LOCUS NC_022005 2597 bp DNA circular VRL 20-OCT-2015 DEFINITION Bean chlorotic mosaic virus isolate Venezuela:Rubio 932:2007 segment DNA-A, complete sequence. ACCESSION NC_022005 VERSION NC_022005.1 DBSOURCE BioProject accession PRJNA214690 KEYWORDS RefSeq. SOURCE Bean chlorotic mosaic virus ORGANISM Bean chlorotic mosaic virus Viruses; ssDNA viruses; Geminiviridae; Begomovirus; unclassified Begomovirus. REFERENCE 1 (bases 1 to 2597) AUTHORS Fiallo-Olive,E., Marquez-Martin,B., Hassan,I., Chirinos,D.T., Geraud-Pouey,F., Navas-Castillo,J. and Moriones,E. TITLE Complete genome sequences of two novel begomoviruses infecting common bean in Venezuela JOURNAL Arch. Virol. 158 (3), 723-727 (2013) PUBMED 23178970 REFERENCE 2 (bases 1 to 2597) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (08-AUG-2013) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 2597) AUTHORS Marquez-Martin,B., Fiallo-Olive,E., Chirinos,D., Geraud-Pouey,F., Navas-Castillo,J. and Moriones,E. TITLE Direct Submission JOURNAL Submitted (12-OCT-2011) Fruticultura Subtropical y Fitopatologia, Instituto de Hortofruticultura Subtropical y Mediterranea 'La Mayora', Estacion Experimental La Mayora, Algarrobo-Costa, Malaga 29750, Spain COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to JN848772. COMPLETENESS: full length. FEATURES Location/Qualifiers source 1..2597 /mol_type="genomic DNA" /country="Venezuela" /segment="DNA A" /collection_date="Jul-2007" /host="Phaseolus vulgaris" /db_xref="taxon:1227355" /isolate="Venezuela:Rubio 932:2007" /organism="Bean chlorotic mosaic virus" gene 181..939 /locus_tag="N808_sAgp1" /db_xref="GeneID:16536387" /gene="AV1" CDS 181..936 /locus_tag="N808_sAgp1" /protein_id="YP_008400122.1" /gene="AV1" /db_xref="GeneID:16536387" /codon_start=1 /product="coat protein" /translation="MPKRDLPWRAMPGTSKVSRNANYSPRAGGGSKLSRASEWVNRPM YMKPRIYRTLRTPDVPRGCEGPCKVQSYEQRHDISHVGKVMCISDVTRGNGITHRVGK RFCVKSVYILGKIWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMFDNEPST ATVKNDLRDRYQVMHKFYGKVTGGQYASNEQAIVKRFWKVNNHVVYNHQEAGKYENHT ENALLLYMACTHASNPVYATLKIRIYFYDSIMN" gene complement(933..1331) /locus_tag="N808_sAgp2" /db_xref="GeneID:16536383" /gene="AC3" CDS complement(933..1331) /locus_tag="N808_sAgp2" /protein_id="YP_008400123.1" /gene="AC3" /db_xref="GeneID:16536383" /codon_start=1 /product="replication enhancement protein" /translation="MDSRTGELITAPQAENGVYIWEIENPLYFKLYKVEDPLFTNTRI YSVQIRFNHNLRKALDLHKAYLNFQVWTISLTASGSTYLNRFKRLVHMYLDRLGVISI NNVIRAVRFATDRSYVNYVVEDHSIKFKIY" gene complement(1078..1467) /locus_tag="N808_sAgp3" /db_xref="GeneID:16536384" /gene="AC2" CDS complement(1078..1467) /locus_tag="N808_sAgp3" /protein_id="YP_008400124.1" /gene="AC2" /db_xref="GeneID:16536384" /codon_start=1 /product="transactivator protein" /translation="MRSSSPSTPPSIKKKHREAKKRSVRRRRIDLECGCSIYFHIGCT GHGFTHRGTHHCTSGGEWRVYLGDRKSPLFQTIQGRGPTLHEHQDIQRANTVQPQPQE SIGSPQSLPELPSLDDIPDSFWVDLFE" gene complement(1379..2464) /locus_tag="N808_sAgp4" /db_xref="GeneID:16536385" /gene="AC1" CDS complement(1379..2464) /locus_tag="N808_sAgp4" /protein_id="YP_008400125.1" /gene="AC1" /db_xref="GeneID:16536385" /codon_start=1 /product="replication associated protein" /translation="MPPPKKFRVQSKNYFLTYPQCSLTKEEALSQIQNLATPVNKKFI KICREFHEDGQPHLHVLIQFEGKYQCTNNRFFDLVSPTRSAHFHPNIQGAKSSSDVKS YIDKDGDTVEWGQFQIDGRSARGGQQSANDTYAKALNAGSAEAALQIIKEEQPQHFFL QHHNLVANATRIFQKPPEPWTPPFPLSSFTNVPDEMQEWADDYFGKSPAARPERPLSL IVEGDSRTGKTMWARSLGPHNYLSGHLDFNSRVYSDEVEYNVIDDVAPHYLKLKHWKE