##gff-version 3
#!gff-spec-version 1.20
#!processor NCBI annotwriter
##sequence-region NC_011748.1 1 5154862
##species http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=585055
NC_011748.1	RefSeq	region	1	5154862	.	+	.	ID=id0;Dbxref=taxon:585055;Is_circular=true;gbkey=Src;genome=chromosome;mol_type=genomic DNA;strain=55989
NC_011748.1	RefSeq	gene	203	268	.	+	.	ID=gene0;Name=thrL;Dbxref=GeneID:7149501;gbkey=Gene;gene=thrL;locus_tag=EC55989_5066
NC_011748.1	RefSeq	CDS	203	268	.	+	0	ID=cds0;Name=YP_002401144.1;Parent=gene0;Note=involved in threonine biosynthesis%3B controls the expression of the thrLABC operon;Dbxref=Genbank:YP_002401144.1,GeneID:7149501;gbkey=CDS;product=thr operon leader peptide;protein_id=YP_002401144.1;transl_table=11
NC_011748.1	RefSeq	gene	349	2811	.	+	.	ID=gene1;Name=thrA;Dbxref=GeneID:7147797;gbkey=Gene;gene=thrA;locus_tag=EC55989_0002
NC_011748.1	RefSeq	CDS	349	2811	.	+	0	ID=cds1;Name=YP_002401145.1;Parent=gene1;Note=multifunctional homotetrameric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine%3B functions in a number of amino acid biosynthetic pathways;Dbxref=Genbank:YP_002401145.1,GeneID:7147797;gbkey=CDS;product=bifunctional aspartokinase I%2Fhomoserine dehydrogenase I;protein_id=YP_002401145.1;transl_table=11
NC_011748.1	RefSeq	gene	2813	3745	.	+	.	ID=gene2;Name=thrB;Dbxref=GeneID:7147794;gbkey=Gene;gene=thrB;locus_tag=EC55989_0003
NC_011748.1	RefSeq	CDS	2813	3745	.	+	0	ID=cds2;Name=YP_002401146.1;Parent=gene2;Note=catalyzes the formation of O-phospho-L-homoserine from L-homoserine in threonine biosynthesis from asparate;Dbxref=Genbank:YP_002401146.1,GeneID:7147794;gbkey=CDS;product=homoserine kinase;protein_id=YP_002401146.1;transl_table=11
NC_011748.1	RefSeq	gene	3746	5032	.	+	.	ID=gene3;Name=thrC;Dbxref=GeneID:7147795;gbkey=Gene;gene=thrC;locus_tag=EC55989_0004
NC_011748.1	RefSeq	CDS	3746	5032	.	+	0	ID=cds3;Name=YP_002401147.1;Parent=gene3;Note=catalyzes the formation of L-threonine from O-phospho-L-homoserine;Dbxref=Genbank:YP_002401147.1,GeneID:7147795;gbkey=CDS;product=threonine synthase;protein_id=YP_002401147.1;transl_table=11
NC_011748.1	RefSeq	gene	5246	5542	.	+	.	ID=gene4;Name=yaaX;Dbxref=GeneID:7147796;gbkey=Gene;gene=yaaX;locus_tag=EC55989_0005
NC_011748.1	RefSeq	CDS	5246	5542	.	+	0	ID=cds4;Name=YP_002401148.1;Parent=gene4;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002401148.1,GeneID:7147796;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401148.1;transl_table=11
NC_011748.1	RefSeq	gene	5695	6471	.	-	.	ID=gene5;Name=yaaA;Dbxref=GeneID:7148007;gbkey=Gene;gene=yaaA;locus_tag=EC55989_0006
NC_011748.1	RefSeq	CDS	5695	6471	.	-	0	ID=cds5;Name=YP_002401149.1;Parent=gene5;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002401149.1,GeneID:7148007;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401149.1;transl_table=11
NC_011748.1	RefSeq	gene	6541	7971	.	-	.	ID=gene6;Name=yaaJ;Dbxref=GeneID:7148002;gbkey=Gene;gene=yaaJ;locus_tag=EC55989_0007
NC_011748.1	RefSeq	CDS	6541	7971	.	-	0	ID=cds6;Name=YP_002401150.1;Parent=gene6;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002401150.1,GeneID:7148002;gbkey=CDS;product=amino acid sodium%2Fproton transporter;protein_id=YP_002401150.1;transl_table=11
NC_011748.1	RefSeq	gene	8250	9203	.	+	.	ID=gene7;Name=talB;Dbxref=GeneID:7148005;gbkey=Gene;gene=talB;locus_tag=EC55989_0009
NC_011748.1	RefSeq	CDS	8250	9203	.	+	0	ID=cds7;Name=YP_002401151.1;Parent=gene7;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 8332529%2C 92334977%2C 11298760%2C 7592346%2C 8805555%2C 9007983%2C 9298646%3B Product type e : enzyme;Dbxref=Genbank:YP_002401151.1,GeneID:7148005;gbkey=CDS;product=transaldolase B;protein_id=YP_002401151.1;transl_table=11
NC_011748.1	RefSeq	gene	9318	9905	.	+	.	ID=gene8;Name=mogA;Dbxref=GeneID:7147748;gbkey=Gene;gene=mogA;locus_tag=EC55989_0010
NC_011748.1	RefSeq	CDS	9318	9905	.	+	0	ID=cds8;Name=YP_002401152.1;Parent=gene8;Note=forms a trimer%3B related to eukaryotic protein gephyrin%3B functions during molybdenum cofactor biosynthesis;Dbxref=Genbank:YP_002401152.1,GeneID:7147748;gbkey=CDS;product=molybdenum cofactor biosynthesis protein MogA;protein_id=YP_002401152.1;transl_table=11
NC_011748.1	RefSeq	gene	9940	10506	.	-	.	ID=gene9;Name=yaaH;Dbxref=GeneID:7146886;gbkey=Gene;gene=yaaH;locus_tag=EC55989_0011
NC_011748.1	RefSeq	CDS	9940	10506	.	-	0	ID=cds9;Name=YP_002401153.1;Parent=gene9;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002401153.1,GeneID:7146886;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401153.1;transl_table=11
NC_011748.1	RefSeq	gene	10655	11368	.	-	.	ID=gene10;Name=htpY;Dbxref=GeneID:7148003;gbkey=Gene;gene=htpY;locus_tag=EC55989_0012
NC_011748.1	RefSeq	CDS	10655	11368	.	-	0	ID=cds10;Name=YP_002401154.1;Parent=gene10;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 8478327%3B Product type r : regulator;Dbxref=Genbank:YP_002401154.1,GeneID:7148003;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401154.1;transl_table=11
NC_011748.1	RefSeq	gene	11394	11798	.	-	.	ID=gene11;Name=yaaI;Dbxref=GeneID:7146475;gbkey=Gene;gene=yaaI;locus_tag=EC55989_0013
NC_011748.1	RefSeq	CDS	11394	11798	.	-	0	ID=cds11;Name=YP_002401155.1;Parent=gene11;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002401155.1,GeneID:7146475;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401155.1;transl_table=11
NC_011748.1	RefSeq	gene	12175	14091	.	+	.	ID=gene12;Name=dnaK;Dbxref=GeneID:7148004;gbkey=Gene;gene=dnaK;locus_tag=EC55989_0014
NC_011748.1	RefSeq	CDS	12175	14091	.	+	0	ID=cds12;Name=YP_002401156.1;Parent=gene12;Note=heat shock protein 70%3B assists in folding of nascent polypeptide chains%3B refolding of misfolded proteins%3B utilizes ATPase activity to help fold%3B co-chaperones are DnaJ and GrpE%3B multiple copies in some bacteria;Dbxref=Genbank:YP_002401156.1,GeneID:7148004;gbkey=CDS;product=molecular chaperone DnaK;protein_id=YP_002401156.1;transl_table=11
NC_011748.1	RefSeq	gene	14092	14180	.	+	.	ID=gene13;Name=tpke11;Dbxref=GeneID:7145938;gbkey=Gene;gene=tpke11;locus_tag=EC55989_misc_RNA_1
NC_011748.1	RefSeq	transcript	14092	14180	.	+	.	ID=rna0;Parent=gene13;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 11553332%3B Product type n : RNA;Dbxref=GeneID:7145938;gbkey=misc_RNA;product=tpke11
NC_011748.1	RefSeq	exon	14092	14180	.	+	.	ID=id1;Parent=rna0;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 11553332%3B Product type n : RNA;Dbxref=GeneID:7145938;gbkey=misc_RNA;product=tpke11
NC_011748.1	RefSeq	gene	14180	15310	.	+	.	ID=gene14;Name=dnaJ;Dbxref=GeneID:7147831;gbkey=Gene;gene=dnaJ;locus_tag=EC55989_0015
NC_011748.1	RefSeq	CDS	14180	15310	.	+	0	ID=cds13;Name=YP_002401157.1;Parent=gene14;Note=chaperone Hsp40%3B co-chaperone with DnaK%3B Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins%2C also in an autonomous%2C dnaK-independent fashion;Dbxref=Genbank:YP_002401157.1,GeneID:7147831;gbkey=CDS;product=molecular chaperone DnaJ;protein_id=YP_002401157.1;transl_table=11
NC_011748.1	RefSeq	gene	15615	15669	.	+	.	ID=gene15;Name=sokC;Dbxref=GeneID:7145937;gbkey=Gene;gene=sokC;locus_tag=EC55989_misc_RNA_2
NC_011748.1	RefSeq	transcript	15615	15669	.	+	.	ID=rna1;Parent=gene15;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 10361310%3B Product type n : RNA;Dbxref=GeneID:7145937;gbkey=misc_RNA;product=SokC
NC_011748.1	RefSeq	exon	15615	15669	.	+	.	ID=id2;Parent=rna1;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 10361310%3B Product type n : RNA;Dbxref=GeneID:7145937;gbkey=misc_RNA;product=SokC
NC_011748.1	RefSeq	gene	16152	17318	.	+	.	ID=gene16;Name=nhaA;Dbxref=GeneID:7147677;gbkey=Gene;gene=nhaA;locus_tag=EC55989_0016
NC_011748.1	RefSeq	CDS	16152	17318	.	+	0	ID=cds14;Name=YP_002401158.1;Parent=gene16;Note=exports sodium by using the electrochemical proton gradient to allow protons into the cell%3B functions in adaptation to high salinity and alkaline pH%3B activity increases at higher pH%3B downregulated at acidic pH;Dbxref=Genbank:YP_002401158.1,GeneID:7147677;gbkey=CDS;product=pH-dependent sodium%2Fproton antiporter;protein_id=YP_002401158.1;transl_table=11
NC_011748.1	RefSeq	gene	17378	18283	.	+	.	ID=gene17;Name=nhaR;Dbxref=GeneID:7146991;gbkey=Gene;gene=nhaR;locus_tag=EC55989_0017
NC_011748.1	RefSeq	CDS	17378	18283	.	+	0	ID=cds15;Name=YP_002401159.1;Parent=gene17;Note=Na%2B%2FH%2B antiporter regulatory protein%3B activates the genes nhaA and osmC;Dbxref=Genbank:YP_002401159.1,GeneID:7146991;gbkey=CDS;product=transcriptional activator NhaR;protein_id=YP_002401159.1;transl_table=11
NC_011748.1	RefSeq	gene	18322	19281	.	-	.	ID=gene18;Name=EC55989_0018;Dbxref=GeneID:7146993;gbkey=Gene;locus_tag=EC55989_0018
NC_011748.1	RefSeq	CDS	18322	19281	.	-	0	ID=cds16;Name=YP_002401160.1;Parent=gene18;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002401160.1,GeneID:7146993;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401160.1;transl_table=11
NC_011748.1	RefSeq	gene	19294	20463	.	-	.	ID=gene19;Name=EC55989_0019;Dbxref=GeneID:7144357;gbkey=Gene;locus_tag=EC55989_0019;pseudo=true
NC_011748.1	RefSeq	region	19294	20463	.	-	.	ID=id3;Note=fragment of  fimbrial biogenesis outer membrane usher protein %28partial%29%3BEvidence 7 : Gene remnant%3B Product type pm :  membrane component;Dbxref=GeneID:7144357;gbkey=misc_feature
NC_011748.1	RefSeq	gene	20872	21993	.	-	.	ID=gene20;Name=EC55989_0020;Dbxref=GeneID:7144358;gbkey=Gene;locus_tag=EC55989_0020;pseudo=true
NC_011748.1	RefSeq	region	20872	21993	.	-	.	ID=id4;Note=fragment of conserved hypothetical protein %28partial%29%3BEvidence 7 : Gene remnant;Dbxref=GeneID:7144358;gbkey=misc_feature
NC_011748.1	RefSeq	gene	22776	23039	.	-	.	ID=gene21;Name=rpsT;Dbxref=GeneID:7144359;gbkey=Gene;gene=rpsT;locus_tag=EC55989_0022
NC_011748.1	RefSeq	CDS	22776	23039	.	-	0	ID=cds17;Name=YP_002401161.1;Parent=gene21;Note=binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase;Dbxref=Genbank:YP_002401161.1,GeneID:7144359;gbkey=CDS;product=30S ribosomal protein S20;protein_id=YP_002401161.1;transl_table=11
NC_011748.1	RefSeq	gene	23142	23360	.	+	.	ID=gene22;Name=yaaY;Dbxref=GeneID:7147524;gbkey=Gene;gene=yaaY;locus_tag=EC55989_0023
NC_011748.1	RefSeq	CDS	23142	23360	.	+	0	ID=cds18;Name=YP_002401162.1;Parent=gene22;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002401162.1,GeneID:7147524;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401162.1;transl_table=11
NC_011748.1	RefSeq	gene	23368	24309	.	+	.	ID=gene23;Name=ribF;Dbxref=GeneID:7148008;gbkey=Gene;gene=ribF;locus_tag=EC55989_0024
NC_011748.1	RefSeq	CDS	23368	24309	.	+	0	ID=cds19;Name=YP_002401163.1;Parent=gene23;Note=catalyzes the formation of FMN from riboflavin and the formation of FAD from FMN%3B in Bacillus the ribC gene has both flavokinase and FAD synthetase activities;Dbxref=Genbank:YP_002401163.1,GeneID:7148008;gbkey=CDS;product=bifunctional riboflavin kinase%2FFMN adenylyltransferase;protein_id=YP_002401163.1;transl_table=11
NC_011748.1	RefSeq	gene	24352	27168	.	+	.	ID=gene24;Name=ileS;Dbxref=GeneID:7147414;gbkey=Gene;gene=ileS;locus_tag=EC55989_0025
NC_011748.1	RefSeq	CDS	24352	27168	.	+	0	ID=cds20;Name=YP_002401164.1;Parent=gene24;Note=IleRS%3B catalyzes the formation of isoleucyl-tRNA%28Ile%29 from isoleucine and tRNA%28Ile%29%3B since isoleucine and other amino acids such as valine are similar%2C there are additional editing function in this enzyme%3B one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA%28Ile%29%3B there are two active sites%2C one for aminoacylation and one for editing%3B class-I aminoacyl-tRNA synthetase family type 1 subfamily%3B some organisms carry two different copies of this enzyme;Dbxref=Genbank:YP_002401164.1,GeneID:7147414;gbkey=CDS;product=isoleucyl-tRNA synthetase;protein_id=YP_002401164.1;transl_table=11
NC_011748.1	RefSeq	gene	27168	27662	.	+	.	ID=gene25;Name=lspA;Dbxref=GeneID:7146548;gbkey=Gene;gene=lspA;locus_tag=EC55989_0026
NC_011748.1	RefSeq	CDS	27168	27662	.	+	0	ID=cds21;Name=YP_002401165.1;Parent=gene25;Note=lipoprotein signal peptidase%3B integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis;Dbxref=Genbank:YP_002401165.1,GeneID:7146548;gbkey=CDS;product=lipoprotein signal peptidase;protein_id=YP_002401165.1;transl_table=11
NC_011748.1	RefSeq	gene	27750	28199	.	+	.	ID=gene26;Name=fkpB;Dbxref=GeneID:7146745;gbkey=Gene;gene=fkpB;locus_tag=EC55989_0027
NC_011748.1	RefSeq	CDS	27750	28199	.	+	0	ID=cds22;Name=YP_002401166.1;Parent=gene26;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 97332650%2C 2011499%3B Product type e : enzyme;Dbxref=Genbank:YP_002401166.1,GeneID:7146745;gbkey=CDS;product=FKBP-type peptidylprolyl isomerase;protein_id=YP_002401166.1;transl_table=11
NC_011748.1	RefSeq	gene	28201	29151	.	+	.	ID=gene27;Name=ispH;Dbxref=GeneID:7146121;gbkey=Gene;gene=ispH;locus_tag=EC55989_0028
NC_011748.1	RefSeq	CDS	28201	29151	.	+	0	ID=cds23;Name=YP_002401167.1;Parent=gene27;Note=catalyzes the conversion of 1-hydroxy-2-methyl-2-%28E%29-butenyl 4-diphosphate into isopentenyl diphosphate %28IPP%29 and dimethylallyl diphosphate %28DMAPP%29%3B functions in the nonmevalonate isoprenoid biosynthesis pathway;Dbxref=Genbank:YP_002401167.1,GeneID:7146121;gbkey=CDS;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=YP_002401167.1;transl_table=11
NC_011748.1	RefSeq	gene	29217	30131	.	+	.	ID=gene28;Name=rihC;Dbxref=GeneID:7146631;gbkey=Gene;gene=rihC;locus_tag=EC55989_0029
NC_011748.1	RefSeq	CDS	29217	30131	.	+	0	ID=cds24;Name=YP_002401168.1;Parent=gene28;Note=catalyzes the hydrolysis of both purine and pyrimidine ribonucleosides;Dbxref=Genbank:YP_002401168.1,GeneID:7146631;gbkey=CDS;product=ribonucleoside hydrolase RihC;protein_id=YP_002401168.1;transl_table=11
NC_011748.1	RefSeq	gene	30298	31119	.	+	.	ID=gene29;Name=dapB;Dbxref=GeneID:7147417;gbkey=Gene;gene=dapB;locus_tag=EC55989_0030
NC_011748.1	RefSeq	CDS	30298	31119	.	+	0	ID=cds25;Name=YP_002401169.1;Parent=gene29;Note=catalyzes the reduction of 2%2C3-dihydrodipicolinate to 2%2C3%2C4%2C5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis;Dbxref=Genbank:YP_002401169.1,GeneID:7147417;gbkey=CDS;product=dihydrodipicolinate reductase;protein_id=YP_002401169.1;transl_table=11
NC_011748.1	RefSeq	gene	31575	32723	.	+	.	ID=gene30;Name=carA;Dbxref=GeneID:7145850;gbkey=Gene;gene=carA;locus_tag=EC55989_0031
NC_011748.1	RefSeq	CDS	31575	32723	.	+	0	ID=cds26;Name=YP_002401170.1;Parent=gene30;Note=catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways%3B forms an octamer composed of four CarAB dimers;Dbxref=Genbank:YP_002401170.1,GeneID:7145850;gbkey=CDS;product=carbamoyl phosphate synthase small subunit;protein_id=YP_002401170.1;transl_table=11
NC_011748.1	RefSeq	gene	32741	35962	.	+	.	ID=gene31;Name=carB;Dbxref=GeneID:7145664;gbkey=Gene;gene=carB;locus_tag=EC55989_0032
NC_011748.1	RefSeq	CDS	32741	35962	.	+	0	ID=cds27;Name=YP_002401171.1;Parent=gene31;Note=four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate%3B CarB is responsible for the amidotransferase activity;Dbxref=Genbank:YP_002401171.1,GeneID:7145664;gbkey=CDS;product=carbamoyl phosphate synthase large subunit;protein_id=YP_002401171.1;transl_table=11
NC_011748.1	RefSeq	gene	35970	36188	.	-	.	ID=gene32;Name=EC55989_0033;Dbxref=GeneID:7145665;gbkey=Gene;locus_tag=EC55989_0033
NC_011748.1	RefSeq	CDS	35970	36188	.	-	0	ID=cds28;Name=YP_002401172.1;Parent=gene32;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 7815937%2C 6308632;Dbxref=Genbank:YP_002401172.1,GeneID:7145665;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401172.1;transl_table=11
NC_011748.1	RefSeq	gene	36223	36618	.	+	.	ID=gene33;Name=caiF;Dbxref=GeneID:7144360;gbkey=Gene;gene=caiF;locus_tag=EC55989_0034
NC_011748.1	RefSeq	CDS	36223	36618	.	+	0	ID=cds29;Name=YP_002401173.1;Parent=gene33;Note=regulator of carnitine metabolism%3B induces the caiTABCDE and fixABCX operons;Dbxref=Genbank:YP_002401173.1,GeneID:7144360;gbkey=CDS;product=DNA-binding transcriptional activator CaiF;protein_id=YP_002401173.1;transl_table=11
NC_011748.1	RefSeq	gene	36704	37294	.	-	.	ID=gene34;Name=caiE;Dbxref=GeneID:7145661;gbkey=Gene;gene=caiE;locus_tag=EC55989_0035
NC_011748.1	RefSeq	CDS	36704	37294	.	-	0	ID=cds30;Name=YP_002401174.1;Parent=gene34;Note=involved in the synthesis of a cofactor required for carnitine dehydratase and carnitine racemase activities;Dbxref=Genbank:YP_002401174.1,GeneID:7145661;gbkey=CDS;product=carnitine operon protein CaiE;protein_id=YP_002401174.1;transl_table=11
NC_011748.1	RefSeq	gene	37300	38085	.	-	.	ID=gene35;Name=caiD;Dbxref=GeneID:7145660;gbkey=Gene;gene=caiD;locus_tag=EC55989_0036
NC_011748.1	RefSeq	CDS	37300	38085	.	-	0	ID=cds31;Name=YP_002401175.2;Parent=gene35;Note=catalyzes the dehydration of L-carnitinyl-CoA to crotonobetainyl-CoA;Dbxref=Genbank:YP_002401175.2,GeneID:7145660;gbkey=CDS;product=carnitinyl-CoA dehydratase;protein_id=YP_002401175.2;transl_table=11
NC_011748.1	RefSeq	gene	38194	39762	.	-	.	ID=gene36;Name=caiC;Dbxref=GeneID:7145659;gbkey=Gene;gene=caiC;locus_tag=EC55989_0037
NC_011748.1	RefSeq	CDS	38194	39762	.	-	0	ID=cds32;Name=YP_002401176.1;Parent=gene36;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 15731894%2C 97189569%2C 7815937%3B Product type e : enzyme;Dbxref=Genbank:YP_002401176.1,GeneID:7145659;gbkey=CDS;product=crotonobetaine%2Fcarnitine-CoA ligase;protein_id=YP_002401176.1;transl_table=11
NC_011748.1	RefSeq	gene	39821	41038	.	-	.	ID=gene37;Name=caiB;Dbxref=GeneID:7145658;gbkey=Gene;gene=caiB;locus_tag=EC55989_0038
NC_011748.1	RefSeq	CDS	39821	41038	.	-	0	ID=cds33;Name=YP_002401177.1;Parent=gene37;Note=catalyzes formation of L-carnitinyl-CoA by transfering the CoA moiety from gamma-butyrobetainyl-CoA%2C also catalyzes the formation of crotonobetainyl-CoA by transfer of CoA from gamma-butyrobetainyl-CoA or L-carnitinyl-CoA to crotonobetaine;Dbxref=Genbank:YP_002401177.1,GeneID:7145658;gbkey=CDS;product=crotonobetainyl-CoA:carnitine CoA-transferase;protein_id=YP_002401177.1;transl_table=11
NC_011748.1	RefSeq	gene	41167	42309	.	-	.	ID=gene38;Name=caiA;Dbxref=GeneID:7145657;gbkey=Gene;gene=caiA;locus_tag=EC55989_0039
NC_011748.1	RefSeq	CDS	41167	42309	.	-	0	ID=cds34;Name=YP_002401178.1;Parent=gene38;Note=catalyzes the reduction of crotonobetainyl-CoA to gamma-butyrobetainyl-CoA;Dbxref=Genbank:YP_002401178.1,GeneID:7145657;gbkey=CDS;product=crotonobetainyl-CoA dehydrogenase;protein_id=YP_002401178.1;transl_table=11
NC_011748.1	RefSeq	gene	42340	43854	.	-	.	ID=gene39;Name=caiT;Dbxref=GeneID:7145656;gbkey=Gene;gene=caiT;locus_tag=EC55989_0040
NC_011748.1	RefSeq	CDS	42340	43854	.	-	0	ID=cds35;Name=YP_002401179.1;Parent=gene39;Note=catalyzes the exchange of L-carnitine for gamma-butyrobetaine in carnitine metabolism;Dbxref=Genbank:YP_002401179.1,GeneID:7145656;gbkey=CDS;product=L-carnitine%2Fgamma-butyrobetaine antiporter;protein_id=YP_002401179.1;transl_table=11
NC_011748.1	RefSeq	gene	44328	45098	.	+	.	ID=gene40;Name=fixA;Dbxref=GeneID:7145662;gbkey=Gene;gene=fixA;locus_tag=EC55989_0041
NC_011748.1	RefSeq	CDS	44328	45098	.	+	0	ID=cds36;Name=YP_002401180.1;Parent=gene40;Note=required for anaerobic carnitine reduction%2C may act to transfer electrons to crotonobetaine reductase;Dbxref=Genbank:YP_002401180.1,GeneID:7145662;gbkey=CDS;product=electron transfer flavoprotein FixA;protein_id=YP_002401180.1;transl_table=11
NC_011748.1	RefSeq	gene	45113	46054	.	+	.	ID=gene41;Name=fixB;Dbxref=GeneID:7146115;gbkey=Gene;gene=fixB;locus_tag=EC55989_0042
NC_011748.1	RefSeq	CDS	45113	46054	.	+	0	ID=cds37;Name=YP_002401181.1;Parent=gene41;Note=involved in electron transfer during carnitine metabolism;Dbxref=Genbank:YP_002401181.1,GeneID:7146115;gbkey=CDS;product=electron transfer flavoprotein FixB;protein_id=YP_002401181.1;transl_table=11
NC_011748.1	RefSeq	gene	46105	47391	.	+	.	ID=gene42;Name=fixC;Dbxref=GeneID:7146116;gbkey=Gene;gene=fixC;locus_tag=EC55989_0043
NC_011748.1	RefSeq	CDS	46105	47391	.	+	0	ID=cds38;Name=YP_002401182.1;Parent=gene42;Note=FAD%2FNAD%28P%29-binding domain%3B possibly part of an electron transfer system required for anaerobic carnitine reduction;Dbxref=Genbank:YP_002401182.1,GeneID:7146116;gbkey=CDS;product=oxidoreductase FixC;protein_id=YP_002401182.1;transl_table=11
NC_011748.1	RefSeq	gene	47388	47675	.	+	.	ID=gene43;Name=fixX;Dbxref=GeneID:7146117;gbkey=Gene;gene=fixX;locus_tag=EC55989_0044
NC_011748.1	RefSeq	CDS	47388	47675	.	+	0	ID=cds39;Name=YP_002401183.1;Parent=gene43;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 96066354%2C 12081978%3B Product type pc :  carrier;Dbxref=Genbank:YP_002401183.1,GeneID:7146117;gbkey=CDS;product=4Fe-4S ferredoxin;protein_id=YP_002401183.1;transl_table=11
NC_011748.1	RefSeq	gene	47734	49065	.	+	.	ID=gene44;Name=yaaU;Dbxref=GeneID:7146118;gbkey=Gene;gene=yaaU;locus_tag=EC55989_0045
NC_011748.1	RefSeq	CDS	47734	49065	.	+	0	ID=cds40;Name=YP_002401184.1;Parent=gene44;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002401184.1,GeneID:7146118;gbkey=CDS;product=transporter;protein_id=YP_002401184.1;transl_table=11
NC_011748.1	RefSeq	gene	49173	49703	.	+	.	ID=gene45;Name=kefF;Dbxref=GeneID:7148006;gbkey=Gene;gene=kefF;locus_tag=EC55989_0046
NC_011748.1	RefSeq	CDS	49173	49703	.	+	0	ID=cds41;Name=YP_002401185.1;Parent=gene45;Note=Required for full activity of KefC%2C a potassium-proton antiporter;Dbxref=Genbank:YP_002401185.1,GeneID:7148006;gbkey=CDS;product=glutathione-regulated potassium-efflux system ancillary protein KefF;protein_id=YP_002401185.1;transl_table=11
NC_011748.1	RefSeq	gene	49696	51558	.	+	.	ID=gene46;Name=kefC;Dbxref=GeneID:7146669;gbkey=Gene;gene=kefC;locus_tag=EC55989_0047
NC_011748.1	RefSeq	CDS	49696	51558	.	+	0	ID=cds42;Name=YP_002401186.1;Parent=gene46;Note=transport system that facilitates potassium-efflux;Dbxref=Genbank:YP_002401186.1,GeneID:7146669;gbkey=CDS;product=glutathione-regulated potassium-efflux system protein KefC;protein_id=YP_002401186.1;transl_table=11
NC_011748.1	RefSeq	gene	51750	52229	.	+	.	ID=gene47;Name=folA;Dbxref=GeneID:7146668;gbkey=Gene;gene=folA;locus_tag=EC55989_0048
NC_011748.1	RefSeq	CDS	51750	52229	.	+	0	ID=cds43;Name=YP_002401187.1;Parent=gene47;Note=catalyzes the reduction of dihydrofolate to tetrahydrofolate;Dbxref=Genbank:YP_002401187.1,GeneID:7146668;gbkey=CDS;product=dihydrofolate reductase;protein_id=YP_002401187.1;transl_table=11
NC_011748.1	RefSeq	gene	52307	53149	.	-	.	ID=gene48;Name=apaH;Dbxref=GeneID:7146168;gbkey=Gene;gene=apaH;locus_tag=EC55989_0049
NC_011748.1	RefSeq	CDS	52307	53149	.	-	0	ID=cds44;Name=YP_002401188.1;Parent=gene48;Note=hydrolyzes P%281%29%2CP%284%29-bis%285%27-adenosyl%29 tetraphosphate to form 2 ADP;Dbxref=Genbank:YP_002401188.1,GeneID:7146168;gbkey=CDS;product=diadenosine tetraphosphatase;protein_id=YP_002401188.1;transl_table=11
NC_011748.1	RefSeq	gene	53156	53533	.	-	.	ID=gene49;Name=apaG;Dbxref=GeneID:7145506;gbkey=Gene;gene=apaG;locus_tag=EC55989_0050
NC_011748.1	RefSeq	CDS	53156	53533	.	-	0	ID=cds45;Name=YP_002401189.1;Parent=gene49;Note=protein associated with Co2%2B and Mg2%2B efflux;Dbxref=Genbank:YP_002401189.1,GeneID:7145506;gbkey=CDS;product=ApaG protein;protein_id=YP_002401189.1;transl_table=11
NC_011748.1	RefSeq	gene	53536	54357	.	-	.	ID=gene50;Name=ksgA;Dbxref=GeneID:7145505;gbkey=Gene;gene=ksgA;locus_tag=EC55989_0051
NC_011748.1	RefSeq	CDS	53536	54357	.	-	0	ID=cds46;Name=YP_002401190.1;Parent=gene50;Note=catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine %28S-AdoMet%29 to two adjacent adenosine bases A1518 and A1519 in 16S rRNA%3B mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin;Dbxref=Genbank:YP_002401190.1,GeneID:7145505;gbkey=CDS;product=dimethyladenosine transferase;protein_id=YP_002401190.1;transl_table=11
NC_011748.1	RefSeq	gene	54354	55343	.	-	.	ID=gene51;Name=pdxA;Dbxref=GeneID:7146673;gbkey=Gene;gene=pdxA;locus_tag=EC55989_0052
NC_011748.1	RefSeq	CDS	54354	55343	.	-	0	ID=cds47;Name=YP_002401191.1;Parent=gene51;Note=catalyzes oxidation of 4-%28phosphohydroxy%29-L-threonine into 2-amino-3-oxo-4-%28phosphohydroxy%29butyric acid which decarboxylates to form 1-amino-3-%28phosphohydroxy%29propan-2-one %283-amino-2-oxopropyl phosphate%29;Dbxref=Genbank:YP_002401191.1,GeneID:7146673;gbkey=CDS;product=4-hydroxythreonine-4-phosphate dehydrogenase;protein_id=YP_002401191.1;transl_table=11
NC_011748.1	RefSeq	gene	55343	56629	.	-	.	ID=gene52;Name=surA;Dbxref=GeneID:7147124;gbkey=Gene;gene=surA;locus_tag=EC55989_0053
NC_011748.1	RefSeq	CDS	55343	56629	.	-	0	ID=cds48;Name=YP_002401192.1;Parent=gene52;Note=Chaperone involved in the folding of extracytoplasmic proteins%2C especially OmpA%2C OmpF and LamB;Dbxref=Genbank:YP_002401192.1,GeneID:7147124;gbkey=CDS;product=peptidyl-prolyl cis-trans isomerase SurA;protein_id=YP_002401192.1;transl_table=11
NC_011748.1	RefSeq	gene	56682	59036	.	-	.	ID=gene53;Name=imp;Dbxref=GeneID:7147740;gbkey=Gene;gene=imp;locus_tag=EC55989_0054
NC_011748.1	RefSeq	CDS	56682	59036	.	-	0	ID=cds49;Name=YP_002401193.1;Parent=gene53;Note=determines N-hexane tolerance and is involved in outer membrane permeability;Dbxref=Genbank:YP_002401193.1,GeneID:7147740;gbkey=CDS;product=organic solvent tolerance protein;protein_id=YP_002401193.1;transl_table=11
NC_011748.1	RefSeq	gene	59291	60106	.	+	.	ID=gene54;Name=djlA;Dbxref=GeneID:7146563;gbkey=Gene;gene=djlA;locus_tag=EC55989_0055
NC_011748.1	RefSeq	CDS	59291	60106	.	+	0	ID=cds50;Name=YP_002401194.1;Parent=gene54;Note=functions as a co-chaperone with DnaK%3B involved in regulation of colanic acid capsule%3B inner membrane protein%3B dimerized via transmembrane domain%3B J-like domain is cytoplasmic and can functionally substitute for DnaJ%3B stimulates synthesis of colanic acid mucoid capsule through the RcsB%2FC signal transduction system;Dbxref=Genbank:YP_002401194.1,GeneID:7146563;gbkey=CDS;product=Dna-J like membrane chaperone protein;protein_id=YP_002401194.1;transl_table=11
NC_011748.1	RefSeq	gene	60223	60882	.	-	.	ID=gene55;Name=rluA;Dbxref=GeneID:7145921;gbkey=Gene;gene=rluA;locus_tag=EC55989_0056
NC_011748.1	RefSeq	CDS	60223	60882	.	-	0	ID=cds51;Name=YP_002401195.1;Parent=gene55;Note=catalyzes the synthesis of pseudouridine from uracil-746 in 23S ribosomal RNA and from uracil-32 in the anticodon stem and loop of transfer RNAs;Dbxref=Genbank:YP_002401195.1,GeneID:7145921;gbkey=CDS;product=23S rRNA%2FtRNA pseudouridine synthase A;protein_id=YP_002401195.1;transl_table=11
NC_011748.1	RefSeq	gene	60894	63800	.	-	.	ID=gene56;Name=hepA;Dbxref=GeneID:7147426;gbkey=Gene;gene=hepA;locus_tag=EC55989_0057
