LOCUS NC_035758 6339 bp RNA linear VRL 31-AUG-2017 DEFINITION Bastrovirus 7, complete genome. ACCESSION NC_035758 VERSION NC_035758.1 DBSOURCE BioProject accession PRJNA401021 KEYWORDS RefSeq. SOURCE Bastrovirus 7 ORGANISM Bastrovirus 7 Viruses; ssRNA viruses; ssRNA positive-strand viruses, no DNA stage; Astroviridae; unclassified Astroviridae. REFERENCE 1 (bases 1 to 6339) AUTHORS Oude Munnink,B.B., Cotten,M., Canuti,M., Deijs,M., Jebbink,M.F., van Hemert,F.J., Phan,M.V.T., Bakker,M., Jazaeri Farsani,S.M., Kellam,P. and van der Hoek,L. TITLE A novel astrovirus-like RNA virus detected in human stools JOURNAL Unpublished REFERENCE 2 (bases 1 to 6339) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (31-AUG-2017) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 6339) AUTHORS Oude Munnink,B.B., Cotten,M., Canuti,M., Deijs,M., Jebbink,M.F., van Hemert,F.J., Phan,M.V.T., Bakker,M., Jazaeri Farsani,S.M., Kellam,P. and van der Hoek,L. TITLE Direct Submission JOURNAL Submitted (17-DEC-2015) Wellcome Trust Sanger Institute, Genome Campus, Hinxton CB10 1SA, UK COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to KU318321. ##Assembly-Data-START## Assembly Method :: SPAdes v. 3.5.0; Improve_assembly v. 1 Sequencing Technology :: Illumina ##Assembly-Data-END## COMPLETENESS: full length. FEATURES Location/Qualifiers source 1..6339 /mol_type="genomic RNA" /db_xref="taxon:1803394" /country="Netherlands" /isolation_source="feces" /organism="Bastrovirus 7" /host="Homo sapiens" /note="collected between 1984 and 1985" gene 11..3850 /locus_tag="CK923_gp1" /db_xref="GeneID:33913758" CDS 11..3850 /locus_tag="CK923_gp1" /db_xref="GeneID:33913758" /codon_start=1 /protein_id="YP_009422196.1" /translation="MAWLAHYDADLRAGFLDKVPSRERVNKAFIARYFLTEDEQSLLR DVLRGDVIYCPTVANSHPMLRTFHSYAEWIVDHTMKPWGRFLDIGGNPRLASDRRHVV VLANNARDQLRLARTPGAASAFANGHLCLQGAANCEHGPFSTRAVAVHSAYDITPTDW FLIMSRNRINLVDVFMWDPDELHGGVTLPSTDAFGFRLDMDEDEDTALFLPLDGSPGY KHSLENWRWYREGHATCGPYQLVTFCEHVWGPFRQYSLVLTLLPVTRVFFKSPLNRDW VHVPVLGKDKYVAVPTQKWRAALNWGFSRIDTNFSRSNLAAYLRAISARVVIGSREYT SAWNPDEWTFAEVVTTAFVMCAVLRSYGSTTIGAAMKELSYELKNDPPGWWKRSWRWV KSWFTEVEDFSIPDWDPEPSTLLALVADHIIGDLSIMEEGPKSPPCLTMDVPPPTPPE KPQNDRPDFRRYRPQAIDGAPTPQLRDSIAKLDAATGGARHTVVLVEGPPGSGKSSGI RNRLGPEQARVLVITPVGKLAEAWREKGFSNVVTHHKAASLLPGNWKWIVVDEAFMMH PGLLDMYAACAPLILLGDCRQIGFIDWERNTPDYGAAQLREWADQRESCNLSYRVPED