LOCUS KX673244 9147 bp DNA linear VRL 27-DEC-2016 DEFINITION Basavirus sp. isolate 16845_79, complete genome. ACCESSION KX673244 VERSION KX673244.1 KEYWORDS . SOURCE Basavirus sp ORGANISM Basavirus sp. Viruses; unclassified viruses. REFERENCE 1 (bases 1 to 9147) AUTHORS Oude Munnink,B.B., Phan,M.V.T., Kellam,P., van der Hoek,L. and Cotten,M. TITLE The Vietnamese Posavirome: genome characterization of posavirus, husavirus, and posavirus-like viral agents from humans, pigs, rats and bats JOURNAL Unpublished REFERENCE 2 (bases 1 to 9147) AUTHORS Oude Munnink,B.B., Phan,M.V.T., Kellam,P., van der Hoek,L. and Cotten,M. TITLE Direct Submission JOURNAL Submitted (05-AUG-2016) Wellcome Trust Sanger Institute, Wellcome Trust Sanger Institute, Genome Campus, Hinxton CB10 1SA, United Kingdom FEATURES Location/Qualifiers source 1..9147 /mol_type="genomic DNA" /country="Viet Nam" /isolation_source="feces" /collection_date="18-Sep-2014" /host="Bat" /db_xref="taxon:1930507" /isolate="16845_79" /organism="Basavirus sp." CDS 48..8960 /codon_start=1 /protein_id="APQ44499.1" /translation="MESFEKNVGEERRREEMARVGSNSSFVERDLVNALNVEEDCIVD AQSIVSDLVNAPNVEFNEASVSVNAQEPMVVEDDKFEDLTEFLEKEFDETLFDDLSSS EDSDCEIGEDFIVEYFRNRVRYIIRNNLICSHYKPNEFKKCACMSVYRLKHGRRKYYF DELMLNDIKAILYELRMGAELKTVPYALISKIPTPSDYIRHKGIRMLCASADNDLECD PRKDRIEFLQEVYELREFYGIFGDKGEADKLNKTTFEAQGIPEYLKRIWDFITSTTQT ATDNIIEVIKACFKKILEIFESVFGFISDSISKVISSMFVKLRHAIIKWVDPIKAMKD AAGKDNCFLITCVVTIAVCLIIDIIGILSYKLSKTLIDKTIAYCQHKRMEGGFFAQGP QLDATAGLVTLVSLILGLSMGDMKVISDKCKSFMSVVSAGLGASWLAGSLFMALPIVV QTAIKMKFGSREEKDKAIIDDWLEKSMAVIRLKKIPQVLVSEDYYIWIRELVDSAMGL KSKIKSPMAINLFTRNLVSIMDILNLLDNYRLSKSFRDYPFSIHISAPPGYGKTLLTS SLVRDLFSVGEVDIFDRPVSSEFWDGFIGQKVVIFDEFLIGDKEYKMRVGKEYLEAVS TKVFKPPLASVDNPQCGIKGTVCEPIGVVTINNSLYEKVEGIPCQALWRRREAVIELK IAQDWTYLFANNKVDLSKLTAQQIKDKVWLKFNICSPEPNKRAGLTDLTYQEMMTYML EMRRKHMDTCDKIREGRETMIPLDRTPKQMLEDALRELKGVPNEPIGIMDSILQVLGD FKFDAFAQGNKKPQIEGKKEEDKTEENVSVKVNPEVKSWAEQMDEHVRSGMNECTNLF KEQLLKISRIVAPVDMSKRMEGLKPSTSGVSAISIETSSSSDEEQYGLNYAKVLRESV NREELSGDVREIMDEASSLPPNVPIAKIMDEASLLPPNDPIAKNIYNRINKSAKGRNS MEKLKSFHSKVYKEVSDYIDEHREIDFDPEEETAYGATFYDVIRLAAKFNFYVIRLRR TLEKMKIEDWVPYGFNLQELYNINCHYNPNWVGNPDDLVLINQKETVTTLNHEGVDPT KIHRHRCHGLVAERITNQFGQQITDLGTGEEAYRYRMCNRQFAHKHPANEVHDKLLCA DCARDGVSETFYQYHSSMIQKEKPGKLPVIIPVTELLPREYDYDYVEIDEETRDKLNK KYLEMYLAKFVDFGQIPLVFLEHCTDVEGDNCSYYYSMTPQDVWIGNIKAVARWVSIL SLVYAVRKLFFSSEKPDDMSGNSGEVLCFSQSARPTHVTRVQSRVKRFAKAQAADIDQ QVVFTIRGVEARGIPIKGKIFLTYYHAFYDGESMVAEGTKMLLQYGPHKGEMELSYSL