LOCUS       KF385435                1996 bp    DNA     circular VRL 08-JUL-2014
DEFINITION  Beak and feather disease virus isolate BFDV_AUS_Galah_04_298,
            complete genome.
ACCESSION   KF385435
VERSION     KF385435.1
KEYWORDS    .
SOURCE      Beak and feather disease virus
  ORGANISM  Beak and feather disease virus
            Viruses; ssDNA viruses; Circoviridae; Circovirus.
REFERENCE   1  (bases 1 to 1996)
  AUTHORS   Sarker,S., Ghorashi,S.A., Forwood,J.K., Bent,S.J., Peters,A. and
            Raidal,S.R.
  TITLE     Phylogeny of beak and feather disease virus in cockatoos
            demonstrates host generalism and multiple-variant infections
            within Psittaciformes
  JOURNAL   Virology 460-461, 72-82 (2014)
   PUBMED   25010272
REFERENCE   2  (bases 1 to 1996)
  AUTHORS   Sarker,S., Ghorashi,S.A., Forwood,J.K. and Raidal,S.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-JUL-2013) School of Animal and Veterinary Sciences,
            Charles Sturt University, Locked Bag 588, Boorooma street, Wagga
            Wagga, NSW 2650, Australia
COMMENT     ##Assembly-Data-START## Sequencing Technology :: Sanger dideoxy
            sequencing ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1996
                     /mol_type="genomic DNA"
                     /country="Australia"
                     /isolation_source="blood"
                     /collection_date="2004"
                     /host="Eolophus roseicapillus"
                     /note="genotype: BFDV-G"
                     /db_xref="taxon:77856"
                     /isolate="BFDV_AUS_Galah_04_298"
                     /organism="Beak and feather disease virus"
     gene            135..1004
                     /gene="Rep"
     CDS             135..1004
                     /codon_start=1
                     /protein_id="AHX56454.1"
                     /gene="Rep"
                     /translation="MPSKEGSGCRRWCFTLNNPTDGEIEFVRSLEPDEFYYAIVGREK
                     GEQGTPHLQGYFHFKNKKRLSALKKLLPRAHFERAKGSDADNEKYCSKEGDVILTLGI
                     VARDGHRAFDGAVAAVMSGRKMKEVAREFPEVYVRHGRGLHNLSLLVGSRPRDFKTEV
                     DVIYGPPGCGKSRWANEQPGTKYYKMRGEWWDGYDGEDVVILDDFYGWLPYCEMLRLC
                     DRYPHKVPVKGAFVEFTSKRIIITSNKPPETWYKEDCDPKPLFRRFTRVWWYNVDKLE
                     QVRPDFLAHPINY"
                     /product="putative replication-associated protein"
     gene            complement(1239..1985)
                     /gene="Cap"
     CDS             complement(1239..1985)
                     /codon_start=1
                     /protein_id="AHX56455.1"
                     /gene="Cap"
                     /translation="MWGTSNCACATFQQRRRYARPQYRRRHIRRYRRRRRHFRRRRFS
                     TNRIYTLRLTRQFQFKINKQTTSVGNLIFNADYITFALDDFLQAVPNPHALNFEDYRI
                     KLAKIEMRPTGGHYTVQSDGFGHTAVIQDSRITRFKTTADQTQDPLAPFDGAKKWFVS
                     RGFKRLLRPKPQITIEDLTTANQSAALWLNSARTGWIPLQGGPNAAGTKVRHYGIAFS
                     FPQPEQTITYVTKLTLYVQFRQFAPNNPST"
                     /product="putative capsid protein"
ORIGIN      
        1 tattacccgc cgcctggggc accggggcac cgcagccatt ggctgccttg ccgaggtgcc
       61 cgcccctagg gaggagtaaa tggcggcgtt atacgccgcc gtaatctccg gaggatcaca
      121 cccgcccggg aaccatgccg tccaaggagg gctccggctg tcgccgttgg tgtttcaccc
      181 ttaacaaccc tacagacggc gagatcgaat tcgtccgttc tctggagcct gacgaattct
      241 actatgccat cgttggacgg gaaaagggtg agcagggcac cccccatttg caaggctact
      301 ttcattttaa aaataagaag cgactgagcg cgcttaagaa actgctgccc cgagcgcatt
      361 ttgagcgcgc taaagggagc gatgcggata atgagaagta ttgcagtaaa gagggggacg
      421 ttatacttac cctgggcatt gtggcgagag acggtcaccg cgcgttcgat ggagctgttg
      481 ctgccgtgat gtccggacgc aaaatgaagg aagtcgcgcg agagttccca gaagtctacg
      541 taaggcatgg gcggggccta cataaccttt cgctattggt tggttcccgc ccacgtgact
      601 tcaagactga ggttgacgtc atctacggcc caccggggtg tggcaagagt agatgggcca
      661 atgagcagcc tgggactaaa tattataaaa tgcgcggtga atggtgggat ggatatgacg
      721 gggaagatgt cgtcatcttg gacgactttt atgggtggct accttattgc gagatgctcc
      781 gcctctgcga ccgttaccca cataaagtgc cagttaaggg cgcttttgtg gagtttacca
      841 gcaagaggat cattatcacg agcaataagc cccccgagac ttggtacaag gaggactgtg
      901 acccgaagcc attgttccgg agattcacac gtgtttggtg gtacaacgtg gacaagttgg
      961 aacaagtccg gcctgacttc ctcgcccacc ccatcaatta ctgatagtct cggtgatgtt
     1021 ttcataaagc taggcgtcgg gccgaaggcc cgatgccgca gggggggacc ccctgccgga
     1081 gggctcgcag ggccgtcagg cccgagagac cgaccagccc ggagggccca gtcagtgtcg
     1141 gggggggggc cccggggggt ccccccgaca cgacgagcac ggtcagcgcc gaaggcgcca
     1201 ataaacactc gaaacggtat ttgttgtctg agtctttatt aagtactggg attgttaggg
     1261 gcaaactgac ggaattgaac atacaaagta agcttggtca cataagtgat cgtttgctct
     1321 ggctggggga agctgaaggc aatgccgtag tgccggactt ttgttcccgc tgcgttgggt
     1381 cctccttgta gtgggatcca gccggtcctg gcgctgttta gccacaatgc tgcagactgg
     1441 tttgcagtgg tcaggtcctc tatcgttatt tgaggtttcg gtctgaggag gcgtttgaat
     1501 cccctgctaa caaaccattt tttggcaccg tcgaaaggtg ccagggggtc ttgtgtttgg
     1561 tctgcagtag ttttaaatct agttattctg gagtcttgga ttacggccgt gtggccgaat
     1621 ccgtctgact gtacggtgta gtggccccct gtgggcctca tttctatttt agctaattta
     1681 attcggtagt cttcgaaatt cagtgcgtgt gggtttggga cggcttgtag gaagtcgtcc
     1741 aacgcaaagg ttatgtagtc ggcattaaaa attaggttgc caacactggt ggtttgtttg
     1801 ttaattttga attggaattg gcgggtgagt ctgagagtgt aaattctatt ggttgagaac
     1861 cggcgtctgc ggaagtgcct acgtcgccgg cggtatcgcc tgatgtgacg tctgcggtat
     1921 tgtgggcggg catatcttct tctctgctga aatgtagcgc atgcgcagtt agaggtgccc
     1981 cacaggcggc ggttag
//