AATLVSSFSEPFGSASPVKNSLFLINRPDEFPGIHAGTTHLCFTQAVKKRIQDRVKEL KLEGQNVMTVHEAQGLQFKHVALHLDVSERMFIVSHPEHMAVGLSRHTESLVITEHGY TLTDAIQALRTPLGEVEVIPQEFVPRTTVSFTEALEKVDLKTIQESGGQAGDLGVERP VASVHTAAAENLVKPVQISLAVEPDTVMAHVPANSPFMVMPTKSTDHAQAQAAVVQRP ATVAPTKATGVDAERARTHVTRFLTMACNEVPQVDFADLQESLAEALRKIHDKNGSFV RYLQDDDGEFLDEWIKRKVPRDEGPAHLALLVNGFLKTQRKFCPELKLKPGQPIQPVN HLINLFFSQVFRAVAAALKGAFKDNVLFVDGHSEKQLSAFVARHYDWRDSYLANDFTA FDSTQGERTMLLEAEVLRRVGIDQNIIDLYREFRLNARYSGPGADIPAAGMRMSGEAN TLLGNTLVTGILHCAYVSQEPAWMMFKGDDAILAGPDSMDVDVKSMSKDYGMKAKLER MPVPEFVSFFISPYGLLPDFFRIANKMVANDHQSSPEWREASAANAKAILALADNPAA PAFAMLAAEKKYGITPEQSWAAFTIVCDRANGKFEEATPNLKVKLKVNPDPPISFHRT TLAESRAVQPRHRVDGV" /product="non-structural polyprotein" gene 3873..5885 /locus_tag="CK923_gp2" /db_xref="GeneID:33913756" CDS 3873..5885 /locus_tag="CK923_gp2" /db_xref="GeneID:33913756" /codon_start=1 /protein_id="YP_009422197.1" /translation="MAPTPKSQAAPKRTRNAQKPRIQLKPKPRPQKRNPQAKTVQSLA RRVQRAERAATGPAPAVKHTVTATLGTIGPNTSSGTELEFALPLHPGLVKETAAVNSF GPLQSAVGQYSMWRLVGFHVHLTPMVGSSAISGTVYRVSLNLSGQPTSTAWSGLGARQ HRDATPGSHLRWAVSDAILAGPKATWWYSNTNAPGVSALGPVLELHSIGATQSAYQAK PFEGPVFLLEIRGTWEFVNYAAAPALSLLSSGKGTGSLSGQAGQPLTVKVAEPHLQRM VALQAGNAPSGVGEVIYMLVDTAVTALADTAAPPWSWMIRAGWWFARALVGGSNGDGT LQLYSSFEDAANNRPCILSGDAHGELGSLQITQLTTPSSGLNAIGDGIVGMPSPGTTP IQPGASFTLPVSLSPLPQHVSVPGGYWVNGHSGTEASQLRGFITAPLGGANVAHFEAA FMVTGSEGPGFGFEGVAQVIEVMGVGYPMLILATGQIHCVQGTSNTYLLWWLVRSLGT ANQDNATDYYVSQPSFTLTTNEMVQCNWTQAHLTMPPTQEGMWLLMGFRGGPPSTLQV KGHTLPFHPGTEVQFVPSAYDWFRWGPTTMVLSGTALGDGVYGSALHQRLAMLTLTEP LTQRVELIHNTATGPERSDSCQEDVFEPALGDPAHADHAGSHPGSH" /product="structural polyprotein" gene 5815..6228 /locus_tag="CK923_gp3" /db_xref="GeneID:33913757" CDS 5815..6228 /locus_tag="CK923_gp3" /db_xref="GeneID:33913757" /codon_start=1 /protein_id="YP_009422198.1" /translation="MFSSPLWEILLTPTMQAAIRVLTDLGVVPVVRSGCHRVFVPGGL GHHPHYVAKWFYTIQIDPRPGTPAFPATITLAIGARFACREAAMSDAALQIDPLELAD HVLIGPSDQQRLAFRYWYYEALQSQLDLILEEPVD" /product="ORF3" ORIGIN 1 cacgctgaga atggcgtggc ttgcccatta cgatgccgac ctgcgggccg gcttcttgga 61 caaagtaccc tcgagagaga gggtcaacaa agcatttata gccagatatt ttctgactga 121 ggatgagcaa tctctcctcc gagacgtctt gcggggtgac gtcatttact gccccacggt 181 ggccaactcc caccccatgc tgcgcacttt ccacagctac gcggaatgga tcgtggatca 241 tacaatgaaa ccttggggcc gtttcctaga cataggcggg aacccccgcc tagcctccga 301 caggaggcac gtggtcgtcc tcgccaacaa tgcgagggac cagctacgac