NC_011748.1	RefSeq	CDS	60894	63800	.	-	0	ID=cds52;Name=YP_002401196.1;Parent=gene56;Note=transcription regulator that activates transcription by stimulating RNA polymerase %28RNAP%29 recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP%2C when it is trapped or immobilized on tightly supercoiled DNA;Dbxref=Genbank:YP_002401196.1,GeneID:7147426;gbkey=CDS;product=ATP-dependent helicase HepA;protein_id=YP_002401196.1;transl_table=11
NC_011748.1	RefSeq	gene	63965	66316	.	-	.	ID=gene57;Name=polB;Dbxref=GeneID:7146419;gbkey=Gene;gene=polB;locus_tag=EC55989_0058
NC_011748.1	RefSeq	CDS	63965	66316	.	-	0	ID=cds53;Name=YP_002401197.1;Parent=gene57;Note=Has polymerase%2C DNA-binding and 3%27-5%27 exonuclease activities. In Aeropyrum pernix this protein is sensitive to aphidicolin and stable at 95%23C;Dbxref=Genbank:YP_002401197.1,GeneID:7146419;gbkey=CDS;product=DNA polymerase II;protein_id=YP_002401197.1;transl_table=11
NC_011748.1	RefSeq	gene	66391	67086	.	-	.	ID=gene58;Name=araD;Dbxref=GeneID:7147208;gbkey=Gene;gene=araD;locus_tag=EC55989_0059
NC_011748.1	RefSeq	CDS	66391	67086	.	-	0	ID=cds54;Name=YP_002401198.1;Parent=gene58;Note=catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate%3B links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source;Dbxref=Genbank:YP_002401198.1,GeneID:7147208;gbkey=CDS;product=L-ribulose-5-phosphate 4-epimerase;protein_id=YP_002401198.1;transl_table=11
NC_011748.1	RefSeq	gene	67255	68757	.	-	.	ID=gene59;Name=araA;Dbxref=GeneID:7145516;gbkey=Gene;gene=araA;locus_tag=EC55989_0060
NC_011748.1	RefSeq	CDS	67255	68757	.	-	0	ID=cds55;Name=YP_002401199.1;Parent=gene59;Note=catalyzes the formation of L-ribulose from L-arabinose in L-arabinose catabolism;Dbxref=Genbank:YP_002401199.1,GeneID:7145516;gbkey=CDS;product=L-arabinose isomerase;protein_id=YP_002401199.1;transl_table=11
NC_011748.1	RefSeq	gene	68768	70468	.	-	.	ID=gene60;Name=araB;Dbxref=GeneID:7145513;gbkey=Gene;gene=araB;locus_tag=EC55989_0061
NC_011748.1	RefSeq	CDS	68768	70468	.	-	0	ID=cds56;Name=YP_002401200.1;Parent=gene60;Note=catalyzes the phosphorylation of ribulose to ribulose 5-phosphate;Dbxref=Genbank:YP_002401200.1,GeneID:7145513;gbkey=CDS;product=ribulokinase;protein_id=YP_002401200.1;transl_table=11
NC_011748.1	RefSeq	gene	70807	71685	.	+	.	ID=gene61;Name=araC;Dbxref=GeneID:7145514;gbkey=Gene;gene=araC;locus_tag=EC55989_0062
NC_011748.1	RefSeq	CDS	70807	71685	.	+	0	ID=cds57;Name=YP_002401201.1;Parent=gene61;Note=positive and negative regulator%3B regulates the araBAD and araFGH operons and other genes involved in the transport and catabolism of L-arabinose;Dbxref=Genbank:YP_002401201.1,GeneID:7145514;gbkey=CDS;product=DNA-binding transcriptional regulator AraC;protein_id=YP_002401201.1;transl_table=11
NC_011748.1	RefSeq	gene	71771	72535	.	+	.	ID=gene62;Name=yabI;Dbxref=GeneID:7145515;gbkey=Gene;gene=yabI;locus_tag=EC55989_0063
NC_011748.1	RefSeq	CDS	71771	72535	.	+	0	ID=cds58;Name=YP_002401202.1;Parent=gene62;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002401202.1,GeneID:7145515;gbkey=CDS;product=inner membrane protein;protein_id=YP_002401202.1;transl_table=11
NC_011748.1	RefSeq	gene	72649	73347	.	-	.	ID=gene63;Name=thiQ;Dbxref=GeneID:7148009;gbkey=Gene;gene=thiQ;locus_tag=EC55989_0064
NC_011748.1	RefSeq	CDS	72649	73347	.	-	0	ID=cds59;Name=YP_002401203.1;Parent=gene63;Note=with TbpA and ThiP is part of the thiamine and TPP transport system;Dbxref=Genbank:YP_002401203.1,GeneID:7148009;gbkey=CDS;product=thiamine transporter ATP-binding subunit;protein_id=YP_002401203.1;transl_table=11
NC_011748.1	RefSeq	gene	73331	74941	.	-	.	ID=gene64;Name=thiP;Dbxref=GeneID:7147792;gbkey=Gene;gene=thiP;locus_tag=EC55989_0065
NC_011748.1	RefSeq	CDS	73331	74941	.	-	0	ID=cds60;Name=YP_002401204.1;Parent=gene64;Note=permease%3B with TbpA and ThiQ functions in transport of thiamine and thiamine pyrophosphate into the cell%3B repressed in presence of exogenous thiamine;Dbxref=Genbank:YP_002401204.1,GeneID:7147792;gbkey=CDS;product=thiamine transporter membrane protein;protein_id=YP_002401204.1;transl_table=11
NC_011748.1	RefSeq	gene	74917	75900	.	-	.	ID=gene65;Name=tbpA;Dbxref=GeneID:7147791;gbkey=Gene;gene=tbpA;locus_tag=EC55989_0066
NC_011748.1	RefSeq	CDS	74917	75900	.	-	0	ID=cds61;Name=YP_002401205.1;Parent=gene65;Note=part of the thiamine and TPP transport system tbpA-thiPQ;Dbxref=Genbank:YP_002401205.1,GeneID:7147791;gbkey=CDS;product=thiamine transporter substrate binding subunit;protein_id=YP_002401205.1;transl_table=11
NC_011748.1	RefSeq	gene	75931	76030	.	-	.	ID=gene66;Name=EC55989_misc_RNA_3;Dbxref=GeneID:7147762;gbkey=Gene;locus_tag=EC55989_misc_RNA_3
NC_011748.1	RefSeq	transcript	75931	76030	.	-	.	ID=rna2;Parent=gene66;Dbxref=GeneID:7147762;gbkey=misc_RNA;product=TPP
NC_011748.1	RefSeq	exon	75931	76030	.	-	.	ID=id5;Parent=rna2;Dbxref=GeneID:7147762;gbkey=misc_RNA;product=TPP
NC_011748.1	RefSeq	gene	76064	77719	.	-	.	ID=gene67;Name=sgrR;Dbxref=GeneID:7145304;gbkey=Gene;gene=sgrR;locus_tag=EC55989_0067
NC_011748.1	RefSeq	CDS	76064	77719	.	-	0	ID=cds62;Name=YP_002401206.1;Parent=gene67;Note=activates sgrS under glucose-phosphate stress conditions;Dbxref=Genbank:YP_002401206.1,GeneID:7145304;gbkey=CDS;product=transcriptional regulator SgrR;protein_id=YP_002401206.1;transl_table=11
NC_011748.1	RefSeq	gene	77787	78013	.	+	.	ID=gene68;Name=sgrS;Dbxref=GeneID:7147650;gbkey=Gene;gene=sgrS;locus_tag=EC55989_misc_RNA_4
NC_011748.1	RefSeq	transcript	77787	78013	.	+	.	ID=rna3;Parent=gene68;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 15522088%3B Product type n : RNA;Dbxref=GeneID:7147650;gbkey=misc_RNA;product=SgrS
NC_011748.1	RefSeq	exon	77787	78013	.	+	.	ID=id6;Parent=rna3;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 15522088%3B Product type n : RNA;Dbxref=GeneID:7147650;gbkey=misc_RNA;product=SgrS
NC_011748.1	RefSeq	gene	78041	79219	.	+	.	ID=gene69;Name=setA;Dbxref=GeneID:7147651;gbkey=Gene;gene=setA;locus_tag=EC55989_0068
NC_011748.1	RefSeq	CDS	78041	79219	.	+	0	ID=cds63;Name=YP_002401207.1;Parent=gene69;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 10438463%2C 10209755%3B Product type t : transporter;Dbxref=Genbank:YP_002401207.1,GeneID:7147651;gbkey=CDS;product=broad specificity sugar efflux system;protein_id=YP_002401207.1;transl_table=11
NC_011748.1	RefSeq	gene	79268	79873	.	-	.	ID=gene70;Name=leuD;Dbxref=GeneID:7147636;gbkey=Gene;gene=leuD;locus_tag=EC55989_0069
NC_011748.1	RefSeq	CDS	79268	79873	.	-	0	ID=cds64;Name=YP_002401208.1;Parent=gene70;Note=catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis%3B forms a heterodimer of LeuC%2FD;Dbxref=Genbank:YP_002401208.1,GeneID:7147636;gbkey=CDS;product=isopropylmalate isomerase small subunit;protein_id=YP_002401208.1;transl_table=11
NC_011748.1	RefSeq	gene	79884	81284	.	-	.	ID=gene71;Name=leuC;Dbxref=GeneID:7146692;gbkey=Gene;gene=leuC;locus_tag=EC55989_0070
NC_011748.1	RefSeq	CDS	79884	81284	.	-	0	ID=cds65;Name=YP_002401209.1;Parent=gene71;Note=dehydratase component%2C catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate;Dbxref=Genbank:YP_002401209.1,GeneID:7146692;gbkey=CDS;product=isopropylmalate isomerase large subunit;protein_id=YP_002401209.1;transl_table=11
NC_011748.1	RefSeq	gene	81287	82378	.	-	.	ID=gene72;Name=leuB;Dbxref=GeneID:7146691;gbkey=Gene;gene=leuB;locus_tag=EC55989_0071
NC_011748.1	RefSeq	CDS	81287	82378	.	-	0	ID=cds66;Name=YP_002401210.1;Parent=gene72;Note=catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis;Dbxref=Genbank:YP_002401210.1,GeneID:7146691;gbkey=CDS;product=3-isopropylmalate dehydrogenase;protein_id=YP_002401210.1;transl_table=11
NC_011748.1	RefSeq	gene	82378	83949	.	-	.	ID=gene73;Name=leuA;Dbxref=GeneID:7146690;gbkey=Gene;gene=leuA;locus_tag=EC55989_0072
NC_011748.1	RefSeq	CDS	82378	83949	.	-	0	ID=cds67;Name=YP_002401211.1;Parent=gene73;Note=catalyzes the formation of 2-isopropylmalate from acetyl-CoA and 2-oxoisovalerate in leucine biosynthesis;Dbxref=Genbank:YP_002401211.1,GeneID:7146690;gbkey=CDS;product=2-isopropylmalate synthase;protein_id=YP_002401211.1;transl_table=11
NC_011748.1	RefSeq	gene	83993	84142	.	-	.	ID=gene74;Name=EC55989_misc_RNA_5;Dbxref=GeneID:7146689;gbkey=Gene;locus_tag=EC55989_misc_RNA_5
NC_011748.1	RefSeq	transcript	83993	84142	.	-	.	ID=rna4;Parent=gene74;Dbxref=GeneID:7146689;gbkey=misc_RNA;product=Leu_leader
NC_011748.1	RefSeq	exon	83993	84142	.	-	.	ID=id7;Parent=rna4;Dbxref=GeneID:7146689;gbkey=misc_RNA;product=Leu_leader
NC_011748.1	RefSeq	gene	84042	84128	.	-	.	ID=gene75;Name=leuL;Dbxref=GeneID:7145306;gbkey=Gene;gene=leuL;locus_tag=EC55989_5067
NC_011748.1	RefSeq	CDS	84042	84128	.	-	0	ID=cds68;Name=YP_002401212.1;Parent=gene75;Note=involved in attenuation control of the leuABCD operon in leucine biosynthesis;Dbxref=Genbank:YP_002401212.1,GeneID:7145306;gbkey=CDS;product=leu operon leader peptide;protein_id=YP_002401212.1;transl_table=11
NC_011748.1	RefSeq	gene	84788	85732	.	+	.	ID=gene76;Name=leuO;Dbxref=GeneID:7146693;gbkey=Gene;gene=leuO;locus_tag=EC55989_0073
NC_011748.1	RefSeq	CDS	84788	85732	.	+	0	ID=cds69;Name=YP_002401213.1;Parent=gene76;Note=activator for leuABCD operon%3B member of LysR family of transcriptional activators;Dbxref=Genbank:YP_002401213.1,GeneID:7146693;gbkey=CDS;product=leucine transcriptional activator;protein_id=YP_002401213.1;transl_table=11
NC_011748.1	RefSeq	gene	86050	87774	.	+	.	ID=gene77;Name=ilvI;Dbxref=GeneID:7146694;gbkey=Gene;gene=ilvI;locus_tag=EC55989_0074
NC_011748.1	RefSeq	CDS	86050	87774	.	+	0	ID=cds70;Name=YP_002401214.1;Parent=gene77;Note=catalyzes the formation of 2-acetolactate from pyruvate%2C leucine sensitive;Dbxref=Genbank:YP_002401214.1,GeneID:7146694;gbkey=CDS;product=acetolactate synthase 3 catalytic subunit;protein_id=YP_002401214.1;transl_table=11
NC_011748.1	RefSeq	gene	87777	88268	.	+	.	ID=gene78;Name=ilvH;Dbxref=GeneID:7146556;gbkey=Gene;gene=ilvH;locus_tag=EC55989_0075
NC_011748.1	RefSeq	CDS	87777	88268	.	+	0	ID=cds71;Name=YP_002401215.1;Parent=gene78;Note=with IlvI catalyzes the formation of 2-acetolactate from pyruvate%2C the small subunit is required for full activity and valine sensitivity%3B E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates%2C valine sensitivity and affinity for cofactors%3B also known as acetolactate synthase 3 small subunit;Dbxref=Genbank:YP_002401215.1,GeneID:7146556;gbkey=CDS;product=acetolactate synthase 3 regulatory subunit;protein_id=YP_002401215.1;transl_table=11
NC_011748.1	RefSeq	gene	88448	89452	.	+	.	ID=gene79;Name=fruR;Dbxref=GeneID:7146555;gbkey=Gene;gene=fruR;locus_tag=EC55989_0076
NC_011748.1	RefSeq	CDS	88448	89452	.	+	0	ID=cds72;Name=YP_002401216.1;Parent=gene79;Note=binds D-fructose as an inducer%3B involved in regulation of operons for central pathways of carbon metabolism;Dbxref=Genbank:YP_002401216.1,GeneID:7146555;gbkey=CDS;product=DNA-binding transcriptional regulator FruR;protein_id=YP_002401216.1;transl_table=11
NC_011748.1	RefSeq	gene	90054	90512	.	+	.	ID=gene80;Name=mraZ;Dbxref=GeneID:7146198;gbkey=Gene;gene=mraZ;locus_tag=EC55989_0077
NC_011748.1	RefSeq	CDS	90054	90512	.	+	0	ID=cds73;Name=YP_002401217.1;Parent=gene80;Note=MraZ%3B UPF0040%3B crystal structure shows similarity to AbrB;Dbxref=Genbank:YP_002401217.1,GeneID:7146198;gbkey=CDS;product=cell division protein MraZ;protein_id=YP_002401217.1;transl_table=11
NC_011748.1	RefSeq	gene	90514	91455	.	+	.	ID=gene81;Name=mraW;Dbxref=GeneID:7146897;gbkey=Gene;gene=mraW;locus_tag=EC55989_0078
NC_011748.1	RefSeq	CDS	90514	91455	.	+	0	ID=cds74;Name=YP_002401218.1;Parent=gene81;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 20042184%2C 10493123%2C 2187182%2C 6350821%3B Product type e : enzyme;Dbxref=Genbank:YP_002401218.1,GeneID:7146897;gbkey=CDS;product=S-adenosyl-methyltransferase MraW;protein_id=YP_002401218.1;transl_table=11
NC_011748.1	RefSeq	gene	91452	91817	.	+	.	ID=gene82;Name=ftsL;Dbxref=GeneID:7146895;gbkey=Gene;gene=ftsL;locus_tag=EC55989_0079
NC_011748.1	RefSeq	CDS	91452	91817	.	+	0	ID=cds75;Name=YP_002401219.1;Parent=gene82;Note=membrane bound cell division protein at septum containing leucine zipper motif;Dbxref=Genbank:YP_002401219.1,GeneID:7146895;gbkey=CDS;product=cell division protein FtsL;protein_id=YP_002401219.1;transl_table=11
NC_011748.1	RefSeq	gene	91833	93599	.	+	.	ID=gene83;Name=ftsI;Dbxref=GeneID:7146216;gbkey=Gene;gene=ftsI;locus_tag=EC55989_0080
NC_011748.1	RefSeq	CDS	91833	93599	.	+	0	ID=cds76;Name=YP_002401220.1;Parent=gene83;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 91072213%2C 92202178%2C 94095121%2C 9603865%2C 9614966%2C 1332942%2C 1447153%2C 2198024%2C 2677607%2C 2681146%2C 3049550%2C 3911028%2C 6350821%3B Product type e : enzyme;Dbxref=Genbank:YP_002401220.1,GeneID:7146216;gbkey=CDS;product=transpeptidase involved in septal peptidoglycan synthesis %28penicillin-binding protein 3%29;protein_id=YP_002401220.1;transl_table=11
NC_011748.1	RefSeq	gene	93586	95073	.	+	.	ID=gene84;Name=murE;Dbxref=GeneID:7146214;gbkey=Gene;gene=murE;locus_tag=EC55989_0081
NC_011748.1	RefSeq	CDS	93586	95073	.	+	0	ID=cds77;Name=YP_002401221.1;Parent=gene84;Note=involved in cell wall formation%3B peptidoglycan synthesis%3B cytoplasmic enzyme%3B catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate;Dbxref=Genbank:YP_002401221.1,GeneID:7146214;gbkey=CDS;product=UDP-N-acetylmuramoylalanyl-D-glutamate--2%2C6-diaminopimelate ligase;protein_id=YP_002401221.1;transl_table=11
NC_011748.1	RefSeq	gene	95070	96428	.	+	.	ID=gene85;Name=murF;Dbxref=GeneID:7146925;gbkey=Gene;gene=murF;locus_tag=EC55989_0082
NC_011748.1	RefSeq	CDS	95070	96428	.	+	0	ID=cds78;Name=YP_002401222.1;Parent=gene85;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 88273095%2C 90248455%2C 91310568%2C 97128642%2C 11090285%2C 2668880%2C 9166795%3B Product type e : enzyme;Dbxref=Genbank:YP_002401222.1,GeneID:7146925;gbkey=CDS;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=YP_002401222.1;transl_table=11
NC_011748.1	RefSeq	gene	96422	97504	.	+	.	ID=gene86;Name=mraY;Dbxref=GeneID:7146926;gbkey=Gene;gene=mraY;locus_tag=EC55989_0083
NC_011748.1	RefSeq	CDS	96422	97504	.	+	0	ID=cds79;Name=YP_002401223.1;Parent=gene86;Note=First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan;Dbxref=Genbank:YP_002401223.1,GeneID:7146926;gbkey=CDS;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=YP_002401223.1;transl_table=11
NC_011748.1	RefSeq	gene	97507	98823	.	+	.	ID=gene87;Name=murD;Dbxref=GeneID:7146896;gbkey=Gene;gene=murD;locus_tag=EC55989_0084
NC_011748.1	RefSeq	CDS	97507	98823	.	+	0	ID=cds80;Name=YP_002401224.1;Parent=gene87;Note=UDP-N-acetylmuramoylalanine--D-glutamate ligase%3B involved in peptidoglycan biosynthesis%3B cytoplasmic%3B catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation;Dbxref=Genbank:YP_002401224.1,GeneID:7146896;gbkey=CDS;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase;protein_id=YP_002401224.1;transl_table=11
NC_011748.1	RefSeq	gene	98823	100067	.	+	.	ID=gene88;Name=ftsW;Dbxref=GeneID:7146924;gbkey=Gene;gene=ftsW;locus_tag=EC55989_0085
NC_011748.1	RefSeq	CDS	98823	100067	.	+	0	ID=cds81;Name=YP_002401225.1;Parent=gene88;Note=integral membrane protein involved in stabilizing FstZ ring during cell division;Dbxref=Genbank:YP_002401225.1,GeneID:7146924;gbkey=CDS;product=cell division protein FtsW;protein_id=YP_002401225.1;transl_table=11
NC_011748.1	RefSeq	gene	100064	101131	.	+	.	ID=gene89;Name=murG;Dbxref=GeneID:7146219;gbkey=Gene;gene=murG;locus_tag=EC55989_0086
NC_011748.1	RefSeq	CDS	100064	101131	.	+	0	ID=cds82;Name=YP_002401226.1;Parent=gene89;Note=UDP-N-acetylglucosamine--N-acetylmuramyl-%28pentapeptide%29 pyrophosphoryl-undecaprenol N-acetylglucosamine transferase%3B involved in cell wall formation%3B inner membrane-associated%3B last step of peptidoglycan synthesis;Dbxref=Genbank:YP_002401226.1,GeneID:7146219;gbkey=CDS;product=undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase;protein_id=YP_002401226.1;transl_table=11
NC_011748.1	RefSeq	gene	101185	102660	.	+	.	ID=gene90;Name=murC;Dbxref=GeneID:7146927;gbkey=Gene;gene=murC;locus_tag=EC55989_0087
NC_011748.1	RefSeq	CDS	101185	102660	.	+	0	ID=cds83;Name=YP_002401227.1;Parent=gene90;Note=Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis;Dbxref=Genbank:YP_002401227.1,GeneID:7146927;gbkey=CDS;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=YP_002401227.1;transl_table=11
NC_011748.1	RefSeq	gene	102653	103573	.	+	.	ID=gene91;Name=ddl;Dbxref=GeneID:7146923;gbkey=Gene;gene=ddl;locus_tag=EC55989_0088
NC_011748.1	RefSeq	CDS	102653	103573	.	+	0	ID=cds84;Name=YP_002401228.1;Parent=gene91;Note=D-alanine--D-alanine ligase%3B DdlA%3B DdlB%3B cytoplasmic%3B catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis%3B there are two forms of this enzyme in Escherichia coli;Dbxref=Genbank:YP_002401228.1,GeneID:7146923;gbkey=CDS;product=D-alanine--D-alanine ligase;protein_id=YP_002401228.1;transl_table=11
NC_011748.1	RefSeq	gene	103575	104405	.	+	.	ID=gene92;Name=ftsQ;Dbxref=GeneID:7145868;gbkey=Gene;gene=ftsQ;locus_tag=EC55989_0089
NC_011748.1	RefSeq	CDS	103575	104405	.	+	0	ID=cds85;Name=YP_002401229.1;Parent=gene92;Note=involved in septum formation;Dbxref=Genbank:YP_002401229.1,GeneID:7145868;gbkey=CDS;product=cell division protein FtsQ;protein_id=YP_002401229.1;transl_table=11
NC_011748.1	RefSeq	gene	104402	105664	.	+	.	ID=gene93;Name=ftsA;Dbxref=GeneID:7146218;gbkey=Gene;gene=ftsA;locus_tag=EC55989_0090
NC_011748.1	RefSeq	CDS	104402	105664	.	+	0	ID=cds86;Name=YP_002401230.1;Parent=gene93;Note=ATP-binding involved in recruitment of FtsK to Z ring%3B essential cell division protein%3B colocalizes with FtsZ through direct interaction to the septal ring structure%3B structurally similar to eukaryotic actin%3B binds directly to the cell membrane;Dbxref=Genbank:YP_002401230.1,GeneID:7146218;gbkey=CDS;product=cell division protein FtsA;protein_id=YP_002401230.1;transl_table=11
NC_011748.1	RefSeq	STS	104953	105189	.	+	.	ID=id8;Dbxref=UniSTS:10389,GeneID:7146218;gbkey=STS
NC_011748.1	RefSeq	gene	105725	106876	.	+	.	ID=gene94;Name=ftsZ;Dbxref=GeneID:7146210;gbkey=Gene;gene=ftsZ;locus_tag=EC55989_0091
NC_011748.1	RefSeq	CDS	105725	106876	.	+	0	ID=cds87;Name=YP_002401231.1;Parent=gene94;Note=GTPase%3B similar structure to tubulin%3B forms ring-shaped polymers at the site of cell division%3B other proteins such as FtsA%2C ZipA%2C and ZapA%2C interact with and regulate FtsZ function;Dbxref=Genbank:YP_002401231.1,GeneID:7146210;gbkey=CDS;product=cell division protein FtsZ;protein_id=YP_002401231.1;transl_table=11
NC_011748.1	RefSeq	gene	106977	107894	.	+	.	ID=gene95;Name=lpxC;Dbxref=GeneID:7146222;gbkey=Gene;gene=lpxC;locus_tag=EC55989_0092
NC_011748.1	RefSeq	CDS	106977	107894	.	+	0	ID=cds88;Name=YP_002401232.1;Parent=gene95;Note=zinc-dependent%3B catalyzes the deacetylation of UDP-%283-O-acyl%29-N-acetylglucosamine to UDP-3-O-%283-hydroxytetradecanoyl%29-glucosamine in the second step of lipid A biosynthesis;Dbxref=Genbank:YP_002401232.1,GeneID:7146222;gbkey=CDS;product=UDP-3-O-%5B3-hydroxymyristoyl%5D N-acetylglucosamine deacetylase;protein_id=YP_002401232.1;transl_table=11
NC_011748.1	RefSeq	gene	108125	108637	.	+	.	ID=gene96;Name=secM;Dbxref=GeneID:7146737;gbkey=Gene;gene=secM;locus_tag=EC55989_0093
NC_011748.1	RefSeq	CDS	108125	108637	.	+	0	ID=cds89;Name=YP_002401233.1;Parent=gene96;Note=secM translational pause allows for the initiation of secA translation;Dbxref=Genbank:YP_002401233.1,GeneID:7146737;gbkey=CDS;product=SecA regulator SecM;protein_id=YP_002401233.1;transl_table=11
NC_011748.1	RefSeq	gene	108699	111404	.	+	.	ID=gene97;Name=secA;Dbxref=GeneID:7147626;gbkey=Gene;gene=secA;locus_tag=EC55989_0094
NC_011748.1	RefSeq	CDS	108699	111404	.	+	0	ID=cds90;Name=YP_002401234.1;Parent=gene97;Note=functions in protein export%3B can interact with acidic membrane phospholipids and the SecYEG protein complex%3B binds to preproteins%3B binds to ATP and undergoes a conformational change to promote membrane insertion of SecA%2Fbound preprotein%3B ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane%3B additional proteins SecD%2FF%2FYajC aid SecA recycling%3B exists in an equilibrium between monomers and dimers%3B may possibly form higher order oligomers%3B proteins in this cluster correspond SecA1%3B SecA2 is not essential and seems to play a role in secretion of a subset of proteins;Dbxref=Genbank:YP_002401234.1,GeneID:7147626;gbkey=CDS;product=preprotein translocase subunit SecA;protein_id=YP_002401234.1;transl_table=11
NC_011748.1	RefSeq	gene	111464	111853	.	+	.	ID=gene98;Name=mutT;Dbxref=GeneID:7147620;gbkey=Gene;gene=mutT;locus_tag=EC55989_0095
NC_011748.1	RefSeq	CDS	111464	111853	.	+	0	ID=cds91;Name=YP_002401235.1;Parent=gene98;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 10218109%2C 89264540%2C 90136514%2C 91225007%2C 97444511%2C 1309939%2C 2841285%2C 3033442%2C 3288626%2C 7578113%2C 9063868%3B Product type e : enzyme;Dbxref=Genbank:YP_002401235.1,GeneID:7147620;gbkey=CDS;product=nucleoside triphosphate pyrophosphohydrolase;protein_id=YP_002401235.1;transl_table=11
NC_011748.1	RefSeq	gene	112160	112903	.	-	.	ID=gene99;Name=yacF;Dbxref=GeneID:7146935;gbkey=Gene;gene=yacF;locus_tag=EC55989_0096
NC_011748.1	RefSeq	CDS	112160	112903	.	-	0	ID=cds92;Name=YP_002401236.1;Parent=gene99;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002401236.1,GeneID:7146935;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401236.1;transl_table=11
NC_011748.1	RefSeq	gene	112903	113523	.	-	.	ID=gene100;Name=coaE;Dbxref=GeneID:7148011;gbkey=Gene;gene=coaE;locus_tag=EC55989_0097
NC_011748.1	RefSeq	CDS	112903	113523	.	-	0	ID=cds93;Name=YP_002401237.1;Parent=gene100;Note=catalyzes the phosphorylation of the 3%27-hydroxyl group of dephosphocoenzyme A to form coenzyme A%3B involved in coenzyme A biosynthesis;Dbxref=Genbank:YP_002401237.1,GeneID:7148011;gbkey=CDS;product=dephospho-CoA kinase;protein_id=YP_002401237.1;transl_table=11
NC_011748.1	RefSeq	gene	113748	114791	.	+	.	ID=gene101;Name=guaC;Dbxref=GeneID:7145734;gbkey=Gene;gene=guaC;locus_tag=EC55989_0098
NC_011748.1	RefSeq	CDS	113748	114791	.	+	0	ID=cds94;Name=YP_002401238.1;Parent=gene101;Note=catalyzes the NADPH-dependent deamination of GMP to inosine monophosphate;Dbxref=Genbank:YP_002401238.1,GeneID:7145734;gbkey=CDS;product=guanosine 5%27-monophosphate oxidoreductase;protein_id=YP_002401238.1;transl_table=11
NC_011748.1	RefSeq	gene	114826	116028	.	-	.	ID=gene102;Name=hofC;Dbxref=GeneID:7146380;gbkey=Gene;gene=hofC;locus_tag=EC55989_0099
NC_011748.1	RefSeq	CDS	114826	116028	.	-	0	ID=cds95;Name=YP_002401239.1;Parent=gene102;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 96099298%2C 2904262%2C 7959070%3B Product type s : structure;Dbxref=Genbank:YP_002401239.1,GeneID:7146380;gbkey=CDS;product=type IV pilin biogenesis protein;protein_id=YP_002401239.1;transl_table=11
NC_011748.1	RefSeq	gene	116018	117403	.	-	.	ID=gene103;Name=hofB;Dbxref=GeneID:7146450;gbkey=Gene;gene=hofB;locus_tag=EC55989_0100
NC_011748.1	RefSeq	CDS	116018	117403	.	-	0	ID=cds96;Name=YP_002401240.1;Parent=gene103;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 96099298%2C 7959070%3B Product type pt :  transporter;Dbxref=Genbank:YP_002401240.1,GeneID:7146450;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401240.1;transl_table=11
NC_011748.1	RefSeq	gene	117413	117853	.	-	.	ID=gene104;Name=ppdD;Dbxref=GeneID:7146449;gbkey=Gene;gene=ppdD;locus_tag=EC55989_0101
NC_011748.1	RefSeq	CDS	117413	117853	.	-	0	ID=cds97;Name=YP_002401241.1;Parent=gene104;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 20100782%2C 20271862%2C 96099298%2C 7959070%3B Product type ps :  structure;Dbxref=Genbank:YP_002401241.1,GeneID:7146449;gbkey=CDS;product=major pilin subunit;protein_id=YP_002401241.1;transl_table=11
NC_011748.1	RefSeq	gene	118056	118949	.	-	.	ID=gene105;Name=nadC;Dbxref=GeneID:7147225;gbkey=Gene;gene=nadC;locus_tag=EC55989_0102
NC_011748.1	RefSeq	CDS	118056	118949	.	-	0	ID=cds98;Name=YP_002401242.1;Parent=gene105;Note=catalyzes the formation of pyridine-2%2C3-dicarboxylate and 5-phospho-alpha-D-ribose 1-diphosphate from nictinate D-ribonucleotide;Dbxref=Genbank:YP_002401242.1,GeneID:7147225;gbkey=CDS;product=quinolinate phosphoribosyltransferase;protein_id=YP_002401242.1;transl_table=11
NC_011748.1	RefSeq	gene	119037	119588	.	+	.	ID=gene106;Name=ampD;Dbxref=GeneID:7146944;gbkey=Gene;gene=ampD;locus_tag=EC55989_0103
NC_011748.1	RefSeq	CDS	119037	119588	.	+	0	ID=cds99;Name=YP_002401243.1;Parent=gene106;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 90113890%2C 95047240%2C 2607970%2C 7959070%3B Product type e : enzyme;Dbxref=Genbank:YP_002401243.1,GeneID:7146944;gbkey=CDS;product=N-acetyl-anhydromuranmyl-L-alanine amidase;protein_id=YP_002401243.1;transl_table=11
NC_011748.1	RefSeq	gene	119585	120439	.	+	.	ID=gene107;Name=ampE;Dbxref=GeneID:7145495;gbkey=Gene;gene=ampE;locus_tag=EC55989_0104
NC_011748.1	RefSeq	CDS	119585	120439	.	+	0	ID=cds100;Name=YP_002401244.1;Parent=gene107;Note=involved in regulation of beta-lactamase%3B signaling protein;Dbxref=Genbank:YP_002401244.1,GeneID:7145495;gbkey=CDS;product=regulatory protein AmpE;protein_id=YP_002401244.1;transl_table=11
NC_011748.1	RefSeq	gene	120482	121855	.	-	.	ID=gene108;Name=aroP;Dbxref=GeneID:7145496;gbkey=Gene;gene=aroP;locus_tag=EC55989_0105
NC_011748.1	RefSeq	CDS	120482	121855	.	-	0	ID=cds101;Name=YP_002401245.1;Parent=gene108;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 1104763%2C 90174991%2C 9150230%3B Product type t : transporter;Dbxref=Genbank:YP_002401245.1,GeneID:7145496;gbkey=CDS;product=aromatic amino acid transporter;protein_id=YP_002401245.1;transl_table=11
NC_011748.1	RefSeq	gene	122396	123160	.	+	.	ID=gene109;Name=pdhR;Dbxref=GeneID:7145550;gbkey=Gene;gene=pdhR;locus_tag=EC55989_0106
NC_011748.1	RefSeq	CDS	122396	123160	.	+	0	ID=cds102;Name=YP_002401246.1;Parent=gene109;Note=activates lctPRD operon%3B autoregulates itself through repression of pdhR-aceEF-lpdA operon%3B regulates pyruvate dehydrogenase complex;Dbxref=Genbank:YP_002401246.1,GeneID:7145550;gbkey=CDS;product=transcriptional regulator PdhR;protein_id=YP_002401246.1;transl_table=11
NC_011748.1	RefSeq	gene	123001	123161	.	-	.	ID=gene110;Name=tp2;Dbxref=GeneID:7147123;gbkey=Gene;gene=tp2;locus_tag=EC55989_misc_RNA_6
NC_011748.1	RefSeq	transcript	123001	123161	.	-	.	ID=rna5;Parent=gene110;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 11553332%3B Product type n : RNA;Dbxref=GeneID:7147123;gbkey=misc_RNA;product=tp2
