LOCUS       KF385423                1993 bp    DNA     circular VRL 08-JUL-2014
DEFINITION  Beak and feather disease virus isolate BFDV_AUS_LBC_LBC10,
            complete genome.
ACCESSION   KF385423
VERSION     KF385423.1
KEYWORDS    .
SOURCE      Beak and feather disease virus
  ORGANISM  Beak and feather disease virus
            Viruses; ssDNA viruses; Circoviridae; Circovirus.
REFERENCE   1  (bases 1 to 1993)
  AUTHORS   Sarker,S., Ghorashi,S.A., Forwood,J.K., Bent,S.J., Peters,A. and
            Raidal,S.R.
  TITLE     Phylogeny of beak and feather disease virus in cockatoos
            demonstrates host generalism and multiple-variant infections
            within Psittaciformes
  JOURNAL   Virology 460-461, 72-82 (2014)
   PUBMED   25010272
REFERENCE   2  (bases 1 to 1993)
  AUTHORS   Sarker,S., Ghorashi,S.A., Forwood,J.K. and Raidal,S.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-JUL-2013) School of Animal and Veterinary Sciences,
            Charles Sturt University, Locked Bag 588, Boorooma street, Wagga
            Wagga, NSW 2650, Australia
COMMENT     ##Assembly-Data-START## Sequencing Technology :: Sanger dideoxy
            sequencing ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1993
                     /mol_type="genomic DNA"
                     /country="Australia"
                     /isolation_source="feather; liver"
                     /collection_date="2010"
                     /host="Cacatua tenuirostris"
                     /note="genotype: BFDV-LBC"
                     /db_xref="taxon:77856"
                     /isolate="BFDV_AUS_LBC_LBC10"
                     /organism="Beak and feather disease virus"
     gene            135..1004
                     /gene="Rep"
     CDS             135..1004
                     /codon_start=1
                     /protein_id="AHX56430.1"
                     /gene="Rep"
                     /translation="MPSKEGSGCRRWCFTLNNPTDGEIEFVRSLGPDEFYYAIVGREK
                     GEQGTPHLQGYFHFKNKKRLSALKKLLPRAHFERAKGSDADNEKYCSKEGDVILTLGI
                     VARDGHRAFDGAVAAVMSGRKMKEVAREFPEVYVRHGRGLHNLSLLVGSHPRDFKTEV
                     DVIYGPPGCGKSRWANEQPGTKYYKMRGEWWDGYDGEDVVILDDFYGWLPYCEMLRLC
                     DRYPHKVPVKGAFVEFTSKRIIITSNKPPETWYKEDCDPKPLFRRFTRVWWYNVDKLE
                     QVRPDFLAHPINY"
                     /product="putative replication-associated protein"
     gene            complement(1239..1982)
                     /gene="Cap"
     CDS             complement(1239..1982)
                     /codon_start=1
                     /protein_id="AHX56431.1"
                     /gene="Cap"
                     /translation="MWGTSHCACANFQVRRRYARPYRRRHIRRYRRRRRHFRRRRFTT
                     NRVYTLRFKREFKFTIQKQTTATGTMIWNSDYVTFSLSDFLGTGPNPQSLNFEDYRIR
                     LAKIEMRPTYGYSYTNSEGFGHTAIIQDSRISKFKTTADQTQDPLAPFDGSKKWYLHR
                     GFKRLLRPKPQITINDLAAANQSAALWLNSARTGWIPLQGGPNLAGAKVRHYGLAFSF
                     PQPNVPINYQTILTIYVQFRQFTPNNPST"
                     /product="putative capsid protein"
ORIGIN      
        1 tattacccgc cgcctggggc accggggcac cgcagctatt ggctgctttg ccgaggtgcc
       61 cgcccctagg gaggagtaaa tggcggcgtt atacgccgcc gtaatctccg gaggatcaca
      121 cccgcccggg aaccatgccg tccaaggagg gctccggctg tcgccgctgg tgctttaccc
      181 ttaacaaccc tacagacggc gagatcgaat tcgtccgttc cctggggcct gacgaattct
      241 actatgccat cgttggacgg gaaaaaggcg agcaaggtac cccccatttg caaggctact
      301 ttcattttaa aaataagaag cgactgagcg cgcttaagaa actgctgccg cgagcccatt
      361 ttgagcgcgc taaagggagc gatgcggata atgagaagta ttgcagtaaa gagggggacg
      421 ttatacttac cctgggcatt gtggcgagag atggtcaccg cgctttcgac ggagctgttg
      481 ctgccgtgat gtccggacgc aaaatgaagg aagtcgcgcg agagttccca gaagtctacg
      541 taagacatgg gcggggctta cataacctct cgctattggt cggttcccac ccacgtgact
      601 tcaagactga ggttgacgtc atctacgggc caccggggtg tggcaagagt agatgggcca
      661 atgagcagcc tgggactaaa tattataaaa tgcgcggtga atggtgggac ggatatgatg
      721 gggaagatgt cgtcatcttg gacgactttt atgggtggct accttattgc gagatgctcc
      781 gcctctgtga ccgttaccca cataaagtgc cagttaaagg cgcttttgtg gagtttacga
      841 gcaagaggat cattattacg agcaataagc cccccgagac ttggtacaag gaggactgtg
      901 acccgaagcc actgttccgg agattcacac gtgtctggtg gtacaacgtg gacaagttgg
      961 aacaagtccg gcctgacttc cttgcccatc ccatcaatta ttgatagtct cggtgatgtt
     1021 ttcataaagc taggcgtcgg gccgaaggcc cgatgccgca gggggggacc ccctgccgga
     1081 ggggtcgcag ggccgtcagg cccgagaccc cgaccagccc ggagggcgta gtcagtgtcg
     1141 gggggggggc cccggggggt ccccccgaca cgacgaacac ggtcagcgcc gaaggcgcca
     1201 ataaacactc gaaaaggtat ttgctgtctg agtctttatt aagtgctggg attgttaggg
     1261 gtaaactgac ggaattgaac atatatggtg agaatggttt gataattgat gggtacattt
     1321 ggctgaggga agctgaatgc aaggccgtag tgcctgacct tcgcccctgc taagttgggt
     1381 cctccttgta gtgggatcca gccggtcctg gcgctgttta gccacaatgc tgcagactgg
     1441 ttcgctgcgg cgaggtcgtt gattgttatt tgtggcttag gtctgaggag gcgcttgaat
     1501 cccctgtgaa gataccattt tttggaaccg tcgaaaggtg ccagcgggtc ttgtgtttgg
     1561 tccgcggtag tcttaaattt acttatcctg gagtcttgga ttatggccgt gtggccaaat
     1621 ccttctgaat tagtgtagga gtagccatat gtgggcctca tttcaatttt agctaaccta
     1681 atccggtagt cttcgaaatt cagtgattga gggtttggtc ctgtgcctag gaagtctgac
     1741 aacgaaaagg ttacgtagtc agagttccaa atcatggtac cagtagcggt ggtttgtttc
     1801 tgaatagtga atttgaattc gcgtttgaat ctgagagtgt aaactctatt ggttgtgaaa
     1861 cggcgtctgc ggaagtgtct acgtcgccgg cggtatcgcc tgatgtgacg tctgcggtat
     1921 gggcgggcat atcgtcgtct aacctgaaag ttagcgcatg cgcagtgaga ggtgccccac
     1981 aggcggcggt tag
//