/users/252891/scratch/edge/database/bacillus/results/Banthracis_Ames_norepeats.fna /users/252891/scratch/edge/database/bacillus/results/Banthracis_CDC_684_norepeats.fna
NUCMER

[S1]	[E1]	[S2]	[E2]	[LEN 1]	[LEN 2]	[% IDY]	[LEN R]	[LEN Q]	[COV R]	[COV Q]	[TAGS]
1	499356	499335	1	499356	499335	99.97	499357	531013	100.00	94.03	Banthracis_Ames_1183423_1682779	Banthracis_CDC_684_2556315_3087327
1	7417	1	7416	7417	7416	99.97	7417	7416	100.00	100.00	Banthracis_Ames_14354_21770	Banthracis_CDC_684_14228_21643
1	99	1	99	99	99	100.00	99	99	100.00	100.00	Banthracis_Ames_150395_150493	Banthracis_CDC_684_150268_150366
1	75538	1	75560	75538	75560	99.90	94029	94509	80.33	79.95	Banthracis_Ames_150976_245004	Banthracis_CDC_684_150849_245357
75280	94029	75759	94509	18750	18751	99.98	94029	94509	19.94	19.84	Banthracis_Ames_150976_245004	Banthracis_CDC_684_150849_245357
1	322392	322362	1	322392	322362	99.98	369668	322363	87.21	100.00	Banthracis_Ames_1684258_2053925	Banthracis_CDC_684_2232474_2554836
330391	369667	39277	1	39277	39277	99.98	369668	39277	10.62	100.00	Banthracis_Ames_1684258_2053925	Banthracis_CDC_684_2185200_2224476
1	126	20246	20371	126	126	100.00	9162	20371	1.38	0.62	Banthracis_Ames_1_9162	Banthracis_CDC_684_5209745_5230116
127	9162	1	9036	9036	9036	99.99	9162	9036	98.62	100.00	Banthracis_Ames_1_9162	Banthracis_CDC_684_1_9036
1	5303	5303	1	5303	5303	100.00	5304	5304	99.98	99.98	Banthracis_Ames_2054239_2059542	Banthracis_CDC_684_2179583_2184886
1	119977	669747	549771	119977	119977	99.99	669204	669748	17.93	17.91	Banthracis_Ames_2059856_2729059	Banthracis_CDC_684_1509522_2179269
119802	220982	549911	448731	101181	101181	99.98	669204	669748	15.12	15.11	Banthracis_Ames_2059856_2729059	Banthracis_CDC_684_1509522_2179269
220653	474123	448979	195472	253471	253508	99.95	669204	669748	37.88	37.85	Banthracis_Ames_2059856_2729059	Banthracis_CDC_684_1509522_2179269
474118	669185	195070	1	195068	195070	99.98	669204	669748	29.15	29.13	Banthracis_Ames_2059856_2729059	Banthracis_CDC_684_1509522_2179269
1	7106	1	7106	7106	7106	100.00	7106	7106	100.00	100.00	Banthracis_Ames_21861_28966	Banthracis_CDC_684_21734_28839
1	183	1	183	183	183	100.00	183	183	100.00	100.00	Banthracis_Ames_245084_245266	Banthracis_CDC_684_245437_245619
1	81	1	81	81	81	97.53	81	81	100.00	100.00	Banthracis_Ames_245467_245547	Banthracis_CDC_684_245820_245900
1	432	1	432	432	432	100.00	432	432	100.00	100.00	Banthracis_Ames_245704_246135	Banthracis_CDC_684_246057_246488
1	15389	1	15389	15389	15389	99.99	15389	15389	100.00	100.00	Banthracis_Ames_251170_266558	Banthracis_CDC_684_251523_266911
1	8256	1	8256	8256	8256	99.96	8256	8256	100.00	100.00	Banthracis_Ames_271606_279861	Banthracis_CDC_684_271959_280214
1	145393	145399	1	145393	145399	99.98	145394	145402	100.00	100.00	Banthracis_Ames_2736277_2881670	Banthracis_CDC_684_1356958_1502359
1	4919	1	4919	4919	4919	99.96	4919	4919	100.00	100.00	Banthracis_Ames_284913_289831	Banthracis_CDC_684_285266_290184
1	85621	85621	1	85621	85621	99.99	85622	85622	100.00	100.00	Banthracis_Ames_2883149_2968770	Banthracis_CDC_684_1269858_1355479
1	107660	1	107660	107660	107660	99.99	237351	121331	45.36	88.73	Banthracis_Ames_294883_532233	Banthracis_CDC_684_295236_416566
107650	121235	107746	121331	13586	13586	99.99	237351	121331	5.72	11.20	Banthracis_Ames_294883_532233	Banthracis_CDC_684_295236_416566
131383	161485	1	30108	30103	30108	99.67	237351	99662	12.68	30.21	Banthracis_Ames_294883_532233	Banthracis_CDC_684_426773_526434