NC_011748.1	RefSeq	exon	123001	123161	.	-	.	ID=id9;Parent=rna5;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 11553332%3B Product type n : RNA;Dbxref=GeneID:7147123;gbkey=misc_RNA;product=tp2
NC_011748.1	RefSeq	gene	123321	125984	.	+	.	ID=gene111;Name=aceE;Dbxref=GeneID:7147829;gbkey=Gene;gene=aceE;locus_tag=EC55989_0107
NC_011748.1	RefSeq	CDS	123321	125984	.	+	0	ID=cds103;Name=YP_002401247.1;Parent=gene111;Note=E1 component%3B part of pyruvate dehydrogenase%3B forms a complex with DlaT and LpdC;Dbxref=Genbank:YP_002401247.1,GeneID:7147829;gbkey=CDS;product=pyruvate dehydrogenase subunit E1;protein_id=YP_002401247.1;transl_table=11
NC_011748.1	RefSeq	gene	125999	127891	.	+	.	ID=gene112;Name=aceF;Dbxref=GeneID:7145434;gbkey=Gene;gene=aceF;locus_tag=EC55989_0108
NC_011748.1	RefSeq	CDS	125999	127891	.	+	0	ID=cds104;Name=YP_002401248.1;Parent=gene112;Note=E2 component of pyruvate dehydrogenase multienzyme complex%3B in Escherichia coli AceF contains three N-terminal lipoyl domains;Dbxref=Genbank:YP_002401248.1,GeneID:7145434;gbkey=CDS;product=dihydrolipoamide acetyltransferase;protein_id=YP_002401248.1;transl_table=11
NC_011748.1	RefSeq	gene	128216	129640	.	+	.	ID=gene113;Name=lpd;Dbxref=GeneID:7145435;gbkey=Gene;gene=lpd;locus_tag=EC55989_0109
NC_011748.1	RefSeq	CDS	128216	129640	.	+	0	ID=cds105;Name=YP_002401249.1;Parent=gene113;Note=E3 component of pyruvate and 2-oxoglutarate dehydrogenase complex%3B catalyzes the oxidation of dihydrolipoamide to lipoamide;Dbxref=Genbank:YP_002401249.1,GeneID:7145435;gbkey=CDS;product=dihydrolipoamide dehydrogenase;protein_id=YP_002401249.1;transl_table=11
NC_011748.1	RefSeq	gene	129711	131468	.	-	.	ID=gene114;Name=yacH;Dbxref=GeneID:7146722;gbkey=Gene;gene=yacH;locus_tag=EC55989_0110
NC_011748.1	RefSeq	CDS	129711	131468	.	-	0	ID=cds106;Name=YP_002401250.1;Parent=gene114;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002401250.1,GeneID:7146722;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401250.1;transl_table=11
NC_011748.1	RefSeq	gene	131823	134420	.	+	.	ID=gene115;Name=acnB;Dbxref=GeneID:7148012;gbkey=Gene;gene=acnB;locus_tag=EC55989_0111
NC_011748.1	RefSeq	CDS	131823	134420	.	+	0	ID=cds107;Name=YP_002401251.1;Parent=gene115;Note=catalyzes the conversion of citrate to isocitrate and the conversion of 2-methylaconitate to 2-methylisocitrate;Dbxref=Genbank:YP_002401251.1,GeneID:7148012;gbkey=CDS;product=bifunctional aconitate hydratase 2%2F2-methylisocitrate dehydratase;protein_id=YP_002401251.1;transl_table=11
NC_011748.1	RefSeq	gene	134596	134958	.	+	.	ID=gene116;Name=yacL;Dbxref=GeneID:7145439;gbkey=Gene;gene=yacL;locus_tag=EC55989_0112
NC_011748.1	RefSeq	CDS	134596	134958	.	+	0	ID=cds108;Name=YP_002401252.1;Parent=gene116;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 2666401%2C 7567469;Dbxref=Genbank:YP_002401252.1,GeneID:7145439;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401252.1;transl_table=11
NC_011748.1	RefSeq	gene	134996	135790	.	-	.	ID=gene117;Name=speD;Dbxref=GeneID:7148013;gbkey=Gene;gene=speD;locus_tag=EC55989_0113
NC_011748.1	RefSeq	CDS	134996	135790	.	-	0	ID=cds109;Name=YP_002401253.1;Parent=gene117;Note=S-adenosylmethionine provides the aminopropyl moiety required for spermidine biosynthesis from putrescine;Dbxref=Genbank:YP_002401253.1,GeneID:7148013;gbkey=CDS;product=S-adenosylmethionine decarboxylase;protein_id=YP_002401253.1;transl_table=11
NC_011748.1	RefSeq	gene	135806	136672	.	-	.	ID=gene118;Name=speE;Dbxref=GeneID:7147688;gbkey=Gene;gene=speE;locus_tag=EC55989_0114
NC_011748.1	RefSeq	CDS	135806	136672	.	-	0	ID=cds110;Name=YP_002401254.1;Parent=gene118;Note=catalyzes the formation of spermidine from putrescine and S-adenosylmethioninamine;Dbxref=Genbank:YP_002401254.1,GeneID:7147688;gbkey=CDS;product=spermidine synthase;protein_id=YP_002401254.1;transl_table=11
NC_011748.1	RefSeq	gene	136778	137296	.	-	.	ID=gene119;Name=yacC;Dbxref=GeneID:7147689;gbkey=Gene;gene=yacC;locus_tag=EC55989_0115
NC_011748.1	RefSeq	CDS	136778	137296	.	-	0	ID=cds111;Name=YP_002401255.1;Parent=gene119;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 2666401;Dbxref=Genbank:YP_002401255.1,GeneID:7147689;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401255.1;transl_table=11
NC_011748.1	RefSeq	gene	137291	138841	.	+	.	ID=gene120;Name=cueO;Dbxref=GeneID:7148010;gbkey=Gene;gene=cueO;locus_tag=EC55989_0116
NC_011748.1	RefSeq	CDS	137291	138841	.	+	0	ID=cds112;Name=YP_002401256.1;Parent=gene120;Note=laccase%3B copper-stimulated phenoloxidase and ferroxidase which may be involved in copper detoxification;Dbxref=Genbank:YP_002401256.1,GeneID:7148010;gbkey=CDS;product=multicopper oxidase;protein_id=YP_002401256.1;transl_table=11
NC_011748.1	RefSeq	gene	138888	141278	.	-	.	ID=gene121;Name=gcd;Dbxref=GeneID:7145788;gbkey=Gene;gene=gcd;locus_tag=EC55989_0117
NC_011748.1	RefSeq	CDS	138888	141278	.	-	0	ID=cds113;Name=YP_002401257.1;Parent=gene121;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 10359647%2C 11604400%2C 14612441%2C 91035240%2C 93123180%2C 93286127%3B Product type e : enzyme;Dbxref=Genbank:YP_002401257.1,GeneID:7145788;gbkey=CDS;product=glucose dehydrogenase;protein_id=YP_002401257.1;transl_table=11
NC_011748.1	RefSeq	gene	141484	142020	.	+	.	ID=gene122;Name=hpt;Dbxref=GeneID:7146271;gbkey=Gene;gene=hpt;locus_tag=EC55989_0118
NC_011748.1	RefSeq	CDS	141484	142020	.	+	0	ID=cds114;Name=YP_002401258.1;Parent=gene122;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 13808016%2C 339828%2C 6787390%2C 6801015%2C 12070315%3B Product type e : enzyme;Dbxref=Genbank:YP_002401258.1,GeneID:7146271;gbkey=CDS;product=hypoxanthine phosphoribosyltransferase;protein_id=YP_002401258.1;transl_table=11
NC_011748.1	RefSeq	gene	142061	142723	.	-	.	ID=gene123;Name=can;Dbxref=GeneID:7146458;gbkey=Gene;gene=can;locus_tag=EC55989_0119
NC_011748.1	RefSeq	CDS	142061	142723	.	-	0	ID=cds115;Name=YP_002401259.1;Parent=gene123;Note=catalyzes the interconversion of bicarbonate and carbon dioxide;Dbxref=Genbank:YP_002401259.1,GeneID:7146458;gbkey=CDS;product=carbonic anhydrase;protein_id=YP_002401259.1;transl_table=11
NC_011748.1	RefSeq	gene	142832	143758	.	+	.	ID=gene124;Name=yadG;Dbxref=GeneID:7145663;gbkey=Gene;gene=yadG;locus_tag=EC55989_0120
NC_011748.1	RefSeq	CDS	142832	143758	.	+	0	ID=cds116;Name=YP_002401260.1;Parent=gene124;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002401260.1,GeneID:7145663;gbkey=CDS;product=transporter subunit: ATP-binding component of ABC superfamily;protein_id=YP_002401260.1;transl_table=11
NC_011748.1	RefSeq	gene	143755	144525	.	+	.	ID=gene125;Name=yadH;Dbxref=GeneID:7148017;gbkey=Gene;gene=yadH;locus_tag=EC55989_0122
NC_011748.1	RefSeq	CDS	143755	144525	.	+	0	ID=cds117;Name=YP_002401261.1;Parent=gene125;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 10474187%3B Product type pt :  transporter;Dbxref=Genbank:YP_002401261.1,GeneID:7148017;gbkey=CDS;product=transporter subunit: membrane component of ABC superfamily;protein_id=YP_002401261.1;transl_table=11
NC_011748.1	RefSeq	gene	144630	145070	.	+	.	ID=gene126;Name=yadI;Dbxref=GeneID:7148018;gbkey=Gene;gene=yadI;locus_tag=EC55989_0123
NC_011748.1	RefSeq	CDS	144630	145070	.	+	0	ID=cds118;Name=YP_002401262.1;Parent=gene126;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002401262.1,GeneID:7148018;gbkey=CDS;product=PTS Enzyme IIA;protein_id=YP_002401262.1;transl_table=11
NC_011748.1	RefSeq	gene	145134	146363	.	+	.	ID=gene127;Name=yadE;Dbxref=GeneID:7148019;gbkey=Gene;gene=yadE;locus_tag=EC55989_0124
NC_011748.1	RefSeq	CDS	145134	146363	.	+	0	ID=cds119;Name=YP_002401263.1;Parent=gene127;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002401263.1,GeneID:7148019;gbkey=CDS;product=polysaccharide deacetylase;protein_id=YP_002401263.1;transl_table=11
NC_011748.1	RefSeq	gene	146367	146747	.	-	.	ID=gene128;Name=panD;Dbxref=GeneID:7148016;gbkey=Gene;gene=panD;locus_tag=EC55989_0125
NC_011748.1	RefSeq	CDS	146367	146747	.	-	0	ID=cds120;Name=YP_002401264.1;Parent=gene128;Note=Converts L-aspartate to beta-alanine and provides the major route of beta-alanine production in bacteria. Beta-alanine is essential for the biosynthesis of pantothenate %28vitamin B5%29;Dbxref=Genbank:YP_002401264.1,GeneID:7148016;gbkey=CDS;product=aspartate alpha-decarboxylase;protein_id=YP_002401264.1;transl_table=11
NC_011748.1	RefSeq	gene	147021	147923	.	+	.	ID=gene129;Name=yadD;Dbxref=GeneID:7147112;gbkey=Gene;gene=yadD;locus_tag=EC55989_0126
NC_011748.1	RefSeq	CDS	147021	147923	.	+	0	ID=cds121;Name=YP_002401265.1;Parent=gene129;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 11319082%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002401265.1,GeneID:7147112;gbkey=CDS;product=transposase;protein_id=YP_002401265.1;transl_table=11
NC_011748.1	RefSeq	gene	147997	148848	.	-	.	ID=gene130;Name=panC;Dbxref=GeneID:7148015;gbkey=Gene;gene=panC;locus_tag=EC55989_0127
NC_011748.1	RefSeq	CDS	147997	148848	.	-	0	ID=cds122;Name=YP_002401266.1;Parent=gene130;Note=catalyzes the formation of %28R%29-pantothenate from pantoate and beta-alanine;Dbxref=Genbank:YP_002401266.1,GeneID:7148015;gbkey=CDS;product=pantoate--beta-alanine ligase;protein_id=YP_002401266.1;transl_table=11
NC_011748.1	RefSeq	gene	148860	149654	.	-	.	ID=gene131;Name=panB;Dbxref=GeneID:7147111;gbkey=Gene;gene=panB;locus_tag=EC55989_0128
NC_011748.1	RefSeq	CDS	148860	149654	.	-	0	ID=cds123;Name=YP_002401267.1;Parent=gene131;Note=catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5%2C10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate;Dbxref=Genbank:YP_002401267.1,GeneID:7147111;gbkey=CDS;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=YP_002401267.1;transl_table=11
NC_011748.1	RefSeq	gene	149767	151041	.	-	.	ID=gene132;Name=EC55989_0129;Dbxref=GeneID:7147110;gbkey=Gene;locus_tag=EC55989_0129
NC_011748.1	RefSeq	CDS	149767	151041	.	-	0	ID=cds124;Name=YP_002401268.1;Parent=gene132;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 8096212%3B Product type ps :  structure;Dbxref=Genbank:YP_002401268.1,GeneID:7147110;gbkey=CDS;product=fimbrial-like adhesin protein;protein_id=YP_002401268.1;transl_table=11
NC_011748.1	RefSeq	gene	151094	151690	.	-	.	ID=gene133;Name=yadK;Dbxref=GeneID:7144361;gbkey=Gene;gene=yadK;locus_tag=EC55989_0130
NC_011748.1	RefSeq	CDS	151094	151690	.	-	0	ID=cds125;Name=YP_002401269.1;Parent=gene133;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type ps :  structure;Dbxref=Genbank:YP_002401269.1,GeneID:7144361;gbkey=CDS;product=fimbrial-like adhesin protein;protein_id=YP_002401269.1;transl_table=11
NC_011748.1	RefSeq	gene	151717	152319	.	-	.	ID=gene134;Name=yadL;Dbxref=GeneID:7148020;gbkey=Gene;gene=yadL;locus_tag=EC55989_0131
NC_011748.1	RefSeq	CDS	151717	152319	.	-	0	ID=cds126;Name=YP_002401270.1;Parent=gene134;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type ps :  structure;Dbxref=Genbank:YP_002401270.1,GeneID:7148020;gbkey=CDS;product=fimbrial-like adhesin protein;protein_id=YP_002401270.1;transl_table=11
NC_011748.1	RefSeq	gene	152334	152903	.	-	.	ID=gene135;Name=yadM;Dbxref=GeneID:7148021;gbkey=Gene;gene=yadM;locus_tag=EC55989_0132
NC_011748.1	RefSeq	CDS	152334	152903	.	-	0	ID=cds127;Name=YP_002401271.1;Parent=gene135;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type ps :  structure;Dbxref=Genbank:YP_002401271.1,GeneID:7148021;gbkey=CDS;product=fimbrial-like adhesin protein;protein_id=YP_002401271.1;transl_table=11
NC_011748.1	RefSeq	gene	152920	155520	.	-	.	ID=gene136;Name=htrE;Dbxref=GeneID:7148022;gbkey=Gene;gene=htrE;locus_tag=EC55989_0133
NC_011748.1	RefSeq	CDS	152920	155520	.	-	0	ID=cds128;Name=YP_002401272.1;Parent=gene136;Note=similar to the fimbrial usher protein PapC;Dbxref=Genbank:YP_002401272.1,GeneID:7148022;gbkey=CDS;product=outer membrane usher protein;protein_id=YP_002401272.1;transl_table=11
NC_011748.1	RefSeq	gene	155555	156295	.	-	.	ID=gene137;Name=ecpD;Dbxref=GeneID:7146477;gbkey=Gene;gene=ecpD;locus_tag=EC55989_0134
NC_011748.1	RefSeq	CDS	155555	156295	.	-	0	ID=cds129;Name=YP_002401273.1;Parent=gene137;Note=Evidence 2b : Function of strongly homologous gene%3B PubMedId : 93352405%2C 8102362%2C 15561151%3B Product type f : factor;Dbxref=Genbank:YP_002401273.1,GeneID:7146477;gbkey=CDS;product=chaperone protein EcpD;protein_id=YP_002401273.1;transl_table=11
NC_011748.1	RefSeq	gene	156400	156984	.	-	.	ID=gene138;Name=yadN;Dbxref=GeneID:7145975;gbkey=Gene;gene=yadN;locus_tag=EC55989_0135
NC_011748.1	RefSeq	CDS	156400	156984	.	-	0	ID=cds130;Name=YP_002401274.1;Parent=gene138;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type ps :  structure;Dbxref=Genbank:YP_002401274.1,GeneID:7145975;gbkey=CDS;product=fimbrial-like adhesin protein;protein_id=YP_002401274.1;transl_table=11
NC_011748.1	RefSeq	gene	157354	157833	.	-	.	ID=gene139;Name=folK;Dbxref=GeneID:7148023;gbkey=Gene;gene=folK;locus_tag=EC55989_0136
NC_011748.1	RefSeq	CDS	157354	157833	.	-	0	ID=cds131;Name=YP_002401275.1;Parent=gene139;Note=catalyzes the formation of 2-amino-4-hydroxy-6-hydroxymethyl-7%2C8-dihydropteridine diphosphate from 2-amino-4-hydroxy-6-hydroxymethyl-7%2C8-dihydropteridine and ATP;Dbxref=Genbank:YP_002401275.1,GeneID:7148023;gbkey=CDS;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase;protein_id=YP_002401275.1;transl_table=11
NC_011748.1	RefSeq	gene	157830	159248	.	-	.	ID=gene140;Name=pcnB;Dbxref=GeneID:7146173;gbkey=Gene;gene=pcnB;locus_tag=EC55989_0137
NC_011748.1	RefSeq	CDS	157830	159248	.	-	0	ID=cds132;Name=YP_002401276.1;Parent=gene140;Note=Polymerase that creates the 3%27 poly%28A%29 tail found in some mRNA%27s;Dbxref=Genbank:YP_002401276.1,GeneID:7146173;gbkey=CDS;product=poly%28A%29 polymerase;protein_id=YP_002401276.1;transl_table=11
NC_011748.1	RefSeq	gene	159287	160213	.	-	.	ID=gene141;Name=yadB;Dbxref=GeneID:7147122;gbkey=Gene;gene=yadB;locus_tag=EC55989_0138
NC_011748.1	RefSeq	CDS	159287	160213	.	-	0	ID=cds133;Name=YP_002401277.1;Parent=gene141;Note=this tRNA synthetase lacks the tRNA anticodon interaction domain%3B instead this enzyme modifies tRNA%28Asp%29 with glutamate by esterifying glutamate to the 2-amino-5-%284%2C5-dihydroxy-2-cyclopenten-1-yl%29 moiety of queosine generating a modified nucleoside at the first anticodon position of tRNAAsp%3B the modified tRNA does not bind elongation factor Tu;Dbxref=Genbank:YP_002401277.1,GeneID:7147122;gbkey=CDS;product=glutamyl-Q tRNA%28Asp%29 synthetase;protein_id=YP_002401277.1;transl_table=11
NC_011748.1	RefSeq	gene	160250	160705	.	-	.	ID=gene142;Name=dksA;Dbxref=GeneID:7148014;gbkey=Gene;gene=dksA;locus_tag=EC55989_0139
NC_011748.1	RefSeq	CDS	160250	160705	.	-	0	ID=cds134;Name=YP_002401278.1;Parent=gene142;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 15294157%2C 90202727%2C 2013578%2C 9298646%2C 9600841%3B Product type r : regulator;Dbxref=Genbank:YP_002401278.1,GeneID:7148014;gbkey=CDS;product=RNA polymerase-binding transcription factor;protein_id=YP_002401278.1;transl_table=11
NC_011748.1	RefSeq	gene	160883	161587	.	-	.	ID=gene143;Name=sfsA;Dbxref=GeneID:7145926;gbkey=Gene;gene=sfsA;locus_tag=EC55989_0140
NC_011748.1	RefSeq	CDS	160883	161587	.	-	0	ID=cds135;Name=YP_002401279.1;Parent=gene143;Note=Regulatory factor involved in maltose metabolism;Dbxref=Genbank:YP_002401279.1,GeneID:7145926;gbkey=CDS;product=sugar fermentation stimulation protein A;protein_id=YP_002401279.1;transl_table=11
NC_011748.1	RefSeq	gene	161602	162132	.	-	.	ID=gene144;Name=ligT;Dbxref=GeneID:7147645;gbkey=Gene;gene=ligT;locus_tag=EC55989_0141
NC_011748.1	RefSeq	CDS	161602	162132	.	-	0	ID=cds136;Name=YP_002401280.1;Parent=gene144;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 97094878%3B Product type e : enzyme;Dbxref=Genbank:YP_002401280.1,GeneID:7147645;gbkey=CDS;product=2%27-5%27 RNA ligase;protein_id=YP_002401280.1;transl_table=11
NC_011748.1	RefSeq	gene	162206	164635	.	+	.	ID=gene145;Name=hrpB;Dbxref=GeneID:7146702;gbkey=Gene;gene=hrpB;locus_tag=EC55989_0142
NC_011748.1	RefSeq	CDS	162206	164635	.	+	0	ID=cds137;Name=YP_002401281.1;Parent=gene145;Note=similar in sequence to the ATP-dependent RNA helicase HrpA;Dbxref=Genbank:YP_002401281.1,GeneID:7146702;gbkey=CDS;product=ATP-dependent RNA helicase HrpB;protein_id=YP_002401281.1;transl_table=11
NC_011748.1	RefSeq	gene	164831	167365	.	+	.	ID=gene146;Name=mrcB;Dbxref=GeneID:7146460;gbkey=Gene;gene=mrcB;locus_tag=EC55989_0143
NC_011748.1	RefSeq	CDS	164831	167365	.	+	0	ID=cds138;Name=YP_002401282.1;Parent=gene146;Note=bifunctional periplasmic enzyme%3B contains transglycosylase and transpeptidase activity%3B major enzyme for peptidoglycan biosynthesis in Escherichia coli%3B transmembrane protein%3B forms dimers%3B three variants%2C one of which may be a degradation product%2C while the other appears to result from an alternative initiation site%2C are found within the cell;Dbxref=Genbank:YP_002401282.1,GeneID:7146460;gbkey=CDS;product=penicillin-binding protein 1b;protein_id=YP_002401282.1;transl_table=11
NC_011748.1	RefSeq	gene	167585	169828	.	+	.	ID=gene147;Name=fhuA;Dbxref=GeneID:7146899;gbkey=Gene;gene=fhuA;locus_tag=EC55989_0144
NC_011748.1	RefSeq	CDS	167585	169828	.	+	0	ID=cds139;Name=YP_002401283.1;Parent=gene147;Note=involved with the transport of ferrichrome across the outer membrane%3B binds the ferrichrome-iron ligand and interacts with the TonB protein;Dbxref=Genbank:YP_002401283.1,GeneID:7146899;gbkey=CDS;product=ferrichrome outer membrane transporter;protein_id=YP_002401283.1;transl_table=11
NC_011748.1	RefSeq	gene	169879	170676	.	+	.	ID=gene148;Name=fhuC;Dbxref=GeneID:7146099;gbkey=Gene;gene=fhuC;locus_tag=EC55989_0145
NC_011748.1	RefSeq	CDS	169879	170676	.	+	0	ID=cds140;Name=YP_002401284.1;Parent=gene148;Note=part of the FhuBCD ATP-dependent iron %28III%29 hydroxamate transporter;Dbxref=Genbank:YP_002401284.1,GeneID:7146099;gbkey=CDS;product=iron-hydroxamate transporter ATP-binding subunit;protein_id=YP_002401284.1;transl_table=11
NC_011748.1	RefSeq	gene	170676	171566	.	+	.	ID=gene149;Name=fhuD;Dbxref=GeneID:7146101;gbkey=Gene;gene=fhuD;locus_tag=EC55989_0146
NC_011748.1	RefSeq	CDS	170676	171566	.	+	0	ID=cds141;Name=YP_002401285.1;Parent=gene149;Note=Part of the FhuBCD ATP-dependent iron %28III%29 hydroxamate transporter%3B binds to all hydroxamate siderophores;Dbxref=Genbank:YP_002401285.1,GeneID:7146101;gbkey=CDS;product=iron-hydroxamate transporter substrate-binding subunit;protein_id=YP_002401285.1;transl_table=11
NC_011748.1	RefSeq	gene	171563	173545	.	+	.	ID=gene150;Name=fhuB;Dbxref=GeneID:7146102;gbkey=Gene;gene=fhuB;locus_tag=EC55989_0147
NC_011748.1	RefSeq	CDS	171563	173545	.	+	0	ID=cds142;Name=YP_002401286.1;Parent=gene150;Note=part of the FhuBCD ATP-dependent iron %28III%29 hydroxamate transporter involved in the high-affinity transport of Fe%283%2B%29-ferrichrome;Dbxref=Genbank:YP_002401286.1,GeneID:7146102;gbkey=CDS;product=iron-hydroxamate transporter permease subunit;protein_id=YP_002401286.1;transl_table=11
NC_011748.1	RefSeq	gene	173580	174860	.	-	.	ID=gene151;Name=hemL;Dbxref=GeneID:7146100;gbkey=Gene;gene=hemL;locus_tag=EC55989_0148
NC_011748.1	RefSeq	CDS	173580	174860	.	-	0	ID=cds143;Name=YP_002401287.1;Parent=gene151;Note=Converts %28S%29-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway;Dbxref=Genbank:YP_002401287.1,GeneID:7146100;gbkey=CDS;product=glutamate-1-semialdehyde aminotransferase;protein_id=YP_002401287.1;transl_table=11
NC_011748.1	RefSeq	gene	175085	176506	.	+	.	ID=gene152;Name=clcA;Dbxref=GeneID:7146415;gbkey=Gene;gene=clcA;locus_tag=EC55989_0149
NC_011748.1	RefSeq	CDS	175085	176506	.	+	0	ID=cds144;Name=YP_002401288.1;Parent=gene152;Note=Acts as an electrical shunt for an outwardly-directed proton pump that is linked to amino acid decarboxylation;Dbxref=Genbank:YP_002401288.1,GeneID:7146415;gbkey=CDS;product=chloride channel protein;protein_id=YP_002401288.1;transl_table=11
NC_011748.1	RefSeq	gene	176588	176932	.	+	.	ID=gene153;Name=yadR;Dbxref=GeneID:7145718;gbkey=Gene;gene=yadR;locus_tag=EC55989_0151
NC_011748.1	RefSeq	CDS	176588	176932	.	+	0	ID=cds145;Name=YP_002401289.1;Parent=gene153;Note=essential respiratory protein A%3B may be involved in the transfer of iron-sulfur clusters%3B essential for growth using oxygen or alternate electron acceptors;Dbxref=Genbank:YP_002401289.1,GeneID:7145718;gbkey=CDS;product=iron-sulfur cluster insertion protein ErpA;protein_id=YP_002401289.1;transl_table=11
NC_011748.1	RefSeq	gene	176979	177602	.	-	.	ID=gene154;Name=yadS;Dbxref=GeneID:7148024;gbkey=Gene;gene=yadS;locus_tag=EC55989_0152
NC_011748.1	RefSeq	CDS	176979	177602	.	-	0	ID=cds146;Name=YP_002401290.1;Parent=gene154;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002401290.1,GeneID:7148024;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401290.1;transl_table=11
NC_011748.1	RefSeq	gene	177640	178440	.	-	.	ID=gene155;Name=btuF;Dbxref=GeneID:7148025;gbkey=Gene;gene=btuF;locus_tag=EC55989_0153
NC_011748.1	RefSeq	CDS	177640	178440	.	-	0	ID=cds147;Name=YP_002401291.1;Parent=gene155;Note=solute binding component of the vitamin B12 transport system BtuCDF;Dbxref=Genbank:YP_002401291.1,GeneID:7148025;gbkey=CDS;product=vitamin B12-transporter protein BtuF;protein_id=YP_002401291.1;transl_table=11
NC_011748.1	RefSeq	gene	178433	179131	.	-	.	ID=gene156;Name=pfs;Dbxref=GeneID:7145643;gbkey=Gene;gene=pfs;locus_tag=EC55989_0154
NC_011748.1	RefSeq	CDS	178433	179131	.	-	0	ID=cds148;Name=YP_002401292.1;Parent=gene156;Note=enables the cleavage of the glycosidic bond in both 5%27-methylthioadenosine and S-adenosylhomocysteine;Dbxref=Genbank:YP_002401292.1,GeneID:7145643;gbkey=CDS;product=5%27-methylthioadenosine%2FS-adenosylhomocysteine nucleosidase;protein_id=YP_002401292.1;transl_table=11
NC_011748.1	RefSeq	gene	179215	180732	.	+	.	ID=gene157;Name=dgt;Dbxref=GeneID:7147145;gbkey=Gene;gene=dgt;locus_tag=EC55989_0155
NC_011748.1	RefSeq	CDS	179215	180732	.	+	0	ID=cds149;Name=YP_002401293.1;Parent=gene157;Note=forms a homotetramer%3B requires magnesium for activity%3B catalyzes the hydrolysis of dGTP to form deoxyguanosine and triphosphate;Dbxref=Genbank:YP_002401293.1,GeneID:7147145;gbkey=CDS;product=deoxyguanosinetriphosphate triphosphohydrolase;protein_id=YP_002401293.1;transl_table=11
NC_011748.1	RefSeq	gene	180862	182286	.	+	.	ID=gene158;Name=degP;Dbxref=GeneID:7145901;gbkey=Gene;gene=degP;locus_tag=EC55989_0156
NC_011748.1	RefSeq	CDS	180862	182286	.	+	0	ID=cds150;Name=YP_002401294.1;Parent=gene158;Note=protease Do%3B required at high temperature%3B degrades damaged proteins;Dbxref=Genbank:YP_002401294.1,GeneID:7145901;gbkey=CDS;product=serine endoprotease;protein_id=YP_002401294.1;transl_table=11
NC_011748.1	RefSeq	gene	182441	183598	.	+	.	ID=gene159;Name=cdaR;Dbxref=GeneID:7145879;gbkey=Gene;gene=cdaR;locus_tag=EC55989_0157
NC_011748.1	RefSeq	CDS	182441	183598	.	+	0	ID=cds151;Name=YP_002401295.1;Parent=gene159;Note=regulates the expression of the operons for the enzymes involved in galactarate%2C glucarate and glycerate utilization;Dbxref=Genbank:YP_002401295.1,GeneID:7145879;gbkey=CDS;product=carbohydrate diacid transcriptional activator CdaR;protein_id=YP_002401295.1;transl_table=11
NC_011748.1	RefSeq	gene	183687	184073	.	-	.	ID=gene160;Name=yaeH;Dbxref=GeneID:7145682;gbkey=Gene;gene=yaeH;locus_tag=EC55989_0158
NC_011748.1	RefSeq	CDS	183687	184073	.	-	0	ID=cds152;Name=YP_002401296.1;Parent=gene160;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002401296.1,GeneID:7145682;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401296.1;transl_table=11
NC_011748.1	RefSeq	gene	184388	185212	.	-	.	ID=gene161;Name=dapD;Dbxref=GeneID:7148029;gbkey=Gene;gene=dapD;locus_tag=EC55989_0159
NC_011748.1	RefSeq	CDS	184388	185212	.	-	0	ID=cds153;Name=YP_002401297.1;Parent=gene161;Note=catalyzes the formation of N-succinyl-2-amino-6-ketopimelate from succinyl-CoA and tetrahydrodipicolinate in the lysine biosynthetic pathway;Dbxref=Genbank:YP_002401297.1,GeneID:7148029;gbkey=CDS;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-carboxylate N-succinyltransferase;protein_id=YP_002401297.1;transl_table=11
NC_011748.1	RefSeq	gene	185243	187915	.	-	.	ID=gene162;Name=glnD;Dbxref=GeneID:7145851;gbkey=Gene;gene=glnD;locus_tag=EC55989_0160
NC_011748.1	RefSeq	CDS	185243	187915	.	-	0	ID=cds154;Name=YP_002401298.1;Parent=gene162;Note=catalyzes the uridylylation or deuridylylation of the PII nitrogen regulatory protein;Dbxref=Genbank:YP_002401298.1,GeneID:7145851;gbkey=CDS;product=PII uridylyl-transferase;protein_id=YP_002401298.1;transl_table=11
NC_011748.1	RefSeq	gene	187977	188771	.	-	.	ID=gene163;Name=map;Dbxref=GeneID:7146304;gbkey=Gene;gene=map;locus_tag=EC55989_0161
NC_011748.1	RefSeq	CDS	187977	188771	.	-	0	ID=cds155;Name=YP_002401299.1;Parent=gene163;Note=catalyzes the removal of N-terminal amino acids from peptides and arylamides%3B generally Co%28II%29 however activity has been shown for some methionine aminopeptidases with Zn%2C Fe%2C or Mn;Dbxref=Genbank:YP_002401299.1,GeneID:7146304;gbkey=CDS;product=methionine aminopeptidase;protein_id=YP_002401299.1;transl_table=11
NC_011748.1	RefSeq	gene	188771	188992	.	-	.	ID=gene164;Name=EC55989_0162;Dbxref=GeneID:7146786;gbkey=Gene;locus_tag=EC55989_0162
NC_011748.1	RefSeq	CDS	188771	188992	.	-	0	ID=cds156;Name=YP_002401300.1;Parent=gene164;Note=Evidence 6 : Doubtful CDS;Dbxref=Genbank:YP_002401300.1,GeneID:7146786;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401300.1;transl_table=11
NC_011748.1	RefSeq	gene	188977	189112	.	+	.	ID=gene165;Name=t44;Dbxref=GeneID:7144362;gbkey=Gene;gene=t44;locus_tag=EC55989_misc_RNA_7
NC_011748.1	RefSeq	transcript	188977	189112	.	+	.	ID=rna6;Parent=gene165;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type n : RNA;Dbxref=GeneID:7144362;gbkey=misc_RNA;product=t44
NC_011748.1	RefSeq	exon	188977	189112	.	+	.	ID=id10;Parent=rna6;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type n : RNA;Dbxref=GeneID:7144362;gbkey=misc_RNA;product=t44
NC_011748.1	RefSeq	gene	189139	189864	.	+	.	ID=gene166;Name=rpsB;Dbxref=GeneID:7147744;gbkey=Gene;gene=rpsB;locus_tag=EC55989_0163
NC_011748.1	RefSeq	CDS	189139	189864	.	+	0	ID=cds157;Name=YP_002401301.1;Parent=gene166;Note=one of the last subunits in the assembly of the 30S subunit%3B absence of S2 does not inhibit assembly but results in an inactive subunit;Dbxref=Genbank:YP_002401301.1,GeneID:7147744;gbkey=CDS;product=30S ribosomal protein S2;protein_id=YP_002401301.1;transl_table=11
NC_011748.1	RefSeq	gene	190122	190973	.	+	.	ID=gene167;Name=tsf;Dbxref=GeneID:7147506;gbkey=Gene;gene=tsf;locus_tag=EC55989_0164
