LOCUS       KT583731                2913 bp    DNA     circular VRL 09-FEB-2016
DEFINITION  Beet curly top virus isolate California F1-2-25, complete genome.
ACCESSION   KT583731
VERSION     KT583731.1
KEYWORDS    .
SOURCE      Beet curly top virus
  ORGANISM  Beet curly top virus
            Viruses; ssDNA viruses; Geminiviridae; Curtovirus.
REFERENCE   1  (bases 1 to 2913)
  AUTHORS   Chen,L.-F., Melgarejo,T.A., Creamer,R. and Gilbertson,R.L.
  TITLE     Evidence that recombination plays an important role in the
            evolution and emergence of curtoviruses (family Geminiviridae)
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2913)
  AUTHORS   Chen,L.-F. and Gilbertson,R.L.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-AUG-2015) Plant Pathology, UC Davis, One Shields
            Ave, Davis, CA 95616, USA
COMMENT     ##Assembly-Data-START## Sequencing Technology :: Sanger dideoxy
            sequencing ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..2913
                     /mol_type="genomic DNA"
                     /country="USA"
                     /collection_date="2013"
                     /host="Solanum lycopersicum"
                     /db_xref="taxon:10840"
                     /isolate="California F1-2-25"
                     /organism="Beet curly top virus"
     gene            254..520
                     /gene="V3"
     CDS             254..520
                     /codon_start=1
                     /protein_id="AMD16411.1"
                     /gene="V3"
                     /translation="MMVCLPDWLFLLFIFSILLQSGTNFYGTFQSGSISRQLSSLSSS
                     IDQLFFKVQQVVYSGYPSRDRGSDPRRRRGLSAIPEGREEATEV"
                     /product="movement protein"
     gene            330..710
                     /gene="V2"
     CDS             330..710
                     /codon_start=1
                     /protein_id="AMD16412.1"
                     /gene="V2"
                     /translation="MGPFRVDQFPDNYPAFLAVSTSCFLRYNRWCILGIHQEIEALTL
                     EEGEVFLQFQKEGKKLLRCKGQFYRKCSLYEEIYKKYVYNVPEKKGESSKCVAEEEED
                     YYYFEEIPMEETCDKKQDSEVKDV"
                     /product="ss-ds DNA regulator"
     gene            550..1314
                     /gene="V1"
     CDS             550..1314
                     /codon_start=1
                     /protein_id="AMD16413.1"
                     /gene="V1"
                     /translation="MRKYTRNTYTMSQKRKVNLQSAWPKKRRTTTTSKKYQWRRPVTK
                     NRTPKLKMYDDMLGAGGIGSTISNNGMITMLNNYVQGIGDSQRSNNVTVTKHVKFDMA
                     LMGSSPFWETPNYMTQYHWIIVDKDVGSVFPTKLSSIFDIPDNGQAMPSTYRIRRDMN
                     ERFIVKKKWKTHLMSTGTGYGGKETYKAPSMPNYKKPMNINVRNLNVKTIWKDTGGGK
                     YEDVKENALLYVVVNDNTDNTNMYATLFGNCRCYFY"
                     /product="capsid protein"
     gene            complement(1330..1740)
                     /gene="C3"
     CDS             complement(1330..1740)
                     /codon_start=1
                     /protein_id="AMD16414.1"
                     /gene="C3"
                     /translation="MNAITDFRTELPITLEQATKSTPTTSVPNPLYFKLLWFERYGTI
                     YQLKVQMRFNHNLRKSLNLHKCWIDMTITGSHRTLTGDRFLRVLKNQVDREIKKRSSL
                     SINIVIQILNHVLYSIFNFVDTVIQYTSIAMKLY"
                     /product="replication enhancer"
     gene            complement(1427..1870)
                     /gene="C2"
     CDS             complement(1427..1870)
                     /codon_start=1
                     /protein_id="AMD16415.1"
                     /gene="C2"
                     /translation="MKHLSPGLYKIQPSLNSPALSLIKIQKRPRKVNLPCKCHFTIHH
                     ECHHGFSHGTTYYPGTGDEINTNNISSESTLLQTTMVRAIRNDLSTQSPDEIQPQPPQ
                     IAQPTQVLDRYDDNWITQDIDWRPFFESLEEPSRQGNQKTIFSLN"
                     /product="pathogenicity-associated protein"
     gene            complement(1761..2825)
                     /gene="C1"
     CDS             complement(1761..2825)
                     /codon_start=1
                     /protein_id="AMD16416.1"
                     /gene="C1"
                     /translation="MPFYKKAKNFFLTYPQCSVTKEDALEQLLAINTPSNQKYIRICR
                     ELHQNGEPHLHALIQFEGKVQIRNARYFDLQHRSTSKQFHCNIQGAKSSSDVKSYVSK
                     DGDHIDWGEFQVDERSARGGQQTANDAAAEALNAGNALEALQIIREKLPEKYIFQYHN
                     LKPNLEAIFLPPPDIYQPPFPLSSFTRVPDIIQEWADSYFGLEPAARPYRYNSIIIEG
