LOCUS KX665536 6746 bp RNA linear VRL 31-AUG-2017 DEFINITION Beet necrotic yellow vein virus isolate PV0467/Yu2 segment RNA1, complete sequence. ACCESSION KX665536 VERSION KX665536.1 KEYWORDS . SOURCE Beet necrotic yellow vein virus ORGANISM Beet necrotic yellow vein virus Viruses; ssRNA viruses; ssRNA positive-strand viruses, no DNA stage; Benyviridae; Benyvirus. REFERENCE 1 (bases 1 to 6746) AUTHORS Laufer,M., Mohammad,H., Varrelmann,M. and Maiss,E. TITLE Construction of infectious full-length cDNA clones of Beet soil-borne mosaic virus and Beet necrotic yellow vein virus A-type by isothermal in vitro recombination analysis of systemic movement, vector transmissions and transreplication properties JOURNAL Unpublished REFERENCE 2 (bases 1 to 6746) AUTHORS Laufer,M., Mohammad,H., Varrelmann,M. and Maiss,E. TITLE Direct Submission JOURNAL Submitted (04-AUG-2016) Phytomedicine, Leibniz Universitaet Hannover - Institute of Horticultural Production Systems, Herrenhaeuser Strasse 2, Hannover 30419, Germany COMMENT ##Assembly-Data-START## Assembly Method :: CLC Main Workbench version 6.8.1 Sequencing Technology :: Sanger dideoxy sequencing ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..6746 /mol_type="genomic RNA" /country="Yugoslavia" /segment="RNA1" /host="Chenopodium quinoa" /db_xref="taxon:31721" /isolate="PV0467/Yu2" /serotype="A-type" /organism="Beet necrotic yellow vein virus" CDS 154..6483 /codon_start=1 /protein_id="AQT03616.1" /translation="MADSFGFTPMEVLLFGGESVQLLTSDMPIDVQWGFVHSTRCYAL WKDDLIHLNPLLKYSQRIAKRWERLVSGFVGPVPLDKLLSLLAKLMRYCVNMGVSVQE IYLSDAIVSSSYMLHVSRTAGCVSFSWLYAKLSMFASCGKFWVGSSHHTAANMIEGSR AVNGPDVAISEMVEAFHLEVKSSLVVTVSLTPREKKILERELGFVPLYKQKSRAPRNH PVLAALREVMRQEYSASCNILNTKLKTLVVGAASREVNCYSSNPSVHYYFANKDSKDL VRTTLELLHSALATKYRNMESGERELMNNLKGCGYIVKRSVENAVYEVVSDKDVAEVL RYAQTVASTKKEAKRKPNTGKRKMVMSEATRRTIELHELSRIVAEEKKIPNHFHFDES DFASVGNFTQLVCEDVGYNFSVDAWLHLFEATGAQTAVGYMALPNELLFEHYPISDYY DYWEGVEKHGSLGGITVSPLRNGQVVGMPTGVFQPVHFDKTSAGLGIPGSKMGTAERV ICHMSDGLGNGYNHVKSDWQTLLKHPILSSSKYNFAVEVDLTGRYGCLATFRLTRVTG VKYVARTIKLRPEDRYVRVLDLLHIVRSIRLKGHAGLKEPYQYFPVYKREVDTTVSYC FSIAEKSLTVQNIANFIRHHIGGVSLVNKELVSAWRLNPQLVPSFAYAVYFYVVNLRG ELDGMLQKLMKKGITWADRLKANVSAFLRDMVDPISFLWTWLFERRLVDQIFQDGTDV FYQMDRACVDEKALRLNDHIKITRDFLPADTLLPEGWSLDDWEKAPDSLKTLSAAASL PVECGAVNCVGKSFKSVRTLLPPSVVTSPVEQFFKSGGKFRDDAEFAELLSAHYRWQM