159707	187242	78003	50469	27536	27535	99.99	237351	518101	11.60	5.31	Banthracis_Ames_294883_532233	Banthracis_CDC_684_3706985_4225085
187232	237350	50121	1	50119	50121	99.98	237351	518101	21.12	9.67	Banthracis_Ames_294883_532233	Banthracis_CDC_684_3706985_4225085
1	20197	743124	722935	20197	20190	99.96	774026	743125	2.61	2.72	Banthracis_Ames_2968910_3742935	Banthracis_CDC_684_526594_1269718
175	488414	742950	254694	488240	488257	99.98	774026	743125	63.08	65.70	Banthracis_Ames_2968910_3742935	Banthracis_CDC_684_526594_1269718
488368	743057	254701	1	254690	254701	99.98	774026	743125	32.90	34.27	Banthracis_Ames_2968910_3742935	Banthracis_CDC_684_526594_1269718
743143	774026	99662	68780	30884	30883	99.99	774026	99662	3.99	30.99	Banthracis_Ames_2968910_3742935	Banthracis_CDC_684_426773_526434
1	30269	1	30269	30269	30269	99.98	30358	30269	99.71	100.00	Banthracis_Ames_34156_64513	Banthracis_CDC_684_34029_64297
1	40254	68575	28328	40254	40248	99.94	490630	99662	8.20	40.38	Banthracis_Ames_3743336_4233965	Banthracis_CDC_684_426773_526434
38474	480325	76225	518101	441852	441877	99.95	490630	518101	90.06	85.29	Banthracis_Ames_3743336_4233965	Banthracis_CDC_684_3706985_4225085
490564	490630	1	67	67	67	100.00	490630	53593	0.01	0.13	Banthracis_Ames_3743336_4233965	Banthracis_CDC_684_4235324_4288916
1	112	151	262	112	112	94.64	112	53593	100.00	0.21	Banthracis_Ames_4234049_4234160	Banthracis_CDC_684_4235324_4288916
1	53337	268	53593	53337	53326	99.97	53337	53593	100.00	99.50	Banthracis_Ames_4234244_4287580	Banthracis_CDC_684_4235324_4288916
1	15908	1	15909	15908	15909	99.98	198732	201636	8.00	7.89	Banthracis_Ames_4287653_4486384	Banthracis_CDC_684_4288989_4490624
15870	45086	15929	45147	29217	29219	99.92	198732	201636	14.70	14.49	Banthracis_Ames_4287653_4486384	Banthracis_CDC_684_4288989_4490624
44864	74455	45105	74726	29592	29622	99.86	198732	201636	14.89	14.69	Banthracis_Ames_4287653_4486384	Banthracis_CDC_684_4288989_4490624
54471	85876	54712	86148	31406	31437	99.90	198732	201636	15.80	15.59	Banthracis_Ames_4287653_4486384	Banthracis_CDC_684_4288989_4490624
85908	180846	86142	181073	94939	94932	99.99	198732	201636	47.77	47.08	Banthracis_Ames_4287653_4486384	Banthracis_CDC_684_4288989_4490624
180816	198732	181003	198920	17917	17918	99.97	198732	201636	9.02	8.89	Banthracis_Ames_4287653_4486384	Banthracis_CDC_684_4288989_4490624
1	29389	124	29513	29389	29390	99.93	160636	161546	18.30	18.19	Banthracis_Ames_4489292_4649927	Banthracis_CDC_684_4490720_4652265
29439	33271	30445	34277	3833	3833	99.92	160636	161546	2.39	2.37	Banthracis_Ames_4489292_4649927	Banthracis_CDC_684_4490720_4652265
33033	119460	33961	120373	86428	86413	99.94	160636	161546	53.80	53.49	Banthracis_Ames_4489292_4649927	Banthracis_CDC_684_4490720_4652265
99422	160636	100349	161546	61215	61198	99.96	160636	161546	38.11	37.88	Banthracis_Ames_4489292_4649927	Banthracis_CDC_684_4490720_4652265
1	106	1	106	106	106	100.00	106	106	100.00	100.00	Banthracis_Ames_4650010_4650115	Banthracis_CDC_684_4652348_4652453
1	91	1	91	91	91	100.00	91	91	100.00	100.00	Banthracis_Ames_4650276_4650366	Banthracis_CDC_684_4652614_4652704
1	185	1	185	185	185	100.00	185	185	100.00	100.00	Banthracis_Ames_4650445_4650629	Banthracis_CDC_684_4652783_4652967
1	108	1	108	108	108	100.00	108	108	100.00	100.00	Banthracis_Ames_4650707_4650814	Banthracis_CDC_684_4653045_4653152
