agctgattta aaggagacct tgagaagaca ggacgtcctt 1081 gcgaaggagc ttcaggctct tcgtaaagac tatctggaaa ggcgccctct tagcaaggag 1141 gacgtggaag aattggttgt ccgcatctct gaacaaccaa aaatttattg aaaaaacaga 1201 cggaagctct tactgaggag cttacaaagg aggttcaggc actgaagcta atcatccata 1261 acttcgaaca gaagttactg ggatgagcct ggccggaagc aaggccacag caatctatca 1321 agaagccttg caatctactg ctgctggttg ggaagacacc ggcatcggat ttactgataa 1381 aggagttatc agtaccacta ccctatcaag gcagctaaat tcgctgttat ttctggtgat 1441 caaacaaaat cagcagatca ccaccatctc ggaagaacta acccaacttc acaaccgggt 1501 taaaaacctt gaaggaagga caggggtatc tgcaagcccc ctgtataaat cggagattga 1561 atccatcaac gccaagctca aaagtattca agatatacaa gggagtcacc ctccaaaaga 1621 gaccccctcc ggagttatca aagtttttga ggatccctac agcatcctcc gcagactata 1681 aatggcgtca agacctagag tttctgggag cactaccaga accatgatag cagaaccagg 1741 ggttcccctg gtggatgatc agatccggga ataccggagt gcggcccgag tcgcatacga 1801 agcacaaagg attgccagac gcactggcaa tattcttgga agaattgttg gacgacaacc 1861 aagggagcat acccttgcga tggtcgtgga ccccaacagt gagctggaac gctcactggc 1921 tcaccgggca cgaacaatac ctgctgaagt cctttacatg acccagcgcg gtgagcctac 1981 aaatcgggtc tatcggaaca gaactgaaga aaggatgcta gtgactcatg gtcagcaaga 2041 taggactttc atcttgccag agtcatatga agagctcagg gaggctggat ttgagtacat 2101 ccatctaggg gtactccagg tgcgcatcca aattatgcac cgaacatatg atggtacaat 2161 ggcattagtg gtcttccgtg acaccagatg gacacaggag aaccaccaag acagatccat 2221 tatagcaacc atggaggctg atctctccca agggcatcag ctaatttacg tcatcccaga 2281 tataatgatg actattcggg atttctacca gcacattcag ataagcatcc ttaccaaagg 2341 atatgaaggc tttcaaggag aagcaaatct ccttattaca agaagctgcc ggtgcagatt 2401 aagcaacgtt cctaacgttg gcttccaata caacatccag aacgtcgtgg aattcttaaa 2461 atctagggga gtaaaagccc taaatgcgac gaaattaagc accaggaggt tccaaggagg 2521 agaatggaac atccgaccat cagaagtggt ggtccctatg cagccaacaa ctatgatagt 2581 acgagttaat tatgactcgt cacgaagcat cagattcggg gattatgaag ctagcacatc 2641 atcatcagcc ccgagatatg agcaagacgg tgatgaagat gaagcacttg gtgatatcca 2701 tcaagtaaat atgatcacca tcatagaaga tgatgcagaa gatgactacc cacggttatc 2761 agctttagag cgaataatcg ctccagaaag catggtggga gaggaggaca caattgctga 2821 atttttaagc aatctgtcct tagattcctc cactgatgag gaattctacg acgccgacaa 2881 ctcattattc gaagaagaag aatatgatgg ggattccgaa gttagcaccc caaggagcaa 2941 atacaatata tttgcgctag aagatgagta cccaaaactt caacagctgg aaagcctggt 3001 actctccaca acagagtctg ctatcagtcg ctttagacca gcagacacag atatgactgg 3061 cgtaggccct ggctacgcac cagcaactgg aacagctggc tatactggag ccagttcatc 3121 tgatttccct taccctagaa gaccaagaaa gtgggacaac aactcggagt ggttcaacct 3181 acccaccgct aacgcgaggc aagcatcaat attcgttatg cctcaggatt ttgacacaaa 3241 ggtctttgaa agatgggaaa gttctgttct ccttcacatg tctgacaagg tttttgatga 