LOCUS       KF188690                1993 bp    DNA     circular VRL 16-JAN-2014
DEFINITION  Beak and feather disease virus isolate CS08-482-OBP-TAS-19139,
            complete genome.
ACCESSION   KF188690
VERSION     KF188690.1
KEYWORDS    .
SOURCE      Beak and feather disease virus
  ORGANISM  Beak and feather disease virus
            Viruses; ssDNA viruses; Circoviridae; Circovirus.
REFERENCE   1  (bases 1 to 1993)
  AUTHORS   Sarker,S., Patterson,E.I., Peters,A., Baker,G.B., Forwood,J.K.,
            Ghorashi,S.A., Holdsworth,M., Baker,R., Murray,N. and Raidal,S.R.
  TITLE     Mutability dynamics of an emergent single stranded DNA virus in a
            naive host
  JOURNAL   PLoS ONE 9 (1), E85370 (2014)
   PUBMED   24416396
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1993)
  AUTHORS   Sarker,S., Ghorashi,S.A., Forwood,J.K. and Raidal,S.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2013) School of Animal and Veterinary Sciences,
            Charles Sturt University, Locked Bag 588, Boorooma Street, Wagga
            Wagga, NSW 2650, Australia
COMMENT     ##Assembly-Data-START## Sequencing Technology :: Sanger dideoxy
            sequencing ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1993
                     /mol_type="genomic DNA"
                     /country="Australia"
                     /isolation_source="blood"
                     /host="Orange-bellied parrot"
                     /note="genotype: OBP"
                     /db_xref="taxon:77856"
                     /isolate="CS08-482-OBP-TAS-19139"
                     /organism="Beak and feather disease virus"
     CDS             135..1001
                     /codon_start=1
                     /protein_id="AHC70196.1"
                     /translation="MPSKEGSGCRRWCFTLNNPTDGEIEYVRTLGPDEFYYAIVGREK
                     GEQGTPHLQGYFHFKNKKRLSALKKMLPRGHFERAKGSDADNEKYCSKEGDVILTLGI
                     VARDGHRAFDGAVAAVMSGRKMKEVAREFPDIYVRHGRGLHSLSLLVGSRPRDFKTEV
                     DVIYGPPGCGKSRWANDQAGTKYYKMRGEWWDGYDGEDVVILDDFYGWLPYCEMLRLC
                     DRYPHKVPVKGAFVEFTSKRIIITSNKPPETWYKEDCDPKPLFRRFTRVWWYNGKLEQ
                     VRPDFLAYPINF"
                     /product="putative replication-associated protein"
                     /note="Rep"
     CDS             complement(1236..1982)
                     /codon_start=1
                     /protein_id="AHC70197.1"
                     /translation="MWGTSDCACAIFQIRRRYTRPYYRRRHIRRYRRRRRHFRRRRFT
                     TNRVYTIRLKRQFKFQIQKQTTSTGNVIWNSDYITFTLSDFLTNTPNPPTLNFEDYRI
                     KLAKMEMRPTWGHYTIQSQGFGHTAVIQDYRITKFKTTADQTQDPLAPFDGAKKWYVS
                     RGFKRLLRPKPQITINDLATANQSAALWLNSTRTGWIPLQGGPDGAGASIKHYGLAFS
                     FPQPDETITYVCMLTLYVQFRQFAPNNPST"
                     /product="putative capsid protein"
ORIGIN      
        1 tattacccgc cgcctggggc accggggcac cgcagccatt ggctgctttg ccgaggtgcc
       61 cgcccctagg gaggagaaga cgacgccgtt aggcgtcgtc gtaatctccg gaggatcaaa
      121 ctcgcccggg aaccatgccg tccaaggagg gctctggctg tcgccgttgg tgtttcaccc
      181 ttaacaaccc taccgacggc gagatcgaat acgtccgtac tcttgggcct gacgaattct
      241 actatgccat cgttggacgg gaaaagggcg agcaaggtac cccccatttg caaggctact
      301 tccattttaa aaataagaag cgactgagcg cgcttaagaa aatgctgccg cgaggtcatt
      361 ttgaacgcgc taaagggagc gatgcggata acgagaagta ttgcagtaaa gagggggacg
      421 ttatacttac cctgggcatt gtggcgagag acggtcaccg cgcttttgac ggagctgttg
      481 ctgccgtgat gtccggacgc aaaatgaagg aagtcgcgcg agagttccca gatatctacg
      541 tcaggcatgg gcggggcttg catagccttt cgctattggt cggttcccgc ccacgtgatt
      601 tcaagaccga ggttgacgtc atctacggcc ctccggggtg tggcaagagt agatgggcca
      661 atgatcaggc tgggactaag tattataaaa tgcgcggtga atggtgggat gggtatgatg
      721 gggaagatgt cgtcatcttg gacgactttt atgggtggtt accttattgc gagatgctcc
      781 gcctctgcga ccgttaccca cataaagtgc cggtaaaggg cgcctttgtg gagtttacca
      841 gcaagaggat cattatcacg agcaataagc ccccagagac ctggtacaag gaggactgtg
      901 acccgaagcc actgttccgg agatttactc gtgtttggtg gtacaatggc aagttggaac
      961 aagtccggcc cgatttcctc gcctacccca tcaatttttg atagtctcgg tgatgtttaa
     1021 taaagttagg cgtcgggccg aaggcccgat gccgcagggg gggaccccct gccggagggc
     1081 tcgcagggcc gttaggcccg agagcccgac cagcccggag ggctgtagtc tgtgtcgggg
     1141 ggggggcccc ggggggtccc cccgacacga cgagcacggt agcgccgaag gcgccaaata
     1201 aacactcgaa aaggtatttg ctgtttgagt ctttattaag tgctgggatt gttaggggca
     1261 aactgacgga attgaacata caaagtgagc atgcatacat aagtgatcgt ttcatcaggt
     1321 tgagggaagc tgaaggcaag tccgtagtgc tttatgctcg cccctgctcc gtcgggtcct
     1381 ccttgtagtg ggatccagcc ggttctggtg ctgtttagcc acaatgccgc agactggttc
     1441 gccgtggcca ggtcgtttat tgttatttgt ggtttcggtc tgaggaggcg tttgaatccc
     1501 ctgctaacat accatttttt ggcaccgtcg aaaggtgcca gcgggtcttg tgtttggtct
     1561 gcagtggttt taaatttagt tattctgtag tcttggatta cggccgtgtg gccgaatcct
     1621 tgtgattgaa tggtgtagtg gccccatgtg ggccgcattt ccattttagc taacttaatc
     1681 cggtagtctt cgaaattcag tgttggtggg tttggtgtgt ttgttaggaa gtctgacaat
     1741 gtaaaggtta tgtagtcaga attccaaatt acgttgccag tactggtggt ttgtttttga
     1801 atttggaatt tgaattggcg tttgagtctg atagtgtaaa ctctattggt tgtgaaacgg
     1861 cgtctgcgga agtgtctacg tcgacggcgg tatcgcctga tgtgacgtct gcggtagtat
     1921 ggtcgggtgt atcttcgtct aatctgaaat atagcgcatg cgcagtcaga ggtgccccac
     1981 aggcggcggt tag
//