1	104	1	104	104	104	100.00	192	104	54.17	100.00	Banthracis_Ames_4650905_4651096	Banthracis_CDC_684_4653243_4653346
1	86	1	86	86	86	98.84	86	87	100.00	98.85	Banthracis_Ames_4651742_4651827	Banthracis_CDC_684_4654079_4654165
1	34585	1	34586	34585	34586	99.99	184763	184875	18.72	18.71	Banthracis_Ames_4656949_4841711	Banthracis_CDC_684_4659286_4844160
34578	184763	34690	184875	150186	150186	99.99	184763	184875	81.29	81.24	Banthracis_Ames_4656949_4841711	Banthracis_CDC_684_4659286_4844160
1	16567	1	16567	16567	16567	99.99	16567	16567	100.00	100.00	Banthracis_Ames_4841817_4858383	Banthracis_CDC_684_4844266_4860832
1	60989	1	60990	60989	60990	99.99	60989	60990	100.00	100.00	Banthracis_Ames_4858489_4919477	Banthracis_CDC_684_4860938_4921927
1	45223	1	45223	45223	45223	99.98	75513	75619	59.89	59.80	Banthracis_Ames_4920646_4996158	Banthracis_CDC_684_4923096_4998714
45216	75513	45323	75619	30298	30297	99.99	75513	75619	40.12	40.07	Banthracis_Ames_4920646_4996158	Banthracis_CDC_684_4923096_4998714
1	24919	1	24919	24919	24919	99.98	24919	24919	100.00	100.00	Banthracis_Ames_4997328_5022246	Banthracis_CDC_684_4999884_5024802
1	9241	1	9246	9241	9246	99.82	66008	66110	14.00	13.99	Banthracis_Ames_5022386_5088393	Banthracis_CDC_684_5024942_5091051
9087	66008	9189	66110	56922	56922	99.99	66008	66110	86.24	86.10	Banthracis_Ames_5022386_5088393	Banthracis_CDC_684_5024942_5091051
1	114711	1	114712	114711	114712	99.99	114711	114712	100.00	100.00	Banthracis_Ames_5092075_5206785	Banthracis_CDC_684_5094772_5209483
1	102	1	102	102	102	100.00	102	102	100.00	100.00	Banthracis_Ames_5206865_5206966	Banthracis_CDC_684_5209563_5209664
1	20247	1	20245	20247	20245	99.99	20247	20371	100.00	99.38	Banthracis_Ames_5207047_5227294	Banthracis_CDC_684_5209745_5230116
1	108	108	1	108	108	100.00	109	109	99.08	99.08	Banthracis_Ames_537348_537456	Banthracis_CDC_684_3701755_3701863
1	180	180	1	180	180	100.00	181	181	99.45	99.45	Banthracis_Ames_537802_537982	Banthracis_CDC_684_3701229_3701409
1	95	95	1	95	95	100.00	96	96	98.96	98.96	Banthracis_Ames_538069_538164	Banthracis_CDC_684_3701047_3701142
1	4611	4611	1	4611	4611	100.00	4612	4612	99.98	99.98	Banthracis_Ames_538460_543071	Banthracis_CDC_684_3696140_3700751
1	11648	11648	1	11648	11648	99.99	11649	11649	99.99	99.99	Banthracis_Ames_543144_554792	Banthracis_CDC_684_3684419_3696067
1	100441	176284	75813	100441	100472	99.96	176255	176284	56.99	56.99	Banthracis_Ames_565086_741340	Banthracis_CDC_684_3497842_3674125
80495	176254	95789	1	95760	95789	99.96	176255	176284	54.33	54.34	Banthracis_Ames_565086_741340	Banthracis_CDC_684_3497842_3674125
1	17681	1	17681	17681	17681	99.99	17681	17681	100.00	100.00	Banthracis_Ames_64594_82274	Banthracis_CDC_684_64467_82147
1	249	249	1	249	249	100.00	250	250	99.60	99.60	Banthracis_Ames_747614_747863	Banthracis_CDC_684_3491081_3491330
1	132189	132189	1	132189	132189	99.98	132190	132190	100.00	100.00	Banthracis_Ames_748105_880294	Banthracis_CDC_684_3358650_3490839
1	58042	1	58042	58042	58042	99.99	58042	58042	100.00	100.00	Banthracis_Ames_87250_145291	Banthracis_CDC_684_87123_145164
1	202266	202260	1	202266	202260	99.99	282393	202261	71.63	100.00	Banthracis_Ames_890495_1172887	Banthracis_CDC_684_3146189_3348449
202375	260747	58412	39	58373	58374	99.97	282393	58412	20.67	99.93	Banthracis_Ames_890495_1172887	Banthracis_CDC_684_3087589_3146000
260803	282393	531013	509422	21591	21592	99.99	282393	531013	7.65	4.07	Banthracis_Ames_890495_1172887	Banthracis_CDC_684_2556315_3087327