LOCUS NC_014468 4286 bp DNA linear VRL 20-SEP-2010 DEFINITION Bat adeno-associated virus YNM, complete genome. ACCESSION NC_014468 VERSION NC_014468.1 DBSOURCE BioProject accession PRJNA51735 KEYWORDS RefSeq. SOURCE Bat adeno-associated virus YNM (BtAAV) ORGANISM Bat adeno-associated virus YNM Viruses; ssDNA viruses; Parvoviridae; Parvovirinae; Dependoparvovirus; unclassified Dependovirus. REFERENCE 1 (bases 1 to 4286) AUTHORS Li,Y., Ge,X., Hon,C.C., Zhang,H., Zhou,P., Zhang,Y., Wu,Y., Wang,L.F. and Shi,Z. TITLE Prevalence and genetic diversity of adeno-associated viruses in bats from China JOURNAL J. Gen. Virol. 91 (PT 10), 2601-2609 (2010) PUBMED 20573859 REFERENCE 2 (bases 1 to 4286) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (24-AUG-2010) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 4286) AUTHORS Li,Y., Ge,X. and Shi,Z. TITLE Direct Submission JOURNAL Submitted (23-NOV-2009) Wuhan Institute of Virology, Chinese Academy of Sciences, 44 Xiao Hong Shan, Wuhan, Hubei 430071, China COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to GU226971. COMPLETENESS: full length. FEATURES Location/Qualifiers source 1..4286 /mol_type="genomic DNA" /country="China" /acronym="BtAAV" /collection_date="2008" /host="Myotis ricketti" /db_xref="taxon:727962" /strain="YNM" /organism="Bat adeno-associated virus YNM" gene 200..2041 /locus_tag="BtAAVgp1" /db_xref="GeneID:9714218" /gene="Rep" CDS 200..2041 /locus_tag="BtAAVgp1" /protein_id="YP_003858571.1" /gene="Rep" /note="non-structural protein" /db_xref="GeneID:9714218" /codon_start=1 /product="rep protein" /translation="MEFYSIVLRLPGDFDSEVPGLQDSFYKWISGPRRELPEWSDLDP GQIESAYQILADKLVREFAQKWAAFSEDPRAPYFAQLEKGRENFHVHVLASSKKVGSF VVGRYVRKMRQHLVDVVFRKCEPVDADWLQVQKSGNHKSNEIKDEGFIPAYLLPKRQS ELQWAWTNIEKYERATLSVAERARLVEEWKRSLAAEESDPAEPERRPRKSTKSASEYM ALVRWLVDNGIATEREWMREDSDGYLSYNATGATRAQIKAALDNAARIMVNTKTAADY LVGRNPPLDVEDNRIYRLFRMNGYDPAYAGSVLLGWCRTGFGKRNTVWLFGPATTGKT NLAEAISHSVPFYGCVNWTNENFPFNDCVDKMIIWWEEGKMTSKVVESAKAILGGSKV RVDQKCKNSQQIEPTPVIITSNTNMCEVVDGNSTTFEHRQPLEDRMFKFELTVRLQPT FGKITKQEVREFFKWAELNAVDVEYDFLVRKINQSDTGGGVKRGAEPTKDEPPAKRVF FYGATSEGEDVREGAPGESDSVNFAERYVSKCSKHLSWSNMRYPCRACERMNADVNVC TPHGCRDCPECFPRPAPVPIAEHDLCLAPIEDSDFYVGCIDDVNKEQ" gene 2059..4233 /locus_tag="BtAAVgp2" /db_xref="GeneID:9714217" /gene="Cap" CDS 2059..4233 /locus_tag="BtAAVgp2" /protein_id="YP_003858572.1" /gene="Cap" /db_xref="GeneID:9714217" /codon_start=1 /product="cap protein" /translation="MSFVDHPPDWLEEIGEGLSEFIGLEAGPPKPKPGYQDRARGLVV PGYKYLGPFNGLDRGEPVNAADAAAKKHDEEYDRLLKAGDNPYLAYNHADAEFQKDLS GDSSLAGNAANALFQAKKRVLEPFGLVEGEPEPKKTPSVKRPHASPDSSSGVGKKGDQ PARKRLDFGTEPAGQDGAGRAAQAAGDMASAEVAAGGGGPVGDDAQGADGVGNASGNW HYDSVWMDGAVITKSTRTWSLPAYNNHLYRQIQSSGTGDGTYFGYSTPWGYFDFNRFH