LOCUS       KF385427                1993 bp    DNA     circular VRL 08-JUL-2014
DEFINITION  Beak and feather disease virus isolate BFDV_AUS_LBC_LBC51,
            complete genome.
ACCESSION   KF385427
VERSION     KF385427.1
KEYWORDS    .
SOURCE      Beak and feather disease virus
  ORGANISM  Beak and feather disease virus
            Viruses; ssDNA viruses; Circoviridae; Circovirus.
REFERENCE   1  (bases 1 to 1993)
  AUTHORS   Sarker,S., Ghorashi,S.A., Forwood,J.K., Bent,S.J., Peters,A. and
            Raidal,S.R.
  TITLE     Phylogeny of beak and feather disease virus in cockatoos
            demonstrates host generalism and multiple-variant infections
            within Psittaciformes
  JOURNAL   Virology 460-461, 72-82 (2014)
   PUBMED   25010272
REFERENCE   2  (bases 1 to 1993)
  AUTHORS   Sarker,S., Ghorashi,S.A., Forwood,J.K. and Raidal,S.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-JUL-2013) School of Animal and Veterinary Sciences,
            Charles Sturt University, Locked Bag 588, Boorooma street, Wagga
            Wagga, NSW 2650, Australia
COMMENT     ##Assembly-Data-START## Sequencing Technology :: Sanger dideoxy
            sequencing ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1993
                     /mol_type="genomic DNA"
                     /country="Australia"
                     /isolation_source="feather; liver"
                     /collection_date="2010"
                     /host="Cacatua tenuirostris"
                     /note="genotype: BFDV-LBC"
                     /db_xref="taxon:77856"
                     /isolate="BFDV_AUS_LBC_LBC51"
                     /organism="Beak and feather disease virus"
     gene            135..1004
                     /gene="Rep"
     CDS             135..1004
                     /codon_start=1
                     /protein_id="AHX56438.1"
                     /gene="Rep"
                     /translation="MPSKEGSGCRRWCFTLNNPTDGEIEFVRSLGPDEFYYAIVGREK
                     GEQGTPHLQGYFHFKNKKRLSALKKLLPRAHFERAKGSDADNEQYCSKEGDVILTLGI
                     VARDGHRAFDGAVAAVMSGRKMKEVAREFPEVYVRHGRGLHNLSLLVGSHPRDFKTEV
                     DVIYGPPGCGKSRWANEQPGTKYYKMRGEWWDGYDGEDVVILDDFYGWLPYCEMLRLC
                     DRYPHKVPVKGAFVEFTSKRIIITSNKPPETWYKEDCDPKPLFRRFTRVWWYNVDKLE
                     QVRADFLAHPINY"
                     /product="putative replication-associated protein"
     gene            complement(1239..1982)
                     /gene="Cap"
     CDS             complement(1239..1982)
                     /codon_start=1
                     /protein_id="AHX56439.1"
                     /gene="Cap"
                     /translation="MWGTSNCACATFQIRRRYARPYRRRHIRRYRRRRRHFRRRRFST
                     NRIYTLRLTRQFQFKINKQTTSVGNLIFNADYITFALDDFLQAVPNPHTLNFEDYRIK
                     LAKMEMRPTGGHYTVQSDGFGHTAVIQDSRITRFKTTADQTQDPLAPFDGAKKWFVSR
                     GFKRLLRPKPQITIEDLTTANQSAALWLNSARTGWIPLQGGPNSAGTKVRHYGIAFSF
                     PQPEQTITYVTKLTLYVQFRQFAPNNPST"
                     /product="putative capsid protein"
ORIGIN      
        1 tattacccgc cgcctggggc accggggcac cgcagctatt ggctgctctg ccgaggtgcc
       61 cgcccctagg gaggagtaaa tggcggcgtt atacgccgcc gtaatctccg gaggatcaca
      121 cccgcccggg aaccatgccg tccaaggagg gctccggctg tcgccgttgg tgtttcaccc
      181 ttaacaaccc tacagacggc gagatcgaat tcgtccgttc ccttgggcct gacgaattct
      241 actatgccat cgttggacgc gaaaagggtg agcaaggcac tccccatttg caaggctact
      301 ttcattttaa aaataagaag cgactgagcg cgcttaagaa actgctgccg cgagcccatt
      361 ttgagcgcgc taaagggagc gatgcggata atgaacagta ttgcagtaaa gagggggacg
      421 ttatacttac cctgggcatt gtggcgagag acggtcaccg cgctttcgac ggagctgttg
      481 ctgccgtgat gtccggacgc aaaatgaagg aagtcgcgcg agagttccca gaagtctacg
      541 taagacatgg gcggggctta cataatctgt cgctattggt cggttcacac ccacgtgact
      601 tcaaaactga ggttgacgtc atctacgggc caccggggtg tggcaagagt agatgggcca
      661 atgagcagcc tgggaccaaa tattataaaa tgcgcggtga atggtgggat ggatatgatg
      721 gggaagatgt cgtcatcttg gacgactttt atgggtggct accttattgc gagatgctcc
      781 gcctctgtga ccgttaccca cataaagtgc cagttaaagg cgcttttgtg gagtttacca
      841 gcaagaggat cattatcacg agcaataagc cccccgagac ttggtacaag gaggactgtg
      901 acccgaagcc actgttccgg agattcacac gtgtctggtg gtacaatgtg gacaagttgg
      961 aacaagtccg ggccgacttc ctcgcccacc ccatcaatta ttgatagtct cggtgatgtt
     1021 ttcataaagc taggcgtcgg gccgaaggcc cgatgccgca gggggggacc ccctgccgga
     1081 gggctcgcag ggccgtcagg cccgagagac cgaccagccc gaagggcgta gtcagtgtcg
     1141 gggggggggc cccggggggt ccccccgaca cgacgaacac ggtcagcgcc gaaggcgcca
     1201 ataaacactc gaaacggtat atgttgtctg agtctttatt aagtgctggg attgttaggg
     1261 gcaaactgac ggaattgaac atacaaagtg agcttggtca cataagtgat cgtttgttct
     1321 ggctggggga agctgaatgc aatgccgtag tgccggactt tcgttcccgc tgagttgggt
     1381 cctccttgta gtgggatcca gccggttctc gcgctgttta gccacaatgc cgcagactgg
     1441 ttcgctgtgg tcaggtcctc tatcgttatt tgtggtttgg gtctgaggag gcgtttgaat
     1501 cccctgctaa caaaccattt cttggcaccg tcgaaaggtg ccagagggtc ttgtgtttgg
     1561 tctgcagtag ttttaaatct agttattctg gagtcttgga ttacggccgt gtggccgaat
     1621 ccgtctgatt gtacggtgta atgtccccct gtgggcctca tttccatttt agctaactta
     1681 attcggtaat cttcaaaatt gagtgtgtgt gggtttggga cggcttgtag gaagtcgtcc
     1741 aatgcaaagg taatgtagtc agcattaaaa attaggttgc caacactggt ggtttgtttg
     1801 ttaattttga attggaattg gcgcgtgagt ctgagagtgt aaattctatt ggttgagaaa
     1861 cggcgtctgc ggaagtgcct acgtcgccgg cggtatcgcc tgatgtgacg tcggcggtat
     1921 gggcgggcat atcttcgtct aatctgaaat gtagcgcatg cgcagttaga ggtgccccac
     1981 aggcggcggt tag
//