LOCUS       KM887949                1990 bp    DNA     circular VRL 12-MAY-2016
DEFINITION  Beak and feather disease virus isolate BFDV_AUS_BDG_2010_326,
            complete genome.
ACCESSION   KM887949
VERSION     KM887949.1
KEYWORDS    .
SOURCE      Beak and feather disease virus
  ORGANISM  Beak and feather disease virus
            Viruses; ssDNA viruses; Circoviridae; Circovirus.
REFERENCE   1  (bases 1 to 1990)
  AUTHORS   Das,S., Sarker,S., Peters,A., Ghorashi,S.A., Phalen,D.,
            Forwood,J.K. and Raidal,S.R.
  TITLE     Evolution of circoviruses in lorikeets lags behind its hosts
  JOURNAL   Mol. Phylogenet. Evol. 100, 281-291 (2016)
   PUBMED   27118178
  REMARK    Publication Status: Available-Online prior to print
REFERENCE   2  (bases 1 to 1990)
  AUTHORS   Das,S., Sarker,S., Ghorashi,S.A., Forwood,J.K. and Raidal,S.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-OCT-2014) School of Animal and Veterinary Sciences,
            Charles Sturt University, SAVS Building 294 CSU Locked Bag, Wagga
            Wagga, NSW 2678, Australia
COMMENT     ##Assembly-Data-START## Sequencing Technology :: Sanger dideoxy
            sequencing ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1990
                     /mol_type="genomic DNA"
                     /country="Australia"
                     /isolation_source="blood"
                     /collection_date="2010"
                     /host="Melopsittacus undulatus"
                     /note="genotype: BFDV-BDG"
                     /db_xref="taxon:77856"
                     /isolate="BFDV_AUS_BDG_2010_326"
                     /organism="Beak and feather disease virus"
     CDS             131..997
                     /codon_start=1
                     /protein_id="AKO63072.1"
                     /translation="MPSKEGSGCRRWCFTLNNPTDGEIEFVRTLGPDEFYYAIVGREK
                     GEQGTPHLQGYFHFRNKKRLSALKKMLPRAHFERAKGSDADNEKYCSKEGDVILTLGI
                     VARDGHRAFDGAVAAVMSGRKMKEVAREFPDIYVRHGRGLHNLSLLVGSRPRDFKTEV
                     DVMYGPPGCGKSKWANEQPGTKYYKMRGEWWDGYDGEDVVILDDFYGWLPYCEMLRLC
                     DRYPHKVPVKGAFVEFTSKRIIITSNKAPETWYKEDCDPKPLFRRFTRVWWYTDKLEQ
                     VRPDFLAHPINF"
                     /product="replication-associated protein"
                     /note="Rep"
     CDS             complement(1233..1979)
                     /codon_start=1
                     /protein_id="AKO63073.1"
                     /translation="MWGTSNCACAIFQIRRRYARPYYRRRHIRRYRRRRRYFRRRRFT
                     TNRIYTLRLKRQFKFEIRANTTSPGNVIWNSDYITFTLSDFITNTPNPQNLNFEDYRI
                     KLAKMEMRPTWGHYSISSEGFGHTAVIQDSRITKFKTTADQQQDPVAPFDGARKWYLA
                     KGFKRLLRPKPQITIEDLSTANQSAALWLNSTRTGWIPLQGGPNQAGVNVKHYGLAFS
                     FPQPKLAITYECQLTLYVQFRQFAPNNPST"
                     /product="capsid protein"
                     /note="capsid"
ORIGIN      
        1 tattacccgc cgcctggggc accggggcac cgcagctatt ggctgctgtg ccgaggtgcc
       61 ccgcccttag ggaggagtaa atggcgccgt taaacggtgc cgtaatttcc ggaggatcac
      121 actcgccatc atgccgtcca aggagggctc tggctgtcgc cgttggtgct tcacccttaa
      181 caaccctaca gacggcgaga tcgaattcgt ccgtactctc ggtcctgacg aattctacta
      241 tgccatcgtt ggacgggaaa agggcgagca aggtaccccc catttgcagg gctactttca
      301 ttttagaaat aagaagcgac tgagcgctct taagaaaatg ctgccgcgag ctcattttga
      361 gcgcgctaaa gggagcgatg cggataatga gaagtattgc agtaaagagg gggacgttat
      421 acttaccctg ggcattgtgg cgagagacgg tcaccgcgct ttcgacggag ctgttgctgc
      481 cgtgatgtcc ggacgcaaaa tgaaggaagt cgcgcgagag ttcccagata tctacgtcag
      541 gcatgggcgg ggcttgcata acctctcgct attggttggt tcccgcccac gtgatttcaa
      601 gacggaggtt gacgtcatgt acgggccccc tgggtgtggc aagagtaaat gggccaatga
      661 gcagccgggg actaaatatt ataaaatgcg tggtgaatgg tgggatggat atgatgggga
      721 agatgtcgtc atcttggacg acttctatgg gtggctccct tattgcgaga tgctccgcct
      781 ctgcgaccgt tacccacata aagtgccagt taagggcgca tttgtggagt ttaccagcaa
      841 gaggatcatt attacgagca ataaggcccc cgagacctgg tacaaggagg actgtgaccc
      901 gaagccactg ttccggagat tcacccgtgt ttggtggtac actgacaagt tggaacaagt
      961 ccggcctgat ttcctcgccc accccatcaa tttttgatac cccccggagg ttattaataa
     1021 aagccggccg tcgggccgaa ggcccgatgg cgcagggcgg gacgccctgc cggagggctc
     1081 gcagggccgt caggcccgag agcccgacca gcccggaggg cctagtctgt gtccgggggg
     1141 ggggccccgg ggggtccccc cgacacgacg agaatggtag cgccgaaggc gccaataaac
     1201 actcgaaaag gtatttgccg tttgtgtctt tattaagtac tgggattatt gggggcaaac
     1261 tgacggaatt gaacatacag agtgagctgg cattcataag tgatcgctaa ttttggctga
     1321 gggaagctga aggcaaggcc gtagtgcttg acgttcaccc ctgcctggtt gggtcctcct
     1381 tgtagtggga tccagccggt tctggtgctg ttgagccaca atgccgcaga ctggttcgct
     1441 gtgctcaggt cttctatcgt tatttgtggt tttggtctta ggaggcgttt gaatcctttg
     1501 gctaaatacc actttctggc accgtcgaaa ggtgccactg ggtcttgttg ttggtctgca
     1561 gtagttttaa atttagtgat tctggagtct tggatcactg ccgtgtggcc gaatccctct
     1621 gaagaaatgg agtagtgacc ccatgtgggt ctcatttcca ttttagctaa ctttattcgg
     1681 tagtcttcga aattaagatt ttgtgggttt ggtgtgttag ttatgaagtc tgacaatgta
     1741 aaggttatgt agtcagaatt ccaaattaca ttgccaggac tagtggtgtt tgctcgaatt
     1801 tcaaatttga attggcgttt gagtctgaga gtgtaaattc tattggttgt gaaacggcgt
     1861 ctgcggaagt atctacgtcg acggcggtat cgccggatgt gacgtctgcg gtagtatggg
     1921 cgggcatatc ttcgcctaat ctgaaatata gcgcatgcgc agttagaggt gccccacagg
     1981 cggcggttag
//