/users/252891/scratch/edge/database/bacillus/results/Banthracis_Ames_norepeats.fna /users/252891/scratch/edge/database/bacillus/results/Banthracis_A0248_norepeats.fna
NUCMER

[S1]	[E1]	[S2]	[E2]	[LEN 1]	[LEN 2]	[% IDY]	[LEN R]	[LEN Q]	[COV R]	[COV Q]	[TAGS]
1	499357	1	499358	499357	499358	99.99	499357	499358	100.00	100.00	Banthracis_Ames_1183423_1682779	Banthracis_A0248_1183445_1682802
1	7417	1	7417	7417	7417	100.00	7417	7417	100.00	100.00	Banthracis_Ames_14354_21770	Banthracis_A0248_14254_21670
1	99	1	99	99	99	100.00	99	99	100.00	100.00	Banthracis_Ames_150395_150493	Banthracis_A0248_150295_150393
1	94029	1	94029	94029	94029	100.00	94029	94029	100.00	100.00	Banthracis_Ames_150976_245004	Banthracis_A0248_150876_244904
1	369668	1	369669	369668	369669	99.99	369668	369669	100.00	100.00	Banthracis_Ames_1684258_2053925	Banthracis_A0248_1684281_2053949
1	100	20248	20347	100	100	100.00	9162	20347	1.09	0.49	Banthracis_Ames_1_9162	Banthracis_A0248_5207073_5227420
101	9162	1	9062	9062	9062	100.00	9162	9062	98.91	100.00	Banthracis_Ames_1_9162	Banthracis_A0248_1_9062
1	5304	1	5304	5304	5304	100.00	5304	5304	100.00	100.00	Banthracis_Ames_2054239_2059542	Banthracis_A0248_2054263_2059566
1	669204	1	669208	669204	669208	99.99	669204	669208	100.00	100.00	Banthracis_Ames_2059856_2729059	Banthracis_A0248_2059880_2729087
1	7106	1	7106	7106	7106	100.00	7106	7106	100.00	100.00	Banthracis_Ames_21861_28966	Banthracis_A0248_21761_28866
1	183	1	183	183	183	100.00	183	183	100.00	100.00	Banthracis_Ames_245084_245266	Banthracis_A0248_244984_245166
1	81	1	81	81	81	97.53	81	81	100.00	100.00	Banthracis_Ames_245467_245547	Banthracis_A0248_245367_245447
1	432	1	432	432	432	100.00	432	432	100.00	100.00	Banthracis_Ames_245704_246135	Banthracis_A0248_245604_246035
1	15389	1	15389	15389	15389	100.00	15389	15389	100.00	100.00	Banthracis_Ames_251170_266558	Banthracis_A0248_251070_266458
1	8256	1	8256	8256	8256	100.00	8256	8256	100.00	100.00	Banthracis_Ames_271606_279861	Banthracis_A0248_271506_279761
1	145394	1	145394	145394	145394	99.99	145394	145394	100.00	100.00	Banthracis_Ames_2736277_2881670	Banthracis_A0248_2736305_2881698
1	4919	1	4919	4919	4919	100.00	4919	4919	100.00	100.00	Banthracis_Ames_284913_289831	Banthracis_A0248_284813_289731
1	85622	1	85622	85622	85622	100.00	85622	85622	100.00	100.00	Banthracis_Ames_2883149_2968770	Banthracis_A0248_2883177_2968798
1	237351	1	237351	237351	237351	100.00	237351	237351	100.00	100.00	Banthracis_Ames_294883_532233	Banthracis_A0248_294783_532133
1	774026	1	774025	774026	774025	99.99	774026	774025	100.00	100.00	Banthracis_Ames_2968910_3742935	Banthracis_A0248_2968938_3742962
1	30269	1	30269	30269	30269	100.00	30358	30269	99.71	100.00	Banthracis_Ames_34156_64513	Banthracis_A0248_34056_64324
1	490630	1	490630	490630	490630	99.99	490630	490630	100.00	100.00	Banthracis_Ames_3743336_4233965	Banthracis_A0248_3743363_4233992
1	112	1	112	112	112	100.00	112	112	100.00	100.00	Banthracis_Ames_4234049_4234160	Banthracis_A0248_4234076_4234187
1	53337	1	53337	53337	53337	100.00	53337	53337	100.00	100.00	Banthracis_Ames_4234244_4287580	Banthracis_A0248_4234271_4287607
1	198732	1	198732	198732	198732	100.00	198732	198732	100.00	100.00	Banthracis_Ames_4287653_4486384	Banthracis_A0248_4287680_4486411
1	160636	1	160636	160636	160636	100.00	160636	160636	100.00	100.00	Banthracis_Ames_4489292_4649927	Banthracis_A0248_4489319_4649954
