LOCUS       JX221023                2004 bp    ss-DNA  circular VRL 23-APR-2013
DEFINITION  Beak and feather disease virus isolate BFDV-T_PL-410_2007,
            complete genome.
ACCESSION   JX221023
VERSION     JX221023.1
KEYWORDS    .
SOURCE      Beak and feather disease virus
  ORGANISM  Beak and feather disease virus
            Viruses; ssDNA viruses; Circoviridae; Circovirus.
REFERENCE   1  (bases 1 to 2004)
  AUTHORS   Julian,L., Piasecki,T., Chrzastek,K., Walters,M., Muhire,B.,
            Harkins,G.W., Martin,D.P. and Varsani,A.
  TITLE     Extensive recombination detected among beak and feather disease
            virus isolates from breeding facilities in Poland
  JOURNAL   J. Gen. Virol. 94 (PT 5), 1086-1095 (2013)
   PUBMED   23324468
REFERENCE   2  (bases 1 to 2004)
  AUTHORS   Varsani,A., Julian,L., Piasecki,T. and Chrzastek,K.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-JUN-2012) School of Biological Sciences, University
            of Canterbury, Private Bag 4800, Christchurch, Canterbury 8014,
            New Zealand
COMMENT     ##Assembly-Data-START## Assembly Method :: DNAMAN v. 5.26
            Sequencing Technology :: Sanger dideoxy sequencing
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..2004
                     /mol_type="genomic DNA"
                     /country="Poland"
                     /collection_date="22-Aug-2007"
                     /host="Psittacus erithacus"
                     /note="genotype: T1"
                     /db_xref="taxon:77856"
                     /isolate="BFDV-T_PL-410_2007"
                     /organism="Beak and feather disease virus"
     CDS             140..1009
                     /codon_start=1
                     /protein_id="AGC55194.1"
                     /translation="MPSKEGSGCRRWCFTLNNPTDGEIEFVCSLESDEFHYAIVGREK
                     GEQGTPHLQGYFHFKNKKRLSALKKMLPRAHFERAKGSDADNEKYCSKEGDVILTLGI
                     VARDGHRAFDGAVAAVMSGRKMKEVAREFPDIYVRHGRGLHNLSLLVGSRPRDFKTEV
                     DVIYGPPGCGKSRWANEQPGTKYYKMRGEWWDGYDGEEVVVLDDFYGWLPYCEMLRLC
                     DRYPHKVPVKGAFVEFTSKRIIITSNKSPENWYKEDCDPKPLFRRFTRVWWWHIDKLE
                     QVRADFLAHPINY"
                     /product="replication associated protein"
     CDS             complement(1243..1980)
                     /codon_start=1
                     /protein_id="AGC55195.1"
                     /translation="MNCACAKFQIRRRRYARPYYRRRHIRRYRRRRRYFRRRRFSTNR
                     IYTLRLKRQFKFDILKQTTSAGQIIWNSDYITFSLSDFLATAPNPHTLNFEDYRIKLA
                     KMELRPTWGHYTISADGFGHTAVIQDSRITKFKTFTDQTQDPLAPFDGARKWYLSRGF
                     KRLLRPKPQITIDDLTTANQSAALWLNSARTGWIPLQGGPNAAGANVRHYGLAFSFPQ
                     PEVKISYVCELTLYVQFRQFAPNNPST"
                     /product="capsid protein"
                     /transl_except=(pos:complement(1978..1980),aa:Met)
ORIGIN      
        1 tattacccgc cgcctggggc accggggcac cgcagccatt ggctgcggtg ccccgtggcc
       61 ctcccactat ccctccccct agggtggagc aaatggcgcc gttatacggc gccgcaatct
      121 ccggaggatc acactcgcca tgccgtccaa ggagggctcc ggctgtcgcc gttggtgttt
      181 caccctcaac aaccctacag acggcgagat cgaattcgtg tgttcgctcg agtctgacga
      241 attccactat gccatcgttg gacgggaaaa aggcgagcaa ggtacccccc atttgcaagg
      301 ctactttcat tttaaaaata agaagcgact gagcgcgctt aagaaaatgc tgccgcgagc
      361 tcattttgag cgcgctaaag ggagcgacgc ggacaatgag aagtattgca gcaaagaggg
      421 ggacgtgata cttaccctgg gcattgtggc gagagacggt caccgcgctt tcgacggagc
      481 tgttgctgcc gtgatgtccg gacgcaaaat gaaggaagtc gcgcgagagt tcccagatat
      541 ctacgtcagg catgggcggg gcttgcataa cctctcgcta ttggttggtt cccgcccacg
      601 tgatttcaag actgaggttg acgtcatcta cggcccaccg gggtgtggca agagtagatg
      661 ggccaatgag cagcctggga ctaaatatta taaaatgcgg ggtgaatggt gggatggcta
      721 tgatggggaa gaagtcgtcg tattggacga cttctatggg tggctaccct attgcgagat
      781 gctccgcctc tgcgaccgtt acccacataa ggtgccagtt aagggcgcct ttgtggagtt
      841 tacgagcaag aggatcatta tcacgagcaa taagtccccc gagaactggt acaaggagga
      901 ctgtgacccg aagccactct tcaggagatt cacgcgtgta tggtggtggc acattgacaa
      961 gttggaacaa gtccgggcag atttcctcgc ccaccccatc aattattgat cgactcggtg
     1021 atgattaaaa aaagtcgggc gtcaggccga aggcctgatg ccgcagggcg ggacgccctg
     1081 ccggagggct cgcagggccg tcaggcccga gagaccgacc agcccggagg gcctcgtctg
     1141 tgtcgggggg gggccccggg gggtcccccc gacacgacca acacggtcag cgccgaaggc
     1201 gccaataaac actcgaaaag gtatttgctg tgtgagtctt tattaagtac tgggattgtt
     1261 gggggcaaat tgacggaatt gaacatacaa agtcagctca catacataag agatctttac
     1321 ttctggctga gggaagctga aggcaaggcc gtagtgtctg acgttcgctc ctgccgcgtt
     1381 gggtcctcct tgtagtggga tccagccggt tctggcgctg ttcagccaca atgccgcaga
     1441 ctggttcgca gtggtcaggt catctattgt tatctgtggt tttggtctga ggaggcgttt
     1501 gaatcccctg ctgagatacc atttcctggc accgtcgaaa ggtgccagcg ggtcttgtgt
     1561 ctggtcagta aaagttttaa atttagttat tctggaatct tggattacgg ctgtgtggcc
     1621 gaatccgtct gcactaatgg tgtagtggcc ccatgtgggt ctcaattcca ttttagctaa
     1681 tttaattcgg tagtcttcga aattcagtgt atgtggattt ggcgctgttg ctaggaagtc
     1741 tgacaatgaa aaggttatgt agtcagaatt ccaaattatt tggccagcgc tagtggtttg
     1801 tttcaaaatg tcgaatttga attggcgttt gagtctgaga gtgtaaattc tattggttga
     1861 gaaacggcgt ctgcggaagt atctacgtcg cctgcggtat cgcctgatgt gacgtcggcg
     1921 gtagtatggg cgggcatatc tacgtcgtct aatctgaaat ttagcgcatg cgcagttaga
     1981 ggtgccccaa caggcggcgg ttag
//