ttgcccgcac 361 gccaggcgct gccagcgcct ttgcaaacgg acatttgtgc ctgcaagggg ccgcaaattg 421 cgaacacggc cctttttcca cccgggctgt cgccgtccat tcggcgtatg acattacacc 481 caccgattgg ttccttatca tgtcacggaa ccgtatcaat ctggtggacg tgttcatgtg 541 ggacccagat gagctccatg gaggggtcac cctcccgagt acggatgcct tcggcttccg 601 gctggatatg gatgaagacg aggacaccgc actcttcctc ccacttgatg gatcgcccgg 661 ctacaagcat tccctcgaga actggcgctg gtaccgggaa ggtcacgcta cttgcggccc 721 gtaccagctg gtcacctttt gtgagcacgt ctggggacct ttcagacagt actcgctagt 781 tctcacctta cttccagtga ccagagtttt cttcaagagc ccgctaaacc gtgactgggt 841 ccatgtgccg gtcctgggca aggacaagta cgtggccgtc ccaacccaga aatggagggc 901 tgctcttaat tggggattct ctaggataga cactaacttc tccaggtcca atttggctgc 961 ataccttcgt gcaatctctg cgcgagtggt cataggttcc agggaataca ccagcgcctg 1021 gaaccccgat gagtggactt tcgctgaggt ggtcaccacc gccttcgtga tgtgtgccgt 1081 cttgaggtcc tacggctcta ccaccatcgg ggcagccatg aaagagctgt cctatgagtt 1141 gaagaatgac cctccaggct ggtggaagcg gtcctggagg tgggtcaagt cctggttcac 1201 tgaagtggaa gacttttcca tcccggactg ggaccctgaa ccaagcaccc tgcttgcgtt 1261 ggtcgctgac cacatcatag gtgacctcag catcatggaa gaaggtccaa agagcccccc 1321 ttgcctcacc atggatgtgc ccccaccaac tccacccgaa aaaccccaga atgaccgtcc 1381 agatttccgc aggtaccgtc ctcaggccat agacggtgca cctacacccc aactgcggga 1441 ctccatagcc aaactggatg ccgccactgg gggggcgagg cacactgtcg tcctggtcga 1501 gggcccaccc ggtagtggga agtcctcggg catccgcaac cggttgggtc ccgagcaggc 1561 gcgcgtcctg gttatcacac cagtgggcaa gctggccgag gcttggaggg aaaagggttt 1621 cagcaatgtt gttacccacc acaaggcagc ctcactgctc ccgggtaact ggaaatggat 1681 agttgtggat gaagccttta tgatgcaccc tgggctgctt gacatgtatg cggcttgtgc 1741 acccctcatc cttctgggtg actgccgcca aatagggttc attgattggg agaggaacac 1801 accggactac ggagccgccc agttgcgtga gtgggccgac caaagggagt cctgcaacct 1861 gtcctaccgg gttcctgagg atgcggcgac cctggttagt agcttctcag aaccgttcgg 1921 gtccgcttcc cctgtcaaga actccctgtt cctcatcaac cggccggatg aattccccgg 1981 gatccatgca ggcactaccc acctgtgctt tacccaggcc gtcaagaaga ggattcaaga 2041 ccgggttaag gaactgaagt tggaaggcca gaatgtcatg actgttcacg aggcccaagg 2101 cctccaattc aagcacgtcg cactccacct ggacgtgtca gagaggatgt ttatagtgtc 2161 ccatcctgaa cacatggccg ttggcctgtc acgccacaca gaatcgctgg tcattaccga 2221 gcacggttac accctgaccg atgccatcca ggctctccgg accccattgg gagaggttga 2281 ggtcatcccc caagagtttg tcccccgaac cactgtctct ttcactgagg ccctggagaa 2341 ggtggaccta