LOCUS AF536943 3520 bp RNA linear VRL 26-AUG-2003 DEFINITION Barley mild mosaic virus segment RNA2, complete sequence. ACCESSION AF536943 VERSION AF536943.1 KEYWORDS . SOURCE Barley mild mosaic virus ORGANISM Barley mild mosaic virus Viruses; ssRNA viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae; Bymovirus. REFERENCE 1 (bases 1 to 3520) AUTHORS Lee,K., Choi,M. and Lee,W. TITLE Nucleotide sequence of barley mild mosaic virus RNA 2 JOURNAL Unpublished REFERENCE 2 (bases 1 to 3520) AUTHORS Lee,K., Choi,M. and Lee,W. TITLE Direct Submission JOURNAL Submitted (09-AUG-2002) Department of Agricultural Biology, Bioresources Science College of Agriculture, Chonbuk National University, 664-14 1-ga, Deokjin-dong, Chonju, Chonbuk 561-756, Korea FEATURES Location/Qualifiers source 1..3520 /mol_type="genomic RNA" /db_xref="taxon:12466" /segment="RNA2" /organism="Barley mild mosaic virus" /host="barley cultivar baegdong" CDS 142..2826 /codon_start=1 /protein_id="AAQ10759.1" /translation="MMMNSTIRQGWQQVLKRFSIPASGDRLIISNPTDQPIGLFGAFD TSLQTLSQVGDDPEVLKQKIHIPMHLDIASALEASPRSFPWIFLTNSFCTFGGSIHAQ SLQTFATAEFKSGFCYMNLLIPLSFDIIDTHADSFRIFVEQLPDMLGAYPTLSMVLNV MLHAATRFPEIVSSPVPTIAFDAESLQFHVTGKRGVPGMWNILKAGRVYVLLSLAADG VGCEYMLYPVGAAPQYSFWKKSMDHFTSDRAVEFLAMQSLLASALEQDYTTHDALDAL LAALQNAGYTNVVARERRFPNGHDPSTVWLNLSEAPISEKLTDLKRYLLVGHRSDDTA DITHNVHQYVFEVLKTMSVQFSKTTNAYNRARFEVNHKIIWNAEYGRGPQQNAELEAL VLFLNRQSLEIENILHRTTSPVVVTDWQPDVPPAAPEVSQEEPTLATATPITEAPAHA TPVEVVNLPPARSYWAETLVGILTAILGTIFALLTRALIRAKKLRRKSTFPWVTLDSG DEDDDHSGGGGGSPQTPGGQPPASPAHGTHQSRLSVQDIASDTSLLSVDLDEDTLSQY DETFQRIRRALFETSFADILQNSARWISTLEAMALADGNAPYTLLAQYLNGIEETYTN FRNTGHVSRTTLSGFFALEDSLRAAGIAFGATTPTQTIHNQFAGSPARRWKTRFEQIA CELGDASIKSLADLANIIDTERERSDLTQFDVLAASSISSLCRAVRIISDTTDPDAQL ALVENATAMQNNINAILGTNVSIPFLSATRRLLITRRIQQAGAENRSGATPDTIQQLA DAELAKIVSEANMFNEMAASQRDIANATREATIREHVLSPVNALANVGMAAAFFRSGG MRSRALHPAMPTMPGVSAATGRPMFQAFRGRGHRLNRR" /product="polyprotein" ORIGIN 1 aaaaataaaa caaaactaca acccaataca aacaacaaac aacaatcaaa caaacaaaca 61 cacacctaac acacacaaca aaccacagtt cacagcttcg aaacgcggac tcacccaccg 121 cactctcaga attgaacata aatgatgatg aactccacga ttcgccaagg atggcagcaa 181 gtgctcaaac gcttttctat cccagcatcc ggagataggc tcatcatttc caatcccacc 241 gatcaaccca taggtctttt cggagcattc gacacatcat tgcaaacact ctcgcaggtt 301 ggcgatgatc ccgaggtttt gaagcagaaa atccacatcc ccatgcacct agacattgca 361 tccgcgctcg aagccagccc ccggtccttc ccatggattt tcctcacaaa ctccttctgc 421 acttttggtg gttccataca cgcccagagt ctccaaacct tcgcaactgc tgagttcaag 481 agcgggttct gttacatgaa cctgctgata ccgctcagtt ttgacatcat tgatacacac 541 gctgattcct ttcgcatctt tgttgaacag ctccccgaca tgctaggtgc ctacccaacg 601 ctcagcatgg tgctaaacgt catgttgcac gcagccacgc gcttcccgga aattgtgagc 661 tcccccgttc caaccatagc attcgatgcc gaatcactgc agttccacgt aactggtaaa 721 cggggcgttc ctggcatgtg gaacatactc aaagccggcc gcgtgtatgt gcttctttcg 781 ctcgcggcgg atggcgtagg ttgtgagtac atgctgtatc ccgttggcgc tgcaccccaa 841 tactccttct ggaagaaatc tatggaccac ttcacatccg accgggccgt tgaatttcta 901 gccatgcaga gcttacttgc tagtgcgctt gaacaggatt acacaacaca