NC_011748.1	RefSeq	CDS	190122	190973	.	+	0	ID=cds158;Name=YP_002401302.1;Parent=gene167;Note=EF-Ts%3B functions during elongation stage of protein translation%3B forms a dimer%3B associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu;Dbxref=Genbank:YP_002401302.1,GeneID:7147506;gbkey=CDS;product=elongation factor Ts;protein_id=YP_002401302.1;transl_table=11
NC_011748.1	RefSeq	gene	191120	191845	.	+	.	ID=gene168;Name=pyrH;Dbxref=GeneID:7147865;gbkey=Gene;gene=pyrH;locus_tag=EC55989_0165
NC_011748.1	RefSeq	CDS	191120	191845	.	+	0	ID=cds159;Name=YP_002401303.1;Parent=gene168;Note=Catalyzes the phosphorylation of UMP to UDP;Dbxref=Genbank:YP_002401303.1,GeneID:7147865;gbkey=CDS;product=uridylate kinase;protein_id=YP_002401303.1;transl_table=11
NC_011748.1	RefSeq	gene	192137	192694	.	+	.	ID=gene169;Name=frr;Dbxref=GeneID:7147323;gbkey=Gene;gene=frr;locus_tag=EC55989_0166
NC_011748.1	RefSeq	CDS	192137	192694	.	+	0	ID=cds160;Name=YP_002401304.1;Parent=gene169;Note=Rrf%3B Frr%3B ribosome-recycling factor%3B release factor 4%3B RF4%3B recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G%3B A GTPase-dependent process results in release of 50S from 70S%3B inhibited by release factor RF-1%3B essential for viability%3B structurally similar to tRNAs;Dbxref=Genbank:YP_002401304.1,GeneID:7147323;gbkey=CDS;product=ribosome recycling factor;protein_id=YP_002401304.1;transl_table=11
NC_011748.1	RefSeq	gene	192786	193982	.	+	.	ID=gene170;Name=dxr;Dbxref=GeneID:7146193;gbkey=Gene;gene=dxr;locus_tag=EC55989_0167
NC_011748.1	RefSeq	CDS	192786	193982	.	+	0	ID=cds161;Name=YP_002401305.1;Parent=gene170;Note=catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate %28DXP%29 to 2-C-methyl-D-erythritol 4-phosphate;Dbxref=Genbank:YP_002401305.1,GeneID:7146193;gbkey=CDS;product=1-deoxy-D-xylulose 5-phosphate reductoisomerase;protein_id=YP_002401305.1;transl_table=11
NC_011748.1	RefSeq	gene	194168	194929	.	+	.	ID=gene171;Name=ispU;Dbxref=GeneID:7145963;gbkey=Gene;gene=ispU;locus_tag=EC55989_0168
NC_011748.1	RefSeq	CDS	194168	194929	.	+	0	ID=cds162;Name=YP_002401306.1;Parent=gene171;Note=catalyzes the formation of undecaprenyl pyrophosphate from isopentenyl pyrophosphate;Dbxref=Genbank:YP_002401306.1,GeneID:7145963;gbkey=CDS;product=undecaprenyl pyrophosphate synthase;protein_id=YP_002401306.1;transl_table=11
NC_011748.1	RefSeq	gene	194942	195799	.	+	.	ID=gene172;Name=cdsA;Dbxref=GeneID:7146632;gbkey=Gene;gene=cdsA;locus_tag=EC55989_0169
NC_011748.1	RefSeq	CDS	194942	195799	.	+	0	ID=cds163;Name=YP_002401307.1;Parent=gene172;Note=catalyzes the synthesis of CDP-diglyceride from CTP and phosphatidate;Dbxref=Genbank:YP_002401307.1,GeneID:7146632;gbkey=CDS;product=CDP-diglyceride synthase;protein_id=YP_002401307.1;transl_table=11
NC_011748.1	RefSeq	gene	195811	197163	.	+	.	ID=gene173;Name=yaeL;Dbxref=GeneID:7145685;gbkey=Gene;gene=yaeL;locus_tag=EC55989_0170
NC_011748.1	RefSeq	CDS	195811	197163	.	+	0	ID=cds164;Name=YP_002401308.1;Parent=gene173;Note=catalyzes the cleavage of RseA which activates the sigmaE-mediated stress response;Dbxref=Genbank:YP_002401308.1,GeneID:7145685;gbkey=CDS;product=zinc metallopeptidase RseP;protein_id=YP_002401308.1;transl_table=11
NC_011748.1	RefSeq	gene	197193	199625	.	+	.	ID=gene174;Name=yaeT;Dbxref=GeneID:7148031;gbkey=Gene;gene=yaeT;locus_tag=EC55989_0171
NC_011748.1	RefSeq	CDS	197193	199625	.	+	0	ID=cds165;Name=YP_002401309.1;Parent=gene174;Note=part of a complex with YfgL%2C YfiO%2C and NlpB involved in outer membrane protein biosynthesis%3B involved in the assembly of outer membrane proteins;Dbxref=Genbank:YP_002401309.1,GeneID:7148031;gbkey=CDS;product=outer membrane protein assembly factor YaeT;protein_id=YP_002401309.1;transl_table=11
NC_011748.1	RefSeq	gene	199747	200232	.	+	.	ID=gene175;Name=hlpA;Dbxref=GeneID:7148035;gbkey=Gene;gene=hlpA;locus_tag=EC55989_0172
NC_011748.1	RefSeq	CDS	199747	200232	.	+	0	ID=cds166;Name=YP_002401310.1;Parent=gene175;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 15101556%2C 90201355%2C 97032152%2C 99386928%2C 1987124%2C 2843433%2C 9298646%2C 2167239%3B Product type f : factor;Dbxref=Genbank:YP_002401310.1,GeneID:7148035;gbkey=CDS;product=periplasmic chaperone;protein_id=YP_002401310.1;transl_table=11
NC_011748.1	RefSeq	gene	200236	201261	.	+	.	ID=gene176;Name=lpxD;Dbxref=GeneID:7146444;gbkey=Gene;gene=lpxD;locus_tag=EC55989_0173
NC_011748.1	RefSeq	CDS	200236	201261	.	+	0	ID=cds167;Name=YP_002401311.1;Parent=gene176;Note=adds the O-linked and N-linked 3%28R%29-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis;Dbxref=Genbank:YP_002401311.1,GeneID:7146444;gbkey=CDS;product=UDP-3-O-%5B3-hydroxymyristoyl%5D glucosamine N-acyltransferase;protein_id=YP_002401311.1;transl_table=11
NC_011748.1	RefSeq	gene	201366	201821	.	+	.	ID=gene177;Name=fabZ;Dbxref=GeneID:7146738;gbkey=Gene;gene=fabZ;locus_tag=EC55989_0174
NC_011748.1	RefSeq	CDS	201366	201821	.	+	0	ID=cds168;Name=YP_002401312.1;Parent=gene177;Note=in Pseudomonas aeruginosa this enzyme is a trimer of dimers%3B essential for membrane formation%3B performs third step of type II fatty acid biosynthesis%3B catalyzes dehydration of %283R%29-hydroxyacyl-ACP to trans-2-acyl-ACP;Dbxref=Genbank:YP_002401312.1,GeneID:7146738;gbkey=CDS;product=%283R%29-hydroxymyristoyl-ACP dehydratase;protein_id=YP_002401312.1;transl_table=11
NC_011748.1	RefSeq	gene	201825	202613	.	+	.	ID=gene178;Name=lpxA;Dbxref=GeneID:7146054;gbkey=Gene;gene=lpxA;locus_tag=EC55989_0175
NC_011748.1	RefSeq	CDS	201825	202613	.	+	0	ID=cds169;Name=YP_002401313.1;Parent=gene178;Note=catalyzes the addition of %28R%29-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis;Dbxref=Genbank:YP_002401313.1,GeneID:7146054;gbkey=CDS;product=UDP-N-acetylglucosamine acyltransferase;protein_id=YP_002401313.1;transl_table=11
NC_011748.1	RefSeq	gene	202613	203761	.	+	.	ID=gene179;Name=lpxB;Dbxref=GeneID:7146735;gbkey=Gene;gene=lpxB;locus_tag=EC55989_0176
NC_011748.1	RefSeq	CDS	202613	203761	.	+	0	ID=cds170;Name=YP_002401314.1;Parent=gene179;Note=catalyzes the formation of lipid A disaccharide from UDP-2%2C3-diacylglucosamine and 2%2C3-diacylglucosamine-1-phosphate%2C lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM;Dbxref=Genbank:YP_002401314.1,GeneID:7146735;gbkey=CDS;product=lipid-A-disaccharide synthase;protein_id=YP_002401314.1;transl_table=11
NC_011748.1	RefSeq	gene	203758	204354	.	+	.	ID=gene180;Name=rnhB;Dbxref=GeneID:7146736;gbkey=Gene;gene=rnhB;locus_tag=EC55989_0177
NC_011748.1	RefSeq	CDS	203758	204354	.	+	0	ID=cds171;Name=YP_002401315.1;Parent=gene180;Note=RNH2%3B RNase HII%3B binds manganese%3B endonuclease which specifically degrades the RNA of RNA-DNA hybrids;Dbxref=Genbank:YP_002401315.1,GeneID:7146736;gbkey=CDS;product=ribonuclease HII;protein_id=YP_002401315.1;transl_table=11
NC_011748.1	RefSeq	gene	204391	207873	.	+	.	ID=gene181;Name=dnaE;Dbxref=GeneID:7147451;gbkey=Gene;gene=dnaE;locus_tag=EC55989_0178
NC_011748.1	RefSeq	CDS	204391	207873	.	+	0	ID=cds172;Name=YP_002401316.1;Parent=gene181;Note=catalyzes DNA-template-directed extension of the 3%27- end of a DNA strand by one nucleotide at a time%3B main replicative polymerase;Dbxref=Genbank:YP_002401316.1,GeneID:7147451;gbkey=CDS;product=DNA polymerase III subunit alpha;protein_id=YP_002401316.1;transl_table=11
NC_011748.1	RefSeq	gene	207886	208845	.	+	.	ID=gene182;Name=accA;Dbxref=GeneID:7145935;gbkey=Gene;gene=accA;locus_tag=EC55989_0179
NC_011748.1	RefSeq	CDS	207886	208845	.	+	0	ID=cds173;Name=YP_002401317.1;Parent=gene182;Note=catalyzes the carboxylation of acetyl-CoA to malonyl-CoA%3B forms a tetramer composed of two alpha %28AccA%29 and two beta %28AccD%29 subunits%3B one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein;Dbxref=Genbank:YP_002401317.1,GeneID:7145935;gbkey=CDS;product=acetyl-CoA carboxylase carboxyltransferase subunit alpha;protein_id=YP_002401317.1;transl_table=11
NC_011748.1	RefSeq	gene	208944	211085	.	+	.	ID=gene183;Name=ldcC;Dbxref=GeneID:7145428;gbkey=Gene;gene=ldcC;locus_tag=EC55989_0180
NC_011748.1	RefSeq	CDS	208944	211085	.	+	0	ID=cds174;Name=YP_002401318.1;Parent=gene183;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 97480927%2C 98195734%2C 98357244%2C 9226257%2C 9723924%3B Product type e : enzyme;Dbxref=Genbank:YP_002401318.1,GeneID:7145428;gbkey=CDS;product=lysine decarboxylase 2%2C constitutive;protein_id=YP_002401318.1;transl_table=11
NC_011748.1	RefSeq	gene	211142	211531	.	+	.	ID=gene184;Name=yaeR;Dbxref=GeneID:7146681;gbkey=Gene;gene=yaeR;locus_tag=EC55989_0181
NC_011748.1	RefSeq	CDS	211142	211531	.	+	0	ID=cds175;Name=YP_002401319.1;Parent=gene184;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002401319.1,GeneID:7146681;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401319.1;transl_table=11
NC_011748.1	RefSeq	gene	211596	212894	.	+	.	ID=gene185;Name=tilS;Dbxref=GeneID:7148034;gbkey=Gene;gene=tilS;locus_tag=EC55989_0182
NC_011748.1	RefSeq	CDS	211596	212894	.	+	0	ID=cds176;Name=YP_002401320.1;Parent=gene185;Note=Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA%28Ile%29 that contains the anticodon CAU%3B ATP-dependent%3B responsible for modifying the wobble-base of the CAU anticodon of tRNAIle such that it exhibits proper recognition of the AUA codon rather than the AUG codon and is in turn properly recognized by isoleucyl-tRNA synthetase;Dbxref=Genbank:YP_002401320.1,GeneID:7148034;gbkey=CDS;product=tRNA%28Ile%29-lysidine synthetase;protein_id=YP_002401320.1;transl_table=11
NC_011748.1	RefSeq	gene	212943	213197	.	-	.	ID=gene186;Name=rof;Dbxref=GeneID:7147802;gbkey=Gene;gene=rof;locus_tag=EC55989_0183
NC_011748.1	RefSeq	CDS	212943	213197	.	-	0	ID=cds177;Name=YP_002401321.1;Parent=gene186;Note=Suppresses temperature-sensitive mutations in essential genes by modulating rho-dependent transcription termination;Dbxref=Genbank:YP_002401321.1,GeneID:7147802;gbkey=CDS;product=Rho-binding antiterminator;protein_id=YP_002401321.1;transl_table=11
NC_011748.1	RefSeq	gene	213190	213390	.	-	.	ID=gene187;Name=yaeP;Dbxref=GeneID:7147458;gbkey=Gene;gene=yaeP;locus_tag=EC55989_0184
NC_011748.1	RefSeq	CDS	213190	213390	.	-	0	ID=cds178;Name=YP_002401322.1;Parent=gene187;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002401322.1,GeneID:7147458;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401322.1;transl_table=11
NC_011748.1	RefSeq	gene	213556	214101	.	+	.	ID=gene188;Name=yaeQ;Dbxref=GeneID:7148032;gbkey=Gene;gene=yaeQ;locus_tag=EC55989_0185
NC_011748.1	RefSeq	CDS	213556	214101	.	+	0	ID=cds179;Name=YP_002401323.1;Parent=gene188;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002401323.1,GeneID:7148032;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401323.1;transl_table=11
NC_011748.1	RefSeq	gene	214098	214520	.	+	.	ID=gene189;Name=yaeJ;Dbxref=GeneID:7148033;gbkey=Gene;gene=yaeJ;locus_tag=EC55989_0186
NC_011748.1	RefSeq	CDS	214098	214520	.	+	0	ID=cds180;Name=YP_002401324.1;Parent=gene189;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002401324.1,GeneID:7148033;gbkey=CDS;product=peptidyl-tRNA hydrolase domain-containing protein;protein_id=YP_002401324.1;transl_table=11
NC_011748.1	RefSeq	gene	214534	215244	.	+	.	ID=gene190;Name=nlpE;Dbxref=GeneID:7148030;gbkey=Gene;gene=nlpE;locus_tag=EC55989_0187
NC_011748.1	RefSeq	CDS	214534	215244	.	+	0	ID=cds181;Name=YP_002401325.1;Parent=gene190;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 11830644%2C 95362641%2C 95362642%3B Product type lp : lipoprotein;Dbxref=Genbank:YP_002401325.1,GeneID:7148030;gbkey=CDS;product=lipoprotein involved with copper homeostasis and adhesion;protein_id=YP_002401325.1;transl_table=11
NC_011748.1	RefSeq	gene	215494	216474	.	+	.	ID=gene191;Name=EC55989_0189;Dbxref=GeneID:7147010;gbkey=Gene;locus_tag=EC55989_0189
NC_011748.1	RefSeq	CDS	215494	216474	.	+	0	ID=cds182;Name=YP_002401326.1;Parent=gene191;Note=Evidence 2b : Function of strongly homologous gene%3B Product type e : enzyme;Dbxref=Genbank:YP_002401326.1,GeneID:7147010;gbkey=CDS;product=transposase%2C IS110 family;protein_id=YP_002401326.1;transl_table=11
NC_011748.1	RefSeq	gene	216678	216989	.	-	.	ID=gene192;Name=yaeF;Dbxref=GeneID:7144363;gbkey=Gene;gene=yaeF;locus_tag=EC55989_0190;pseudo=true
NC_011748.1	RefSeq	region	216678	216989	.	-	.	ID=id11;Note=fragment of  lipoprotein %28part 2%29%3BEvidence 7 : Gene remnant%3B Product type lp : lipoprotein;Dbxref=GeneID:7144363;gbkey=misc_feature
NC_011748.1	RefSeq	gene	216920	217510	.	-	.	ID=gene193;Name=yaeF;Dbxref=GeneID:7148027;gbkey=Gene;gene=yaeF;locus_tag=EC55989_0191;pseudo=true
NC_011748.1	RefSeq	region	216920	217510	.	-	.	ID=id12;Note=fragment of  lipoprotein %28part 1%29%3BEvidence 7 : Gene remnant%3B Product type lp : lipoprotein;Dbxref=GeneID:7148027;gbkey=misc_feature
NC_011748.1	RefSeq	gene	217554	219272	.	-	.	ID=gene194;Name=proS;Dbxref=GeneID:7148028;gbkey=Gene;gene=proS;locus_tag=EC55989_0192
NC_011748.1	RefSeq	CDS	217554	219272	.	-	0	ID=cds183;Name=YP_002401327.1;Parent=gene194;Note=catalyzes the formation of prolyl-tRNA%28Pro%29 from proline and tRNA%28Pro%29;Dbxref=Genbank:YP_002401327.1,GeneID:7148028;gbkey=CDS;product=prolyl-tRNA synthetase;protein_id=YP_002401327.1;transl_table=11
NC_011748.1	RefSeq	gene	219384	220091	.	-	.	ID=gene195;Name=yaeB;Dbxref=GeneID:7147257;gbkey=Gene;gene=yaeB;locus_tag=EC55989_0193
NC_011748.1	RefSeq	CDS	219384	220091	.	-	0	ID=cds184;Name=YP_002401328.1;Parent=gene195;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002401328.1,GeneID:7147257;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401328.1;transl_table=11
NC_011748.1	RefSeq	gene	220088	220492	.	-	.	ID=gene196;Name=rcsF;Dbxref=GeneID:7148026;gbkey=Gene;gene=rcsF;locus_tag=EC55989_0194
NC_011748.1	RefSeq	CDS	220088	220492	.	-	0	ID=cds185;Name=YP_002401329.1;Parent=gene196;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 93094132%3B Product type pr :  regulator;Dbxref=Genbank:YP_002401329.1,GeneID:7148026;gbkey=CDS;product=outer membrane lipoprotein;protein_id=YP_002401329.1;transl_table=11
NC_011748.1	RefSeq	gene	220610	221425	.	-	.	ID=gene197;Name=metQ;Dbxref=GeneID:7147351;gbkey=Gene;gene=metQ;locus_tag=EC55989_0195
NC_011748.1	RefSeq	CDS	220610	221425	.	-	0	ID=cds186;Name=YP_002401330.1;Parent=gene197;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 12169620%2C 12218041%2C 12819857%2C 1459951%3B Product type t : transporter;Dbxref=Genbank:YP_002401330.1,GeneID:7147351;gbkey=CDS;product=DL-methionine transporter substrate-binding subunit;protein_id=YP_002401330.1;transl_table=11
NC_011748.1	RefSeq	gene	221465	222118	.	-	.	ID=gene198;Name=metI;Dbxref=GeneID:7146836;gbkey=Gene;gene=metI;locus_tag=EC55989_0196
NC_011748.1	RefSeq	CDS	221465	222118	.	-	0	ID=cds187;Name=YP_002401331.1;Parent=gene198;Note=part of the MetNIQ methionine uptake system;Dbxref=Genbank:YP_002401331.1,GeneID:7146836;gbkey=CDS;product=DL-methionine transporter permease;protein_id=YP_002401331.1;transl_table=11
NC_011748.1	RefSeq	gene	222111	223142	.	-	.	ID=gene199;Name=metN;Dbxref=GeneID:7146831;gbkey=Gene;gene=metN;locus_tag=EC55989_0197
NC_011748.1	RefSeq	CDS	222111	223142	.	-	0	ID=cds188;Name=YP_002401332.1;Parent=gene199;Note=part of the metNIQ transport system for methionine;Dbxref=Genbank:YP_002401332.1,GeneID:7146831;gbkey=CDS;product=DL-methionine transporter ATP-binding subunit;protein_id=YP_002401332.1;transl_table=11
NC_011748.1	RefSeq	gene	223330	223902	.	+	.	ID=gene200;Name=gmhB;Dbxref=GeneID:7146835;gbkey=Gene;gene=gmhB;locus_tag=EC55989_0198
NC_011748.1	RefSeq	CDS	223330	223902	.	+	0	ID=cds189;Name=YP_002401333.1;Parent=gene200;Note=Converts the D-glycero-beta-D-manno-heptose 1%2C7-bisphosphate intermediate into D-glycero-beta-D-manno-heptose 1-phosphate;Dbxref=Genbank:YP_002401333.1,GeneID:7146835;gbkey=CDS;product=D%2CD-heptose 1%2C7-bisphosphate phosphatase;protein_id=YP_002401333.1;transl_table=11
NC_011748.1	RefSeq	gene	224266	225807	.	+	.	ID=gene201;Name=EC55989_16S_3;Dbxref=GeneID:7146343;gbkey=Gene;locus_tag=EC55989_16S_3
NC_011748.1	RefSeq	rRNA	224266	225807	.	+	.	ID=rna7;Parent=gene201;Dbxref=GeneID:7146343;gbkey=rRNA;product=ribosomal RNA 16S
NC_011748.1	RefSeq	exon	224266	225807	.	+	.	ID=id13;Parent=rna7;Dbxref=GeneID:7146343;gbkey=rRNA;product=ribosomal RNA 16S
NC_011748.1	RefSeq	gene	225876	225952	.	+	.	ID=gene202;Name=EC55989_tRNA1;Dbxref=GeneID:7144634;gbkey=Gene;locus_tag=EC55989_tRNA1
NC_011748.1	RefSeq	tRNA	225876	225952	.	+	.	ID=rna8;Dbxref=GeneID:7144634;gbkey=tRNA;product=tRNA-Ile
NC_011748.1	RefSeq	exon	225876	225952	.	+	.	ID=id14;Parent=rna8;Dbxref=GeneID:7144634;gbkey=tRNA;product=tRNA-Ile
NC_011748.1	RefSeq	gene	225995	226070	.	+	.	ID=gene203;Name=EC55989_tRNA2;Dbxref=GeneID:7145317;gbkey=Gene;locus_tag=EC55989_tRNA2
NC_011748.1	RefSeq	tRNA	225995	226070	.	+	.	ID=rna9;Dbxref=GeneID:7145317;gbkey=tRNA;product=tRNA-Ala
NC_011748.1	RefSeq	exon	225995	226070	.	+	.	ID=id15;Parent=rna9;Dbxref=GeneID:7145317;gbkey=tRNA;product=tRNA-Ala
NC_011748.1	RefSeq	gene	226254	229157	.	+	.	ID=gene204;Name=EC55989_23S_3;Dbxref=GeneID:7145328;gbkey=Gene;locus_tag=EC55989_23S_3
NC_011748.1	RefSeq	rRNA	226254	229157	.	+	.	ID=rna10;Parent=gene204;Dbxref=GeneID:7145328;gbkey=rRNA;product=ribosomal RNA 23S
NC_011748.1	RefSeq	exon	226254	229157	.	+	.	ID=id16;Parent=rna10;Dbxref=GeneID:7145328;gbkey=rRNA;product=ribosomal RNA 23S
NC_011748.1	RefSeq	gene	229251	229370	.	+	.	ID=gene205;Name=EC55989_5S_4;Dbxref=GeneID:7144761;gbkey=Gene;locus_tag=EC55989_5S_4
NC_011748.1	RefSeq	rRNA	229251	229370	.	+	.	ID=rna11;Parent=gene205;Dbxref=GeneID:7144761;gbkey=rRNA;product=ribosomal RNA 5S
NC_011748.1	RefSeq	exon	229251	229370	.	+	.	ID=id17;Parent=rna11;Dbxref=GeneID:7144761;gbkey=rRNA;product=ribosomal RNA 5S
NC_011748.1	RefSeq	gene	229475	229750	.	+	.	ID=gene206;Name=EC55989_0204;Dbxref=GeneID:7145290;gbkey=Gene;locus_tag=EC55989_0204
NC_011748.1	RefSeq	CDS	229475	229750	.	+	0	ID=cds190;Name=YP_002401334.1;Parent=gene206;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002401334.1,GeneID:7145290;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401334.1;transl_table=11
NC_011748.1	RefSeq	gene	229562	229638	.	+	.	ID=gene207;Name=EC55989_tRNA3;Dbxref=GeneID:7144364;gbkey=Gene;locus_tag=EC55989_tRNA3
NC_011748.1	RefSeq	tRNA	229562	229638	.	+	.	ID=rna12;Dbxref=GeneID:7144364;gbkey=tRNA;product=tRNA-Asp
NC_011748.1	RefSeq	exon	229562	229638	.	+	.	ID=id18;Parent=rna12;Dbxref=GeneID:7144364;gbkey=tRNA;product=tRNA-Asp
NC_011748.1	RefSeq	gene	229800	230603	.	+	.	ID=gene208;Name=dkgB;Dbxref=GeneID:7145339;gbkey=Gene;gene=dkgB;locus_tag=EC55989_0205
NC_011748.1	RefSeq	CDS	229800	230603	.	+	0	ID=cds191;Name=YP_002401335.1;Parent=gene208;Note=catalyzes the reduction of 2%2C5-diketo-D-gluconic acid to 2-keto-L-gulonic acid;Dbxref=Genbank:YP_002401335.1,GeneID:7145339;gbkey=CDS;product=2%2C5-diketo-D-gluconate reductase B;protein_id=YP_002401335.1;transl_table=11
NC_011748.1	RefSeq	gene	230653	230722	.	-	.	ID=gene209;Name=RNAout;Dbxref=GeneID:7145925;gbkey=Gene;gene=RNAout;locus_tag=EC55989_misc_RNA_8
NC_011748.1	RefSeq	transcript	230653	230722	.	-	.	ID=rna13;Parent=gene209;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 1691096%3B Product type n : RNA;Dbxref=GeneID:7145925;gbkey=misc_RNA;product=RNAout
NC_011748.1	RefSeq	exon	230653	230722	.	-	.	ID=id19;Parent=rna13;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 1691096%3B Product type n : RNA;Dbxref=GeneID:7145925;gbkey=misc_RNA;product=RNAout
NC_011748.1	RefSeq	gene	230714	231922	.	+	.	ID=gene210;Name=EC55989_0206;Dbxref=GeneID:7147443;gbkey=Gene;locus_tag=EC55989_0206
NC_011748.1	RefSeq	CDS	230714	231922	.	+	0	ID=cds192;Name=YP_002401336.1;Parent=gene210;Note=Evidence 2b : Function of strongly homologous gene%3B PubMedId : 10781570%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002401336.1,GeneID:7147443;gbkey=CDS;product=transposase%2C IS4 family%2C IS10L;protein_id=YP_002401336.1;transl_table=11
NC_011748.1	RefSeq	gene	231938	232852	.	-	.	ID=gene211;Name=yafC;Dbxref=GeneID:7144365;gbkey=Gene;gene=yafC;locus_tag=EC55989_0207
NC_011748.1	RefSeq	CDS	231938	232852	.	-	0	ID=cds193;Name=YP_002401337.1;Parent=gene211;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pr :  regulator;Dbxref=Genbank:YP_002401337.1,GeneID:7144365;gbkey=CDS;product=DNA-binding transcriptional regulator;protein_id=YP_002401337.1;transl_table=11
NC_011748.1	RefSeq	gene	233093	233893	.	+	.	ID=gene212;Name=yafD;Dbxref=GeneID:7148036;gbkey=Gene;gene=yafD;locus_tag=EC55989_0208
NC_011748.1	RefSeq	CDS	233093	233893	.	+	0	ID=cds194;Name=YP_002401338.1;Parent=gene212;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 1663890;Dbxref=Genbank:YP_002401338.1,GeneID:7148036;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401338.1;transl_table=11
NC_011748.1	RefSeq	gene	233971	234741	.	+	.	ID=gene213;Name=yafE;Dbxref=GeneID:7148037;gbkey=Gene;gene=yafE;locus_tag=EC55989_0209
NC_011748.1	RefSeq	CDS	233971	234741	.	+	0	ID=cds195;Name=YP_002401339.1;Parent=gene213;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002401339.1,GeneID:7148037;gbkey=CDS;product=S-adenosyl-L-methionine-dependent methyltransferase;protein_id=YP_002401339.1;transl_table=11
NC_011748.1	RefSeq	gene	234789	236147	.	-	.	ID=gene214;Name=mltD;Dbxref=GeneID:7148038;gbkey=Gene;gene=mltD;locus_tag=EC55989_0210
NC_011748.1	RefSeq	CDS	234789	236147	.	-	0	ID=cds196;Name=YP_002401340.1;Parent=gene214;Note=catalyzes the cleavage of the beta-1%2C4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues%3B may play a role in recycling muropeptides during cell division and%2For cell elongation%3B in Helicobacter pylori MltD is a endolytic transglycosylase involved mainly in the rearrangement of the peptidoglycan layer of the bacterial cell wall;Dbxref=Genbank:YP_002401340.1,GeneID:7148038;gbkey=CDS;product=membrane-bound lytic murein transglycosylase D;protein_id=YP_002401340.1;transl_table=11
NC_011748.1	RefSeq	gene	236219	236974	.	-	.	ID=gene215;Name=gloB;Dbxref=GeneID:7146866;gbkey=Gene;gene=gloB;locus_tag=EC55989_0211
NC_011748.1	RefSeq	CDS	236219	236974	.	-	0	ID=cds197;Name=YP_002401341.1;Parent=gene215;Note=catalyzes the hydrolysis of S-D-lactoylglutathione to D-lactic acid and reduced glutathione%3B plays an important role in cellular detoxification using glutathione;Dbxref=Genbank:YP_002401341.1,GeneID:7146866;gbkey=CDS;product=hydroxyacylglutathione hydrolase;protein_id=YP_002401341.1;transl_table=11
NC_011748.1	RefSeq	gene	237008	237730	.	+	.	ID=gene216;Name=yafS;Dbxref=GeneID:7146314;gbkey=Gene;gene=yafS;locus_tag=EC55989_0212
NC_011748.1	RefSeq	CDS	237008	237730	.	+	0	ID=cds198;Name=YP_002401342.1;Parent=gene216;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002401342.1,GeneID:7146314;gbkey=CDS;product=S-adenosyl-L-methionine-dependent methyltransferase;protein_id=YP_002401342.1;transl_table=11
NC_011748.1	RefSeq	gene	237727	238194	.	-	.	ID=gene217;Name=rnhA;Dbxref=GeneID:7148044;gbkey=Gene;gene=rnhA;locus_tag=EC55989_0213
NC_011748.1	RefSeq	CDS	237727	238194	.	-	0	ID=cds199;Name=YP_002401343.1;Parent=gene217;Note=An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids;Dbxref=Genbank:YP_002401343.1,GeneID:7148044;gbkey=CDS;product=ribonuclease H;protein_id=YP_002401343.1;transl_table=11
NC_011748.1	RefSeq	gene	238259	238990	.	+	.	ID=gene218;Name=dnaQ;Dbxref=GeneID:7147450;gbkey=Gene;gene=dnaQ;locus_tag=EC55989_0214
NC_011748.1	RefSeq	CDS	238259	238990	.	+	0	ID=cds200;Name=YP_002401344.1;Parent=gene218;Note=3%27-5%27 exonuclease of DNA polymerase III;Dbxref=Genbank:YP_002401344.1,GeneID:7147450;gbkey=CDS;product=DNA polymerase III subunit epsilon;protein_id=YP_002401344.1;transl_table=11
NC_011748.1	RefSeq	gene	239123	239199	.	+	.	ID=gene219;Name=EC55989_tRNA4;Dbxref=GeneID:7145940;gbkey=Gene;locus_tag=EC55989_tRNA4
NC_011748.1	RefSeq	tRNA	239123	239199	.	+	.	ID=rna14;Dbxref=GeneID:7145940;gbkey=tRNA;product=tRNA-Asp
NC_011748.1	RefSeq	exon	239123	239199	.	+	.	ID=id20;Parent=rna14;Dbxref=GeneID:7145940;gbkey=tRNA;product=tRNA-Asp
NC_011748.1	RefSeq	gene	239526	240311	.	+	.	ID=gene220;Name=yafT;Dbxref=GeneID:7145350;gbkey=Gene;gene=yafT;locus_tag=EC55989_0216
NC_011748.1	RefSeq	CDS	239526	240311	.	+	0	ID=cds201;Name=YP_002401345.1;Parent=gene220;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002401345.1,GeneID:7145350;gbkey=CDS;product=aminopeptidase;protein_id=YP_002401345.1;transl_table=11
NC_011748.1	RefSeq	gene	240653	240777	.	+	.	ID=gene221;Name=C0067;Dbxref=GeneID:7148045;gbkey=Gene;gene=C0067;locus_tag=EC55989_misc_RNA_9
NC_011748.1	RefSeq	transcript	240653	240777	.	+	.	ID=rna15;Parent=gene221;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 12202758%3B Product type n : RNA;Dbxref=GeneID:7148045;gbkey=misc_RNA;product=C0067
NC_011748.1	RefSeq	exon	240653	240777	.	+	.	ID=id21;Parent=rna15;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 12202758%3B Product type n : RNA;Dbxref=GeneID:7148045;gbkey=misc_RNA;product=C0067
NC_011748.1	RefSeq	gene	240937	241866	.	-	.	ID=gene222;Name=yafU;Dbxref=GeneID:7145647;gbkey=Gene;gene=yafU;locus_tag=EC55989_0217
NC_011748.1	RefSeq	CDS	240937	241866	.	-	0	ID=cds202;Name=YP_002401346.1;Parent=gene222;Note=Evidence 2b : Function of strongly homologous gene%3B PubMedId : 15919996%3B Product type m : membrane component;Dbxref=Genbank:YP_002401346.1,GeneID:7145647;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401346.1;transl_table=11
NC_011748.1	RefSeq	gene	241895	242377	.	-	.	ID=gene223;Name=EC55989_0218;Dbxref=GeneID:7148046;gbkey=Gene;locus_tag=EC55989_0218
NC_011748.1	RefSeq	CDS	241895	242377	.	-	0	ID=cds203;Name=YP_002401347.1;Parent=gene223;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002401347.1,GeneID:7148046;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401347.1;transl_table=11
NC_011748.1	RefSeq	gene	242401	243843	.	-	.	ID=gene224;Name=EC55989_0219;Dbxref=GeneID:7144366;gbkey=Gene;locus_tag=EC55989_0219
NC_011748.1	RefSeq	CDS	242401	243843	.	-	0	ID=cds204;Name=YP_002401348.1;Parent=gene224;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002401348.1,GeneID:7144366;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401348.1;transl_table=11
NC_011748.1	RefSeq	gene	243764	247288	.	-	.	ID=gene225;Name=EC55989_0220;Dbxref=GeneID:7144367;gbkey=Gene;locus_tag=EC55989_0220
NC_011748.1	RefSeq	CDS	243764	247288	.	-	0	ID=cds205;Name=YP_002401349.1;Parent=gene225;Note=Evidence 2b : Function of strongly homologous gene%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002401349.1,GeneID:7144367;gbkey=CDS;product=IcmF-like protein;protein_id=YP_002401349.1;transl_table=11