CHFSPRDWQRLINNHWGIRPKRLHFKLFNIQVKEVTTTDGTTTIANNLTSTIQVFADT EYQLPYVLGNAHEGCLPPFPADVFMLPQYAYLTLNANPTNQGAAALSLPQSAFYCLEY FPSQMLRTGNNFSFSYEFEKLPFHSMFMHSQSLDRLMNPLIDQYLWYLNATTGNNLSF NKAGAKNFPEYFRNWLPGPGQRVQQWSTIGTQNNAQTGTWASANKWILMGRSSKMAPG LAQPVRNAQTVTNGSQLIFNNETIKGSTATASTVHSGLLVTNESETAPTNPNSATKWG VMTDNQQTTSTTPTVSDDLEAHVFPGMVWQDRDIYLQGPIWAKIPETDGHFHPSPLMG GFGLKNPPPQILVKNTPVPAVPPTTFTPQKVNSFITQYSTGQVTVEIEWELRKEKSKR WNPEIQYTSNFENSANVQFSVNGDGAYIEPRPIGTRYLTHNL" ORIGIN 1 aagaaacctc taatcatcat ctgtactttg tgagggtgtg gtcgtgagaa cgggcatgcc 61 cgggcatgtc ctgttaatca ttaaccagaa tggactttgg acttaataag ttacgtatta 121 atgggtgtgt atataagtaa gtgtatttcc ggactcactc attcgacttc cggcggtcga 181 ggagcgaaga cgcgaagcca tggagttcta cagcatcgtt ctccgcctgc ccggcgactt 241 tgactcggag gtgccgggcc tgcaggacag cttctacaag tggatatccg ggccccggcg 301 ggagctgccg gagtggtcgg acctggaccc gggtcagatc gagtcggcgt atcagattct 361 cgccgacaag ctggtccgcg agtttgcgca gaagtgggcc gccttcagcg aggacccgag 421 ggcgccgtac tttgcgcagc tcgagaaggg ccgggagaac ttccacgtgc acgtgctcgc 481 ctcctccaag aaggtcgggt cgttcgtggt cggccgctac gtcaggaaga tgcgccagca 541 cctcgtcgac gtcgtcttcc ggaagtgcga gcccgtcgac gccgattggc tgcaggtgca 601 aaagagcggg aaccacaagt ccaacgagat caaggacgag ggctttatcc ccgcctacct 661 gctgccgaag cgccaatcgg agctgcagtg ggcgtggacg aacatagaaa agtacgagcg 721 cgccacgctg agcgtcgcag agcgcgccag actcgtcgag gagtggaagc ggagcctcgc 781 cgccgaggaa tctgaccccg cggaacccga acgccgtccg cgaaagtcga ccaaatccgc 841 gtcagaatac atggcgctcg tcaggtggct cgtggacaac ggcatcgcga ccgagcgcga 901 gtggatgcgc gaggactcgg acgggtacct gagctacaac gccacgggcg ccacgcgcgc 961 ccagatcaag gccgcgctcg acaacgcggc ccgcatcatg gtcaacacga agacggccgc 1021 cgactacctg gtcggcagga acccgcccct cgacgtggag gacaacagga tctaccggct 1081 gtttcgcatg aacggctacg accccgccta cgcgggcagc gtgctgctcg gctggtgccg 1141 caccggcttc ggcaagcgca acaccgtctg gctcttcggg ccggccacga ccggcaagac 1201 gaacctcgcc gaggccatca gccactcggt gcccttctac ggctgcgtca actggaccaa 1261 cgagaacttc cccttcaacg actgcgtgga caagatgatc atctggtggg aggagggcaa 1321 gatgacgtcc aaggtcgtcg agagcgccaa ggccatcctc ggcggcagca aggtgcgcgt 1381 cgaccagaag tgcaagaact cgcagcagat cgagcccacg cccgtcatca tcaccagcaa 1441 caccaacatg tgcgaggtcg tcgacgggaa ctcgaccacg ttcgagcacc ggcagccgct 1501 cgaggacagg atgttcaagt tcgagctcac cgtcaggctg cagcccacct tcggcaagat 1561 caccaagcag gaggtgcgcg agttctttaa gtgggcggag ctcaacgccg tcgacgtgga 1621 gtacgacttt ctcgtgcgca agatcaacca atcggacact gggggcgggg ttaagcgcgg 1681 ggcagagcct acaaaggacg agcctcccgc gaagcgcgtg ttcttctacg gcgcgacttc 1741 ggagggagag gacgtccgcg agggagcccc gggggaatct gactccgtga acttcgccga 1801 gaggtacgtg tcaaaatgct cgaagcacct gtcctggtca aatatgcgct atccctgccg 1861 cgcctgcgag cgcatgaacg cggacgtgaa cgtctgcacc ccccacggat gcagagactg 1921 tcccgagtgc tttccccgcc ccgcccccgt cccgatagcc