aagaccatcc aggagtccgg cggccaagcc ggagatttgg gggtggagag 2401 gccggtcgcc tcagtccata cggcggccgc agagaatttg gttaaaccag tccagatatc 2461 cttggccgtg gaacccgaca cggtcatggc ccatgttcct gccaattccc ctttcatggt 2521 catgccaacc aaatccaccg accatgccca ggcccaagca gctgtcgtgc agagacccgc 2581 caccgtcgcc cctaccaagg ccaccggggt cgatgcggaa agggctagga cccatgttac 2641 caggttcctc accatggctt gcaatgaggt gccgcaggtt gacttcgctg atcttcagga 2701 gtctttggct gaggccctgc ggaagatcca tgacaagaac gggtccttcg tgcggtacct 2761 ccaggatgat gatggggagt ttttggatga atggatcaaa aggaaagtgc cacgggatga 2821 agggcctgcc cacctggctc tcttggtcaa cggtttcctc aaaacccagc gcaagttttg 2881 cccggaactc aagctgaaac ccggtcaacc gattcagcca gtgaaccatc tgatcaacct 2941 tttcttctcc caggtcttcc gggcagtggc ggcggcactc aagggggcgt tcaaagacaa 3001 cgttctcttt gttgatggcc attcggagaa gcaactttcc gccttcgtgg cacgccacta 3061 tgattggagg gattcctatc tggccaatga cttcacagct ttcgattcca ctcaggggga 3121 gcgcactatg ttgctcgagg ctgaggtgct ccgacgggtc ggcattgacc aaaacatcat 3181 agacctgtac cgggaatttc gtctcaacgc cagatattca ggtcccggcg ctgacatccc 3241 ggcggccggg atgcgcatgt ccggggaggc caataccctc ctgggcaaca ccctcgtcac 3301 tggaattctt cactgtgcct acgtcagcca ggagcccgcc tggatgatgt tcaaagggga 3361 tgacgccatc ctggcagggc cagatagcat ggatgtggac gtcaaatcca tgtccaaaga 3421 ctacgggatg aaagccaagt tagaacggat gcctgtgcct gaattcgtct ccttcttcat 3481 ttcaccctac ggcctgctgc cagacttctt caggattgca aataaaatgg tggccaatga 3541 ccaccagtcc tccccggagt ggagggaggc ttctgccgcc aacgccaagg ccatcctcgc 3601 attggccgac aaccctgcag cccccgcatt cgcaatgctg gcggctgaga agaagtacgg 3661 cataacgcca gagcagtcct gggcggcctt cactatcgtt tgcgacagag ccaacggaaa 3721 atttgaggaa gccacaccaa atctcaaagt caaattgaaa gtgaatcctg atcctccaat 3781 ctcatttcat aggacgaccc ttgccgagtc tagagcagtc caacctagac atagggttga 3841 tggagtttaa taatcagtga attacagccg caatggcacc aacacccaag agccaggcgg 3901 cacccaaacg cacccgaaat gcccagaagc ccagaatcca actcaagccc aaaccccgtc 3961 cccagaaacg gaatcctcag gccaagactg tccagtctct tgcccgccgg gttcagaggg 4021 cggagcgcgc ggcgacaggc cccgcccccg cggtcaagca caccgtcact gccacccttg 4081 gcaccattgg acccaacacc tcctccggaa ccgagctcga gtttgcactc ccccttcacc 4141 ccgggctggt caaggagacg gccgcggtta acagctttgg ccctctccag tctgcagttg 4201 gccagtactc catgtggcgt ctggtcggat ttcatgtcca cctgacgccc atggtagggt 4261 cgagtgccat ctctggcacc gtctaccggg tctccctgaa tctctccggc caacccacat 4321 ccacggcatg gtcgggcttg