NC_011748.1	RefSeq	gene	247307	248788	.	-	.	ID=gene226;Name=EC55989_0221;Dbxref=GeneID:7144368;gbkey=Gene;locus_tag=EC55989_0221
NC_011748.1	RefSeq	CDS	247307	248788	.	-	0	ID=cds206;Name=YP_002401350.1;Parent=gene226;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002401350.1,GeneID:7144368;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401350.1;transl_table=11
NC_011748.1	RefSeq	gene	248727	249470	.	-	.	ID=gene227;Name=EC55989_0222;Dbxref=GeneID:7144369;gbkey=Gene;locus_tag=EC55989_0222
NC_011748.1	RefSeq	CDS	248727	249470	.	-	0	ID=cds207;Name=YP_002401351.1;Parent=gene227;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002401351.1,GeneID:7144369;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401351.1;transl_table=11
NC_011748.1	RefSeq	gene	249467	252340	.	-	.	ID=gene228;Name=EC55989_0223;Dbxref=GeneID:7144370;gbkey=Gene;locus_tag=EC55989_0223
NC_011748.1	RefSeq	CDS	249467	252340	.	-	0	ID=cds208;Name=YP_002401352.1;Parent=gene228;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pf :  factor;Dbxref=Genbank:YP_002401352.1,GeneID:7144370;gbkey=CDS;product=ATP-dependent Clp proteinase Aec27 ATP-binding chain%2C with chaperone activity;protein_id=YP_002401352.1;transl_table=11
NC_011748.1	RefSeq	gene	252235	252996	.	-	.	ID=gene229;Name=EC55989_0224;Dbxref=GeneID:7144371;gbkey=Gene;locus_tag=EC55989_0224
NC_011748.1	RefSeq	CDS	252235	252996	.	-	0	ID=cds209;Name=YP_002401353.1;Parent=gene229;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002401353.1,GeneID:7144371;gbkey=CDS;product=membrane protein Aec26;protein_id=YP_002401353.1;transl_table=11
NC_011748.1	RefSeq	gene	253001	254332	.	-	.	ID=gene230;Name=EC55989_0225;Dbxref=GeneID:7144372;gbkey=Gene;locus_tag=EC55989_0225
NC_011748.1	RefSeq	CDS	253001	254332	.	-	0	ID=cds210;Name=YP_002401354.1;Parent=gene230;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002401354.1,GeneID:7144372;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401354.1;transl_table=11
NC_011748.1	RefSeq	gene	254335	254859	.	-	.	ID=gene231;Name=EC55989_0226;Dbxref=GeneID:7144373;gbkey=Gene;locus_tag=EC55989_0226
NC_011748.1	RefSeq	CDS	254335	254859	.	-	0	ID=cds211;Name=YP_002401355.1;Parent=gene231;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002401355.1,GeneID:7144373;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401355.1;transl_table=11
NC_011748.1	RefSeq	gene	254856	256157	.	-	.	ID=gene232;Name=EC55989_0227;Dbxref=GeneID:7144374;gbkey=Gene;locus_tag=EC55989_0227
NC_011748.1	RefSeq	CDS	254856	256157	.	-	0	ID=cds212;Name=YP_002401356.1;Parent=gene232;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002401356.1,GeneID:7144374;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401356.1;transl_table=11
NC_011748.1	RefSeq	gene	256161	257249	.	-	.	ID=gene233;Name=EC55989_0228;Dbxref=GeneID:7144375;gbkey=Gene;locus_tag=EC55989_0228
NC_011748.1	RefSeq	CDS	256161	257249	.	-	0	ID=cds213;Name=YP_002401357.1;Parent=gene233;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002401357.1,GeneID:7144375;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401357.1;transl_table=11
NC_011748.1	RefSeq	gene	257207	259057	.	-	.	ID=gene234;Name=EC55989_0229;Dbxref=GeneID:7144376;gbkey=Gene;locus_tag=EC55989_0229
NC_011748.1	RefSeq	CDS	257207	259057	.	-	0	ID=cds214;Name=YP_002401358.1;Parent=gene234;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002401358.1,GeneID:7144376;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401358.1;transl_table=11
NC_011748.1	RefSeq	gene	259061	259474	.	-	.	ID=gene235;Name=EC55989_0230;Dbxref=GeneID:7144377;gbkey=Gene;locus_tag=EC55989_0230
NC_011748.1	RefSeq	CDS	259061	259474	.	-	0	ID=cds215;Name=YP_002401359.1;Parent=gene235;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002401359.1,GeneID:7144377;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401359.1;transl_table=11
NC_011748.1	RefSeq	gene	259481	260956	.	-	.	ID=gene236;Name=EC55989_0231;Dbxref=GeneID:7144378;gbkey=Gene;locus_tag=EC55989_0231
NC_011748.1	RefSeq	CDS	259481	260956	.	-	0	ID=cds216;Name=YP_002401360.1;Parent=gene236;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002401360.1,GeneID:7144378;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401360.1;transl_table=11
NC_011748.1	RefSeq	gene	261007	261231	.	-	.	ID=gene237;Name=EC55989_0232;Dbxref=GeneID:7144379;gbkey=Gene;locus_tag=EC55989_0232
NC_011748.1	RefSeq	CDS	261007	261231	.	-	0	ID=cds217;Name=YP_002401361.1;Parent=gene237;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002401361.1,GeneID:7144379;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401361.1;transl_table=11
NC_011748.1	RefSeq	gene	261266	261766	.	-	.	ID=gene238;Name=EC55989_0233;Dbxref=GeneID:7144380;gbkey=Gene;locus_tag=EC55989_0233
NC_011748.1	RefSeq	CDS	261266	261766	.	-	0	ID=cds218;Name=YP_002401362.1;Parent=gene238;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002401362.1,GeneID:7144380;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401362.1;transl_table=11
NC_011748.1	RefSeq	gene	262193	262336	.	+	.	ID=gene239;Name=EC55989_0234;Dbxref=GeneID:7144381;gbkey=Gene;locus_tag=EC55989_0234
NC_011748.1	RefSeq	CDS	262193	262336	.	+	0	ID=cds219;Name=YP_002401363.1;Parent=gene239;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002401363.1,GeneID:7144381;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401363.1;transl_table=11
NC_011748.1	RefSeq	gene	262463	262981	.	+	.	ID=gene240;Name=EC55989_0235;Dbxref=GeneID:7144382;gbkey=Gene;locus_tag=EC55989_0235
NC_011748.1	RefSeq	CDS	262463	262981	.	+	0	ID=cds220;Name=YP_002401364.1;Parent=gene240;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002401364.1,GeneID:7144382;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401364.1;transl_table=11
NC_011748.1	RefSeq	gene	263191	265332	.	+	.	ID=gene241;Name=EC55989_0236;Dbxref=GeneID:7144383;gbkey=Gene;locus_tag=EC55989_0236
NC_011748.1	RefSeq	CDS	263191	265332	.	+	0	ID=cds221;Name=YP_002401365.1;Parent=gene241;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002401365.1,GeneID:7144383;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401365.1;transl_table=11
NC_011748.1	RefSeq	gene	265408	267912	.	+	.	ID=gene242;Name=EC55989_0237;Dbxref=GeneID:7144384;gbkey=Gene;locus_tag=EC55989_0237;pseudo=true
NC_011748.1	RefSeq	region	265408	267912	.	+	.	ID=id22;Note=fragment of  Rhs Core protein %28part 1%29%3BEvidence 7 : Gene remnant%3B Product type h : extrachromosomal origin;Dbxref=GeneID:7144384;gbkey=misc_feature
NC_011748.1	RefSeq	gene	267746	269071	.	+	.	ID=gene243;Name=rhsE;Dbxref=GeneID:7144385;gbkey=Gene;gene=rhsE;locus_tag=EC55989_0238;pseudo=true
NC_011748.1	RefSeq	region	267746	269071	.	+	.	ID=id23;Note=fragment of rhsE element core protein RshE %28partial%29%3BEvidence 7 : Gene remnant%3B Product type h : extrachromosomal origin;Dbxref=GeneID:7144385;gbkey=misc_feature
NC_011748.1	RefSeq	gene	269055	269537	.	+	.	ID=gene244;Name=ydcD;Dbxref=GeneID:7147405;gbkey=Gene;gene=ydcD;locus_tag=EC55989_0239
NC_011748.1	RefSeq	CDS	269055	269537	.	+	0	ID=cds222;Name=YP_002401366.1;Parent=gene244;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002401366.1,GeneID:7147405;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401366.1;transl_table=11
NC_011748.1	RefSeq	gene	269718	270464	.	+	.	ID=gene245;Name=yncI;Dbxref=GeneID:7148384;gbkey=Gene;gene=yncI;locus_tag=EC55989_0240
NC_011748.1	RefSeq	CDS	269718	270464	.	+	0	ID=cds223;Name=YP_002401367.1;Parent=gene245;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 7868617%2C 8387990;Dbxref=Genbank:YP_002401367.1,GeneID:7148384;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401367.1;transl_table=11
NC_011748.1	RefSeq	gene	270508	270708	.	+	.	ID=gene246;Name=yncM;Dbxref=GeneID:7149297;gbkey=Gene;gene=yncM;locus_tag=EC55989_0241
NC_011748.1	RefSeq	CDS	270508	270708	.	+	0	ID=cds224;Name=YP_002401368.1;Parent=gene246;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 7868617%2C 8387990;Dbxref=Genbank:YP_002401368.1,GeneID:7149297;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401368.1;transl_table=11
NC_011748.1	RefSeq	gene	271022	272083	.	+	.	ID=gene247;Name=yhhI;Dbxref=GeneID:7149299;gbkey=Gene;gene=yhhI;locus_tag=EC55989_0242
NC_011748.1	RefSeq	CDS	271022	272083	.	+	0	ID=cds225;Name=YP_002401369.1;Parent=gene247;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type ph : phenotype;Dbxref=Genbank:YP_002401369.1,GeneID:7149299;gbkey=CDS;product=transposase;protein_id=YP_002401369.1;transl_table=11
NC_011748.1	RefSeq	gene	272125	272895	.	-	.	ID=gene248;Name=yafV;Dbxref=GeneID:7148979;gbkey=Gene;gene=yafV;locus_tag=EC55989_0243
NC_011748.1	RefSeq	CDS	272125	272895	.	-	0	ID=cds226;Name=YP_002401370.1;Parent=gene248;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 8526497%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002401370.1,GeneID:7148979;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401370.1;transl_table=11
NC_011748.1	RefSeq	gene	273049	273522	.	+	.	ID=gene249;Name=ivy;Dbxref=GeneID:7148047;gbkey=Gene;gene=ivy;locus_tag=EC55989_0244
NC_011748.1	RefSeq	CDS	273049	273522	.	+	0	ID=cds227;Name=YP_002401371.1;Parent=gene249;Note=inactivates vertebrate C-type lysozyme;Dbxref=Genbank:YP_002401371.1,GeneID:7148047;gbkey=CDS;product=C-lysozyme inhibitor;protein_id=YP_002401371.1;transl_table=11
NC_011748.1	RefSeq	gene	273565	276009	.	-	.	ID=gene250;Name=fadE;Dbxref=GeneID:7146643;gbkey=Gene;gene=fadE;locus_tag=EC55989_0245
NC_011748.1	RefSeq	CDS	273565	276009	.	-	0	ID=cds228;Name=YP_002401372.1;Parent=gene250;Note=functions in fatty acid oxidation%3B converts acyl-CoA and FAD to FADH2 and delta2-enoyl-CoA;Dbxref=Genbank:YP_002401372.1,GeneID:7146643;gbkey=CDS;product=acyl-CoA dehydrogenase;protein_id=YP_002401372.1;transl_table=11
NC_011748.1	RefSeq	gene	276249	276827	.	+	.	ID=gene251;Name=gmhA;Dbxref=GeneID:7146058;gbkey=Gene;gene=gmhA;locus_tag=EC55989_0246
NC_011748.1	RefSeq	CDS	276249	276827	.	+	0	ID=cds229;Name=YP_002401373.1;Parent=gene251;Note=catalyzes the isomerization of sedoheptulose 7-phosphate to D-glycero-D-manno-heptose 7-phosphate;Dbxref=Genbank:YP_002401373.1,GeneID:7146058;gbkey=CDS;product=phosphoheptose isomerase;protein_id=YP_002401373.1;transl_table=11
NC_011748.1	RefSeq	gene	277033	277800	.	+	.	ID=gene252;Name=yafJ;Dbxref=GeneID:7146721;gbkey=Gene;gene=yafJ;locus_tag=EC55989_0247
NC_011748.1	RefSeq	CDS	277033	277800	.	+	0	ID=cds230;Name=YP_002401374.1;Parent=gene252;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002401374.1,GeneID:7146721;gbkey=CDS;product=class-II glutamine amidotransferase;protein_id=YP_002401374.1;transl_table=11
NC_011748.1	RefSeq	gene	277771	278511	.	-	.	ID=gene253;Name=yafK;Dbxref=GeneID:7148039;gbkey=Gene;gene=yafK;locus_tag=EC55989_0248
NC_011748.1	RefSeq	CDS	277771	278511	.	-	0	ID=cds231;Name=YP_002401375.1;Parent=gene253;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002401375.1,GeneID:7148039;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401375.1;transl_table=11
NC_011748.1	RefSeq	gene	278667	278945	.	-	.	ID=gene254;Name=yafQ;Dbxref=GeneID:7148040;gbkey=Gene;gene=yafQ;locus_tag=EC55989_0249
NC_011748.1	RefSeq	CDS	278667	278945	.	-	0	ID=cds232;Name=YP_002401376.1;Parent=gene254;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 15009896%3B Product type f : factor;Dbxref=Genbank:YP_002401376.1,GeneID:7148040;gbkey=CDS;product=toxin of the YafQ-DinJ toxin-antitoxin system;protein_id=YP_002401376.1;transl_table=11
NC_011748.1	RefSeq	gene	278948	279208	.	-	.	ID=gene255;Name=dinJ;Dbxref=GeneID:7148043;gbkey=Gene;gene=dinJ;locus_tag=EC55989_0250
NC_011748.1	RefSeq	CDS	278948	279208	.	-	0	ID=cds233;Name=YP_002401377.1;Parent=gene255;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 99451883%3B Product type pf :  factor;Dbxref=Genbank:YP_002401377.1,GeneID:7148043;gbkey=CDS;product=antitoxin of YafQ-DinJ toxin-antitoxin system;protein_id=YP_002401377.1;transl_table=11
NC_011748.1	RefSeq	gene	279418	280167	.	+	.	ID=gene256;Name=yafL;Dbxref=GeneID:7145919;gbkey=Gene;gene=yafL;locus_tag=EC55989_0251
NC_011748.1	RefSeq	CDS	279418	280167	.	+	0	ID=cds234;Name=YP_002401378.1;Parent=gene256;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002401378.1,GeneID:7145919;gbkey=CDS;product=hydrolase;protein_id=YP_002401378.1;transl_table=11
NC_011748.1	RefSeq	gene	280224	280580	.	-	.	ID=gene257;Name=EC55989_0252;Dbxref=GeneID:7148041;gbkey=Gene;locus_tag=EC55989_0252
NC_011748.1	RefSeq	CDS	280224	280580	.	-	0	ID=cds235;Name=YP_002401379.1;Parent=gene257;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002401379.1,GeneID:7148041;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401379.1;transl_table=11
NC_011748.1	RefSeq	gene	280573	280872	.	-	.	ID=gene258;Name=EC55989_0253;Dbxref=GeneID:7144386;gbkey=Gene;locus_tag=EC55989_0253
NC_011748.1	RefSeq	CDS	280573	280872	.	-	0	ID=cds236;Name=YP_002401380.1;Parent=gene258;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002401380.1,GeneID:7144386;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401380.1;transl_table=11
NC_011748.1	RefSeq	gene	280956	282695	.	-	.	ID=gene259;Name=fhiA;Dbxref=GeneID:7144387;gbkey=Gene;gene=fhiA;locus_tag=EC55989_0254
NC_011748.1	RefSeq	CDS	280956	282695	.	-	0	ID=cds237;Name=YP_002401381.1;Parent=gene259;Note=Evidence 7 : Gene remnant%3B Product type s : structure;Dbxref=Genbank:YP_002401381.1,GeneID:7144387;gbkey=CDS;product=flagellar system protein;protein_id=YP_002401381.1;transl_table=11
NC_011748.1	RefSeq	gene	282535	283425	.	+	.	ID=gene260;Name=mbhA;Dbxref=GeneID:7146097;gbkey=Gene;gene=mbhA;locus_tag=EC55989_0255
NC_011748.1	RefSeq	CDS	282535	283425	.	+	0	ID=cds238;Name=YP_002401382.1;Parent=gene260;Note=Evidence 2b : Function of strongly homologous gene%3B PubMedId : 15687208%3B Product type s : structure;Dbxref=Genbank:YP_002401382.1,GeneID:7146097;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401382.1;transl_table=11
NC_011748.1	RefSeq	gene	283496	284551	.	+	.	ID=gene261;Name=dinB;Dbxref=GeneID:7146792;gbkey=Gene;gene=dinB;locus_tag=EC55989_0256
NC_011748.1	RefSeq	CDS	283496	284551	.	+	0	ID=cds239;Name=YP_002401383.1;Parent=gene261;Note=involved in translesion DNA polymerization with beta clamp of polymerase III%3B belongs to Y family of polymerases%3B does not contain proofreading function;Dbxref=Genbank:YP_002401383.1,GeneID:7146792;gbkey=CDS;product=DNA polymerase IV;protein_id=YP_002401383.1;transl_table=11
NC_011748.1	RefSeq	gene	284548	284934	.	+	.	ID=gene262;Name=yafP;Dbxref=GeneID:7145914;gbkey=Gene;gene=yafP;locus_tag=EC55989_0257;pseudo=true
NC_011748.1	RefSeq	region	284548	284934	.	+	.	ID=id24;Note=fragment of  acyltransferase with acyl-CoA N-acyltransferase domain %28partial%29%3BEvidence 7 : Gene remnant%3B Product type pe :  enzyme;Dbxref=GeneID:7145914;gbkey=misc_feature
NC_011748.1	RefSeq	gene	284903	286111	.	-	.	ID=gene263;Name=EC55989_0258;Dbxref=GeneID:7148042;gbkey=Gene;locus_tag=EC55989_0258
NC_011748.1	RefSeq	CDS	284903	286111	.	-	0	ID=cds240;Name=YP_002401384.1;Parent=gene263;Note=Evidence 2b : Function of strongly homologous gene%3B PubMedId : 10781570%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002401384.1,GeneID:7148042;gbkey=CDS;product=transposase%2C IS4 family%2C IS10L;protein_id=YP_002401384.1;transl_table=11
NC_011748.1	RefSeq	gene	286103	286171	.	+	.	ID=gene264;Name=RNAout;Dbxref=GeneID:7144388;gbkey=Gene;gene=RNAout;locus_tag=EC55989_misc_RNA_10
NC_011748.1	RefSeq	transcript	286103	286171	.	+	.	ID=rna16;Parent=gene264;Note=Evidence 1c : Function experimentally demonstrated in the studied genus%3B PubMedId : 1691096%3B Product type n : RNA;Dbxref=GeneID:7144388;gbkey=misc_RNA;product=RNAout
NC_011748.1	RefSeq	exon	286103	286171	.	+	.	ID=id25;Parent=rna16;Note=Evidence 1c : Function experimentally demonstrated in the studied genus%3B PubMedId : 1691096%3B Product type n : RNA;Dbxref=GeneID:7144388;gbkey=misc_RNA;product=RNAout
NC_011748.1	RefSeq	gene	286557	287723	.	+	.	ID=gene265;Name=EC55989_0259;Dbxref=GeneID:7147437;gbkey=Gene;locus_tag=EC55989_0259
NC_011748.1	RefSeq	CDS	286557	287723	.	+	0	ID=cds241;Name=YP_002401385.1;Parent=gene265;Note=mutations in this gene result in a compromised ability for drug-inducible mexXY expression%3B expression is inducible by the same ribosome-targeting agents that induce mexXY;Dbxref=Genbank:YP_002401385.1,GeneID:7147437;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401385.1;transl_table=11
NC_011748.1	RefSeq	gene	287834	288334	.	+	.	ID=gene266;Name=prfH;Dbxref=GeneID:7144389;gbkey=Gene;gene=prfH;locus_tag=EC55989_0260
NC_011748.1	RefSeq	CDS	287834	288334	.	+	0	ID=cds242;Name=YP_002401386.1;Parent=gene266;Note=similar to release factor 1 and 2;Dbxref=Genbank:YP_002401386.1,GeneID:7144389;gbkey=CDS;product=peptide chain release factor-like protein;protein_id=YP_002401386.1;transl_table=11
NC_011748.1	RefSeq	gene	288391	289848	.	-	.	ID=gene267;Name=pepD;Dbxref=GeneID:7147243;gbkey=Gene;gene=pepD;locus_tag=EC55989_0261
NC_011748.1	RefSeq	CDS	288391	289848	.	-	0	ID=cds243;Name=YP_002401387.1;Parent=gene267;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 1695895%2C 21101837%2C 88121730%2C 92204123%2C 2651887%3B Product type e : enzyme;Dbxref=Genbank:YP_002401387.1,GeneID:7147243;gbkey=CDS;product=aminoacyl-histidine dipeptidase;protein_id=YP_002401387.1;transl_table=11
NC_011748.1	RefSeq	gene	290109	290567	.	+	.	ID=gene268;Name=gpt;Dbxref=GeneID:7147132;gbkey=Gene;gene=gpt;locus_tag=EC55989_0262
NC_011748.1	RefSeq	CDS	290109	290567	.	+	0	ID=cds244;Name=YP_002401388.1;Parent=gene268;Note=catalyzes the conversion of guanine%2C xanthine and%2C to a lesser extent%2C hypoxanthine to GMP%2C XMP and IMP%2C respectively;Dbxref=Genbank:YP_002401388.1,GeneID:7147132;gbkey=CDS;product=xanthine-guanine phosphoribosyltransferase;protein_id=YP_002401388.1;transl_table=11
NC_011748.1	RefSeq	gene	290659	291903	.	+	.	ID=gene269;Name=frsA;Dbxref=GeneID:7146364;gbkey=Gene;gene=frsA;locus_tag=EC55989_0263
NC_011748.1	RefSeq	CDS	290659	291903	.	+	0	ID=cds245;Name=YP_002401389.1;Parent=gene269;Note=forms a 1:1 complex with the unphosphorylated from of enzyme IIAGlc%3B FrsA may promote fermentation;Dbxref=Genbank:YP_002401389.1,GeneID:7146364;gbkey=CDS;product=fermentation%2Frespiration switch protein;protein_id=YP_002401389.1;transl_table=11
NC_011748.1	RefSeq	gene	291961	292362	.	+	.	ID=gene270;Name=crl;Dbxref=GeneID:7146194;gbkey=Gene;gene=crl;locus_tag=EC55989_0264
NC_011748.1	RefSeq	CDS	291961	292362	.	+	0	ID=cds246;Name=YP_002401390.1;Parent=gene270;Note=involved in the expression of csgBA which is involved in curli formation%3B interacts with sigmaS;Dbxref=Genbank:YP_002401390.1,GeneID:7146194;gbkey=CDS;product=DNA-binding transcriptional regulator Crl;protein_id=YP_002401390.1;transl_table=11
NC_011748.1	RefSeq	gene	292401	293456	.	-	.	ID=gene271;Name=phoE;Dbxref=GeneID:7145757;gbkey=Gene;gene=phoE;locus_tag=EC55989_0265
NC_011748.1	RefSeq	CDS	292401	293456	.	-	0	ID=cds247;Name=YP_002401391.1;Parent=gene271;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 89178658%2C 89380253%2C 92219258%2C 98090453%2C 1380671%2C 1848301%2C 1848682%2C 6089111%2C 6341601%2C 7679770%3B Product type t : transporter;Dbxref=Genbank:YP_002401391.1,GeneID:7145757;gbkey=CDS;product=outer membrane phosphoporin protein E;protein_id=YP_002401391.1;transl_table=11
NC_011748.1	RefSeq	gene	293744	294847	.	+	.	ID=gene272;Name=proB;Dbxref=GeneID:7147181;gbkey=Gene;gene=proB;locus_tag=EC55989_0266
NC_011748.1	RefSeq	CDS	293744	294847	.	+	0	ID=cds248;Name=YP_002401392.1;Parent=gene272;Note=catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis;Dbxref=Genbank:YP_002401392.1,GeneID:7147181;gbkey=CDS;product=gamma-glutamyl kinase;protein_id=YP_002401392.1;transl_table=11
NC_011748.1	RefSeq	gene	294859	296112	.	+	.	ID=gene273;Name=proA;Dbxref=GeneID:7147253;gbkey=Gene;gene=proA;locus_tag=EC55989_0267
NC_011748.1	RefSeq	CDS	294859	296112	.	+	0	ID=cds249;Name=YP_002401393.1;Parent=gene273;Note=Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway;Dbxref=Genbank:YP_002401393.1,GeneID:7147253;gbkey=CDS;product=gamma-glutamyl phosphate reductase;protein_id=YP_002401393.1;transl_table=11
NC_011748.1	RefSeq	gene	296227	296302	.	+	.	ID=gene274;Name=EC55989_tRNA5;Dbxref=GeneID:7147252;gbkey=Gene;locus_tag=EC55989_tRNA5
NC_011748.1	RefSeq	tRNA	296227	296302	.	+	.	ID=rna17;Dbxref=GeneID:7147252;gbkey=tRNA;product=tRNA-Thr
NC_011748.1	RefSeq	exon	296227	296302	.	+	.	ID=id26;Parent=rna17;Dbxref=GeneID:7147252;gbkey=tRNA;product=tRNA-Thr
NC_011748.1	RefSeq	gene	296469	297683	.	+	.	ID=gene275;Name=EC55989_0268;Dbxref=GeneID:7145361;gbkey=Gene;locus_tag=EC55989_0268
NC_011748.1	RefSeq	CDS	296469	297683	.	+	0	ID=cds250;Name=YP_002401394.1;Parent=gene275;Dbxref=Genbank:YP_002401394.1,GeneID:7145361;gbkey=CDS;product=prophage CPS-53 integrase;protein_id=YP_002401394.1;transl_table=11
NC_011748.1	RefSeq	gene	297806	298609	.	+	.	ID=gene276;Name=EC55989_0269;Dbxref=GeneID:7144390;gbkey=Gene;locus_tag=EC55989_0269
NC_011748.1	RefSeq	CDS	297806	298609	.	+	0	ID=cds251;Name=YP_002401395.1;Parent=gene276;Note=Evidence 5 : No homology to any previously reported sequences;Dbxref=Genbank:YP_002401395.1,GeneID:7144390;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401395.1;transl_table=11
NC_011748.1	RefSeq	gene	298804	299001	.	+	.	ID=gene277;Name=EC55989_0270;Dbxref=GeneID:7144391;gbkey=Gene;locus_tag=EC55989_0270
NC_011748.1	RefSeq	CDS	298804	299001	.	+	0	ID=cds252;Name=YP_002401396.1;Parent=gene277;Dbxref=Genbank:YP_002401396.1,GeneID:7144391;gbkey=CDS;product=Phage transcriptional regulator%2C AlpA;protein_id=YP_002401396.1;transl_table=11
NC_011748.1	RefSeq	gene	299080	299880	.	+	.	ID=gene278;Name=EC55989_0271;Dbxref=GeneID:7144392;gbkey=Gene;locus_tag=EC55989_0271
NC_011748.1	RefSeq	CDS	299080	299880	.	+	0	ID=cds253;Name=YP_002401397.1;Parent=gene278;Note=Evidence 2b : Function of strongly homologous gene%3B Product type pr :  regulator;Dbxref=Genbank:YP_002401397.1,GeneID:7144392;gbkey=CDS;product=AntA%2FAntB antirepressor;protein_id=YP_002401397.1;transl_table=11
NC_011748.1	RefSeq	gene	299873	301459	.	+	.	ID=gene279;Name=EC55989_0272;Dbxref=GeneID:7144393;gbkey=Gene;locus_tag=EC55989_0272
NC_011748.1	RefSeq	CDS	299873	301459	.	+	0	ID=cds254;Name=YP_002401398.1;Parent=gene279;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002401398.1,GeneID:7144393;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401398.1;transl_table=11
NC_011748.1	RefSeq	gene	300598	300903	.	-	.	ID=gene280;Name=EC55989_0273;Dbxref=GeneID:7144394;gbkey=Gene;locus_tag=EC55989_0273
NC_011748.1	RefSeq	CDS	300598	300903	.	-	0	ID=cds255;Name=YP_002401399.1;Parent=gene280;Dbxref=Genbank:YP_002401399.1,GeneID:7144394;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401399.1;transl_table=11
NC_011748.1	RefSeq	gene	301452	301817	.	+	.	ID=gene281;Name=EC55989_0274;Dbxref=GeneID:7144395;gbkey=Gene;locus_tag=EC55989_0274
NC_011748.1	RefSeq	CDS	301452	301817	.	+	0	ID=cds256;Name=YP_002401400.1;Parent=gene281;Note=Evidence 5 : No homology to any previously reported sequences;Dbxref=Genbank:YP_002401400.1,GeneID:7144395;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401400.1;transl_table=11
NC_011748.1	RefSeq	gene	301810	302010	.	+	.	ID=gene282;Name=EC55989_0275;Dbxref=GeneID:7144396;gbkey=Gene;locus_tag=EC55989_0275
NC_011748.1	RefSeq	CDS	301810	302010	.	+	0	ID=cds257;Name=YP_002401401.1;Parent=gene282;Dbxref=Genbank:YP_002401401.1,GeneID:7144396;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401401.1;transl_table=11
NC_011748.1	RefSeq	gene	302015	302305	.	+	.	ID=gene283;Name=EC55989_0276;Dbxref=GeneID:7144397;gbkey=Gene;locus_tag=EC55989_0276
NC_011748.1	RefSeq	CDS	302015	302305	.	+	0	ID=cds258;Name=YP_002401402.1;Parent=gene283;Dbxref=Genbank:YP_002401402.1,GeneID:7144397;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401402.1;transl_table=11
NC_011748.1	RefSeq	gene	302302	304434	.	+	.	ID=gene284;Name=EC55989_0277;Dbxref=GeneID:7144398;gbkey=Gene;locus_tag=EC55989_0277
NC_011748.1	RefSeq	CDS	302302	304434	.	+	0	ID=cds259;Name=YP_002401403.1;Parent=gene284;Dbxref=Genbank:YP_002401403.1,GeneID:7144398;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401403.1;transl_table=11
NC_011748.1	RefSeq	gene	304893	305450	.	+	.	ID=gene285;Name=EC55989_0278;Dbxref=GeneID:7144399;gbkey=Gene;locus_tag=EC55989_0278
NC_011748.1	RefSeq	CDS	304893	305450	.	+	0	ID=cds260;Name=YP_002401404.1;Parent=gene285;Dbxref=Genbank:YP_002401404.1,GeneID:7144399;gbkey=CDS;product=Activator of ProP osmoprotectant transporter;protein_id=YP_002401404.1;transl_table=11
NC_011748.1	RefSeq	gene	305447	305734	.	+	.	ID=gene286;Name=EC55989_0279;Dbxref=GeneID:7144400;gbkey=Gene;locus_tag=EC55989_0279
NC_011748.1	RefSeq	CDS	305447	305734	.	+	0	ID=cds261;Name=YP_002401405.1;Parent=gene286;Dbxref=Genbank:YP_002401405.1,GeneID:7144400;gbkey=CDS;product=Protein perC %28Protein bfpW%29;protein_id=YP_002401405.1;transl_table=11
NC_011748.1	RefSeq	gene	305869	307011	.	+	.	ID=gene287;Name=EC55989_0280;Dbxref=GeneID:7144401;gbkey=Gene;locus_tag=EC55989_0280
NC_011748.1	RefSeq	CDS	305869	307011	.	+	0	ID=cds262;Name=YP_002401406.1;Parent=gene287;Note=Evidence 5 : No homology to any previously reported sequences;Dbxref=Genbank:YP_002401406.1,GeneID:7144401;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401406.1;transl_table=11
NC_011748.1	RefSeq	gene	307076	307399	.	+	.	ID=gene288;Name=EC55989_0281;Dbxref=GeneID:7144402;gbkey=Gene;locus_tag=EC55989_0281
NC_011748.1	RefSeq	CDS	307076	307399	.	+	0	ID=cds263;Name=YP_002401407.1;Parent=gene288;Note=Evidence 5 : No homology to any previously reported sequences;Dbxref=Genbank:YP_002401407.1,GeneID:7144402;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401407.1;transl_table=11
NC_011748.1	RefSeq	gene	307842	308114	.	+	.	ID=gene289;Name=EC55989_0283;Dbxref=GeneID:7144403;gbkey=Gene;locus_tag=EC55989_0283
NC_011748.1	RefSeq	CDS	307842	308114	.	+	0	ID=cds264;Name=YP_002401408.1;Parent=gene289;Note=Evidence 5 : No homology to any previously reported sequences;Dbxref=Genbank:YP_002401408.1,GeneID:7144403;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401408.1;transl_table=11
NC_011748.1	RefSeq	gene	308196	308741	.	+	.	ID=gene290;Name=EC55989_0284;Dbxref=GeneID:7144404;gbkey=Gene;locus_tag=EC55989_0284
NC_011748.1	RefSeq	CDS	308196	308741	.	+	0	ID=cds265;Name=YP_002401409.1;Parent=gene290;Note=Evidence 5 : No homology to any previously reported sequences;Dbxref=Genbank:YP_002401409.1,GeneID:7144404;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401409.1;transl_table=11