gagcacgacc tgtgcctggc 1981 cccgatcgag gactctgact tttacgtcgg ctgtatcgac gacgtcaata aagagcaata 2041 aaatgattta cagcagtcat gtcgtttgtc gatcaccccc cagactggct cgaggagatc 2101 ggagaggggc tctccgagtt catcggacta gaggcgggac cgccgaagcc taagccgggc 2161 taccaggacc gcgcgcgcgg cctcgtcgtc cccggctaca agtacctcgg gcccttcaac 2221 ggactcgaca ggggcgagcc cgtcaacgcg gccgacgcgg cggccaagaa gcacgacgag 2281 gagtacgacc ggctcctcaa ggcgggggac aacccgtacc tcgcctacaa ccacgcggac 2341 gccgagttcc agaaggacct cagcggcgac tccagcctag ccggcaacgc cgcgaacgcg 2401 ctcttccagg ccaagaagag ggtcctcgag cccttcggac tggtcgaggg agagccggag 2461 cccaagaaga cgccttccgt caagaggccg cacgcatcgc cggactcgtc gagcggcgtc 2521 gggaagaagg gcgaccagcc cgcgcggaag aggctcgact ttgggacgga gcccgcgggt 2581 caagacggag cgggacgagc ggcccaggca gccggagata tggcatctgc tgaggtggct 2641 gcgggtggtg gcggaccagt gggcgacgat gcacaaggtg ccgatggagt gggtaatgcc 2701 tcaggaaatt ggcattacga ttccgtttgg atggacggcg ctgtcatcac caagtccacc 2761 cgaacctgga gcctgcccgc ctacaacaac cacctctacc gccagatcca gtccagcggc 2821 accggagacg gcacgtactt tggttacagc acgccttggg gatacttcga tttcaatcga 2881 ttccactgcc acttttctcc cagggactgg cagcggctca tcaacaacca ctggggcatc 2941 cgccccaagc ggctccactt taagctcttc aacatccagg tcaaggaggt cacgacgacc 3001 gacggcacca cgaccatcgc caacaacctc accagcacca tacaggtctt tgcggacacg 3061 gagtaccagc tcccgtacgt gctcggcaac gcccacgagg gctgcctgcc gccgttcccg 3121 gcggacgtct tcatgctgcc gcagtacgcg tacctgacgc tcaacgccaa ccccacgaac 3181 cagggcgcgg ccgcgctcag cctgccgcag agcgccttct actgcctgga gtactttccg 3241 agccagatgc tgaggaccgg gaacaacttc tcgttcagct acgagttcga gaagctgccc 3301 ttccactcga tgttcatgca cagccagagc ctggaccggc tcatgaaccc gctcatcgac 3361 cagtacctct ggtacctcaa cgccacgacc ggcaacaacc tctccttcaa caaggccggc 3421 gccaagaact tccccgagta cttccgcaac tggctgcccg ggcccggcca gcgcgtgcag 3481 cagtggagca cgatcggaac ccagaacaac gcgcagaccg gcacgtgggc cagcgccaac 3541 aagtggatcc tcatgggcag gtccagcaag atggcccccg ggctggccca gccggtcagg 3601 aacgcccaga ccgtcaccaa cggctcgcag ctcatcttca acaacgagac catcaagggc 3661 tccaccgcga cggcctccac cgtacactcg gggctgctcg tcaccaacga gtcggagacc 3721 gccccgacca accccaactc ggcgacaaag tggggcgtca tgacggacaa ccagcagacc 3781 acctccacta cgccgaccgt cagcgacgac ctcgaggcgc acgtcttccc gggcatggtc 3841 tggcaggacc gcgacatcta cctgcagggc ccgatatggg ccaagatccc ggagacggac 3901 ggccacttcc acccgtcccc gctcatgggc ggcttcgggc tcaagaaccc gccgccgcag 3961 atcctcgtca agaacacgcc cgtgcccgcc gtgccgccca cgaccttcac accgcagaag 4021 gtcaactcct tcatcacgca gtactccacc ggccaggtca ccgtcgagat cgagtgggag 4081 ctgcgcaagg agaagagcaa gcgctggaac cccgagatcc agtacacctc caacttcgag 4141 aactcggcca acgtacagtt ctccgtcaac ggcgacggcg cgtacatcga gccgcgaccg 4201 atcggaaccc ggtacctcac ccacaacctg taaataaatc ccccaataaa ccgtgtattc 4261 gtttcagttg aactttggtc tctgcg //