LOCUS       DQ397818                1987 bp    DNA     circular VRL 01-DEC-2006
DEFINITION  Beak and feather disease virus isolate CPA10-ZA, complete genome.
ACCESSION   DQ397818
VERSION     DQ397818.1
KEYWORDS    .
SOURCE      Beak and feather disease virus
  ORGANISM  Beak and feather disease virus
            Viruses; ssDNA viruses; Circoviridae; Circovirus.
REFERENCE   1  (bases 1 to 1987)
  AUTHORS   Heath,L., Rybicki,E. and Williamson,A.
  TITLE     Molecular studies on Beak and feather disease virus
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1987)
  AUTHORS   Heath,L., Rybicki,E. and Williamson,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-FEB-2006) Molecular and Cell Biology, University of
            Cape Town, Private Bag, Rondebosch 7701, South Africa
FEATURES             Location/Qualifiers
     source          1..1987
                     /mol_type="genomic DNA"
                     /db_xref="taxon:77856"
                     /isolate="CPA10-ZA"
                     /organism="Beak and feather disease virus"
     gene            76..993
                     /gene="V1"
     CDS             127..993
                     /codon_start=1
                     /protein_id="ABE03770.1"
                     /gene="V1"
                     /translation="MPSKEGSGCRRWCFTLNNPTDGEIEFVRTLGPDEFYYAIVGREK
                     GEQGTPHLQGYFHFKNKKRLSALKKMLPRAHFERAKGSDAENEKYCSKEGDVVLTLGI
                     VARDGHRAFDGAVAAVMSGRKMKEVAREFPDIYVRHGRGLHNLSLLVGSRPRDFKTEV
                     DVIYGPPGCGKSRWANEQPGTKYYKMRGEWWDGYDGEDVVILDDFYGWLPYCEMLRLC
                     DRYPHKVPVKGAFVEFTSKRIIITSNKPPETWYKEDCDPKPLFRRFTRVWWYTDKLEQ
                     VRPDFLAHPINY"
                     /product="replication-associated protein"
     CDS             complement(1226..1972)
                     /codon_start=1
                     /protein_id="ABE03771.1"
                     /translation="MWGTSNCACATFQIIRRYARPYYRRRHIRRYRRRRRYFRKRRFT
                     TNRIYTIRLRRQFKFQIRKQTTSTGNVIWNSDYITFALADFLSNTPNPQTLNFEDYRI
                     KLAKMEMRPTWGHYRISSDGFGHTAVIQDSRIXKFKTTTDQTQDPVAPFDGAKKWYVS
                     RGFKRLLRPKPQITIDDLTTANQSAALWLNSTRTGWIPLQGGPNAAGAKVKHYGLAFS
                     FPQPEVTITYVCMLTLYVQFRQFAPNNPST"
                     /product="capsid protein"
ORIGIN      
        1 acccgccgcc gggggcaccg gggcaccgca gctattggct gcattgccga ggtgcccgcc
       61 cttagggagg agtatatggc gccgttaggc gccgtaatct ccggaggatc acactcgccc
      121 gtaaccatgc cgtccaagga gggctctggc tgtcgccgtt ggtgtttcac ccttaacaac
      181 cctacagacg gcgagattga attcgtccgt actctcgggc ctgacgaatt ctactatgcc
      241 atcgttggac gggaaaaggg cgagcaaggt accccccatt tgcaaggcta ttttcatttt
      301 aaaaataaga agcgactgag cgcgcttaag aaaatgctgc cgcgagcaca ttttgagcgt
      361 gctaaaggga gcgatgcgga gaacgagaag tattgcagta aagagggaga cgtggtactt
      421 accctgggca ttgtggcgag agacggtcac cgcgctttcg atggagctgt tgctgccgtg
      481 atgtccggac gcaaaatgaa ggaagtcgcg cgagagttcc cagatattta cgtcaggcat
      541 gggcggggct tgcataacct ctcgctattg gttggatccc gcccacgtga cttcaagact
      601 gaggttgacg taatctacgg accaccgggg tgtggcaaga gtagatgggc caatgagcag
      661 cctgggacta agtattataa aatgcgcggt gaatggtggg atggatatga tggggaagat
      721 gtcgtaatct tggacgactt ttatgggtgg ctaccttatt gcgagatgct ccgcctctgc
      781 gaccgttacc cacacaaggt gccagttaag ggcgcctttg tggagtttac gagcaagagg
      841 ataattatca cgagcaataa gccccccgag acttggtaca aggaggactg tgacccgaag
      901 ccactgtttc ggagattcac tcgtgtttgg tggtacacgg acaagttgga acaagtccgg
      961 cctgacttcc tcgcccaccc catcaattac tgatcgtctc ggtgatgatt aataaagtta
     1021 ggcgtcgggc cgaaggcccg atgccgcagt gggggacccc ctgccggagg gctcgcaggg
     1081 ccgtcaggcc cgagatcccg accagcccgg agggcctcgt ctgtgtcggg gggggggccc
     1141 cgccgggtcc ccccgacacg accaacacgg tagcgccgaa ggcgccaata aacactcgaa
     1201 aatgtatttg gtgtttgagt ctttattaag tgctgggatt gttaggggca aactgacgga
     1261 attgaacata caaagtgagc atgcatacat aagtgatcgt tacttctggc tgagggaagc
     1321 tgaaggcaag gccgtagtgc ttgaccttcg ctcctgctgc gttgggtcct ccttgtagtg
     1381 ggatccagcc ggttctggtg ctgtttagcc acaatgctgc agactggttc gctgtggtca
     1441 ggtcgtctat tgttatttga ggcttcggtc tgaggaggcg tttgaatccc ctgctaacat
     1501 accatttttt ggcaccgtcg aaaggtgcca ctgggtcttg tgtttggtct gtagtagttt
     1561 taaatttant tattctggaa tcttggatta cggccgtgtg gccgaatccg tctgaactaa
     1621 ttctgtagtg gccccatgtg ggcctcattt ccattttagc taacttaatc ctgtagtctt
     1681 cgaaattcag tgtttgtggg tttggtgtgt ttgataggaa gtctgccaat gcaaaggtta
     1741 tgtagtcaga attccaaatt acgttgccag tactggtggt ttgttttcga atttggaatt
     1801 tgaattggcg tctgagtctg atagtgtaaa ttctattggt tgtgaaacgg cgtttgcgga
     1861 agtatctacg tcgccgacgg tatcgcctga tgtgacgtct gcggtagtat gggcgggcat
     1921 atcgtcgtat aatctgaaat gtagcgcatg cgcagttaga ggtgccccac aggcggcggt
     1981 tagtatt
//