ggtgctcgcc agcaccgtga cgcaactccg gggagtcatt 4381 tacgctgggc agtctctgac gccattcttg ctggacccaa ggccacttgg tggtacagta 4441 acaccaatgc acccggagtt agcgccctgg gccccgtcct ggaactccac tccatagggg 4501 ccacccagag tgcctaccag gccaagcctt ttgaggggcc ggtcttcctc ttggaaatac 4561 gggggacatg ggagtttgtc aactacgccg ccgcccctgc cctctcactc ctcagttcag 4621 gtaagggtac cggtagcctt tccggccagg ccggtcagcc cctcaccgtc aaggtggcag 4681 aaccccatct tcaaagaatg gtggccctcc aagccggtaa cgccccttcg ggggtcggag 4741 aggtcatcta tatgctggta gacactgccg tcaccgcctt agcagacaca gccgccccac 4801 cctggtcctg gatgatcagg gcgggttggt ggttcgcccg tgccctggtg ggtggatcca 4861 acggtgacgg caccctccag ctttacagct cctttgagga cgctgcaaac aaccggccgt 4921 gcatactttc gggtgatgca catggtgagc tgggatccct ccagatcacc caattgacga 4981 ctccgtcctc agggctcaac gccatcgggg acgggatcgt agggatgccg agtccgggta 5041 ccactcccat ccagcccggc gcttccttca cgttgccggt gtccctttca cctctacccc 5101 aacacgtgtc cgtcccaggt ggttactggg ttaacggcca cagcggaacc gaggcttccc 5161 aacttcgtgg cttcatcacc gcgcctctcg gcggcgctaa cgtcgcccac tttgaggccg 5221 ccttcatggt caccgggtcc gaagggccgg ggtttggctt tgaaggcgtt gcccaagtga 5281 tcgaggttat gggggtaggt tacccaatgc tgatactggc cactggtcag atccactgcg 5341 tccagggcac cagcaacacc tacttgttgt ggtggcttgt gcgctcgctt ggcaccgcga 5401 accaggataa tgccacagac tattacgtct cgcaaccttc tttcaccttg accacgaacg 5461 agatggttca gtgcaactgg acccaagccc acttgacgat gccaccgacc caggaaggga 5521 tgtggcttct gatgggcttc cgtgggggac ccccctcgac cttgcaggtc aaaggccata 5581 ccctgccttt tcacccgggc acggaggtcc aatttgtccc ctcggcttat gactggttta 5641 ggtggggacc cacaaccatg gttcttagcg gtacagcatt gggggatggc gtgtacggat 5701 ccgccctcca ccagagactg gccatgttga cattgactga acccttgacc caaagggtgg 5761 agttaataca caatacggct acagggcccg aaaggtctga ctcatgccag gaagatgttt 5821 tcgagcccgc tctgggagat cctgctcacg ccgaccatgc aggcagccat ccgggttctc 5881 actgatctcg gcgtggtacc tgttgtccgg tctggctgcc accgtgtttt tgtacccggt 5941 ggccttggtc atcaccctca ttatgtcgcc aagtggttct acaccatcca gattgacccc 6001 agaccgggaa cgcccgcctt ccccgccacg atcaccctgg cgatcggagc caggtttgcg 6061 tgccgagagg cggcgatgag tgatgcggcc ctccagattg acccactgga gctcgccgat 6121 cacgtactga taggtccctc ggaccagcag cggctagcct tccgctactg gtattacgag 6181 gcccttcagt ctcaactgga tctcatccta gaggaaccag ttgactaact taggctaaac 6241 cttaggaccg gcaccgcttg ccggattatt cactctttgg tcctcccacc gctaacggtg 6301 gggggccccc cagggcccga aaggtctgac tcataccag //