NC_011748.1	RefSeq	gene	309345	310340	.	+	.	ID=gene291;Name=EC55989_0285;Dbxref=GeneID:7144405;gbkey=Gene;locus_tag=EC55989_0285
NC_011748.1	RefSeq	CDS	309345	310340	.	+	0	ID=cds266;Name=YP_002401410.1;Parent=gene291;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002401410.1,GeneID:7144405;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401410.1;transl_table=11
NC_011748.1	RefSeq	gene	310333	311313	.	+	.	ID=gene292;Name=EC55989_0286;Dbxref=GeneID:7144406;gbkey=Gene;locus_tag=EC55989_0286
NC_011748.1	RefSeq	CDS	310333	311313	.	+	0	ID=cds267;Name=YP_002401411.1;Parent=gene292;Note=Evidence 5 : No homology to any previously reported sequences;Dbxref=Genbank:YP_002401411.1,GeneID:7144406;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401411.1;transl_table=11
NC_011748.1	RefSeq	gene	311773	312183	.	-	.	ID=gene293;Name=yagP;Dbxref=GeneID:7144407;gbkey=Gene;gene=yagP;locus_tag=EC55989_0287
NC_011748.1	RefSeq	CDS	311773	312183	.	-	0	ID=cds268;Name=YP_002401412.1;Parent=gene293;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pr :  regulator;Dbxref=Genbank:YP_002401412.1,GeneID:7144407;gbkey=CDS;product=transcriptional regulator;protein_id=YP_002401412.1;transl_table=11
NC_011748.1	RefSeq	gene	312162	313118	.	-	.	ID=gene294;Name=yagQ;Dbxref=GeneID:7148048;gbkey=Gene;gene=yagQ;locus_tag=EC55989_0288
NC_011748.1	RefSeq	CDS	312162	313118	.	-	0	ID=cds269;Name=YP_002401413.1;Parent=gene294;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002401413.1,GeneID:7148048;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401413.1;transl_table=11
NC_011748.1	RefSeq	gene	313128	315326	.	-	.	ID=gene295;Name=yagR;Dbxref=GeneID:7148049;gbkey=Gene;gene=yagR;locus_tag=EC55989_0289
NC_011748.1	RefSeq	CDS	313128	315326	.	-	0	ID=cds270;Name=YP_002401414.1;Parent=gene295;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002401414.1,GeneID:7148049;gbkey=CDS;product=oxidoreductase with molybdenum-binding domain;protein_id=YP_002401414.1;transl_table=11
NC_011748.1	RefSeq	gene	315323	316279	.	-	.	ID=gene296;Name=yagS;Dbxref=GeneID:7148050;gbkey=Gene;gene=yagS;locus_tag=EC55989_0290
NC_011748.1	RefSeq	CDS	315323	316279	.	-	0	ID=cds271;Name=YP_002401415.1;Parent=gene296;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002401415.1,GeneID:7148050;gbkey=CDS;product=oxidoreductase with FAD-binding domain;protein_id=YP_002401415.1;transl_table=11
NC_011748.1	RefSeq	gene	316276	316965	.	-	.	ID=gene297;Name=yagT;Dbxref=GeneID:7148051;gbkey=Gene;gene=yagT;locus_tag=EC55989_0291
NC_011748.1	RefSeq	CDS	316276	316965	.	-	0	ID=cds272;Name=YP_002401416.1;Parent=gene297;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002401416.1,GeneID:7148051;gbkey=CDS;product=xanthine dehydrogenase iron-sulfur-binding subunit;protein_id=YP_002401416.1;transl_table=11
NC_011748.1	RefSeq	gene	317383	317997	.	+	.	ID=gene298;Name=yagU;Dbxref=GeneID:7148052;gbkey=Gene;gene=yagU;locus_tag=EC55989_0292
NC_011748.1	RefSeq	CDS	317383	317997	.	+	0	ID=cds273;Name=YP_002401417.1;Parent=gene298;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002401417.1,GeneID:7148052;gbkey=CDS;product=inner membrane protein;protein_id=YP_002401417.1;transl_table=11
NC_011748.1	RefSeq	gene	318887	319597	.	-	.	ID=gene299;Name=yagV;Dbxref=GeneID:7148053;gbkey=Gene;gene=yagV;locus_tag=EC55989_0293
NC_011748.1	RefSeq	CDS	318887	319597	.	-	0	ID=cds274;Name=YP_002401418.1;Parent=gene299;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002401418.1,GeneID:7148053;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401418.1;transl_table=11
NC_011748.1	RefSeq	gene	319566	321209	.	-	.	ID=gene300;Name=yagW;Dbxref=GeneID:7148055;gbkey=Gene;gene=yagW;locus_tag=EC55989_0294
NC_011748.1	RefSeq	CDS	319566	321209	.	-	0	ID=cds275;Name=YP_002401419.1;Parent=gene300;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pr :  regulator;Dbxref=Genbank:YP_002401419.1,GeneID:7148055;gbkey=CDS;product=surface or protein;protein_id=YP_002401419.1;transl_table=11
NC_011748.1	RefSeq	gene	321199	323724	.	-	.	ID=gene301;Name=yagX;Dbxref=GeneID:7148056;gbkey=Gene;gene=yagX;locus_tag=EC55989_0295
NC_011748.1	RefSeq	CDS	321199	323724	.	-	0	ID=cds276;Name=YP_002401420.1;Parent=gene301;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002401420.1,GeneID:7148056;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401420.1;transl_table=11
NC_011748.1	RefSeq	gene	323750	324418	.	-	.	ID=gene302;Name=yagY;Dbxref=GeneID:7148057;gbkey=Gene;gene=yagY;locus_tag=EC55989_0296
NC_011748.1	RefSeq	CDS	323750	324418	.	-	0	ID=cds277;Name=YP_002401421.1;Parent=gene302;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002401421.1,GeneID:7148057;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401421.1;transl_table=11
NC_011748.1	RefSeq	gene	324476	325063	.	-	.	ID=gene303;Name=ecpA;Dbxref=GeneID:7148058;gbkey=Gene;gene=ecpA;locus_tag=EC55989_0297
NC_011748.1	RefSeq	CDS	324476	325063	.	-	0	ID=cds278;Name=YP_002401422.1;Parent=gene303;Note=Evidence 2b : Function of strongly homologous gene%3B PubMedId : 17563352%2C 11466275%3B Product type s : structure;Dbxref=Genbank:YP_002401422.1,GeneID:7148058;gbkey=CDS;product=common pilus ECP;protein_id=YP_002401422.1;transl_table=11
NC_011748.1	RefSeq	gene	325138	325728	.	-	.	ID=gene304;Name=ykgK;Dbxref=GeneID:7145974;gbkey=Gene;gene=ykgK;locus_tag=EC55989_0298
NC_011748.1	RefSeq	CDS	325138	325728	.	-	0	ID=cds279;Name=YP_002401423.1;Parent=gene304;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pr :  regulator;Dbxref=Genbank:YP_002401423.1,GeneID:7145974;gbkey=CDS;product=transcriptional regulator;protein_id=YP_002401423.1;transl_table=11
NC_011748.1	RefSeq	gene	326503	326730	.	+	.	ID=gene305;Name=ykgL;Dbxref=GeneID:7149243;gbkey=Gene;gene=ykgL;locus_tag=EC55989_0299
NC_011748.1	RefSeq	CDS	326503	326730	.	+	0	ID=cds280;Name=YP_002401424.1;Parent=gene305;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002401424.1,GeneID:7149243;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401424.1;transl_table=11
NC_011748.1	RefSeq	gene	326905	327168	.	-	.	ID=gene306;Name=rpmE2;Dbxref=GeneID:7149244;gbkey=Gene;gene=rpmE2;locus_tag=EC55989_0300
NC_011748.1	RefSeq	CDS	326905	327168	.	-	0	ID=cds281;Name=YP_002401425.1;Parent=gene306;Note=RpmE2%3B there appears to be two types of ribosomal proteins L31 in bacterial genomes%3B some contain a CxxC motif while others do not%3B Bacillus subtilis has both types%3B the proteins in this cluster do not have the CXXC motif%3B RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth%3B expression of ytiA is controlled by a zinc-specific transcriptional repressor%3B RpmE contains one zinc ion and a CxxC motif is responsible for this binding%3B forms an RNP particle along with proteins L5%2C L18%2C and L25 and 5S rRNA%3B found crosslinked to L2 and L25 and EF-G%3B may be near the peptidyltransferase site of the 50S ribosome;Dbxref=Genbank:YP_002401425.1,GeneID:7149244;gbkey=CDS;product=50S ribosomal protein L31;protein_id=YP_002401425.1;transl_table=11
NC_011748.1	RefSeq	gene	328749	333002	.	+	.	ID=gene307;Name=EC55989_0302;Dbxref=GeneID:7149245;gbkey=Gene;locus_tag=EC55989_0302
NC_011748.1	RefSeq	CDS	328749	333002	.	+	0	ID=cds282;Name=YP_002401426.1;Parent=gene307;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pf :  factor;Dbxref=Genbank:YP_002401426.1,GeneID:7149245;gbkey=CDS;product=adhesin;protein_id=YP_002401426.1;transl_table=11
NC_011748.1	RefSeq	gene	333123	334013	.	-	.	ID=gene308;Name=ykgA;Dbxref=GeneID:7144408;gbkey=Gene;gene=ykgA;locus_tag=EC55989_0303
NC_011748.1	RefSeq	CDS	333123	334013	.	-	0	ID=cds283;Name=YP_002401427.1;Parent=gene308;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pr :  regulator;Dbxref=Genbank:YP_002401427.1,GeneID:7144408;gbkey=CDS;product=Putatve transcriptional regulator ykgA;protein_id=YP_002401427.1;transl_table=11
NC_011748.1	RefSeq	gene	334570	335163	.	-	.	ID=gene309;Name=ykgB;Dbxref=GeneID:7149234;gbkey=Gene;gene=ykgB;locus_tag=EC55989_0304
NC_011748.1	RefSeq	CDS	334570	335163	.	-	0	ID=cds284;Name=YP_002401428.1;Parent=gene309;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002401428.1,GeneID:7149234;gbkey=CDS;product=inner membrane protein;protein_id=YP_002401428.1;transl_table=11
NC_011748.1	RefSeq	gene	335175	335411	.	-	.	ID=gene310;Name=ykgI;Dbxref=GeneID:7149235;gbkey=Gene;gene=ykgI;locus_tag=EC55989_0305
NC_011748.1	RefSeq	CDS	335175	335411	.	-	0	ID=cds285;Name=YP_002401429.1;Parent=gene310;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002401429.1,GeneID:7149235;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401429.1;transl_table=11
NC_011748.1	RefSeq	gene	335520	336845	.	-	.	ID=gene311;Name=ykgC;Dbxref=GeneID:7149242;gbkey=Gene;gene=ykgC;locus_tag=EC55989_0306
NC_011748.1	RefSeq	CDS	335520	336845	.	-	0	ID=cds286;Name=YP_002401430.1;Parent=gene311;Note=Involved in disulfide oxidoreductase activity and electron transport;Dbxref=Genbank:YP_002401430.1,GeneID:7149242;gbkey=CDS;product=pyridine nucleotide-disulfide oxidoreductase;protein_id=YP_002401430.1;transl_table=11
NC_011748.1	RefSeq	gene	337071	337925	.	+	.	ID=gene312;Name=ykgD;Dbxref=GeneID:7149236;gbkey=Gene;gene=ykgD;locus_tag=EC55989_0307
NC_011748.1	RefSeq	CDS	337071	337925	.	+	0	ID=cds287;Name=YP_002401431.1;Parent=gene312;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pr :  regulator;Dbxref=Genbank:YP_002401431.1,GeneID:7149236;gbkey=CDS;product=AraC-type DNA-binding transcriptional regulator;protein_id=YP_002401431.1;transl_table=11
NC_011748.1	RefSeq	gene	338452	339171	.	+	.	ID=gene313;Name=ykgE;Dbxref=GeneID:7149237;gbkey=Gene;gene=ykgE;locus_tag=EC55989_0308
NC_011748.1	RefSeq	CDS	338452	339171	.	+	0	ID=cds288;Name=YP_002401432.1;Parent=gene313;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002401432.1,GeneID:7149237;gbkey=CDS;product=hydroxyacid oxidoreductase %28Fe-S centre%29;protein_id=YP_002401432.1;transl_table=11
NC_011748.1	RefSeq	gene	339182	340609	.	+	.	ID=gene314;Name=ykgF;Dbxref=GeneID:7149238;gbkey=Gene;gene=ykgF;locus_tag=EC55989_0309
NC_011748.1	RefSeq	CDS	339182	340609	.	+	0	ID=cds289;Name=YP_002401433.1;Parent=gene314;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002401433.1,GeneID:7149238;gbkey=CDS;product=oxidoreductase subunit with NAD%28P%29-binding domain and ferridoxin-like domain;protein_id=YP_002401433.1;transl_table=11
NC_011748.1	RefSeq	gene	340602	341297	.	+	.	ID=gene315;Name=ykgG;Dbxref=GeneID:7149239;gbkey=Gene;gene=ykgG;locus_tag=EC55989_0310
NC_011748.1	RefSeq	CDS	340602	341297	.	+	0	ID=cds290;Name=YP_002401434.1;Parent=gene315;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002401434.1,GeneID:7149239;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401434.1;transl_table=11
NC_011748.1	RefSeq	gene	341371	341568	.	-	.	ID=gene316;Name=EC55989_0311;Dbxref=GeneID:7149240;gbkey=Gene;locus_tag=EC55989_0311
NC_011748.1	RefSeq	CDS	341371	341568	.	-	0	ID=cds291;Name=YP_002401435.1;Parent=gene316;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002401435.1,GeneID:7149240;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401435.1;transl_table=11
NC_011748.1	RefSeq	gene	341543	342208	.	-	.	ID=gene317;Name=ykgH;Dbxref=GeneID:7144409;gbkey=Gene;gene=ykgH;locus_tag=EC55989_0312
NC_011748.1	RefSeq	CDS	341543	342208	.	-	0	ID=cds292;Name=YP_002401436.1;Parent=gene317;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002401436.1,GeneID:7144409;gbkey=CDS;product=inner membrane protein;protein_id=YP_002401436.1;transl_table=11
NC_011748.1	RefSeq	gene	342421	344091	.	-	.	ID=gene318;Name=betA;Dbxref=GeneID:7149241;gbkey=Gene;gene=betA;locus_tag=EC55989_0313
NC_011748.1	RefSeq	CDS	342421	344091	.	-	0	ID=cds293;Name=YP_002401437.1;Parent=gene318;Note=catalyzes the oxidation of choline to betaine aldehyde and betain aldehyde to glycine betaine;Dbxref=Genbank:YP_002401437.1,GeneID:7149241;gbkey=CDS;product=choline dehydrogenase;protein_id=YP_002401437.1;transl_table=11
NC_011748.1	RefSeq	gene	344105	345577	.	-	.	ID=gene319;Name=betB;Dbxref=GeneID:7145610;gbkey=Gene;gene=betB;locus_tag=EC55989_0314
NC_011748.1	RefSeq	CDS	344105	345577	.	-	0	ID=cds294;Name=YP_002401438.1;Parent=gene319;Note=catalyzes the formation of betaine from betaine aldehyde;Dbxref=Genbank:YP_002401438.1,GeneID:7145610;gbkey=CDS;product=betaine aldehyde dehydrogenase;protein_id=YP_002401438.1;transl_table=11
NC_011748.1	RefSeq	gene	345591	346178	.	-	.	ID=gene320;Name=betI;Dbxref=GeneID:7145611;gbkey=Gene;gene=betI;locus_tag=EC55989_0315
NC_011748.1	RefSeq	CDS	345591	346178	.	-	0	ID=cds295;Name=YP_002401439.1;Parent=gene320;Note=HTH-type%3B bet1%3B Repressor involved in choline regulation of the bet genes;Dbxref=Genbank:YP_002401439.1,GeneID:7145611;gbkey=CDS;product=transcriptional regulator BetI;protein_id=YP_002401439.1;transl_table=11
NC_011748.1	RefSeq	gene	346307	348340	.	+	.	ID=gene321;Name=betT;Dbxref=GeneID:7145612;gbkey=Gene;gene=betT;locus_tag=EC55989_0316
NC_011748.1	RefSeq	CDS	346307	348340	.	+	0	ID=cds296;Name=YP_002401440.1;Parent=gene321;Note=proton-motive-force-driven choline transporter;Dbxref=Genbank:YP_002401440.1,GeneID:7145612;gbkey=CDS;product=choline transport protein BetT;protein_id=YP_002401440.1;transl_table=11
NC_011748.1	RefSeq	gene	348847	352896	.	+	.	ID=gene322;Name=EC55989_0317;Dbxref=GeneID:7145613;gbkey=Gene;locus_tag=EC55989_0317
NC_011748.1	RefSeq	CDS	348847	352896	.	+	0	ID=cds297;Name=YP_002401441.1;Parent=gene322;Note=Evidence 2b : Function of strongly homologous gene%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002401441.1,GeneID:7145613;gbkey=CDS;product=AidA-I adhesin-like protein;protein_id=YP_002401441.1;transl_table=11
NC_011748.1	RefSeq	gene	353038	354126	.	+	.	ID=gene323;Name=yahA;Dbxref=GeneID:7144410;gbkey=Gene;gene=yahA;locus_tag=EC55989_0318
NC_011748.1	RefSeq	CDS	353038	354126	.	+	0	ID=cds298;Name=YP_002401442.1;Parent=gene323;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 15995192%3B Product type e : enzyme;Dbxref=Genbank:YP_002401442.1,GeneID:7144410;gbkey=CDS;product=cyclic di-GMP phosphodiesterase;protein_id=YP_002401442.1;transl_table=11
NC_011748.1	RefSeq	gene	354168	355100	.	-	.	ID=gene324;Name=yahB;Dbxref=GeneID:7148059;gbkey=Gene;gene=yahB;locus_tag=EC55989_0319
NC_011748.1	RefSeq	CDS	354168	355100	.	-	0	ID=cds299;Name=YP_002401443.1;Parent=gene324;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pr :  regulator;Dbxref=Genbank:YP_002401443.1,GeneID:7148059;gbkey=CDS;product=DNA-binding transcriptional regulator;protein_id=YP_002401443.1;transl_table=11
NC_011748.1	RefSeq	gene	355192	355689	.	-	.	ID=gene325;Name=yahC;Dbxref=GeneID:7148060;gbkey=Gene;gene=yahC;locus_tag=EC55989_0320
NC_011748.1	RefSeq	CDS	355192	355689	.	-	0	ID=cds300;Name=YP_002401444.1;Parent=gene325;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002401444.1,GeneID:7148060;gbkey=CDS;product=inner membrane protein;protein_id=YP_002401444.1;transl_table=11
NC_011748.1	RefSeq	gene	355947	356552	.	+	.	ID=gene326;Name=yahD;Dbxref=GeneID:7148061;gbkey=Gene;gene=yahD;locus_tag=EC55989_0321
NC_011748.1	RefSeq	CDS	355947	356552	.	+	0	ID=cds301;Name=YP_002401445.1;Parent=gene326;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002401445.1,GeneID:7148061;gbkey=CDS;product=protein with ankyrin domain;protein_id=YP_002401445.1;transl_table=11
NC_011748.1	RefSeq	gene	356592	357455	.	+	.	ID=gene327;Name=yahE;Dbxref=GeneID:7148062;gbkey=Gene;gene=yahE;locus_tag=EC55989_0322
NC_011748.1	RefSeq	CDS	356592	357455	.	+	0	ID=cds302;Name=YP_002401446.1;Parent=gene327;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002401446.1,GeneID:7148062;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401446.1;transl_table=11
NC_011748.1	RefSeq	gene	357445	358992	.	+	.	ID=gene328;Name=yahF;Dbxref=GeneID:7148063;gbkey=Gene;gene=yahF;locus_tag=EC55989_0323
NC_011748.1	RefSeq	CDS	357445	358992	.	+	0	ID=cds303;Name=YP_002401447.1;Parent=gene328;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002401447.1,GeneID:7148063;gbkey=CDS;product=enzyme with acyl-CoA domain;protein_id=YP_002401447.1;transl_table=11
NC_011748.1	RefSeq	gene	358992	360410	.	+	.	ID=gene329;Name=yahG;Dbxref=GeneID:7148064;gbkey=Gene;gene=yahG;locus_tag=EC55989_0324
NC_011748.1	RefSeq	CDS	358992	360410	.	+	0	ID=cds304;Name=YP_002401448.1;Parent=gene329;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002401448.1,GeneID:7148064;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401448.1;transl_table=11
NC_011748.1	RefSeq	gene	360553	361503	.	+	.	ID=gene330;Name=yahI;Dbxref=GeneID:7148065;gbkey=Gene;gene=yahI;locus_tag=EC55989_0325
NC_011748.1	RefSeq	CDS	360553	361503	.	+	0	ID=cds305;Name=YP_002401449.1;Parent=gene330;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 7711027%2C 11523892%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002401449.1,GeneID:7148065;gbkey=CDS;product=carbamate kinase;protein_id=YP_002401449.1;transl_table=11
NC_011748.1	RefSeq	gene	361513	362895	.	+	.	ID=gene331;Name=yahJ;Dbxref=GeneID:7148066;gbkey=Gene;gene=yahJ;locus_tag=EC55989_0326
NC_011748.1	RefSeq	CDS	361513	362895	.	+	0	ID=cds306;Name=YP_002401450.1;Parent=gene331;Note=metallo-dependent hydrolase superfamily%3B deaminase with metallo-dependent hydrolase domain;Dbxref=Genbank:YP_002401450.1,GeneID:7148066;gbkey=CDS;product=deaminase;protein_id=YP_002401450.1;transl_table=11
NC_011748.1	RefSeq	gene	363164	363604	.	+	.	ID=gene332;Name=EC55989_0327;Dbxref=GeneID:7148067;gbkey=Gene;locus_tag=EC55989_0327
NC_011748.1	RefSeq	CDS	363164	363604	.	+	0	ID=cds307;Name=YP_002401451.1;Parent=gene332;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002401451.1,GeneID:7148067;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401451.1;transl_table=11
NC_011748.1	RefSeq	gene	363855	364841	.	+	.	ID=gene333;Name=EC55989_0328;Dbxref=GeneID:7144411;gbkey=Gene;locus_tag=EC55989_0328
NC_011748.1	RefSeq	CDS	363855	364841	.	+	0	ID=cds308;Name=YP_002401452.1;Parent=gene333;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002401452.1,GeneID:7144411;gbkey=CDS;product=periplasmic binding protein%2C substrate ribose %28sugar-binding protein%29%2C ABC-type transport system;protein_id=YP_002401452.1;transl_table=11
NC_011748.1	RefSeq	gene	364875	366374	.	+	.	ID=gene334;Name=EC55989_0329;Dbxref=GeneID:7144412;gbkey=Gene;locus_tag=EC55989_0329
NC_011748.1	RefSeq	CDS	364875	366374	.	+	0	ID=cds309;Name=YP_002401453.1;Parent=gene334;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002401453.1,GeneID:7144412;gbkey=CDS;product=ATP-binding component of ABC sugar transport system;protein_id=YP_002401453.1;transl_table=11
NC_011748.1	RefSeq	gene	366367	367338	.	+	.	ID=gene335;Name=EC55989_0330;Dbxref=GeneID:7144413;gbkey=Gene;locus_tag=EC55989_0330
NC_011748.1	RefSeq	CDS	366367	367338	.	+	0	ID=cds310;Name=YP_002401454.1;Parent=gene335;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002401454.1,GeneID:7144413;gbkey=CDS;product=permease component of sugar ABC transport system;protein_id=YP_002401454.1;transl_table=11
NC_011748.1	RefSeq	gene	367305	368291	.	+	.	ID=gene336;Name=EC55989_0331;Dbxref=GeneID:7144414;gbkey=Gene;locus_tag=EC55989_0331
NC_011748.1	RefSeq	CDS	367305	368291	.	+	0	ID=cds311;Name=YP_002401455.1;Parent=gene336;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002401455.1,GeneID:7144414;gbkey=CDS;product=permease component of sugar ABC transport system;protein_id=YP_002401455.1;transl_table=11
NC_011748.1	RefSeq	gene	368378	369427	.	+	.	ID=gene337;Name=yahK;Dbxref=GeneID:7144415;gbkey=Gene;gene=yahK;locus_tag=EC55989_0332
NC_011748.1	RefSeq	CDS	368378	369427	.	+	0	ID=cds312;Name=YP_002401456.1;Parent=gene337;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002401456.1,GeneID:7144415;gbkey=CDS;product=oxidoreductase%2C Zn-dependent and NAD%28P%29-binding;protein_id=YP_002401456.1;transl_table=11
NC_011748.1	RefSeq	gene	369670	370485	.	+	.	ID=gene338;Name=yahL;Dbxref=GeneID:7148068;gbkey=Gene;gene=yahL;locus_tag=EC55989_0333
NC_011748.1	RefSeq	CDS	369670	370485	.	+	0	ID=cds313;Name=YP_002401457.1;Parent=gene338;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002401457.1,GeneID:7148068;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401457.1;transl_table=11
NC_011748.1	RefSeq	gene	370827	370907	.	+	.	ID=gene339;Name=EC55989_tRNA6;Dbxref=GeneID:7148069;gbkey=Gene;locus_tag=EC55989_tRNA6
NC_011748.1	RefSeq	tRNA	370827	370907	.	+	.	ID=rna18;Note=Pseudo tRNA;Dbxref=GeneID:7148069;gbkey=tRNA;product=tRNA-OTHER
NC_011748.1	RefSeq	exon	370827	370907	.	+	.	ID=id27;Parent=rna18;Note=Pseudo tRNA;Dbxref=GeneID:7148069;gbkey=tRNA;product=tRNA-OTHER
NC_011748.1	RefSeq	gene	370897	371142	.	+	.	ID=gene340;Name=yahM;Dbxref=GeneID:7145372;gbkey=Gene;gene=yahM;locus_tag=EC55989_0334
NC_011748.1	RefSeq	CDS	370897	371142	.	+	0	ID=cds314;Name=YP_002401458.1;Parent=gene340;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002401458.1,GeneID:7145372;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401458.1;transl_table=11
NC_011748.1	RefSeq	gene	371159	371830	.	-	.	ID=gene341;Name=yahN;Dbxref=GeneID:7148070;gbkey=Gene;gene=yahN;locus_tag=EC55989_0335
NC_011748.1	RefSeq	CDS	371159	371830	.	-	0	ID=cds315;Name=YP_002401459.1;Parent=gene341;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 12879215%3B Product type t : transporter;Dbxref=Genbank:YP_002401459.1,GeneID:7148070;gbkey=CDS;product=neutral amino-acid efflux system;protein_id=YP_002401459.1;transl_table=11
NC_011748.1	RefSeq	STS	371948	372582	.	+	.	ID=id28;Dbxref=UniSTS:148387;gbkey=STS
NC_011748.1	RefSeq	gene	371977	372252	.	+	.	ID=gene342;Name=yahO;Dbxref=GeneID:7148071;gbkey=Gene;gene=yahO;locus_tag=EC55989_0336
NC_011748.1	RefSeq	CDS	371977	372252	.	+	0	ID=cds316;Name=YP_002401460.1;Parent=gene342;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002401460.1,GeneID:7148071;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401460.1;transl_table=11
NC_011748.1	RefSeq	gene	372353	373939	.	-	.	ID=gene343;Name=prpR;Dbxref=GeneID:7148072;gbkey=Gene;gene=prpR;locus_tag=EC55989_0337
NC_011748.1	RefSeq	CDS	372353	373939	.	-	0	ID=cds317;Name=YP_002401461.1;Parent=gene343;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 9325432%2C 15805526%3B Product type r : regulator;Dbxref=Genbank:YP_002401461.1,GeneID:7148072;gbkey=CDS;product=DNA-binding transcriptional activator;protein_id=YP_002401461.1;transl_table=11
NC_011748.1	RefSeq	gene	374177	375067	.	+	.	ID=gene344;Name=prpB;Dbxref=GeneID:7147266;gbkey=Gene;gene=prpB;locus_tag=EC55989_0338
NC_011748.1	RefSeq	CDS	374177	375067	.	+	0	ID=cds318;Name=YP_002401462.1;Parent=gene344;Note=catalyzes the formation of pyruvate and succinate from 2-methylisocitrate;Dbxref=Genbank:YP_002401462.1,GeneID:7147266;gbkey=CDS;product=2-methylisocitrate lyase;protein_id=YP_002401462.1;transl_table=11
NC_011748.1	RefSeq	gene	375112	376281	.	+	.	ID=gene345;Name=prpC;Dbxref=GeneID:7147262;gbkey=Gene;gene=prpC;locus_tag=EC55989_0339
NC_011748.1	RefSeq	CDS	375112	376281	.	+	0	ID=cds319;Name=YP_002401463.1;Parent=gene345;Note=catalyzes the synthesis of 2-methylcitrate from propionyl-CoA and oxaloacetate%3B also catalyzes the condensation of oxaloacetate with acetyl-CoA but with a lower specificity;Dbxref=Genbank:YP_002401463.1,GeneID:7147262;gbkey=CDS;product=methylcitrate synthase;protein_id=YP_002401463.1;transl_table=11
NC_011748.1	RefSeq	gene	376315	377766	.	+	.	ID=gene346;Name=prpD;Dbxref=GeneID:7147263;gbkey=Gene;gene=prpD;locus_tag=EC55989_0340
NC_011748.1	RefSeq	CDS	376315	377766	.	+	0	ID=cds320;Name=YP_002401464.1;Parent=gene346;Note=functions in propionate metabolism%3B involved in isomerization of %282S%2C3S%29-methylcitrate to %282R%2C3S%29-methylisocitrate%3B also encodes minor aconitase or dehydratase activity%3B aconitase C;Dbxref=Genbank:YP_002401464.1,GeneID:7147263;gbkey=CDS;product=2-methylcitrate dehydratase;protein_id=YP_002401464.1;transl_table=11
NC_011748.1	RefSeq	gene	377806	379692	.	+	.	ID=gene347;Name=prpE;Dbxref=GeneID:7147264;gbkey=Gene;gene=prpE;locus_tag=EC55989_0341
NC_011748.1	RefSeq	CDS	377806	379692	.	+	0	ID=cds321;Name=YP_002401465.1;Parent=gene347;Note=catalyzes the formation of propionyl-CoA using propionate as a substrate%3B PrpE from Ralstonia solanacearum can produce acetyl-%2C propionyl-%2C butyryl- and acrylyl-coenzyme A%2C and Salmonella enterica produces propionyl- and butyryl-coenzyme A%3B not expressed in Escherichia coli when grown on propionate%2Fminimal media%3B ATP-dependent;Dbxref=Genbank:YP_002401465.1,GeneID:7147264;gbkey=CDS;product=propionyl-CoA synthetase;protein_id=YP_002401465.1;transl_table=11
NC_011748.1	RefSeq	gene	380155	381135	.	+	.	ID=gene348;Name=EC55989_0342;Dbxref=GeneID:7147265;gbkey=Gene;locus_tag=EC55989_0342
NC_011748.1	RefSeq	CDS	380155	381135	.	+	0	ID=cds322;Name=YP_002401466.1;Parent=gene348;Note=Evidence 2b : Function of strongly homologous gene%3B Product type e : enzyme;Dbxref=Genbank:YP_002401466.1,GeneID:7147265;gbkey=CDS;product=transposase%2C IS110 family;protein_id=YP_002401466.1;transl_table=11
NC_011748.1	RefSeq	gene	381397	382656	.	+	.	ID=gene349;Name=codB;Dbxref=GeneID:7144416;gbkey=Gene;gene=codB;locus_tag=EC55989_0343
NC_011748.1	RefSeq	CDS	381397	382656	.	+	0	ID=cds323;Name=YP_002401467.1;Parent=gene349;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 92349961%3B Product type t : transporter;Dbxref=Genbank:YP_002401467.1,GeneID:7144416;gbkey=CDS;product=cytosine permease;protein_id=YP_002401467.1;transl_table=11
NC_011748.1	RefSeq	gene	382646	383929	.	+	.	ID=gene350;Name=codA;Dbxref=GeneID:7145740;gbkey=Gene;gene=codA;locus_tag=EC55989_0344
NC_011748.1	RefSeq	CDS	382646	383929	.	+	0	ID=cds324;Name=YP_002401468.1;Parent=gene350;Note=Catalyzes the deamination of cytosine to uracil and ammonia;Dbxref=Genbank:YP_002401468.1,GeneID:7145740;gbkey=CDS;product=cytosine deaminase;protein_id=YP_002401468.1;transl_table=11
NC_011748.1	RefSeq	gene	383969	384868	.	-	.	ID=gene351;Name=cynR;Dbxref=GeneID:7145739;gbkey=Gene;gene=cynR;locus_tag=EC55989_0345
NC_011748.1	RefSeq	CDS	383969	384868	.	-	0	ID=cds325;Name=YP_002401469.1;Parent=gene351;Note=controls the expression of the cynTSX operon involved in degrading and using cyanate as a sole nitrogen source;Dbxref=Genbank:YP_002401469.1,GeneID:7145739;gbkey=CDS;product=DNA-binding transcriptional regulator CynR;protein_id=YP_002401469.1;transl_table=11
NC_011748.1	RefSeq	gene	384978	385637	.	+	.	ID=gene352;Name=cynT;Dbxref=GeneID:7145811;gbkey=Gene;gene=cynT;locus_tag=EC55989_0346