                     DSRTGKTMWARSLGPHNYITGHLDFSLKTYSDNVLYNVIDDVDPNYLKMKHWKHLIGA
                     QREWQTNLKYGKPRVIKGGIPSIILCNPGDGSSYQDFLDKSENEALKSWTIQNSAFVK
                     LSGPLFDKDTEASSQGQSPL"
                     /product="replication-associated protein"
     gene            complement(2423..2680)
                     /gene="C4"
     CDS             complement(2423..2680)
                     /codon_start=1
                     /protein_id="AMD16417.1"
                     /gene="C4"
                     /translation="MGNHICMPLFNSKEKSRSEMPVTSICNIEVPANNSTAIFRELNP
                     VPTSSPTSQRTEITSTGVNSKSMRDLHAEVNRRLMMLQQRH"
                     /product="cell cycle regulator"
ORIGIN      
        1 accggatggc ccctaaattt ttttccgctc aattgtaacg tgacacgtgt aatcgcatta
       61 ttgtttgtcg gtgattggaa aacttacata ggaagtttca ttctctaaca agttttgact
      121 ggtcaaaagt cgcgaccgac aaatagcttt acttttgtaa agtgaagtgt ttgttactat
      181 tcaaaacttg ctgtgtaagt ttggaatatt tttctactta aatagctata cgaatacgta
      241 taggtattta taaatgatgg tctgtttacc agactggtta tttttgctat ttatcttcag
      301 tattctactg caatcaggta cgaactttta tgggaccttt cagagtggat caatttccag
      361 acaattatcc agcctttcta gcagtatcga ccagttgttt tttaaggtac aacaggtggt
      421 gtattctggg tatccatcaa gagatagagg ctctgaccct agaagaaggc gaggtctttc
      481 tgcaattcca gaaggaaggg aagaagctac tgaggtgtaa aggtcaattt tatagaaagt
      541 gttcgttgta tgaggaaata tacaagaaat acgtatacaa tgtcccagaa aagaaaggtg
      601 aatcttcaaa gtgcgtggcc gaagaagagg aggactacta ctacttcgaa gaaataccaa
      661 tggaggagac ctgtgacaaa aaacaggact ccgaagttaa agatgtatga tgatatgttg
      721 ggtgctggtg gtataggatc aaccattagt aataatggta tgattactat gttgaataat
      781 tatgtccagg gtattggtga tagtcagaga tcgaacaacg ttactgtgac gaagcatgtg
      841 aagtttgata tggctcttat ggggagctct ccgttctggg agacccctaa ttatatgacc
      901 caatatcatt ggattatcgt agacaaggat gttgggtcag tgtttcctac taagttatcg
      961 agtatatttg atattcccga taacggtcag gctatgccgt ctacttatcg tattcgaaga
     1021 gatatgaatg agaggtttat tgtgaagaag aaatggaaaa ctcatttgat gtctactggt
     1081 actggttatg gaggcaagga gacttacaag gctccttcaa tgccaaatta caagaaaccg
     1141 atgaatatca atgtccgtaa tttgaacgtg aagactattt ggaaagacac tggcggtggg
     1201 aagtatgaag acgtgaaaga gaatgcttta ctctatgttg ttgttaatga taatactgat
     1261 aatactaata tgtatgccac tttgtttggc aattgtagat gttatttcta ttaataaaaa
     1321 tatgtttttt taatacaact tcattgcaat actagtatat tggataacag tatcgacgaa
     1381 attgaagatg gaatacaata catgatttaa tatttgtatt acaatgttaa ttgagagaga
     1441 agatcgtttt ttgatttccc tgtcgacttg gttcttcaag actctcaaaa aacggtctcc
     1501 agtcaatgtc ctgtgtgatc cagttatcgt catatcgatc cagcacttgt gtaggttgag
     1561 cgatttgcgg aggttgtggt tgaatctcat ctggactttg agttgataaa tcgttccgta
     1621 tcgctcgaac catagtagtt tgaagtagag tggattcgga actgatgttg ttggtgttga
     1681 tttcgtcgcc tgttccaggg taataggtag ttccgtgcga aaatccgtga tggcattcat
     1741 gatgaattgt gaagtgacac ttacagggga gattgacctt gcgaggacgc ttctgtatct
     1801 ttatcaaaga gagggccgga gagtttaacg aaggctgaat tttgtatagt ccaggactta
     1861 agtgcttcat tttctgattt atctaggaag tcctggtaag agctgccatc tcctgggttg
     1921 cataatataa tactgggaat accaccttta atgacacgtg gttttccata ctttaagttt
     1981 gtctgccact ctctttgtgc gcctataagg tgcttccaat gcttcatctt taagtaattg
     2041 ggatctacat catcaatgac gttatacaaa acattatcac tataagtttt taaactaaaa
     2101 tctaaatgcc cagtaatata attatgtgga cctaatgacc tggcccacat tgttttacca
     2161 gttcttgaat caccctctat tattatacta ttatatctat aaggccgcgc agcgggctct
     2221 aaaccaaagt aagaatcagc ccactcttga ataatatctg gaactcgagt gaaagaagaa
     2281 agaggaaatg gtggttgata aatatctgga ggaggaagaa aaatagcctc taagttaggt
     2341 ttgaggttgt gatactgaaa aatatatttt tctgggagtt tctcccttat tatctgcaga
     2401 gcttctaatg cattacctgc atttaatgcc tctgctgcag catcattagc cgtctgttga
     2461 cctccgcgtg cagatctctc atcgacttgg aattcacccc agtcgatgtg atctccgtcc
     2521 tttgagacgt aggacttgac gtcggaactg gatttagctc cctgaatatt gcagtggaat
     2581 tgtttgctgg tacttcgatg ttgcagatcg aagtaacggg catttcggat ctggactttt
     2641 ccttcgaatt gaataagggc atgcagatgt ggttccccat tttgatgtaa ttctctgcag
     2701 atgcgaatat atttttgatt cgaaggtgta tttatagcga ggagctgttc taaggcgtct
     2761 tctttggtta ctgaacattg agggtatgta aggaaaaaat tttttgcttt tttgtaaaaa
     2821 ggcatattga atcgggctct cttcaaattc ccctatcaat tgggtgctat gggtgctttt
     2881 atataccacc aaggggccat ccgcaataat att
//