MMVDPENDLAFVSITDNKFPAFPNNTKRFLSINEVAEIKSTSVYLPFLPNPLYATAVK VERRNYSHREAGKMTTLAEAWQYKCPTKVGDCGTMVKACGEIHPGKILGMHVAGGPAE KDMYGLAVIITKEDIVAALSPNVMDKEVPLPEFFTQGPIVRHEDYYGPNVIKVEEIPY GDQIFVNRVSKIKRSCISKDVPIGPFKNKPILSANDKRNFDKVDPLKAMMKECCSLSF TTSVDYDLVKTVFEDMYQYFDANLTFPFGKRTLTFEEALKGVPGKLCSMKVNTSAGFP LCKLSPKKGKTAWFGFSPNGELHYETEFKEMVDQFAYMVENKTYDTTDRRFLAFLKDE LVTDKKIHEGRNRVIYSGDLISNTYYRMMFGSLIAAFNNSYGNTSSAIGINQYSYDMH LLYNYLTQVGNKFIAGDFKNLDKLMHPIFKRLAYDLLMRLVADIVPKEAIYYFQTQQM SSPVQIEDVLVWLKSMHFSGLFLTTIINNVVHEGYIRYVFARLCPNEKFSDHMRIKLL GDDHIYCVSDYVMSDITPFNIREELALLGQVYTSDNKDQELKNEFRNFNEITFLGAHP VMIDGQYCGAMKKNTLIEMLHWTRNNNMSLREEIETAMDLATVWDREFFDDFVRMVKD AINNAEDASSLEGIKYPLYYETRRIVALRTAASGLDFPYNFTAQGPGLPEHSITNVKS GKLVSEDHTATSMKTKFQKLALNEVSLPLTFGTESTVYRDEFEWKTSDVVGTAIKSYD VPFGLLNNSTANNLQNMPFERFLYWKGDVKVVFQVNATPFQCGMLAVYFVPLAAYEAE LPNITTCSCVMIQPDQSATYEINIPFMYLRSVMNTRAKATESLGTLYVTPLAALSSVD TDQCTISMFSSFPNSEFTIPRPVEEGNKIKKFYRPTGEVQLVSNEGRSHFVAQGNSNS TVVHQNITNVGGEMPIQDLSVEAGGSAEQSIDANMDATIPMPLDNPPLCSGAIPVQQA FSGMAASHGVRPTVDMQLKPAALSRQHIEIFDPMETKISYLCGKKCLLTTLKLNKNMI PGTKLYEIELNTRLGVAEGAGIPINLAVLNQFVFWRADIEFELVAAMTKFHSTRIQMV CAYGSPSVDAAERNVMYSKIMNFSSSEEGTNYSDAWCVKYNQQTEFIRTYEGEKVSDK IQNYSLGSFAIFVQNSLIAPENVSSEIDLLLFVRFANVKVAVPRPNSPFTWNGALDYR YGLIYSFDNPIINSGQIVTIERNKMALKLDALHWVGDAPGTGTYHSADPTASMRINYR ATSGLIVGEKRIITKFQISSDGIVLYYDDLSEEPGAVDDQARCSDYVVPWRIVEVPIE FYAQGPVIQGEQTEQTTAEIDILPAESSTFEQTKERPNKPCKLEIGEKFEFCVSDVHE VGRRYVRIVPGNNPDLEQYMRISSTNGDIKQTIFNIGVQPWSMWKNLYCVWAGGLKYR IFDKEFVETAFVPYYNRDPLHPGVPIVDCFNGTTFQYLDKTVNTDDYSSGPLARERSY PISGTNFIDISTPFQSHFNMCYTNNTQLIAPISSGTLSIIKETEEKPILYNAMADDFR FGMYRPPEKTNFDMVAFSSGIGGFYN" /product="polyprotein" ORIGIN 1 tttaaaataa aatataaaag aaaaagaaag aaagagtaag aagaaaaatg gagagttttg 61 aaaagaacgt cggagaagag agaaggcggg aagagatggc tcgagttgga agcaactcaa 121 gctttgttga aagagattta gtgaatgcac tgaatgtaga agaagattgt attgtggatg 181 cacaatcgat agtaagtgay ttggtgaatg caccgaatgt tgagtttaat gaagcaagtg 241 tttctgtgaa tgcacaggaa ccaatggttg tagaagatga taaatttgaa gatcttacag 301 aatttttaga gaaagagttt gatgaaactc tttttgatga tttatcatcc agcgaagatt 361 ctgattgtga aattggtgaa gatttcattg ttgaatattt tcgaaatagg gtgagatata 421 taattagaaa taatttaata tgctctcact ataaaccaaa tgagttcaag aaatgcgctt 481 gtatgagcgt ttatcgtttg aaacatggac gaagaaaata ttactttgat gaattaatgt 541 tgaatgatat aaaagctatt ctatacgaat tgagaatggg tgcggaattg aaaacagttc 601 catatgcatt gatttcaaag attcctacgc ctagtgatta cataaggcat aagggaataa 661 gaatgttatg tgcttcggca gataatgatt tggaatgcga cccaagaaaa gataggatag 721 