DNSFCACQVCAALTGKTGSQVVECRWKAESMYTFSMSQTEVDDFRNEIKAQSIEKGNR FGEMLIGVHQKIPTQAFEVSVRLEYVKGGPGTGKSFLIRSLADPIRDLVVAPFIKLRS DYQNQRVGDELLSWDFHTPHKALDVTGKQIIFVDEFTAYDWRLLAVLAYRNHAHTIYL VGDEQQTGIQEGRGEGISILNKIDLSKVSTHVPIMNFRNPVRDVKVLNYLFGSRMVPM SSVEKGFSFGDIKEFSSLSNIPDTKIIHYSDETGEHMMPDYVRGVSKTTVRANQGSTY DNVVLPVLPSDLKLINSAELNLVALSRHRNKLTILLDNDGMNIGAVLKGMLEGVPEEL ERRDYIVGMYLGLHLPIKKEFFFPESEFAKSFRLMVAKYEAFVPYDSDLPTLVSQGDV VVLDIARVENDINDAFDCADFYNLVSRPNNCLVVAISECLGVTLEKLDNLMQANAVTL DKYHAWLSKKSPSTWQDCRMFADALKVSMYVKVLSDKPYDLTYEVDGAGSSVTLHLVG KESDGHFIAAPLSPSLSTNERESGDDSKKPADDSDTFDAANLFADKGVSSADIEAFCA YLEKTLMATIMEYDLRLQSWANVVDDTDDFYQINISEFRQSTCFGKLLSALEVLKVDV SRKRFISDWLCKNLENKQFRWRWSSSVASTSSAGSNVDDDFVNMAGGKTDANVDPADV LRQSFMDYASEFVPILIAESPILMPLVEPEPILSKCMVPEFDAFLLIKEFDLDNGADE YQCAYLNESVANRVGDKFVSGVLDTDIISPLNLRGHPIAENVKYHSMCVAPAQIYFKR NQWQELQVQQARYLFRKVRNSPSSTQDSVARMVAQLFVSDCLVPNVADTFSASNLWRI MDKAMHDMVTKNYQGQMEEEFTRNAKLYRFQLKDIEKPLKDPETDLAKAGQGILAWSK EAHVKFMVAFRVLNDLLLKSLNSNVVYDNTMSETEFVGKINAAMNIVPDSAINGVIDA AACDSGQGVFTQLIERHIYAALGISDFFLDWYFSFREKYVMQSRYVRAHMSYVKTSGE PGTLLGNTILMGAMLNAMLRGTGPFCMAMKGDDGFKRQANLKINDQMLKLIKKETVLD FKLDLNVPITFCGYALSNGHLFPSVSRKLTKIAAHRFREYKHFCEYQESLRDWIKNLP KDPAVYADFLECNASLSCRNVDDVQRWLDAIISVSRIGREQFMMMFPIREVFMSLPPV EDSLGELSSTKVAVSIGDNVSNVVRKVARVDMKKF" /product="RNA-dependent RNA polymerase" /note="RdRp" ORIGIN 1 aaattcgatt cttcccattc gccatcattg aatcattact cgtgtactgg aacgcggtta 61 ggagtggctc caaagcatct tctttgaaaa tagattgcga agtgagttca cctaagacga 121 cgtcggtgtt ttacgagttt ttacataatc aacatggcag attcgttcgg tttcactcca 181 atggaggttt tgctttttgg tggtgaatcg gttcagttgt taacttcaga catgcctatt 241 gatgtccagt ggggctttgt acactccact cgatgttatg ctctctggaa agacgacttg 301 attcatctca atccgctgtt gaaatattca cagcgaattg caaaacggtg ggaaaggtta 361 gtttcgggct ttgttggccc agtaccgctt gataagttgt tgtctttgtt ggcaaaactt 421 atgaggtatt gtgttaacat gggggtgtct gtacaggaga tatatttgtc tgatgctatt 481 gtttcatcgt cttatatgtt gcatgtgtct aggactgcag gttgtgtctc ttttagttgg 541 ttgtatgcca agctgtccat gtttgcttcg tgtggcaagt tctgggtagg gtcttcacat 601 cacacggctg ccaacatgat tgaaggttcc cgtgctgtga atggtccgga tgtggctatt 661 tctgagatgg ttgaagcctt ccatttagag gtgaagtctt cactcgttgt aactgtatct 721 ttgactccta gggagaaaaa gattttggag cgagagctag gttttgtgcc gttgtacaaa 781 cagaaaagta gagctccacg caatcaccca gtgctggctg ctcttcgcga ggttatgagg 