3301 tccacaagac aagttaactt atgtggaaaa cctactagga gaatcagaaa agaagatgtt 3361 tatcacttgg aggatgatgt tcacagctga gtacgaagaa atgaagaaca acgctctcgg 3421 ctcaaatgga actcaaaata tcctgaacca gatcaggatg atattctttc tggaaaatcc 3481 ccaagttgga accaccaaca ctcaagacgc agcatacaag acactcaaac aactagtctg 3541 cacagagatg tctggacctg cgatctacag gtacctaaat gattacttcc atttagcggc 3601 aaaatctgga agagcgtggg catctgatga gctgtccaag gaattcttta caaaactgcc 3661 aaggggatta ggggacagag ttgaaaagaa attcaaagaa aagtacccca acaacactat 3721 tggagtagcc cccagaatca ccttcacaag aaattatata aaggaaatat gccaagaggc 3781 tgtattccaa agccaactga aaaggctaga tttttgcaaa gggacacccg tccacggctt 3841 atatggtaaa gagaaggcat atgggaggaa atacggagtc aggaaaagca cttcgtacaa 3901 aggaaagcct cacaagtcac atgtgaggat agataaaaag aagcacctcc tgatgaaacg 3961 aaaagactgc aagtgttttg cttgcggaga tatcggtcac ttcgcatcag agtgtccgaa 4021 tcccaagaag ctgatgcacc gagttcaaat tctacaatcc ttagagcttg atgacggaat 4081 cgacgtaatc tccgtaggat ttgatgagtc agatgtctca gacatctatt cggtatctga 4141 aggcgaggac agctaccagt tcaataatga ggattttgac gttataggac atgacgtgtt 4201 catgttcacc attgaagaac aaagaaactg cctggtagaa accacgtcag cctggagaag 4261 tgcaatgaaa gttactccag aagaaaagaa ttgcttacac acatggagct ttgaggaaaa 4321 gacaacagac cactgcagag cctgcaaaaa tctggcccta cgagggagca gagctgactg 4381 cactcagtgt aagataatca tttgctcttt atgcaaacca tactatttcc aggatggttc 4441 acctatccca gcacaaagtt caaccccatc aggatactcc tacgatgatt ggatgggatc 4501 agcaaatagg tggaaggcac actatgagtt ctctcaggca agaaggaaga gcctgaaggc 4561 agaccttgaa agagcggaag aagaactaaa attttataag caaaaggaaa aggaaaaggc 4621 caaattaaag gatcaaattc cagaagcagt acaagcaaaa ctggatgatc tggaaaaaga 4681 aaaagagctc aataacatcc taagaataga ggctgagaca gagctaaaag cattaaagga 4741 aagcttcaaa gaaaaggaag aagccctgaa ggaagaaatc acagctctag aagaagaagt 4801 gaggatacac aaagaggagg ctgaagaact tcaggaagaa aatcaaaaac tcaaagagaa 4861 gatcatagcc ttcgaaaaag acgtaacaca aggaccagaa gaagtgatcg aattggtcaa 4921 taacgtggag gagcacctgg tactaacagg acaacagaag aacaatctcc tcaacatcaa 4981 gataactctg gaagttaagg aaaaaaggat taccatgaac gcgatactag acactggagc 5041 cgcaatctgt gtctgtgatg ggcaaatggt aaacgaatat ttcaggagac catcaatgat 5101 gaatgcgttc ataaagggag ttaatgggat taccaatgtc aaagaaatct tagaggaagg 5161 aaaaatctgg attggtaatc aatggttcag aatcccaagg acatacatca tgccccagct 5221 atcagaaggc cttcatttca tcatcggaat gaactttatc agggcaatgg aaggagggat 5281 tcgaattgag caaggaacgg taaccttcta caaaatggtt acacaagcac aggcaccccc 5341 tatggtacac gatatttctt accttgaaga attagaatta gaactgccga tttactatga 5401 tatctgtgca actaacccct caggaggaga aatcaatagt gacctaatat ccccctcgga 5461 gatccggaaa ctaaaggact taggctacat tggggaagag cccttgaaac attgggctaa 5521 gaatcaagtc aagtgccgaa ttgaaatcaa