aatttttgca agaagtttat gaattacgag agttctacgg aatatttgga gataaaggtg 781 aagctgacaa gttgaataaa acaacttttg aagctcaggg tatccccgaa tatctcaaaa 841 gaatatggga tttcataact tctactacgc agacagccac agataatata attgaagtta 901 ttaaggcatg ttttaagaaa atattggaga tatttgagag tgtatttgga tttatatctg 961 attccatatc taaagtaatc tcgtcaatgt ttgttaaatt acgacatgct ataattaaat 1021 gggtagatcc tatcaaggcg atgaaggatg cagcaggtaa agataattgc ttcttgatta 1081 cttgtgtggt gacaatagct gtttgcttga taattgatat tataggtata ttatcatata 1141 aattgagcaa aactttaata gacaaaacaa tagcttattg ccaacacaaa agaatggaag 1201 gtggattctt cgctcaaggg cctcagttgg atgcaactgc aggtttggtg acattggtct 1261 cgttaatttt aggattatct atgggtgata tgaaagttat atctgataag tgtaaaagtt 1321 ttatgtcagt agtttctgca ggtttaggag cgtcctggtt agcgggttcg ctattcatgg 1381 cgcttcctat agttgtacaa actgccatta agatgaaatt tggatcgcga gaagaaaaag 1441 ataaggctat catagatgat tggttagaaa aatcaatggc tgttatacga ttgaagaaaa 1501 ttcctcaggt tttagtttca gaagattact acatttggat aagagaacta gtagatagtg 1561 ccatgggctt aaaatcgaag ataaagtcgc ctatggctat caatttgttt actcgcaact 1621 tggtgtcaat aatggatata ttgaacctgc tggataatta tagattgagt aaatccttta 1681 gggattatcc tttctctata catatttcgg cgcccccagg ttatggtaaa actttgttaa 1741 ccagttcgtt ggttcgagat ctattttctg ttggagaggt tgatattttt gacagacctg 1801 tttcatcaga gttttgggat ggatttatag gacaaaaagt agtaatattt gatgaatttt 1861 tgattggaga taaagaatac aaaatgcgag tgggtaaaga atacttagaa gctgtatcta 1921 ctaaagtttt taaaccccca ttagcttctg ttgataatcc ccaatgtgga ataaaaggaa 1981 cggtttgtga acctatagga gtggtaacaa ttaataattc actctatgaa aaagttgaag 2041 gaataccctg tcaggcatta tggagaagaa gggaggcagt aattgaatta aagattgctc 2101 aagactggac ctatttgttt gctaacaata aagttgactt atcaaagttg acagcacagc 2161 aaattaaaga taaggtctgg ctcaagttta atatttgttc tccagaacca aataaaagag 2221 cagggttaac agatttaacg tatcaagaga tgatgactta tatgttggaa atgagacgaa 2281 agcatatgga tacgtgcgat aagataagag aaggtcggga gaccatgatt ccattagatc 2341 gcacaccaaa acaaatgtta gaagacgcct tgcgtgaatt aaaaggagtt cctaatgaac 2401 ctataggtat catggactcc attttacaag tattaggcga ttttaaattt gatgcttttg 2461 ctcaaggaaa caagaagcca caaattgaag gtaagaaaga agaggataag actgaagaaa 2521 atgttagtgt taaggtgaac cctgaagtga aatcatgggc cgagcaaatg gatgaacatg 2581 tgagatctgg tatgaatgaa tgcactaatt tgttcaaaga acaattactt aagatctcaa 2641 ggattgtagc tccagtggat atgtccaaaa ggatggaagg gttgaaacca tctacctcgg 2701 gtgtaagtgc gattagtatt gaaacaagtt ctagtagtga cgaagagcag tatggtctaa 2761 actatgctaa agtattgaga gaatcagtta atagagaaga gttaagtggt gatgtacgag 2821 aaataatgga