841 caggagtatt ctgctagttg taatattctt aatacaaagt tgaaaacact ggtagttggt 901 gctgccagtc gtgaagttaa ttgttattcg tctaatccgt ctgtacatta ctattttgct 961 aataaagata gcaaggattt ggtaaggacc actctggagt tgttgcatag cgctttggct 1021 acaaagtacc gcaatatgga aagcggtgag cgagaactca tgaataattt gaagggttgt 1081 ggttatattg tcaaaaggtc ggttgaaaat gctgtctatg aggttgtttc cgataaagat 1141 gttgccgaag tgttaaggta tgcgcaaact gtcgcttcaa cgaagaaaga ggcgaaaagg 1201 aaacctaaca ctggaaagcg aaaaatggtc atgtcggaag caactcgtag aacaatcgaa 1261 ctgcatgagt tgtcgcgtat tgtagccgaa gagaagaaga ttcctaacca tttccacttt 1321 gatgaaagcg attttgcttc tgttggtaat tttactcagt tggtttgtga agatgttggt 1381 tacaattttt ctgtggatgc ttggttgcat ttgttcgagg cgaccggtgc gcagactgcc 1441 gttggttata tggcattgcc taatgaactt ttgtttgaac attatccaat atcagattat 1501 tatgattatt gggagggtgt tgaaaagcat ggttcattgg gtggtattac tgtttcccct 1561 ttgcggaatg gacaggttgt tggtatgccg actggggttt ttcaacctgt tcattttgac 1621 aagacgtctg ctggtttagg tattcctggt tcaaagatgg gtactgctga acgtgttata 1681 tgtcacatgt cagatggact tggaaatggc tacaatcatg ttaaaagtga ttggcagacg 1741 ttgttgaaac atcctatttt gtcttcttca aagtataatt ttgctgttga agtggattta 1801 acgggacgtt atggttgtct tgctaccttt cggttaactc gtgtgactgg agtcaagtat 1861 gttgctagaa ctataaaatt gcgtccagaa gataggtatg ttcgggtgtt ggatttgtta 1921 catattgtgc gtagtattag gttgaaaggg catgccggct tgaaagagcc atatcagtat 1981 tttcctgtgt ataaacgtga ggtagatacg acggtgtctt actgtttttc tattgctgaa 2041 aaatcgttga cagtacaaaa cattgctaat tttattagac atcatattgg tggtgtttct 2101 ttagttaaca aagaattagt atcggcgtgg cgtctgaatc cacaacttgt tccttcgttc 2161 gcatatgccg tttactttta tgttgttaat ttgagaggtg agttggatgg gatgttgcag 2221 aagttaatga aaaagggtat cacatgggca gataggttga aggctaatgt ttcagcgttt 2281 ttgcgagata tggtagatcc tattagtttt ttgtggacgt ggttatttga gaggagatta 2341 gtcgatcaaa tttttcagga tgggactgat gttttttacc agatggatcg tgcttgtgtt 2401 gatgagaagg cattgcgttt gaacgatcac attaaaatta cacgagactt tttgcctgct 2461 gacactttac ttcctgaagg atggtcttta gacgattggg aaaaagctcc cgatagtttg 2521 aagactcttt cggcagctgc ttcgttgcca gtagagtgcg gggcggtaaa ttgtgttggt 2581 aagtcgttta agagcgtgcg tactctatta ccaccatctg ttgttacttc acctgttgag 2641 cagtttttca aatctggtgg taaatttaga gatgatgccg agtttgcgga attgttgagt 2701 gcgcactatc gctggcagat ggacaattct ttttgtgctt gtcaggtttg tgctgctttg 2761 actggtaaaa cgggttctca agttgttgaa tgcagatgga aagctgagtc