NC_011748.1	RefSeq	CDS	384978	385637	.	+	0	ID=cds326;Name=YP_002401470.1;Parent=gene352;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 91242169%2C 92156106%2C 94075239%2C 3049588%3B Product type e : enzyme;Dbxref=Genbank:YP_002401470.1,GeneID:7145811;gbkey=CDS;product=carbonic anhydrase;protein_id=YP_002401470.1;transl_table=11
NC_011748.1	RefSeq	gene	385668	386138	.	+	.	ID=gene353;Name=cynS;Dbxref=GeneID:7145813;gbkey=Gene;gene=cynS;locus_tag=EC55989_0347
NC_011748.1	RefSeq	CDS	385668	386138	.	+	0	ID=cds327;Name=YP_002401471.1;Parent=gene353;Note=catalyzes the reaction of cyanate and bicarbonate to produce ammonia and carbon dioxide;Dbxref=Genbank:YP_002401471.1,GeneID:7145813;gbkey=CDS;product=cyanate hydratase;protein_id=YP_002401471.1;transl_table=11
NC_011748.1	RefSeq	gene	386171	387325	.	+	.	ID=gene354;Name=cynX;Dbxref=GeneID:7145812;gbkey=Gene;gene=cynX;locus_tag=EC55989_0348
NC_011748.1	RefSeq	CDS	386171	387325	.	+	0	ID=cds328;Name=YP_002401472.1;Parent=gene354;Note=MFS transporter family member induced in the presence of cyanate as part of a 3 gene operon%3B not essential;Dbxref=Genbank:YP_002401472.1,GeneID:7145812;gbkey=CDS;product=cyanate transporter;protein_id=YP_002401472.1;transl_table=11
NC_011748.1	RefSeq	gene	387428	388039	.	-	.	ID=gene355;Name=lacA;Dbxref=GeneID:7145814;gbkey=Gene;gene=lacA;locus_tag=EC55989_0349
NC_011748.1	RefSeq	CDS	387428	388039	.	-	0	ID=cds329;Name=YP_002401473.1;Parent=gene355;Note=transfers acetyl group from acetyl-CoA to the 6-hydroxyl of galactopyranosides%3B exact physiological role is unknown;Dbxref=Genbank:YP_002401473.1,GeneID:7145814;gbkey=CDS;product=galactoside O-acetyltransferase;protein_id=YP_002401473.1;transl_table=11
NC_011748.1	RefSeq	gene	388105	389358	.	-	.	ID=gene356;Name=lacY;Dbxref=GeneID:7146675;gbkey=Gene;gene=lacY;locus_tag=EC55989_0350
NC_011748.1	RefSeq	CDS	388105	389358	.	-	0	ID=cds330;Name=YP_002401474.1;Parent=gene356;Note=lactose%2Fproton symporter%3B mediates lactose%2Fproton symport through the membrane by utilizing the proton gradient to drive transport of galactosides%3B member of major facilitator superfamily%3B functions as a monomer with 12 transmembrane segments;Dbxref=Genbank:YP_002401474.1,GeneID:7146675;gbkey=CDS;product=galactoside permease;protein_id=YP_002401474.1;transl_table=11
NC_011748.1	RefSeq	gene	389410	392484	.	-	.	ID=gene357;Name=lacZ;Dbxref=GeneID:7146677;gbkey=Gene;gene=lacZ;locus_tag=EC55989_0351
NC_011748.1	RefSeq	CDS	389410	392484	.	-	0	ID=cds331;Name=YP_002401475.1;Parent=gene357;Note=forms a homotetramer%3B hydrolyzes lactose disaccharide to galactose and glucose%3B converts lactose to allolactose which is the natural inducer of the lac operon;Dbxref=Genbank:YP_002401475.1,GeneID:7146677;gbkey=CDS;product=beta-D-galactosidase;protein_id=YP_002401475.1;transl_table=11
NC_011748.1	RefSeq	STS	392473	392605	.	+	.	ID=id29;Dbxref=UniSTS:273614;gbkey=STS
NC_011748.1	RefSeq	STS	392474	392585	.	+	.	ID=id30;Dbxref=UniSTS:18383;gbkey=STS
NC_011748.1	RefSeq	gene	392607	393689	.	-	.	ID=gene358;Name=lacI;Dbxref=GeneID:7146678;gbkey=Gene;gene=lacI;locus_tag=EC55989_0352
NC_011748.1	RefSeq	CDS	392607	393689	.	-	0	ID=cds332;Name=YP_002401476.1;Parent=gene358;Note=transcriptional repressor of lac operon%3B forms a homotetramer as a dimer of dimers%3B binds specific sites in lac operon resulting in DNA looping between the operators%3B binds allolactose as inducer;Dbxref=Genbank:YP_002401476.1,GeneID:7146678;gbkey=CDS;product=lac repressor;protein_id=YP_002401476.1;transl_table=11
NC_011748.1	RefSeq	gene	393766	394713	.	-	.	ID=gene359;Name=mhpR;Dbxref=GeneID:7146676;gbkey=Gene;gene=mhpR;locus_tag=EC55989_0353
NC_011748.1	RefSeq	CDS	393766	394713	.	-	0	ID=cds333;Name=YP_002401477.1;Parent=gene359;Note=activator of 3-phenylpropionic acid catabolism;Dbxref=Genbank:YP_002401477.1,GeneID:7146676;gbkey=CDS;product=DNA-binding transcriptional activator MhpR;protein_id=YP_002401477.1;transl_table=11
NC_011748.1	RefSeq	gene	394790	396454	.	+	.	ID=gene360;Name=mhpA;Dbxref=GeneID:7146850;gbkey=Gene;gene=mhpA;locus_tag=EC55989_0354
NC_011748.1	RefSeq	CDS	394790	396454	.	+	0	ID=cds334;Name=YP_002401478.1;Parent=gene360;Note=catalyzes the formation of 3-%282%2C3-dihydroxyphenyl%29propionate from 3-%283-hydroxyphenyl%29propionate;Dbxref=Genbank:YP_002401478.1,GeneID:7146850;gbkey=CDS;product=3-%283-hydroxyphenyl%29propionate hydroxylase;protein_id=YP_002401478.1;transl_table=11
NC_011748.1	RefSeq	gene	396456	397400	.	+	.	ID=gene361;Name=mhpB;Dbxref=GeneID:7146844;gbkey=Gene;gene=mhpB;locus_tag=EC55989_0355
NC_011748.1	RefSeq	CDS	396456	397400	.	+	0	ID=cds335;Name=YP_002401479.1;Parent=gene361;Note=catalyzes the cleavage of 3-%282%2C3-dihydroxyphenyl%29 propionate into 2-hydroxy-6-oxonona-2%2C4-diene-1%2C9-dioate%3B part of the 3-phenylpropionic acid degradation pathway%3B member of the protocatechuate 4%2C5-dioxygenase family;Dbxref=Genbank:YP_002401479.1,GeneID:7146844;gbkey=CDS;product=3-%282%2C3-dihydroxyphenyl%29propionate dioxygenase;protein_id=YP_002401479.1;transl_table=11
NC_011748.1	RefSeq	gene	397403	398284	.	+	.	ID=gene362;Name=mhpC;Dbxref=GeneID:7146845;gbkey=Gene;gene=mhpC;locus_tag=EC55989_0356
NC_011748.1	RefSeq	CDS	397403	398284	.	+	0	ID=cds336;Name=YP_002401480.1;Parent=gene362;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 87008429%2C 94002258%2C 15663942%3B Product type e : enzyme;Dbxref=Genbank:YP_002401480.1,GeneID:7146845;gbkey=CDS;product=2-hydroxy-6-ketonona-2%2C4-dienedioic acid hydrolase;protein_id=YP_002401480.1;transl_table=11
NC_011748.1	RefSeq	gene	398294	399103	.	+	.	ID=gene363;Name=mhpD;Dbxref=GeneID:7146846;gbkey=Gene;gene=mhpD;locus_tag=EC55989_0357
NC_011748.1	RefSeq	CDS	398294	399103	.	+	0	ID=cds337;Name=YP_002401481.1;Parent=gene363;Note=catalyzes the formation of 2-keto-4-hydroxypentanoic acid from 2-hydroxypentadienoic acid;Dbxref=Genbank:YP_002401481.1,GeneID:7146846;gbkey=CDS;product=2-keto-4-pentenoate hydratase;protein_id=YP_002401481.1;transl_table=11
NC_011748.1	RefSeq	gene	399100	400050	.	+	.	ID=gene364;Name=mhpF;Dbxref=GeneID:7146847;gbkey=Gene;gene=mhpF;locus_tag=EC55989_0358
NC_011748.1	RefSeq	CDS	399100	400050	.	+	0	ID=cds338;Name=YP_002401482.1;Parent=gene364;Note=catalyzes the formation of acetyl-CoA from acetalaldehyde;Dbxref=Genbank:YP_002401482.1,GeneID:7146847;gbkey=CDS;product=acetaldehyde dehydrogenase;protein_id=YP_002401482.1;transl_table=11
NC_011748.1	RefSeq	gene	400047	401060	.	+	.	ID=gene365;Name=mhpE;Dbxref=GeneID:7146849;gbkey=Gene;gene=mhpE;locus_tag=EC55989_0359
NC_011748.1	RefSeq	CDS	400047	401060	.	+	0	ID=cds339;Name=YP_002401483.1;Parent=gene365;Note=catalyzes the formation of pyruvate and acetaldehyde from 4-hydroxy-2-ketovaleric acid%3B involved in the degradation of phenylpropionate;Dbxref=Genbank:YP_002401483.1,GeneID:7146849;gbkey=CDS;product=4-hydroxy-2-ketovalerate aldolase;protein_id=YP_002401483.1;transl_table=11
NC_011748.1	RefSeq	gene	401236	402447	.	+	.	ID=gene366;Name=mhpT;Dbxref=GeneID:7146848;gbkey=Gene;gene=mhpT;locus_tag=EC55989_0360
NC_011748.1	RefSeq	CDS	401236	402447	.	+	0	ID=cds340;Name=YP_002401484.1;Parent=gene366;Note=Evidence 2b : Function of strongly homologous gene%3B PubMedId : 7961399%3B Product type t : transporter;Dbxref=Genbank:YP_002401484.1,GeneID:7146848;gbkey=CDS;product=3-hydroxyphenylpropionic transporter MhpT;protein_id=YP_002401484.1;transl_table=11
NC_011748.1	RefSeq	gene	402549	403088	.	+	.	ID=gene367;Name=yaiL;Dbxref=GeneID:7146851;gbkey=Gene;gene=yaiL;locus_tag=EC55989_0361
NC_011748.1	RefSeq	CDS	402549	403088	.	+	0	ID=cds341;Name=YP_002401485.1;Parent=gene367;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 15115803%2C 12878731%2C 13129938%3B Product type e : enzyme;Dbxref=Genbank:YP_002401485.1,GeneID:7146851;gbkey=CDS;product=nucleoprotein%2Fpolynucleotide-associated enzyme;protein_id=YP_002401485.1;transl_table=11
NC_011748.1	RefSeq	gene	403338	404318	.	+	.	ID=gene368;Name=EC55989_0363;Dbxref=GeneID:7148078;gbkey=Gene;locus_tag=EC55989_0363
NC_011748.1	RefSeq	CDS	403338	404318	.	+	0	ID=cds342;Name=YP_002401486.1;Parent=gene368;Note=Evidence 2b : Function of strongly homologous gene%3B Product type e : enzyme;Dbxref=Genbank:YP_002401486.1,GeneID:7148078;gbkey=CDS;product=transposase%2C IS110 family;protein_id=YP_002401486.1;transl_table=11
NC_011748.1	RefSeq	gene	404593	405426	.	-	.	ID=gene369;Name=frmB;Dbxref=GeneID:7144417;gbkey=Gene;gene=frmB;locus_tag=EC55989_0364
NC_011748.1	RefSeq	CDS	404593	405426	.	-	0	ID=cds343;Name=YP_002401487.1;Parent=gene369;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 16567800%2C 15466022%3B Product type e : enzyme;Dbxref=Genbank:YP_002401487.1,GeneID:7144417;gbkey=CDS;product=S-formylglutathione hydrolase;protein_id=YP_002401487.1;transl_table=11
NC_011748.1	RefSeq	gene	405519	406628	.	-	.	ID=gene370;Name=frmA;Dbxref=GeneID:7146190;gbkey=Gene;gene=frmA;locus_tag=EC55989_0365
NC_011748.1	RefSeq	CDS	405519	406628	.	-	0	ID=cds344;Name=YP_002401488.1;Parent=gene370;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 15466022%2C 87172301%2C 1731906%3B Product type e : enzyme;Dbxref=Genbank:YP_002401488.1,GeneID:7146190;gbkey=CDS;product=alcohol dehydrogenase;protein_id=YP_002401488.1;transl_table=11
NC_011748.1	RefSeq	gene	406663	406938	.	-	.	ID=gene371;Name=frmR;Dbxref=GeneID:7146189;gbkey=Gene;gene=frmR;locus_tag=EC55989_0366
NC_011748.1	RefSeq	CDS	406663	406938	.	-	0	ID=cds345;Name=YP_002401489.1;Parent=gene371;Note=formaldehyde-induced negative regulator of the frmRAB operon;Dbxref=Genbank:YP_002401489.1,GeneID:7146189;gbkey=CDS;product=regulator protein FrmR;protein_id=YP_002401489.1;transl_table=11
NC_011748.1	RefSeq	gene	407124	407897	.	-	.	ID=gene372;Name=yaiO;Dbxref=GeneID:7146192;gbkey=Gene;gene=yaiO;locus_tag=EC55989_0368
NC_011748.1	RefSeq	CDS	407124	407897	.	-	0	ID=cds346;Name=YP_002401490.1;Parent=gene372;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002401490.1,GeneID:7146192;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401490.1;transl_table=11
NC_011748.1	RefSeq	gene	407899	408609	.	-	.	ID=gene373;Name=yaiX;Dbxref=GeneID:7148079;gbkey=Gene;gene=yaiX;locus_tag=EC55989_0369
NC_011748.1	RefSeq	CDS	407899	408609	.	-	0	ID=cds347;Name=YP_002401491.1;Parent=gene373;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002401491.1,GeneID:7148079;gbkey=CDS;product=transferase;protein_id=YP_002401491.1;transl_table=11
NC_011748.1	RefSeq	gene	408458	409654	.	-	.	ID=gene374;Name=yaiP;Dbxref=GeneID:7148084;gbkey=Gene;gene=yaiP;locus_tag=EC55989_0370
NC_011748.1	RefSeq	CDS	408458	409654	.	-	0	ID=cds348;Name=YP_002401492.1;Parent=gene374;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002401492.1,GeneID:7148084;gbkey=CDS;product=membrane-associated glycosyltransferase;protein_id=YP_002401492.1;transl_table=11
NC_011748.1	RefSeq	gene	409664	410335	.	-	.	ID=gene375;Name=yaiS;Dbxref=GeneID:7148080;gbkey=Gene;gene=yaiS;locus_tag=EC55989_0371
NC_011748.1	RefSeq	CDS	409664	410335	.	-	0	ID=cds349;Name=YP_002401493.1;Parent=gene375;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002401493.1,GeneID:7148080;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401493.1;transl_table=11
NC_011748.1	RefSeq	gene	410951	411913	.	+	.	ID=gene376;Name=tauA;Dbxref=GeneID:7148081;gbkey=Gene;gene=tauA;locus_tag=EC55989_0372
NC_011748.1	RefSeq	CDS	410951	411913	.	+	0	ID=cds350;Name=YP_002401494.1;Parent=gene376;Note=with TauB and TauC is responsible for taurine uptake.;Dbxref=Genbank:YP_002401494.1,GeneID:7148081;gbkey=CDS;product=taurine transporter substrate binding subunit;protein_id=YP_002401494.1;transl_table=11
NC_011748.1	RefSeq	gene	411926	412693	.	+	.	ID=gene377;Name=tauB;Dbxref=GeneID:7147758;gbkey=Gene;gene=tauB;locus_tag=EC55989_0373
NC_011748.1	RefSeq	CDS	411926	412693	.	+	0	ID=cds351;Name=YP_002401495.1;Parent=gene377;Note=Part of the ABC transporter complex tauABC involved in taurine import;Dbxref=Genbank:YP_002401495.1,GeneID:7147758;gbkey=CDS;product=taurine transporter ATP-binding subunit;protein_id=YP_002401495.1;transl_table=11
NC_011748.1	RefSeq	gene	412690	413517	.	+	.	ID=gene378;Name=tauC;Dbxref=GeneID:7147759;gbkey=Gene;gene=tauC;locus_tag=EC55989_0374
NC_011748.1	RefSeq	CDS	412690	413517	.	+	0	ID=cds352;Name=YP_002401496.1;Parent=gene378;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 9401024%2C 96404792%3B Product type t : transporter;Dbxref=Genbank:YP_002401496.1,GeneID:7147759;gbkey=CDS;product=taurine transporter subunit;protein_id=YP_002401496.1;transl_table=11
NC_011748.1	RefSeq	gene	413514	414365	.	+	.	ID=gene379;Name=tauD;Dbxref=GeneID:7147760;gbkey=Gene;gene=tauD;locus_tag=EC55989_0375
NC_011748.1	RefSeq	CDS	413514	414365	.	+	0	ID=cds353;Name=YP_002401497.1;Parent=gene379;Note=catalyzes the conversion of taurine %282-aminoethanesulfonate%29 to sulfite and aminoacetaldehyde concurrently with the conversion of alpha-ketoglutarate to succinate and carbon dioxide%3B non-heme iron oxidase%3B allows the use of taurine as an alternative sulfur source%3B forms homodimers;Dbxref=Genbank:YP_002401497.1,GeneID:7147760;gbkey=CDS;product=taurine dioxygenase;protein_id=YP_002401497.1;transl_table=11
NC_011748.1	RefSeq	gene	414471	415445	.	-	.	ID=gene380;Name=hemB;Dbxref=GeneID:7147761;gbkey=Gene;gene=hemB;locus_tag=EC55989_0376
NC_011748.1	RefSeq	CDS	414471	415445	.	-	0	ID=cds354;Name=YP_002401498.1;Parent=gene380;Note=catalyzes the formation of porphobilinogen from 5-aminolevulinate;Dbxref=Genbank:YP_002401498.1,GeneID:7147761;gbkey=CDS;product=delta-aminolevulinic acid dehydratase;protein_id=YP_002401498.1;transl_table=11
NC_011748.1	RefSeq	gene	415969	418857	.	+	.	ID=gene381;Name=EC55989_0378;Dbxref=GeneID:7146408;gbkey=Gene;locus_tag=EC55989_0378
NC_011748.1	RefSeq	CDS	415969	418857	.	+	0	ID=cds355;Name=YP_002401499.1;Parent=gene381;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type ps :  structure;Dbxref=Genbank:YP_002401499.1,GeneID:7146408;gbkey=CDS;product=flagellin structural protein%3B protein;protein_id=YP_002401499.1;transl_table=11
NC_011748.1	RefSeq	gene	418900	419568	.	+	.	ID=gene382;Name=yaiV;Dbxref=GeneID:7144418;gbkey=Gene;gene=yaiV;locus_tag=EC55989_0379
NC_011748.1	RefSeq	CDS	418900	419568	.	+	0	ID=cds356;Name=YP_002401500.1;Parent=gene382;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002401500.1,GeneID:7144418;gbkey=CDS;product=DNA-binding transcriptional regulator;protein_id=YP_002401500.1;transl_table=11
NC_011748.1	RefSeq	gene	419569	420726	.	-	.	ID=gene383;Name=ampH;Dbxref=GeneID:7148082;gbkey=Gene;gene=ampH;locus_tag=EC55989_0380
NC_011748.1	RefSeq	CDS	419569	420726	.	-	0	ID=cds357;Name=YP_002401501.1;Parent=gene383;Note=this protein has no known enzymatic function;Dbxref=Genbank:YP_002401501.1,GeneID:7148082;gbkey=CDS;product=beta-lactam binding protein AmpH;protein_id=YP_002401501.1;transl_table=11
NC_011748.1	RefSeq	gene	420864	421058	.	+	.	ID=gene384;Name=EC55989_0381;Dbxref=GeneID:7145498;gbkey=Gene;locus_tag=EC55989_0381
NC_011748.1	RefSeq	CDS	420864	421058	.	+	0	ID=cds358;Name=YP_002401502.1;Parent=gene384;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002401502.1,GeneID:7145498;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401502.1;transl_table=11
NC_011748.1	RefSeq	gene	421078	422298	.	+	.	ID=gene385;Name=sbmA;Dbxref=GeneID:7144419;gbkey=Gene;gene=sbmA;locus_tag=EC55989_0382
NC_011748.1	RefSeq	CDS	421078	422298	.	+	0	ID=cds359;Name=YP_002401503.1;Parent=gene385;Note=in Escherichia coli SbmA is involved in uptake of microcin J25%3B functions along with FhuA%2C TonB%2C and ExbB%2FD in this capacity%3B in Sinorhizobium meliloti%2C BacA is essential and required for symbiosis%3B defects appear to affect the cell envelope;Dbxref=Genbank:YP_002401503.1,GeneID:7144419;gbkey=CDS;product=transporter;protein_id=YP_002401503.1;transl_table=11
NC_011748.1	RefSeq	gene	422311	423405	.	+	.	ID=gene386;Name=yaiW;Dbxref=GeneID:7147609;gbkey=Gene;gene=yaiW;locus_tag=EC55989_0383
NC_011748.1	RefSeq	CDS	422311	423405	.	+	0	ID=cds360;Name=YP_002401504.1;Parent=gene386;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002401504.1,GeneID:7147609;gbkey=CDS;product=lipoprotein;protein_id=YP_002401504.1;transl_table=11
NC_011748.1	RefSeq	gene	423464	423772	.	-	.	ID=gene387;Name=yaiY;Dbxref=GeneID:7148083;gbkey=Gene;gene=yaiY;locus_tag=EC55989_0384
NC_011748.1	RefSeq	CDS	423464	423772	.	-	0	ID=cds361;Name=YP_002401505.1;Parent=gene387;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002401505.1,GeneID:7148083;gbkey=CDS;product=inner membrane protein;protein_id=YP_002401505.1;transl_table=11
NC_011748.1	RefSeq	gene	423900	424244	.	+	.	ID=gene388;Name=yaiZ;Dbxref=GeneID:7148085;gbkey=Gene;gene=yaiZ;locus_tag=EC55989_0385
NC_011748.1	RefSeq	CDS	423900	424244	.	+	0	ID=cds362;Name=YP_002401506.1;Parent=gene388;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002401506.1,GeneID:7148085;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401506.1;transl_table=11
NC_011748.1	RefSeq	gene	424268	425362	.	-	.	ID=gene389;Name=ddl;Dbxref=GeneID:7148086;gbkey=Gene;gene=ddl;locus_tag=EC55989_0386
NC_011748.1	RefSeq	CDS	424268	425362	.	-	0	ID=cds363;Name=YP_002401507.1;Parent=gene389;Note=D-alanine--D-alanine ligase%3B DdlA%3B DdlB%3B cytoplasmic%3B catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis%3B there are two forms of this enzyme in Escherichia coli;Dbxref=Genbank:YP_002401507.1,GeneID:7148086;gbkey=CDS;product=D-alanyl-alanine synthetase A;protein_id=YP_002401507.1;transl_table=11
NC_011748.1	RefSeq	gene	425440	425643	.	+	.	ID=gene390;Name=EC55989_0387;Dbxref=GeneID:7145867;gbkey=Gene;locus_tag=EC55989_0387
NC_011748.1	RefSeq	CDS	425440	425643	.	+	0	ID=cds364;Name=YP_002401508.1;Parent=gene390;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002401508.1,GeneID:7145867;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401508.1;transl_table=11
NC_011748.1	RefSeq	gene	425825	426085	.	+	.	ID=gene391;Name=yaiB;Dbxref=GeneID:7144420;gbkey=Gene;gene=yaiB;locus_tag=EC55989_0388
NC_011748.1	RefSeq	CDS	425825	426085	.	+	0	ID=cds365;Name=YP_002401509.1;Parent=gene391;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002401509.1,GeneID:7144420;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401509.1;transl_table=11
NC_011748.1	RefSeq	gene	426117	426488	.	+	.	ID=gene392;Name=phoA;Dbxref=GeneID:7148074;gbkey=Gene;gene=phoA;locus_tag=EC55989_0389;pseudo=true
NC_011748.1	RefSeq	region	426117	426488	.	+	.	ID=id31;Note=fragment of bacterial alkaline phosphatase %28part 1%29%3BEvidence 7 : Gene remnant%3B Product type e : enzyme;Dbxref=GeneID:7148074;gbkey=misc_feature
NC_011748.1	RefSeq	gene	426499	427002	.	-	.	ID=gene393;Name=insB;Dbxref=GeneID:7147178;gbkey=Gene;gene=insB;locus_tag=EC55989_0390
NC_011748.1	RefSeq	CDS	426499	427002	.	-	0	ID=cds366;Name=YP_002401510.1;Parent=gene393;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 9689094%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002401510.1,GeneID:7147178;gbkey=CDS;product=IS1 transposase InsAB%27;protein_id=YP_002401510.1;transl_table=11
NC_011748.1	RefSeq	gene	426921	427196	.	-	.	ID=gene394;Name=insA;Dbxref=GeneID:7146580;gbkey=Gene;gene=insA;locus_tag=EC55989_0391
NC_011748.1	RefSeq	CDS	426921	427196	.	-	0	ID=cds367;Name=YP_002401511.1;Parent=gene394;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 9689094%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002401511.1,GeneID:7146580;gbkey=CDS;product=IS1 repressor protein InsA;protein_id=YP_002401511.1;transl_table=11
NC_011748.1	RefSeq	gene	427431	428378	.	+	.	ID=gene395;Name=phoA;Dbxref=GeneID:7146568;gbkey=Gene;gene=phoA;locus_tag=EC55989_0392;pseudo=true
NC_011748.1	RefSeq	region	427431	428378	.	+	.	ID=id32;Note=fragment of bacterial alkaline phosphatase %28part 2%29%3BEvidence 7 : Gene remnant%3B Product type e : enzyme;Dbxref=GeneID:7146568;gbkey=misc_feature
NC_011748.1	RefSeq	gene	428497	428817	.	+	.	ID=gene396;Name=psiF;Dbxref=GeneID:7147179;gbkey=Gene;gene=psiF;locus_tag=EC55989_0393
NC_011748.1	RefSeq	CDS	428497	428817	.	+	0	ID=cds368;Name=YP_002401512.1;Parent=gene396;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 3533724%2C 2160940%3B Product type f : factor;Dbxref=Genbank:YP_002401512.1,GeneID:7147179;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401512.1;transl_table=11
NC_011748.1	RefSeq	gene	428919	430034	.	+	.	ID=gene397;Name=adrA;Dbxref=GeneID:7147269;gbkey=Gene;gene=adrA;locus_tag=EC55989_0394
NC_011748.1	RefSeq	CDS	428919	430034	.	+	0	ID=cds369;Name=YP_002401513.1;Parent=gene397;Note=catalyzes the conversion of 2 GTP into c-di-GMP%3B adrA overexpression induces cellulose biosynthesis%2C cell adherence to abiotic surfaces and swimming and swarming motility%3B AdrA acts post-transcriptionally on the bcsABZC operon activating cellulose biosynthesis;Dbxref=Genbank:YP_002401513.1,GeneID:7147269;gbkey=CDS;product=diguanylate cyclase AdrA;protein_id=YP_002401513.1;transl_table=11
NC_011748.1	RefSeq	gene	430051	430860	.	-	.	ID=gene398;Name=proC;Dbxref=GeneID:7148075;gbkey=Gene;gene=proC;locus_tag=EC55989_0395
NC_011748.1	RefSeq	CDS	430051	430860	.	-	0	ID=cds370;Name=YP_002401514.1;Parent=gene398;Note=catalyzes the formation of L-proline from pyrroline-5-carboxylate;Dbxref=Genbank:YP_002401514.1,GeneID:7148075;gbkey=CDS;product=pyrroline-5-carboxylate reductase;protein_id=YP_002401514.1;transl_table=11
NC_011748.1	RefSeq	gene	430980	431438	.	+	.	ID=gene399;Name=yaiI;Dbxref=GeneID:7147254;gbkey=Gene;gene=yaiI;locus_tag=EC55989_0396
NC_011748.1	RefSeq	CDS	430980	431438	.	+	0	ID=cds371;Name=YP_002401515.1;Parent=gene399;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002401515.1,GeneID:7147254;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401515.1;transl_table=11
NC_011748.1	RefSeq	gene	431621	432145	.	+	.	ID=gene400;Name=aroL;Dbxref=GeneID:7148077;gbkey=Gene;gene=aroL;locus_tag=EC55989_0397
NC_011748.1	RefSeq	CDS	431621	432145	.	+	0	ID=cds372;Name=YP_002401516.1;Parent=gene400;Note=type II enzyme similar to type I but differentially regulated and with a lower Km%3B catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis;Dbxref=Genbank:YP_002401516.1,GeneID:7148077;gbkey=CDS;product=shikimate kinase;protein_id=YP_002401516.1;transl_table=11
NC_011748.1	RefSeq	gene	432195	432386	.	+	.	ID=gene401;Name=yaiA;Dbxref=GeneID:7145548;gbkey=Gene;gene=yaiA;locus_tag=EC55989_0398
NC_011748.1	RefSeq	CDS	432195	432386	.	+	0	ID=cds373;Name=YP_002401517.1;Parent=gene401;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002401517.1,GeneID:7145548;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401517.1;transl_table=11
NC_011748.1	RefSeq	gene	432644	433321	.	+	.	ID=gene402;Name=aroM;Dbxref=GeneID:7148073;gbkey=Gene;gene=aroM;locus_tag=EC55989_0399
NC_011748.1	RefSeq	CDS	432644	433321	.	+	0	ID=cds374;Name=YP_002401518.1;Parent=gene402;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 86085675%2C 3001025;Dbxref=Genbank:YP_002401518.1,GeneID:7148073;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401518.1;transl_table=11
NC_011748.1	RefSeq	gene	433393	433677	.	+	.	ID=gene403;Name=yaiE;Dbxref=GeneID:7145549;gbkey=Gene;gene=yaiE;locus_tag=EC55989_0400
NC_011748.1	RefSeq	CDS	433393	433677	.	+	0	ID=cds375;Name=YP_002401519.1;Parent=gene403;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002401519.1,GeneID:7145549;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401519.1;transl_table=11
NC_011748.1	RefSeq	gene	433938	434300	.	+	.	ID=gene404;Name=EC55989_0401;Dbxref=GeneID:7148076;gbkey=Gene;locus_tag=EC55989_0401
NC_011748.1	RefSeq	CDS	433938	434300	.	+	0	ID=cds376;Name=YP_002401520.1;Parent=gene404;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002401520.1,GeneID:7148076;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401520.1;transl_table=11
NC_011748.1	RefSeq	gene	434378	435289	.	-	.	ID=gene405;Name=rdgC;Dbxref=GeneID:7144421;gbkey=Gene;gene=rdgC;locus_tag=EC55989_0402
NC_011748.1	RefSeq	CDS	434378	435289	.	-	0	ID=cds377;Name=YP_002401521.1;Parent=gene405;Note=Required for efficient pilin antigenic variation;Dbxref=Genbank:YP_002401521.1,GeneID:7144421;gbkey=CDS;product=recombination associated protein;protein_id=YP_002401521.1;transl_table=11
NC_011748.1	RefSeq	gene	435414	436322	.	+	.	ID=gene406;Name=mak;Dbxref=GeneID:7147352;gbkey=Gene;gene=mak;locus_tag=EC55989_0403
NC_011748.1	RefSeq	CDS	435414	436322	.	+	0	ID=cds378;Name=YP_002401522.1;Parent=gene406;Note=catalyzes phosphorylation of fructose%3B cytosolic enzyme;Dbxref=Genbank:YP_002401522.1,GeneID:7147352;gbkey=CDS;product=fructokinase;protein_id=YP_002401522.1;transl_table=11
NC_011748.1	RefSeq	gene	436465	437649	.	-	.	ID=gene407;Name=araJ;Dbxref=GeneID:7146767;gbkey=Gene;gene=araJ;locus_tag=EC55989_0404
NC_011748.1	RefSeq	CDS	436465	437649	.	-	0	ID=cds379;Name=YP_002401523.1;Parent=gene407;Note=member of the major facilitator superfamily %28MFS%29 of transporters%3B unknown function%3B may be associated with transport or processing of arabinose polymers;Dbxref=Genbank:YP_002401523.1,GeneID:7146767;gbkey=CDS;product=MFS transport protein AraJ;protein_id=YP_002401523.1;transl_table=11
NC_011748.1	RefSeq	gene	437775	440918	.	-	.	ID=gene408;Name=sbcC;Dbxref=GeneID:7145521;gbkey=Gene;gene=sbcC;locus_tag=EC55989_0405
NC_011748.1	RefSeq	CDS	437775	440918	.	-	0	ID=cds380;Name=YP_002401524.1;Parent=gene408;Note=with SbcD cleaves DNA hairpin structures%3B also has 5%27 single-strand endonuclease activity;Dbxref=Genbank:YP_002401524.1,GeneID:7145521;gbkey=CDS;product=exonuclease SbcC;protein_id=YP_002401524.1;transl_table=11
NC_011748.1	RefSeq	gene	440915	442117	.	-	.	ID=gene409;Name=sbcD;Dbxref=GeneID:7147607;gbkey=Gene;gene=sbcD;locus_tag=EC55989_0406
NC_011748.1	RefSeq	CDS	440915	442117	.	-	0	ID=cds381;Name=YP_002401525.1;Parent=gene409;Note=with SbcC cleaves DNA hairpin structure%2C also has 5%27 single-strand endonuclease activity;Dbxref=Genbank:YP_002401525.1,GeneID:7147607;gbkey=CDS;product=exonuclease SbcD;protein_id=YP_002401525.1;transl_table=11
NC_011748.1	RefSeq	gene	442307	442996	.	+	.	ID=gene410;Name=phoB;Dbxref=GeneID:7147608;gbkey=Gene;gene=phoB;locus_tag=EC55989_0407
NC_011748.1	RefSeq	CDS	442307	442996	.	+	0	ID=cds382;Name=YP_002401526.1;Parent=gene410;Note=two component response regulator for the phosphate regulon%3B PhoR phosphorylates PhoB;Dbxref=Genbank:YP_002401526.1,GeneID:7147608;gbkey=CDS;product=transcriptional regulator PhoB;protein_id=YP_002401526.1;transl_table=11
NC_011748.1	RefSeq	gene	443054	444349	.	+	.	ID=gene411;Name=phoR;Dbxref=GeneID:7147180;gbkey=Gene;gene=phoR;locus_tag=EC55989_0408