cgaagcgagt tcattaccac ctaatgttcc tattgcgaaa ataatggacg 2881 aagcgagttt gttaccacct aatgatccta ttgcgaaaaa tatatataat cgtataaaca 2941 aatcagctaa gggtagaaat tcgatggaga aattaaagag ttttcactct aaggtctata 3001 aagaggtgtc cgactatatt gatgaacacc gcgaaattga ttttgatcca gaagaagaga 3061 cagcctatgg agcaaccttc tatgatgtga ttagattggc tgcaaagttt aacttctatg 3121 tgatcaggtt gagaaggact ttggaaaaga tgaagataga agattgggtc ccttatgggt 3181 tcaatcttca agaactctat aatatcaatt gtcattataa tcccaactgg gtaggaaatc 3241 cagatgattt ggtattaata aatcaaaaag aaacagtgac aactttaaat catgaaggag 3301 tggatcctac aaaaattcat agacatcgtt gccatgggtt agtagctgaa cggattacta 3361 atcagtttgg acaacaaata acggatctag gtacgggcga ggaagcttat cgttatagga 3421 tgtgtaatag gcaatttgca cataaacatc ctgctaatga agttcatgat aaattattgt 3481 gcgcggattg tgctcgagat ggagttagtg agactttcta ccaatatcat tctagtatga 3541 tacagaaaga aaagcctggc aaacttccag ttataatacc agtcactgaa ttgttaccaa 3601 gagaatatga ttatgattat gttgagattg atgaggagac tagagataag ttaaataaaa 3661 aatatttaga gatgtattta gctaagtttg ttgattttgg acagattcct cttgttttcc 3721 ttgaacattg tacagatgtt gaaggagata attgtagcta ttattattca atgacgccgc 3781 aagacgtctg gattggcaac attaaagcag ttgccagatg ggtgagtatt ctgtcattag 3841 tttacgctgt gagaaagttg ttctttagtt cagaaaaacc cgatgatatg agtgggaact 3901 caggagaagt tttatgtttc tctcaaagtg cccggccaac tcatgttact cgagtccaat 3961 cacgagtaaa gagatttgct aaagcgcaag cggcagatat tgaccaacaa gtggtcttta 4021 caattagagg ggttgaagct agaggcattc ctataaaagg gaaaatattt ttgacatact 4081 atcatgcgtt ttatgatggt gaatccatgg ttgcagaagg tacgaagatg cttctacaat 4141 atggacccca taaaggtgaa atggaattgt cttattcatt aatgatggtt gatcctgaaa 4201 atgatttagc tttcgttagt attacggata ataaattccc agcattcccg aataatacga 4261 agagattttt gtcaataaat gaagtagcag agataaaatc aacatcggta tatctaccgt 4321 ttttgccgaa tccattgtat gccacagcgg ttaaggttga aagaagaaac tattctcata 4381 gagaagcagg aaaaatgaca acattagctg aagcgtggca atacaaatgt cctaccaaag 4441 taggagattg cggcactatg gttaaagcgt gtggagaaat acatccaggg aaaatattgg 4501 gtatgcatgt cgcgggaggg cccgctgaaa aagacatgta tggtctagca gtgatcataa 4561 caaaagaaga tattgttgca gctttgtctc ccaatgtcat ggataaagaa gttcccttac 4621 cggaattctt tactcaagga ccgattgtga gacatgaaga ttactatgga ccaaatgtaa 4681 taaaggtaga agaaatcccc tatggtgatc agatatttgt taatcgtgtg tcgaagataa 4741 agaggagttg tatctcgaaa gatgttccaa taggaccttt caagaataaa cctattttgt 4801 cggcaaacga taaacgtaat tttgataaag ttgatcccct aaaggcgatg atgaaagaat 4861 gttgtagtct gagttttacg acttctgtgg attatgatct tgttaaaacc gtttttgaag 4921 atatgtatca atattttgat