tgacgcactt 961 gacgcattac tagcagctct acagaacgca ggctacacaa atgttgtcgc aagggaaaga 1021 agatttccaa atggccacga ccctagcact gtctggttga acctaagcga ggcccccatt 1081 tcggagaagc taactgatct taaacggtac ctcttggttg gtcacagaag cgacgacact 1141 gcggacataa cacacaacgt gcaccagtac gttttcgagg ttcttaaaac catgtctgtt 1201 cagttcagca agacaacgaa cgcttacaac cgcgcccgtt tcgaggttaa ccacaagatc 1261 atttggaatg cggagtatgg gcgcggtcct caacaaaacg ccgagcttga agctcttgtt 1321 ttgtttctta ataggcaatc gctggagatt gagaacattc tgcacagaac aaccagtccc 1381 gttgtcgtga cggactggca gcctgatgtt cctcctgcag cacccgaagt tagccaagaa 1441 gaacccacac ttgcaactgc aacaccaata actgaagcgc cagcacacgc aactcccgtt 1501 gaagttgtga acctgccacc agcacgctct tattgggctg aaacacttgt tggcatacta 1561 accgcgattc tagggaccat cttcgcctta ctcacccgag cgctcattcg tgcaaagaag 1621 ttgcgaagga agtccacctt cccctgggta acactggatt ctggagacga agatgacgac 1681 cattctggag gaggaggagg tagcccacaa acacctggcg ggcagccccc agcctcgcca 1741 gcacatggaa cgcaccaatc acgcctctct gtgcaagaca tagcatcgga caccagcctc 1801 ttaagtgtgg acctcgacga agacacgctc tcccaatacg acgaaacctt ccagaggatt 1861 cgccgtgcgc tctttgaaac cagttttgca gacatcctgc aaaactctgc tcgctggatt 1921 tccacgttgg aagcaatggc tttagcagac ggcaacgccc cttacacgct tctcgcgcaa 1981 tatctcaatg gaattgagga gacgtacacg aactttcgta acacggggca tgtttcgcgc 2041 acaacactct ctggcttctt cgctttagaa gacagcctgc gcgcggccgg catagccttt 2101 ggagccacaa caccaacgca aactatacat aaccagtttg ctggctcccc agcccgccgt 2161 tggaaaacac gcttcgaaca aatcgcatgc gaattgggcg acgctagcat taaatcgctc 2221 gcggatcttg cgaatattat cgacaccgag cgtgaaagaa gtgacttgac tcagtttgat 2281 gttcttgcag cctcttccat aagcagtctc tgtcgtgccg tccgcatcat cagtgacaca 2341 actgatccag acgcacaact agccctcgtt gagaacgcga cagccatgca gaacaacatt 2401 aacgccatcc tggggacgaa tgttagcata cctttcctca gtgcaacacg tcgcctgctc 2461 atcacgcggc gcatccagca ggctggtgca gaaaatcgtt ctggcgcaac acctgacacc 2521 atacagcagc tggctgatgc tgaacttgct aaaattgtta gcgaggctaa catgttcaac 2581 gagatggccg ctagtcagag ggacatcgct aatgccacac gagaggccac cattcgtgag 2641 catgtgctca gtcctgttaa tgccctggca aatgttggca tggctgctgc tttcttccga 2701 tctggtggaa tgcgctcaag ggctcttcac cccgcgatgc caacaatgcc cggtgtttct 2761 gctgccacgg ggcggccaat gttccaagcc ttcagaggcc gaggacatcg tctcaacaga 2821 cgataaaact ctgtgctttt gcacagcact gaacaagcga cacacgcttg ttgtgataat 2881 tgattccacg ctcagcgtgc cactgaataa gcgacacacg cttgttgtga taattaatta 2941 atttttgcgc agactctgtc tgtgttttct agagtgtgct gctctgcagc tgcattggag 3001 ggtttcacgg gaacgacatc atcaccccat ccacaaaccg cctgcattca catattgtgc 3061 cactttaaat actcatacgc ataggcaagt gcctttctgg cagagcatcc ctgagtgatg 3121 gccactcacg cgatcgcaat caactgactt aatcctcggt tttgcaatca aatagtgagt 3181 cccacctccg gatctgttcc cctggaactg caatcctcgt tatgttgtcg ctgattacta 3241 tcagctcgta aaccatgata tccacccaca attagctact cgtgtactaa cagtaccgga 3301 tacgcctatc ctgcacttaa gcctgcagga cgctaccagg tccgcctact gttaccattt 3361 gtgtagttcg ttgtggttcc acctcatatc taaattcagt acctgcatac aaaacgtcat 3421 gcatccctgt tcaacatgaa cgcgggtttg ggaagaagca agtcatcata gactgctggc 3481 attgttaggt tgacaatgtt tatgtacaca ggaacgtgat //