tatgtataca 2821 ttttctatgt cacaaactga ggttgatgat tttagaaatg agattaaggc tcaatctatt 2881 gaaaagggaa atcgttttgg tgaaatgtta ataggtgtac atcagaaaat tcctacacaa 2941 gcctttgagg tttcagttcg actcgaatat gttaaaggtg ggcctggtac gggtaaatct 3001 tttcttataa gatcactggc tgaccctatc agggatcttg tggttgctcc gttcataaaa 3061 ttgcgttctg attatcagaa tcaacgagtt ggtgatgagc ttctttcttg ggactttcac 3121 acgcctcaca aagcattgga tgttactggt aagcaaatta tttttgttga tgagtttaca 3181 gcctatgatt ggcggttgct agctgtgttg gcttatagaa atcatgccca tactatttac 3241 ttagttggcg atgagcagca gactggtatt caagagggtc gtggagaagg aatatcgata 3301 cttaacaaaa ttgatctgtc taaggtttct acacatgttc caatcatgaa ctttagaaat 3361 cctgtccgtg atgttaaggt attaaattat ctgttcgggt ctcgtatggt tcctatgtct 3421 tccgttgaaa agggatttag tttcggggat attaaagaat tttcgtcttt gtcaaatatc 3481 ccagacacta aaatcattca ttattccgat gagactggtg aacatatgat gcctgattac 3541 gttaggggag tgtcaaaaac tactgtccgt gctaatcagg gtagtaccta cgataatgtt 3601 gttttgcctg ttttaccatc tgatttgaaa ctgattaact cagctgagtt aaatttggta 3661 gctttatctc gtcacaggaa taagttaacc attttattgg acaatgatgg tatgaatatt 3721 ggtgctgttt tgaaaggcat gcttgagggt gtgccggaag aactcgaaag aagggattac 3781 attgttggga tgtaccttgg gttacattta cctattaaga aagagttctt ctttcctgag 3841 tctgagtttg ctaagtcgtt tagattaatg gttgctaagt atgaggcatt tgtaccttac 3901 gatagtgatc tgccaacttt ggtttcacaa ggagatgtcg ttgttttgga catagcacgt 3961 gtggaaaacg atattaatga tgcctttgat tgtgcagatt tctataatct tgtgtctcgt 4021 cctaacaatt gtttagtagt agctatttca gaatgtttag gtgtgacgct agaaaaattg 4081 gacaatctta tgcaagctaa cgctgtgacg cttgataagt atcacgcgtg gttgtctaag 4141 aagtctccat caacttggca agactgtaga atgtttgccg atgctctgaa ggtttccatg 4201 tacgttaagg ttttatctga caaaccttac gatctaactt atgaggttga tggtgctggt 4261 tcctcagtga cattacattt agttggtaag gaaagcgatg ggcattttat tgctgccccg 4321 cttagtccgt cgctttctac caatgagaga gagtccggag atgatagtaa gaaaccggct 4381 gatgattctg acacctttga tgctgctaat ttgtttgctg ataagggtgt ttcttccgct 4441 gatatagagg ctttttgtgc ctatttagaa aagactttaa tggcaacaat tatggagtat 4501 gatttgagat tgcaatcgtg ggctaatgtg gttgatgata ctgacgattt ttatcaaatt 4561 aatatttctg agtttcgtca gtccacgtgt tttggtaaat tgttgtcagc gcttgaagtt 4621 ttgaaggttg atgtttcgag gaagaggttt atatctgatt ggttgtgtaa aaatcttgag 4681 aataaacaat tccggtggcg ttggtcttct agtgtggctt caactagttc ggccgggtcg 4741 aatgtcgacg atgattttgt caatatggcg gggggaaaga