gccaatctga cattcccctt cggtaaaaga acattgactt 4981 ttgaagaagc ccttaaaggt gttccaggaa agttatgctc tatgaaagtt aatacgtcgg 5041 ctggtttccc attgtgtaaa ttgtccccta agaaaggaaa aaccgcatgg tttggatttt 5101 cacctaatgg ggaattacat tatgagacag aatttaaaga aatggttgat caatttgcat 5161 acatggtgga aaataagact tatgatacta cagatcggcg gtttttagcg tttttgaaag 5221 atgagttggt tacagataaa aagattcatg aaggaagaaa tcgagtaatt tatagtggag 5281 atttgatttc aaatacttac tatagaatga tgtttgggtc cctaatagct gcttttaata 5341 acagctatgg aaacacttca tcagctatag gtattaatca atactcctat gatatgcatt 5401 tactctacaa ttacttgact caagtgggaa ataagtttat cgctggagac ttcaagaatc 5461 tagacaagct aatgcatcct atatttaaac ggttggctta tgatttgtta atgagactgg 5521 ttgcagatat agttccgaaa gaagctatat attatttcca gacccaacaa atgagttcgc 5581 cagttcaaat agaagatgtg ttagtatggt tgaaatcaat gcatttttca ggtttgtttt 5641 tgacaactat aattaataat gtggtgcatg aaggttatat taggtatgtt tttgcacgct 5701 tgtgtcctaa tgagaaattt agtgatcata tgagaatcaa actattggga gatgaccata 5761 tttactgtgt ttctgattat gtcatgagtg acataactcc tttcaatata agagaagaat 5821 tggccctttt gggacaggtt tatacatcag ataataagga tcaagaactt aagaatgaat 5881 tccgaaattt taacgaaata acatttttag gtgcacatcc cgtgatgatt gatggacagt 5941 attgtggagc tatgaagaaa aatactttaa ttgaaatgtt acattggact aggaayaaca 6001 atatgtcgtt gagagaagaa atagaaacgg caatggattt agcaacagtt tgggatcgag 6061 aatttttcga tgattttgta cggatggtaa aagatgcaat aaataatgct gaagatgctt 6121 catcattaga aggtatcaaa tacccgttgt attatgaaac tcgaagaatt gtcgctctaa 6181 gaacagctgc tagtgggctt gattttcctt ataattttac agctcaagga cctggtttac 6241 cagagcactc gataacaaat gtgaagtcag ggaaactcgt ctctgaagat cataccgcta 6301 cgtcaatgaa gactaaattt caaaaattgg cactaaatga agtttcttta ccattaactt 6361 ttggtacaga atctacggta tatagagatg agtttgaatg gaagacatca gatgtggtag 6421 gaacagctat taagagttac gatgtaccct ttggattatt gaataactca acagcgaata 6481 acctgcagaa tatgcctttt gaaaggtttt tgtattggaa gggtgatgtt aaagttgtct 6541 ttcaagttaa tgcaaccccc tttcaatgtg gtatgctggc agtttatttc gttcctttag 6601 cagcatatga agcagagttg ccgaatataa caacatgttc ctgtgtaatg atacaaccag 6661 accagagtgc gacctatgaa ataaatatac catttatgta tctcagaagt gttatgaaca 6721 caagagctaa agcaacggag tccttaggta ctttgtacgt tactccttta gcagcgttgt 6781 cttcagtaga cacggatcag tgtactatat cgatgttttc atcgttccct aattctgagt 6841 ttacaatccc aaggccagta gaagaaggta ataagattaa aaaattctat agaccaacag 6901 gtgaagtgca attggtatca aatgaaggta ggtcacactt tgtagctcaa ggyaattcga 6961 actcaacagt ggtacatcaa aatataacca atgtaggtgg agaaatgcca attcaagatt 7021 taagtgtaga agcaggaggt