1	106	1	106	106	106	100.00	106	106	100.00	100.00	Banthracis_Ames_4650010_4650115	Banthracis_A0248_4650037_4650142
1	91	1	91	91	91	100.00	91	91	100.00	100.00	Banthracis_Ames_4650276_4650366	Banthracis_A0248_4650303_4650393
1	185	1	185	185	185	100.00	185	185	100.00	100.00	Banthracis_Ames_4650445_4650629	Banthracis_A0248_4650472_4650656
1	108	1	108	108	108	100.00	108	108	100.00	100.00	Banthracis_Ames_4650707_4650814	Banthracis_A0248_4650734_4650841
1	104	1	104	104	104	100.00	192	104	54.17	100.00	Banthracis_Ames_4650905_4651096	Banthracis_A0248_4650932_4651035
1	86	1	86	86	86	100.00	86	86	100.00	100.00	Banthracis_Ames_4651742_4651827	Banthracis_A0248_4651768_4651853
1	184763	1	184763	184763	184763	100.00	184763	184763	100.00	100.00	Banthracis_Ames_4656949_4841711	Banthracis_A0248_4656975_4841737
1	16567	1	16567	16567	16567	100.00	16567	16567	100.00	100.00	Banthracis_Ames_4841817_4858383	Banthracis_A0248_4841843_4858409
1	60989	1	60989	60989	60989	100.00	60989	60989	100.00	100.00	Banthracis_Ames_4858489_4919477	Banthracis_A0248_4858515_4919503
1	75513	1	75513	75513	75513	100.00	75513	75513	100.00	100.00	Banthracis_Ames_4920646_4996158	Banthracis_A0248_4920672_4996184
1	24919	1	24919	24919	24919	100.00	24919	24919	100.00	100.00	Banthracis_Ames_4997328_5022246	Banthracis_A0248_4997354_5022272
1	66008	1	66008	66008	66008	100.00	66008	66008	100.00	100.00	Banthracis_Ames_5022386_5088393	Banthracis_A0248_5022412_5088419
1	114711	1	114711	114711	114711	100.00	114711	114711	100.00	100.00	Banthracis_Ames_5092075_5206785	Banthracis_A0248_5092101_5206811
1	102	1	102	102	102	100.00	102	102	100.00	100.00	Banthracis_Ames_5206865_5206966	Banthracis_A0248_5206891_5206992
1	20247	1	20247	20247	20247	100.00	20247	20347	100.00	99.51	Banthracis_Ames_5207047_5227294	Banthracis_A0248_5207073_5227420
1	109	1	109	109	109	100.00	109	109	100.00	100.00	Banthracis_Ames_537348_537456	Banthracis_A0248_537248_537356
1	181	1	181	181	181	100.00	181	181	100.00	100.00	Banthracis_Ames_537802_537982	Banthracis_A0248_537702_537882
1	96	1	96	96	96	100.00	96	96	100.00	100.00	Banthracis_Ames_538069_538164	Banthracis_A0248_537969_538064
1	4612	1	4612	4612	4612	100.00	4612	4612	100.00	100.00	Banthracis_Ames_538460_543071	Banthracis_A0248_538360_542971
1	11649	1	11649	11649	11649	100.00	11649	11649	100.00	100.00	Banthracis_Ames_543144_554792	Banthracis_A0248_543044_554692
1	176255	1	176256	176255	176256	99.99	176255	176256	100.00	100.00	Banthracis_Ames_565086_741340	Banthracis_A0248_564986_741241
1	17681	1	17681	17681	17681	100.00	17681	17681	100.00	100.00	Banthracis_Ames_64594_82274	Banthracis_A0248_64494_82174
1	265	1	265	265	265	100.00	265	265	100.00	100.00	Banthracis_Ames_747182_747446	Banthracis_A0248_747083_747347
1	250	1	250	250	250	100.00	250	250	100.00	100.00	Banthracis_Ames_747614_747863	Banthracis_A0248_747515_747764
1	132190	1	132190	132190	132190	100.00	132190	132190	100.00	100.00	Banthracis_Ames_748105_880294	Banthracis_A0248_748006_880195
1	58042	1	58042	58042	58042	100.00	58042	58042	100.00	100.00	Banthracis_Ames_87250_145291	Banthracis_A0248_87150_145191
1	260747	1	260746	260747	260746	99.99	282393	282514	92.33	92.29	Banthracis_Ames_890495_1172887	Banthracis_A0248_890396_1172909
260733	282393	260854	282514	21661	21661	100.00	282393	282514	7.67	7.67	Banthracis_Ames_890495_1172887	Banthracis_A0248_890396_1172909