gaaccctgac ttaatcattg aagataggcc 5581 cttgaagcac gtcaccccag caatgaaaga atccatgaag aaacatgtgg acaagctgct 5641 ggaacttaag gtaatcaggc catccacaag caaacaccgg acgactgcga taattgttca 5701 atccggtaca gaaattgacc ccctcactgg aaaagagaaa agagggaaag agaggcttgt 5761 attcaactac aaacgcctca acgacaatac cgaaaaagac cagtattcac tacctggcat 5821 caatacaatt atcagcagga tcggcaagtc aaaaatttac agcaaatttg acttaaaatc 5881 cggattccac caggtagcca tggatccaga aagcatccca tggacggcct tttgggccat 5941 agatggactt tatgaatggc tagttatgcc atttggtctg aagaatgcgc ccgctatatt 6001 tcagagaaag atggacaact gcttccgagg aacggaggaa ttcatagcgg tatatattga 6061 tgatatttta atattctctg acaatatctc tgatcacagg aaacatctgt caaaattcct 6121 ggagatctgc aaggcgaatg ggctggtatt aagcccaaca aaaatgaaga taggcgcaaa 6181 ggaaattgat ttcctaggag caactattgg aaactccaag atcaagcttc aacctcatat 6241 aatcaagaag atcatcgaga caaaggacga ggagctaaag gaaacaaagg ggctcagaaa 6301 atggttggga gtccttaact atgcacgggc atacattcca aatttaggaa aaacattagg 6361 cccgctctac tccaagacgt caattaatgg agagaagaag atgaacagcc aagattggaa 6421 ggttgttcaa ctgatcaaaa atcaggtaca aaatttacct gaccttgaca taccccctgc 6481 agaggcaact atggtcttag agactgacgg gtgtatggaa ggatggggag gagtatgcaa 6541 atggaagctc catccctctg acacaagact ggcagaaaag gtctgtgcgt acgcaagtgg 6601 aaggtatcac cccatcaaga gcacaattga tgcagaggta cacgcagtga tcaacagctt 6661 agaaaaattc aaaatttatt atctggataa aaaggagttg atcataagaa cagacagcca 6721 ggctattgtg gctttttata agaagcaagc tgatcataag ccctcaagaa caaggtggct 6781 tatgctaatt gactacatta ctgggctcgg aatcaacgtc aaattcgagc atattgacgg 6841 gaaagaaaat gttctagctg atactctatc aaggctggtc caagtgctga tcaccaaggt 6901 tcatcatcca gcagaaaccc agctagtcga agccgtcatg gaagttataa gcaatccaaa 6961 gaaagaagcc ttggacaagg taaaccattt tatcttccta acccaacagt ggattgcaga 7021 acgcaaggag gagcacacgg tgaacacgct actccagttg gaagaaccac agctgcattg 7081 tggttgtaga aactatgaaa caggggaaag aaggaacgcg attctcctac aaagtcacac 7141 ttcagccaac ccgaacagat ggttctataa gtgtgcagaa aacaagtgcc acatttggat 7201 ctggaaagac atcctggacc aatatgctga agattatgct acctacacca ggataggact 7261 tgaagcactt aaccttgaag attggttcga agaaccagaa cccgatccac ctaaccctgt 7321 ggaccgccag aggatagagg acatcctgga cctactgaac gtcagcaatg acgactgaaa 7381 gattcccagg acaccggcgg aagtggtgga cccagtctag gtgcgatgct tagtcgcgca 7441 cgatgactat gtcggaaggc atctttgctt tcggcaaact ttagtaatac tttaaggaaa 7501 gtattgtaca agttaggtgc agagacaata atgcacccag ctttagcttt gtttatggaa 7561 ttattgtgtc ggttgcatta ttggatgcct gcgtgcaccc taagcaatcc ccggccctct 7621 tctctataag aggagccctt gcaatcagtt gcaagcatgc aagtttccca ctgcaagctt 7681 acttctgagt ttgagttcaa gttcaataaa attcaagctt tcctcttaca ttctgttctt 7741 gaaaggttcg atctaatcga gcgagtagag aacaagatct tttgggattt ccgccgttcc 7801 a //