tcggcagaac aatcaattga tgcgaacatg gatgcgacta 7081 tacctatgcc attggacaac cctcctttat gttcaggagc gattccagtc cagcaagcgt 7141 tttcaggtat ggctgcttct catggagtga gaccgacagt tgatatgcaa ttgaaaccag 7201 cggctcttag taggcaacat attgaaattt ttgatccgat ggaaacgaaa atttcgtatt 7261 tgtgtggtaa gaaatgtcty ttaacaacat tgaaactgaa taagaatatg attccaggta 7321 ctaaattgta tgaaattgaa ttgaatacga gattaggtgt tgcggaagga gctggaattc 7381 ctatcaattt agctgttttg aatcaattcg tgttttggag agccgatata gagtttgaat 7441 tagtagcggc aatgacaaag tttcattcta cacggataca aatggtgtgt gcttatgggt 7501 ctcctagtgt tgatgcagct gaaagaaatg ttatgtattc taaaataatg aatttttctt 7561 cttctgaaga aggtactaat tattctgatg cgtggtgtgt aaaatataat caacaaacag 7621 agtttataag aacttatgaa ggagaaaaag tttctgacaa gatacaaaat tatagtttgg 7681 gttcatttgc aatttttgtt caaaattcat tgattgctcc tgaaaatgtt agttcagaaa 7741 tagatttgtt attgtttgta aggtttgcga atgttaaagt tgctgtaccg cgcccaaatt 7801 cccctttcac atggaatggg gctttggact ataggtatgg gcttatatat tcattcgata 7861 atcccattat taattcaggt cagattgtaa caatagaacg aaataaaatg gcattaaaat 7921 tggatgcttt gcactgggta ggtgatgctc caggaactgg tacttatcat tccgcagacc 7981 caactgcttc tatgaggatt aattatagag caacgtcggg tttaatagtg ggagagaaaa 8041 gaatcattac taaattccaa atttcatctg atgggattgt gttatattat gatgatttaa 8101 gcgaagaacc aggagctgtt gatgatcagg caagatgttc agactatgtt gtaccttgga 8161 gaattgtaga agtacctatt gagttttatg cccaaggtcc agtaattcag ggagaacaga 8221 ctgaacaaac tactgcagag atcgatattt tgccggccga aagttcaaca ttcgaacaaa 8281 cgaaagagag accaaataaa ccttgtaagt tagaaatagg agagaagttt gagttttgtg 8341 tgtctgatgt tcatgaagtt gggagaagat atgtcagaat tgttcctggt aataatccag 8401 atttagaaca atatatgaga atatcttcaa ctaatggaga catcaaacaa acgatcttca 8461 atattggagt gcaaccgtgg agtatgtgga agaatttata ttgcgtgtgg gcaggtggtt 8521 tgaagtatag gatttttgat aaagaatttg ttgaaacagc ttttgtaccg tactataata 8581 gggatccttt gcatcccgga gtaccaatag ttgactgttt caatggaact acttttcagt 8641 atctcgataa aactgtgaat acagatgact actcgagtgg tcctttggct agagagagaa 8701 gttatccaat ttctggaaca aattttattg atatctcaac ccctttccag agtcatttca 8761 atatgtgtta tacgaataac acacaattga ttgcaccaat aagctctgga acattgagta 8821 tcataaaaga gactgaagag aaaccgattt tgtacaatgc tatggctgat gattttcgat 8881 ttggaatgta tcgtcctcct gagaaaacca attttgatat ggttgcgttt tcttcaggga 8941 taggtggttt ttataattaa gaagaatgaa tgatcttgca agataaaatg attatcttag 9001 aagtatgatt tgtttttgtg ttttttggtg aagggctttt taaatcctta agatttaaga 9061 ggactattgg attatatatg ttttaaagta ttggatgaat aaaaaacaaa aatgaaaata 9121 aaaatcaaaa aaaatgaaaa ttctgtg //