ctgatgctaa tgttgatcct 4801 gctgatgttt tgaggcagag ttttatggat tatgcatcgg aatttgttcc tatccttatc 4861 gctgaatcac caatacttat gccgttagtt gagcctgaac cgatattgtc caagtgtatg 4921 gtgcctgagt ttgacgcctt tttattaata aaggaatttg atttggacaa tggtgctgat 4981 gagtatcaat gcgcttatct taatgaatct gttgctaatc gtgttggtga caaatttgtt 5041 tcgggtgttt tagacactga tattatatct ccattaaatc tgaggggaca tcctattgct 5101 gaaaatgtta aatatcacag tatgtgtgtg gccccggctc agatatattt taagcggaat 5161 cagtggcaag aattacaggt tcaacaggct cggtacttat ttcgaaaagt gagaaattct 5221 ccgtcatcga cacaagatag tgttgcacgt atggttgctc agctatttgt ttctgattgt 5281 ttggtgccaa acgtagctga tactttttct gcttccaatt tgtggcgaat tatggacaaa 5341 gctatgcatg acatggtcac aaaaaattat caaggacaaa tggaagagga gtttacgcgt 5401 aatgctaaat tatatcgttt tcagttgaag gatattgaaa aacctttgaa ggacccagag 5461 actgatttgg caaaggctgg tcaagggata ttggcatggt ctaaggaggc acatgttaag 5521 tttatggttg cttttagagt tttaaatgat ttgttattga agtcgttaaa ctctaatgtt 5581 gtttacgata acacaatgtc tgagaccgaa tttgttggaa aaataaatgc cgccatgaat 5641 atagtaccgg atagtgctat aaacggggtt atcgatgctg ctgcttgcga ttctgggcaa 5701 ggggttttta cccaattgat agaaagacat atttatgctg ctttgggcat ttctgacttc 5761 tttttggatt ggtatttctc atttcgtgag aaatatgtta tgcagtccag atatgtcaga 5821 gcacatatgt cttatgttaa gactagtgga gaacccggca ctttgcttgg taacaccatt 5881 ttaatgggtg ctatgttaaa tgctatgctt cgtgggaccg gaccattttg tatggccatg 5941 aagggcgatg atggttttaa aaggcaggct aatttgaaaa ttaacgatca aatgttaaag 6001 ttgattaaaa aagaaactgt cttggatttc aaattggatt taaatgttcc tatcactttt 6061 tgtggttatg ctttatctaa tggacatttg tttccaagtg tttcacgtaa attgacgaag 6121 atagcagcac acaggttccg tgagtataag catttttgtg aataccagga atctttgcgt 6181 gattggatta aaaatcttcc caaagaccca gctgtttatg ctgatttttt ggagtgtaat 6241 gctagcttat cttgtcgcaa tgttgacgat gttcaacgtt ggttggatgc tattatctct 6301 gtgtctcgaa ttgggcgtga gcaatttatg atgatgttcc cgatacggga agtttttatg 6361 tcattgccac ccgttgagga tagtttgggt gagctatctt ctacgaaagt ggctgtgtct 6421 attggggaca atgtttctaa tgttgttaga aaggttgctc gtgtcgatat gaaaaagttt 6481 taatgtgtaa tatagtaata taatacgttg tatacttgtg agtagtataa gtttgaaaat 6541 gaataaaggc catgccacag gcctcctatc ttgatgaagg ttgttgtggt tttctcatta 6601 ctgttttatt attgtttgag ttgcttatgt tggttcttga ttatgtggtg cataattatt 6661 gaactaattg tttgttgggt tgtaatgtac tgactgggtg tgaattgtac cagtcgttag 6721 agggtttact atcagtatat tgatat //