LFWAQKKWQSNCKYGKPVVIKGGIPSIVLCNPGEGASYKDFLNKEENTGIRNWTLKNA VFITLDSPLYQEETQGGQEEVSQTTPH" gene complement(2050..2307) /locus_tag="N808_sAgp5" /db_xref="GeneID:16536386" /gene="AC4" CDS complement(2050..2307) /locus_tag="N808_sAgp5" /protein_id="YP_008400126.1" /gene="AC4" /db_xref="GeneID:16536386" /codon_start=1 /product="AC4 protein" /translation="MGNLIYMCSSSSKENTSARITDSSIWSPQPGQHISIRTYRELNQ APTSSPTSTRTEIQLNGDSSRSTADLLEEVSNLLTTHMLKR" ORIGIN 1 accggatggc cgcgcgattt tttctgcccc tccgctttaa ttcgaattaa agcgtgctgc 61 tttcgtttcg tccaatgata ttgcgtctga cgagcttaga tatttgcaac aacttgggcg 121 ctaagttgtt gggtcaagat tataaattaa agcagcacgg cccactgcct ttaactcaaa 181 atgcctaagc gcgatctccc atggcgcgca atgcctggaa catcaaaggt tagtcgcaat 241 gctaactact ctccacgtgc aggtggtggc tcgaaattga gtagggcctc tgagtgggtt 301 aacaggccca tgtatatgaa gcccaggatt tatcggacgc tgaggactcc agatgtgccc 361 agaggctgtg aaggtccttg taaggtccag tcatatgaac agcgtcacga tatttcacat 421 gtcgggaagg tcatgtgtat ctctgatgtc acacgtggca atggcatcac ccaccgtgtg 481 ggtaagcgtt tctgtgttaa gtctgtgtat atccttggta agatctggat ggatgagaat 541 atcaagctga agaaccacac caacagcgtt atgttctggc tggtcaggga ccgtagaccg 601 tatggaacgc ccatggattt cggtcaggta ttcaacatgt tcgacaacga gcccagcact 661 gccacggtca agaacgatct ccgtgatcgt tatcaagtta tgcacaagtt ctatggtaag 721 gtgacaggtg gacagtatgc aagtaacgag caggcaatcg tcaagcgttt ctggaaggtc 781 aacaatcatg tggtctacaa tcatcaagag gctggcaagt atgagaatca cactgagaac 841 gctttgttat tgtatatggc atgtactcat gcctctaatc ctgtttatgc aacgcttaag 901 attcgaatct atttttatga ttcgattatg aattaataaa ttttgaattt tattgaatga 961 tcttccacga cataatttac atacgatctg tctgttgcga aacgaacagc cctaattacg 1021 ttgttaatgg aaataacacc caatcgatct aagtacatat gaactaaacg cttaaatcta 1081 ttcaaataag tcgacccaga agctgtcagg gatatcgtcc agacttggaa gttcaggtag 1141 gctttgtgga gatccaatgc tttcctgagg ttgtggttga accgtatttg cacgctgtat 1201 atcctggtgt tcgtgaagag tgggtcctct accttgtata gtttgaaata aaggggattt 1261 tctatctccc agatatacac gccattctcc gcctgaggtg cagtgatgag ttcccctgtg 1321 cgtgaatcca tgtcctgtgc agcctatgtg gaagtatatg gagcaaccgc actccagatc 1381 aatgcggcgt cgtctgactg acctcttctt ggcctccctg tgtttcttct tgatagaggg 1441 gggagtcgag ggtgatgaag accgcattct tcagggtcca gttcctgatg cctgtgtttt 1501 cctctttgtt gaggaaatct ttataactgg caccctcacc aggattgcaa agcacgattg 1561 atgggatccc tcctttaatg acaactggct tgccgtactt gcaatttgac tgccatttct 1621 tttgggccca aaaaagttct ttccagtgct ttagctttag atagtgcggt gcgacatcat 1681 caatgacgtt atactccact tcgtccgagt acactctgga attgaagtct aggtgtccac 1741 taagataatt atgtgggcct aatgatcgag cccacatcgt ctttcctgtt cttgaatcac 1801 cttcgactat gagacttaat ggtctttctg gccgcgcagc gggactcttt ccaaaataat 1861 catctgccca ttcttgcatc tcgtcgggaa cgttagtgaa agaggagagt ggaaacggag 1921 gagtccatgg ctccggaggc ttttggaata ttctggttgc gttagcaacc aggttgtgat 1981 gttgaaggaa gaaatgttgc ggttgttctt cctttattat ttgcagagct gcctctgctg 2041 atcctgcatt taacgcttta gcatatgtgt cgttagcaga ttgctgacct cctctagcag 2101 atctgccgtc gatctggaac tgtccccatt caactgtatc tccgtccttg tcgatgtagg 2161 acttgacgtc ggagcttgat ttagctccct gtatgttcgg atggaaatgt gctgacctgg 2221 ttggggagac cagatcgaag aatctgttat tcgtgcactg gtattttcct tcgaactgga 2281 tgagcacatg tagatgaggt tgcccatctt cgtgaaattc tctgcagatc ttgatgaatt 2341 tcttgttaac aggagttgct aggttttgta tttgggaaag tgcctcttct ttggtaagag 2401 agcactgggg ataagtgagg aaatagttct tggattgaac tctaaatttc ttaggcggtg 2461 gcattttagt aataagaagg ggtactccag ttgagctccc tcaaaacttg ctcatgcaat 2521 tggagtattg gagtactata tatactataa ctctcaatct cggttttgga acacgtggcg 2581 gccatccgta taatatt //