NC_011748.1	RefSeq	CDS	443054	444349	.	+	0	ID=cds383;Name=YP_002401527.1;Parent=gene411;Note=membrane-associated histidine protein kinase that phosphorylates phoB in response to environmental signals as part of the two-component phosphate regulatory system phoR%2FphoB;Dbxref=Genbank:YP_002401527.1,GeneID:7147180;gbkey=CDS;product=phosphate regulon sensor protein;protein_id=YP_002401527.1;transl_table=11
NC_011748.1	RefSeq	gene	444360	444470	.	-	.	ID=gene412;Name=EC55989_0409;Dbxref=GeneID:7147185;gbkey=Gene;locus_tag=EC55989_0409
NC_011748.1	RefSeq	CDS	444360	444470	.	-	0	ID=cds384;Name=YP_002401528.1;Parent=gene412;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002401528.1,GeneID:7147185;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401528.1;transl_table=11
NC_011748.1	RefSeq	gene	444756	446075	.	+	.	ID=gene413;Name=brnQ;Dbxref=GeneID:7144422;gbkey=Gene;gene=brnQ;locus_tag=EC55989_0410
NC_011748.1	RefSeq	CDS	444756	446075	.	+	0	ID=cds385;Name=YP_002401529.1;Parent=gene413;Note=Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism%3B PubMedId : 3078876%2C 6998958%2C 3550103%2C 7984428%3B Product type t : transporter;Dbxref=Genbank:YP_002401529.1,GeneID:7144422;gbkey=CDS;product=branched chain amino acid transporter %28LIV-II%29;protein_id=YP_002401529.1;transl_table=11
NC_011748.1	RefSeq	gene	446151	447524	.	+	.	ID=gene414;Name=proY;Dbxref=GeneID:7145636;gbkey=Gene;gene=proY;locus_tag=EC55989_0411
NC_011748.1	RefSeq	CDS	446151	447524	.	+	0	ID=cds386;Name=YP_002401530.1;Parent=gene414;Note=cryptic permease that may be involved in the transport of proline across the inner membrane%3B in Salmonella typhimurium%2C the proY gene is silent unless overexpressed on a multicopy plasmid or activated by a proZ mutation;Dbxref=Genbank:YP_002401530.1,GeneID:7145636;gbkey=CDS;product=proline-specific permease;protein_id=YP_002401530.1;transl_table=11
NC_011748.1	RefSeq	gene	447680	449497	.	+	.	ID=gene415;Name=malZ;Dbxref=GeneID:7147261;gbkey=Gene;gene=malZ;locus_tag=EC55989_0412
NC_011748.1	RefSeq	CDS	447680	449497	.	+	0	ID=cds387;Name=YP_002401531.1;Parent=gene415;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 92184757%2C 1706703%2C 1918057%3B Product type e : enzyme;Dbxref=Genbank:YP_002401531.1,GeneID:7147261;gbkey=CDS;product=maltodextrin glucosidase;protein_id=YP_002401531.1;transl_table=11
NC_011748.1	RefSeq	gene	449502	450083	.	-	.	ID=gene416;Name=acpH;Dbxref=GeneID:7146780;gbkey=Gene;gene=acpH;locus_tag=EC55989_0413
NC_011748.1	RefSeq	CDS	449502	450083	.	-	0	ID=cds388;Name=YP_002401532.1;Parent=gene416;Note=Converts holo-ACP to apo-ACP by hydrolytic cleavage of the phosphopantetheine prosthetic group from ACP;Dbxref=Genbank:YP_002401532.1,GeneID:7146780;gbkey=CDS;product=ACP phosphodieterase;protein_id=YP_002401532.1;transl_table=11
NC_011748.1	RefSeq	gene	450176	451246	.	+	.	ID=gene417;Name=queA;Dbxref=GeneID:7145440;gbkey=Gene;gene=queA;locus_tag=EC55989_0414
NC_011748.1	RefSeq	CDS	450176	451246	.	+	0	ID=cds389;Name=YP_002401533.1;Parent=gene417;Note=Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step;Dbxref=Genbank:YP_002401533.1,GeneID:7145440;gbkey=CDS;product=S-adenosylmethionine--tRNA ribosyltransferase-isomerase;protein_id=YP_002401533.1;transl_table=11
NC_011748.1	RefSeq	gene	451302	452429	.	+	.	ID=gene418;Name=tgt;Dbxref=GeneID:7147331;gbkey=Gene;gene=tgt;locus_tag=EC55989_0415
NC_011748.1	RefSeq	CDS	451302	452429	.	+	0	ID=cds390;Name=YP_002401534.1;Parent=gene418;Note=Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU%28N%29 anticodons %28tRNA-Asp%2C -Asn%2C -His and -Tyr%29;Dbxref=Genbank:YP_002401534.1,GeneID:7147331;gbkey=CDS;product=queuine tRNA-ribosyltransferase;protein_id=YP_002401534.1;transl_table=11
NC_011748.1	RefSeq	gene	452452	452784	.	+	.	ID=gene419;Name=yajC;Dbxref=GeneID:7147781;gbkey=Gene;gene=yajC;locus_tag=EC55989_0416
NC_011748.1	RefSeq	CDS	452452	452784	.	+	0	ID=cds391;Name=YP_002401535.1;Parent=gene419;Note=member of preprotein translocase%3B forms a heterotrimer with SecD and SecF%3B links the SecD%2FSecF%2FYajC%2FYidC complex with the SecY%2FSecE%2FSecG complex;Dbxref=Genbank:YP_002401535.1,GeneID:7147781;gbkey=CDS;product=preprotein translocase subunit YajC;protein_id=YP_002401535.1;transl_table=11
NC_011748.1	RefSeq	gene	452812	454659	.	+	.	ID=gene420;Name=secD;Dbxref=GeneID:7148087;gbkey=Gene;gene=secD;locus_tag=EC55989_0417
NC_011748.1	RefSeq	CDS	452812	454659	.	+	0	ID=cds392;Name=YP_002401536.1;Parent=gene420;Note=part of the preprotein secretory system%3B when complexed with proteins SecF and YajC%2C SecDFyajC stimulates the proton motive force-driven protein translocation%2C and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane;Dbxref=Genbank:YP_002401536.1,GeneID:7148087;gbkey=CDS;product=preprotein translocase subunit SecD;protein_id=YP_002401536.1;transl_table=11
NC_011748.1	RefSeq	gene	454670	455641	.	+	.	ID=gene421;Name=secF;Dbxref=GeneID:7147622;gbkey=Gene;gene=secF;locus_tag=EC55989_0418
NC_011748.1	RefSeq	CDS	454670	455641	.	+	0	ID=cds393;Name=YP_002401537.1;Parent=gene421;Note=forms a complex with SecD and YajC%3B SecDFyajC stimulates the proton motive force-driven protein translocation%3B seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane%3B in some organisms%2C such as Bacillus subtilis%2C SecD is fused to SecF;Dbxref=Genbank:YP_002401537.1,GeneID:7147622;gbkey=CDS;product=preprotein translocase subunit SecF;protein_id=YP_002401537.1;transl_table=11
NC_011748.1	RefSeq	gene	455770	456117	.	+	.	ID=gene422;Name=yajD;Dbxref=GeneID:7147624;gbkey=Gene;gene=yajD;locus_tag=EC55989_0419
NC_011748.1	RefSeq	CDS	455770	456117	.	+	0	ID=cds394;Name=YP_002401538.1;Parent=gene422;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002401538.1,GeneID:7147624;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401538.1;transl_table=11
NC_011748.1	RefSeq	gene	456294	457178	.	-	.	ID=gene423;Name=tsx;Dbxref=GeneID:7148088;gbkey=Gene;gene=tsx;locus_tag=EC55989_0420
NC_011748.1	RefSeq	CDS	456294	457178	.	-	0	ID=cds395;Name=YP_002401539.1;Parent=gene423;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 91092502%2C 91358319%2C 93352541%3B Product type m : membrane component;Dbxref=Genbank:YP_002401539.1,GeneID:7148088;gbkey=CDS;product=nucleoside channel phage T6%2Fcolicin K receptor;protein_id=YP_002401539.1;transl_table=11
NC_011748.1	RefSeq	gene	457477	457899	.	-	.	ID=gene424;Name=yajI;Dbxref=GeneID:7147868;gbkey=Gene;gene=yajI;locus_tag=EC55989_0421;pseudo=true
NC_011748.1	RefSeq	region	457477	457899	.	-	.	ID=id33;Note=fragment of  lipoprotein %28partial%29%3BEvidence 7 : Gene remnant%3B Product type lp : lipoprotein;Dbxref=GeneID:7147868;gbkey=misc_feature
NC_011748.1	RefSeq	gene	457903	458076	.	-	.	ID=gene425;Name=EC55989_0422;Dbxref=GeneID:7148090;gbkey=Gene;locus_tag=EC55989_0422;pseudo=true
NC_011748.1	RefSeq	region	457903	458076	.	-	.	ID=id34;Note=fragment of   protein %28partial%29%3BEvidence 7 : Gene remnant;Dbxref=GeneID:7148090;gbkey=misc_feature
NC_011748.1	RefSeq	gene	458167	458616	.	+	.	ID=gene426;Name=nrdR;Dbxref=GeneID:7144423;gbkey=Gene;gene=nrdR;locus_tag=EC55989_0423
NC_011748.1	RefSeq	CDS	458167	458616	.	+	0	ID=cds396;Name=YP_002401540.1;Parent=gene426;Note=Evidence 2b : Function of strongly homologous gene%3B Product type r : regulator;Dbxref=Genbank:YP_002401540.1,GeneID:7144423;gbkey=CDS;product=transcriptional regulator NrdR;protein_id=YP_002401540.1;transl_table=11
NC_011748.1	RefSeq	gene	458620	459723	.	+	.	ID=gene427;Name=ribD;Dbxref=GeneID:7147026;gbkey=Gene;gene=ribD;locus_tag=EC55989_0424
NC_011748.1	RefSeq	CDS	458620	459723	.	+	0	ID=cds397;Name=YP_002401541.1;Parent=gene427;Note=riboflavin biosynthesis protein which catalyzes the deamination and reduction steps in the riboflavin biosynthesis pathway%3B catalyzes the formation of 5-amino-6-%285-phosphoribosylamino%29uracil from 2%2C5-diamino-6-hydroxy-4-%285-phosphoribosylamino%29pyrimidine and the formation of 5-amino-6-%285-phosphoribosylamino%29uracil from 5-amino-6-%285-phosphoribitylamino%29uracil;Dbxref=Genbank:YP_002401541.1,GeneID:7147026;gbkey=CDS;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase%2F5-amino-6-%285-phosphoribosylamino%29uracil reductase;protein_id=YP_002401541.1;transl_table=11
NC_011748.1	RefSeq	gene	459812	460282	.	+	.	ID=gene428;Name=ribH;Dbxref=GeneID:7147412;gbkey=Gene;gene=ribH;locus_tag=EC55989_0425
NC_011748.1	RefSeq	CDS	459812	460282	.	+	0	ID=cds398;Name=YP_002401542.1;Parent=gene428;Note=RibE%3B 6%2C7-diimethyl-8-ribityllumazine synthase%3B DMRL synthase%3B lumazine synthase%3B beta subunit of riboflavin synthase%3B condenses 5-amino-6-%281%27-D%29-ribityl-amino-2%2C4%281H%2C3H%29-pyrimidinedione with L-3%2C4-dihydrohy-2-butanone-4-phosphate to generate 6%2C6-dimethyl-8-lumazine %28DMRL%29%3B riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin %28vitamin B12%29%3B involved in the last steps of riboflavin biosynthesis%3B forms a 60mer %28icosahedral shell%29 in both Bacillus subtilis and Escherichia coli%3B in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit %28alpha%29 while in Escherichia coli it is not;Dbxref=Genbank:YP_002401542.1,GeneID:7147412;gbkey=CDS;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=YP_002401542.1;transl_table=11
NC_011748.1	RefSeq	gene	460302	460721	.	+	.	ID=gene429;Name=nusB;Dbxref=GeneID:7147413;gbkey=Gene;gene=nusB;locus_tag=EC55989_0426
NC_011748.1	RefSeq	CDS	460302	460721	.	+	0	ID=cds399;Name=YP_002401543.1;Parent=gene429;Note=Regulates rRNA biosynthesis by transcriptional antitermination;Dbxref=Genbank:YP_002401543.1,GeneID:7147413;gbkey=CDS;product=transcription antitermination protein NusB;protein_id=YP_002401543.1;transl_table=11
NC_011748.1	RefSeq	gene	460799	461776	.	+	.	ID=gene430;Name=thiL;Dbxref=GeneID:7147059;gbkey=Gene;gene=thiL;locus_tag=EC55989_0427
NC_011748.1	RefSeq	CDS	460799	461776	.	+	0	ID=cds400;Name=YP_002401544.1;Parent=gene430;Note=catalyzes the formation of thiamine diphosphate from thiamine phosphate ant ATP;Dbxref=Genbank:YP_002401544.1,GeneID:7147059;gbkey=CDS;product=thiamine monophosphate kinase;protein_id=YP_002401544.1;transl_table=11
NC_011748.1	RefSeq	gene	461754	462272	.	+	.	ID=gene431;Name=pgpA;Dbxref=GeneID:7147789;gbkey=Gene;gene=pgpA;locus_tag=EC55989_0428
NC_011748.1	RefSeq	CDS	461754	462272	.	+	0	ID=cds401;Name=YP_002401545.1;Parent=gene431;Note=hydrolyzes phosphatidylglycerophosphate to produce phosphatidylglycerol and phosphate;Dbxref=Genbank:YP_002401545.1,GeneID:7147789;gbkey=CDS;product=phosphatidylglycerophosphatase A;protein_id=YP_002401545.1;transl_table=11
NC_011748.1	RefSeq	gene	462326	463300	.	-	.	ID=gene432;Name=yajO;Dbxref=GeneID:7147154;gbkey=Gene;gene=yajO;locus_tag=EC55989_0429
NC_011748.1	RefSeq	CDS	462326	463300	.	-	0	ID=cds402;Name=YP_002401546.1;Parent=gene432;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 15292217%2C 16077126%3B Product type e : enzyme;Dbxref=Genbank:YP_002401546.1,GeneID:7147154;gbkey=CDS;product=aldoketo-oxidoreductase;protein_id=YP_002401546.1;transl_table=11
NC_011748.1	RefSeq	gene	463355	465217	.	-	.	ID=gene433;Name=dxs;Dbxref=GeneID:7148092;gbkey=Gene;gene=dxs;locus_tag=EC55989_0430
NC_011748.1	RefSeq	CDS	463355	465217	.	-	0	ID=cds403;Name=YP_002401547.1;Parent=gene433;Note=catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate;Dbxref=Genbank:YP_002401547.1,GeneID:7148092;gbkey=CDS;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=YP_002401547.1;transl_table=11
NC_011748.1	RefSeq	gene	465242	466141	.	-	.	ID=gene434;Name=ispA;Dbxref=GeneID:7145964;gbkey=Gene;gene=ispA;locus_tag=EC55989_0431
NC_011748.1	RefSeq	CDS	465242	466141	.	-	0	ID=cds404;Name=YP_002401548.1;Parent=gene434;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 89291702%2C 91210228%3B Product type e : enzyme;Dbxref=Genbank:YP_002401548.1,GeneID:7145964;gbkey=CDS;product=geranyltranstransferase;protein_id=YP_002401548.1;transl_table=11
NC_011748.1	RefSeq	gene	466141	466383	.	-	.	ID=gene435;Name=xseB;Dbxref=GeneID:7146625;gbkey=Gene;gene=xseB;locus_tag=EC55989_0432
NC_011748.1	RefSeq	CDS	466141	466383	.	-	0	ID=cds405;Name=YP_002401549.1;Parent=gene435;Note=catalyzes the bidirectional exonucleolytic cleavage of DNA;Dbxref=Genbank:YP_002401549.1,GeneID:7146625;gbkey=CDS;product=exodeoxyribonuclease VII small subunit;protein_id=YP_002401549.1;transl_table=11
NC_011748.1	RefSeq	gene	466589	468037	.	+	.	ID=gene436;Name=thiI;Dbxref=GeneID:7147993;gbkey=Gene;gene=thiI;locus_tag=EC55989_0434
NC_011748.1	RefSeq	CDS	466589	468037	.	+	0	ID=cds406;Name=YP_002401550.1;Parent=gene436;Note=Required for the synthesis of the thiazole moiety;Dbxref=Genbank:YP_002401550.1,GeneID:7147993;gbkey=CDS;product=thiamine biosynthesis protein ThiI;protein_id=YP_002401550.1;transl_table=11
NC_011748.1	RefSeq	gene	468091	468681	.	-	.	ID=gene437;Name=yajL;Dbxref=GeneID:7147788;gbkey=Gene;gene=yajL;locus_tag=EC55989_0435
NC_011748.1	RefSeq	CDS	468091	468681	.	-	0	ID=cds407;Name=YP_002401551.1;Parent=gene437;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 97039868%2C 99173753%2C 99311269;Dbxref=Genbank:YP_002401551.1,GeneID:7147788;gbkey=CDS;product=DJ-1 family protein;protein_id=YP_002401551.1;transl_table=11
NC_011748.1	RefSeq	gene	468644	469555	.	-	.	ID=gene438;Name=panE;Dbxref=GeneID:7148091;gbkey=Gene;gene=panE;locus_tag=EC55989_0436
NC_011748.1	RefSeq	CDS	468644	469555	.	-	0	ID=cds408;Name=YP_002401552.1;Parent=gene438;Note=ketopantoate reductase%3B catalyzes the NADPH reduction of ketopantoate to pantoate%3B functions in pantothenate %28vitamin B5%29 biosynthesis;Dbxref=Genbank:YP_002401552.1,GeneID:7148091;gbkey=CDS;product=2-dehydropantoate 2-reductase;protein_id=YP_002401552.1;transl_table=11
NC_011748.1	RefSeq	gene	469723	470214	.	+	.	ID=gene439;Name=yajQ;Dbxref=GeneID:7147113;gbkey=Gene;gene=yajQ;locus_tag=EC55989_0437
NC_011748.1	RefSeq	CDS	469723	470214	.	+	0	ID=cds409;Name=YP_002401553.1;Parent=gene439;Note=nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ%3B the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription;Dbxref=Genbank:YP_002401553.1,GeneID:7147113;gbkey=CDS;product=nucleotide-binding protein;protein_id=YP_002401553.1;transl_table=11
NC_011748.1	RefSeq	gene	470342	471706	.	-	.	ID=gene440;Name=yajR;Dbxref=GeneID:7148093;gbkey=Gene;gene=yajR;locus_tag=EC55989_0438
NC_011748.1	RefSeq	CDS	470342	471706	.	-	0	ID=cds410;Name=YP_002401554.1;Parent=gene440;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002401554.1,GeneID:7148093;gbkey=CDS;product=major facilitator family transporter;protein_id=YP_002401554.1;transl_table=11
NC_011748.1	RefSeq	gene	472054	473049	.	+	.	ID=gene441;Name=EC55989_0439;Dbxref=GeneID:7148094;gbkey=Gene;locus_tag=EC55989_0439
NC_011748.1	RefSeq	CDS	472054	473049	.	+	0	ID=cds411;Name=YP_002401555.1;Parent=gene441;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002401555.1,GeneID:7148094;gbkey=CDS;product=zinc-dependent hydrolase;protein_id=YP_002401555.1;transl_table=11
NC_011748.1	RefSeq	STS	472672	472759	.	+	.	ID=id35;Dbxref=UniSTS:237865,GeneID:7148094;gbkey=STS
NC_011748.1	RefSeq	gene	473105	473647	.	-	.	ID=gene442;Name=EC55989_0440;Dbxref=GeneID:7144424;gbkey=Gene;locus_tag=EC55989_0440
NC_011748.1	RefSeq	CDS	473105	473647	.	-	0	ID=cds412;Name=YP_002401556.1;Parent=gene442;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002401556.1,GeneID:7144424;gbkey=CDS;product=acetyltransferase;protein_id=YP_002401556.1;transl_table=11
NC_011748.1	RefSeq	gene	473631	474008	.	-	.	ID=gene443;Name=EC55989_0441;Dbxref=GeneID:7144425;gbkey=Gene;locus_tag=EC55989_0441
NC_011748.1	RefSeq	CDS	473631	474008	.	-	0	ID=cds413;Name=YP_002401557.1;Parent=gene443;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002401557.1,GeneID:7144425;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401557.1;transl_table=11
NC_011748.1	RefSeq	gene	474127	475017	.	-	.	ID=gene444;Name=cyoE;Dbxref=GeneID:7144426;gbkey=Gene;gene=cyoE;locus_tag=EC55989_0442
NC_011748.1	RefSeq	CDS	474127	475017	.	-	0	ID=cds414;Name=YP_002401558.1;Parent=gene444;Note=converts protoheme IX and farnesyl diphosphate to heme O;Dbxref=Genbank:YP_002401558.1,GeneID:7144426;gbkey=CDS;product=protoheme IX farnesyltransferase;protein_id=YP_002401558.1;transl_table=11
NC_011748.1	RefSeq	gene	475029	475358	.	-	.	ID=gene445;Name=cyoD;Dbxref=GeneID:7145819;gbkey=Gene;gene=cyoD;locus_tag=EC55989_0443
NC_011748.1	RefSeq	CDS	475029	475358	.	-	0	ID=cds415;Name=YP_002401559.1;Parent=gene445;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 90330636%2C 90366572%2C 92345252%2C 9378722%2C 98021084%2C 11017202%2C 2162835%3B Product type c : carrier;Dbxref=Genbank:YP_002401559.1,GeneID:7145819;gbkey=CDS;product=cytochrome o ubiquinol oxidase subunit IV;protein_id=YP_002401559.1;transl_table=11
NC_011748.1	RefSeq	gene	475358	475972	.	-	.	ID=gene446;Name=cyoC;Dbxref=GeneID:7145818;gbkey=Gene;gene=cyoC;locus_tag=EC55989_0444
NC_011748.1	RefSeq	CDS	475358	475972	.	-	0	ID=cds416;Name=YP_002401560.1;Parent=gene446;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 90330636%2C 92345252%2C 93349845%2C 9378722%2C 98021084%2C 11017202%2C 2162835%2C 2168206%3B Product type c : carrier;Dbxref=Genbank:YP_002401560.1,GeneID:7145818;gbkey=CDS;product=cytochrome o ubiquinol oxidase subunit III;protein_id=YP_002401560.1;transl_table=11
NC_011748.1	RefSeq	gene	475962	477953	.	-	.	ID=gene447;Name=cyoB;Dbxref=GeneID:7145817;gbkey=Gene;gene=cyoB;locus_tag=EC55989_0445
NC_011748.1	RefSeq	CDS	475962	477953	.	-	0	ID=cds417;Name=YP_002401561.1;Parent=gene447;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 90330636%2C 92345252%2C 93349845%2C 9378722%2C 98021084%2C 11017202%2C 2162835%2C 2168206%3B Product type c : carrier;Dbxref=Genbank:YP_002401561.1,GeneID:7145817;gbkey=CDS;product=cytochrome o ubiquinol oxidase subunit I;protein_id=YP_002401561.1;transl_table=11
NC_011748.1	RefSeq	gene	477975	478922	.	-	.	ID=gene448;Name=cyoA;Dbxref=GeneID:7145816;gbkey=Gene;gene=cyoA;locus_tag=EC55989_0446
NC_011748.1	RefSeq	CDS	477975	478922	.	-	0	ID=cds418;Name=YP_002401562.1;Parent=gene448;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 92112945%2C 92371427%2C 9378722%2C 98021084%2C 11017202%2C 1322173%2C 2162835%2C 2162837%2C 2165491%2C 2168206%2C 8231804%2C 8618822%3B Product type c : carrier;Dbxref=Genbank:YP_002401562.1,GeneID:7145816;gbkey=CDS;product=cytochrome o ubiquinol oxidase subunit II;protein_id=YP_002401562.1;transl_table=11
NC_011748.1	RefSeq	gene	479382	480857	.	-	.	ID=gene449;Name=ampG;Dbxref=GeneID:7145815;gbkey=Gene;gene=ampG;locus_tag=EC55989_0447
NC_011748.1	RefSeq	CDS	479382	480857	.	-	0	ID=cds419;Name=YP_002401563.1;Parent=gene449;Note=in Escherichia coli this protein is a permease involved in peptidoglycan recycling%3B member of major facilitator superfamily%3B MFS%3B inner membrane protein;Dbxref=Genbank:YP_002401563.1,GeneID:7145815;gbkey=CDS;product=muropeptide transporter;protein_id=YP_002401563.1;transl_table=11
NC_011748.1	RefSeq	gene	480901	481479	.	-	.	ID=gene450;Name=yajG;Dbxref=GeneID:7145497;gbkey=Gene;gene=yajG;locus_tag=EC55989_0448
NC_011748.1	RefSeq	CDS	480901	481479	.	-	0	ID=cds420;Name=YP_002401564.1;Parent=gene450;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type lp : lipoprotein;Dbxref=Genbank:YP_002401564.1,GeneID:7145497;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401564.1;transl_table=11
NC_011748.1	RefSeq	gene	481784	482101	.	+	.	ID=gene451;Name=bolA;Dbxref=GeneID:7148089;gbkey=Gene;gene=bolA;locus_tag=EC55989_0449
NC_011748.1	RefSeq	CDS	481784	482101	.	+	0	ID=cds421;Name=YP_002401565.1;Parent=gene451;Note=positive transcriptional regulator of morphogenetic pathway%3B controlling several genes involved in oxidative stress%2C acid stress%2C heat shock%2C osmotic shock%2C and carbon-starvation stress;Dbxref=Genbank:YP_002401565.1,GeneID:7148089;gbkey=CDS;product=transcriptional regulator BolA;protein_id=YP_002401565.1;transl_table=11
NC_011748.1	RefSeq	gene	482445	483743	.	+	.	ID=gene452;Name=tig;Dbxref=GeneID:7145635;gbkey=Gene;gene=tig;locus_tag=EC55989_0450
NC_011748.1	RefSeq	CDS	482445	483743	.	+	0	ID=cds422;Name=YP_002401566.1;Parent=gene452;Note=Tig%3B RopA%3B peptidyl-prolyl cis%2Ftrans isomerase%3B promotes folding of newly synthesized proteins%3B binds ribosomal 50S subunit%3B forms a homodimer;Dbxref=Genbank:YP_002401566.1,GeneID:7145635;gbkey=CDS;product=trigger factor;protein_id=YP_002401566.1;transl_table=11
NC_011748.1	RefSeq	gene	483989	484612	.	+	.	ID=gene453;Name=clpP;Dbxref=GeneID:7147801;gbkey=Gene;gene=clpP;locus_tag=EC55989_0451
NC_011748.1	RefSeq	CDS	483989	484612	.	+	0	ID=cds423;Name=YP_002401567.1;Parent=gene453;Note=hydrolyzes proteins to small peptides%3B with the ATPase subunits ClpA or ClpX%2C ClpP degrades specific substrates;Dbxref=Genbank:YP_002401567.1,GeneID:7147801;gbkey=CDS;product=ATP-dependent Clp protease proteolytic subunit;protein_id=YP_002401567.1;transl_table=11
NC_011748.1	RefSeq	gene	484738	486012	.	+	.	ID=gene454;Name=clpX;Dbxref=GeneID:7145724;gbkey=Gene;gene=clpX;locus_tag=EC55989_0452
NC_011748.1	RefSeq	CDS	484738	486012	.	+	0	ID=cds424;Name=YP_002401568.1;Parent=gene454;Note=binds and unfolds substrates as part of the ClpXP protease;Dbxref=Genbank:YP_002401568.1,GeneID:7145724;gbkey=CDS;product=ATP-dependent protease ATP-binding subunit ClpX;protein_id=YP_002401568.1;transl_table=11
NC_011748.1	RefSeq	gene	486037	486192	.	-	.	ID=gene455;Name=sraA;Dbxref=GeneID:7145726;gbkey=Gene;gene=sraA;locus_tag=EC55989_misc_RNA_11
NC_011748.1	RefSeq	transcript	486037	486192	.	-	.	ID=rna19;Parent=gene455;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 11448770%3B Product type n : RNA;Dbxref=GeneID:7145726;gbkey=misc_RNA;product=SraA
NC_011748.1	RefSeq	exon	486037	486192	.	-	.	ID=id36;Parent=rna19;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 11448770%3B Product type n : RNA;Dbxref=GeneID:7145726;gbkey=misc_RNA;product=SraA
NC_011748.1	RefSeq	gene	486200	488554	.	+	.	ID=gene456;Name=lon;Dbxref=GeneID:7147698;gbkey=Gene;gene=lon;locus_tag=EC55989_0453
NC_011748.1	RefSeq	CDS	486200	488554	.	+	0	ID=cds425;Name=YP_002401569.1;Parent=gene456;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 10094703%2C 14665623%2C 8939438%2C 91072263%2C 97137085%2C 2984174%2C 3042779%2C 3289547%2C 7988699%2C 8226758%2C 8294008%3B Product type e : enzyme;Dbxref=Genbank:YP_002401569.1,GeneID:7147698;gbkey=CDS;product=DNA-binding ATP-dependent protease La;protein_id=YP_002401569.1;transl_table=11
NC_011748.1	RefSeq	STS	486420	487520	.	+	.	ID=id37;Dbxref=UniSTS:148385,GeneID:7147698;gbkey=STS
NC_011748.1	RefSeq	gene	488763	489035	.	+	.	ID=gene457;Name=hupB;Dbxref=GeneID:7146720;gbkey=Gene;gene=hupB;locus_tag=EC55989_0454
NC_011748.1	RefSeq	CDS	488763	489035	.	+	0	ID=cds426;Name=YP_002401570.1;Parent=gene457;Note=histone-like DNA-binding protein;Dbxref=Genbank:YP_002401570.1,GeneID:7146720;gbkey=CDS;product=transcriptional regulator HU subunit beta;protein_id=YP_002401570.1;transl_table=11
NC_011748.1	RefSeq	gene	489227	491098	.	+	.	ID=gene458;Name=ppiD;Dbxref=GeneID:7146481;gbkey=Gene;gene=ppiD;locus_tag=EC55989_0455
NC_011748.1	RefSeq	CDS	489227	491098	.	+	0	ID=cds427;Name=YP_002401571.1;Parent=gene458;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 9670013%3B Product type e : enzyme;Dbxref=Genbank:YP_002401571.1,GeneID:7146481;gbkey=CDS;product=peptidyl-prolyl cis-trans isomerase;protein_id=YP_002401571.1;transl_table=11
NC_011748.1	RefSeq	gene	491249	491620	.	+	.	ID=gene459;Name=ybaV;Dbxref=GeneID:7147231;gbkey=Gene;gene=ybaV;locus_tag=EC55989_0456
NC_011748.1	RefSeq	CDS	491249	491620	.	+	0	ID=cds428;Name=YP_002401572.1;Parent=gene459;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002401572.1,GeneID:7147231;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401572.1;transl_table=11
NC_011748.1	RefSeq	gene	491714	492112	.	+	.	ID=gene460;Name=ybaW;Dbxref=GeneID:7148108;gbkey=Gene;gene=ybaW;locus_tag=EC55989_0457
NC_011748.1	RefSeq	CDS	491714	492112	.	+	0	ID=cds429;Name=YP_002401573.1;Parent=gene460;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002401573.1,GeneID:7148108;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401573.1;transl_table=11
NC_011748.1	RefSeq	gene	492164	492859	.	-	.	ID=gene461;Name=queC;Dbxref=GeneID:7148109;gbkey=Gene;gene=queC;locus_tag=EC55989_0458
NC_011748.1	RefSeq	CDS	492164	492859	.	-	0	ID=cds430;Name=YP_002401574.1;Parent=gene461;Note=YbaX%3B catalyzes the transformation of GTP to 7-cyano-7-deazaguanine %28preQ0%29%2C as one of the early reactions of quenosine biosynthesis%3B quenosine is a modified nucleoside that occurs at the wobble position of GUN anticodons in tRNAs for Asn%2C Asp%2C Tyr%2C and His;Dbxref=Genbank:YP_002401574.1,GeneID:7148109;gbkey=CDS;product=queuosine biosynthesis protein QueC;protein_id=YP_002401574.1;transl_table=11
NC_011748.1	RefSeq	gene	492924	494624	.	-	.	ID=gene462;Name=ybaE;Dbxref=GeneID:7147332;gbkey=Gene;gene=ybaE;locus_tag=EC55989_0459
NC_011748.1	RefSeq	CDS	492924	494624	.	-	0	ID=cds431;Name=YP_002401575.1;Parent=gene462;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002401575.1,GeneID:7147332;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401575.1;transl_table=11
NC_011748.1	RefSeq	gene	494724	495542	.	+	.	ID=gene463;Name=cof;Dbxref=GeneID:7148097;gbkey=Gene;gene=cof;locus_tag=EC55989_0460
NC_011748.1	RefSeq	CDS	494724	495542	.	+	0	ID=cds432;Name=YP_002401576.1;Parent=gene463;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 15292217%3B Product type e : enzyme;Dbxref=Genbank:YP_002401576.1,GeneID:7148097;gbkey=CDS;product=thiamin pyrimidine pyrophosphate hydrolase;protein_id=YP_002401576.1;transl_table=11
NC_011748.1	RefSeq	gene	495467	496153	.	+	.	ID=gene464;Name=ybaO;Dbxref=GeneID:7145741;gbkey=Gene;gene=ybaO;locus_tag=EC55989_0461
NC_011748.1	RefSeq	CDS	495467	496153	.	+	0	ID=cds433;Name=YP_002401577.1;Parent=gene464;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pr :  regulator;Dbxref=Genbank:YP_002401577.1,GeneID:7145741;gbkey=CDS;product=DNA-binding transcriptional regulator %28Lrp-like%29;protein_id=YP_002401577.1;transl_table=11
NC_011748.1	RefSeq	gene	496183	497955	.	+	.	ID=gene465;Name=mdlA;Dbxref=GeneID:7148103;gbkey=Gene;gene=mdlA;locus_tag=EC55989_0462
NC_011748.1	RefSeq	CDS	496183	497955	.	+	0	ID=cds434;Name=YP_002401578.1;Parent=gene465;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 94124004%2C 10850996%3B Product type pt :  transporter;Dbxref=Genbank:YP_002401578.1,GeneID:7148103;gbkey=CDS;product=multidrug transporter membrane%5CATP-binding components;protein_id=YP_002401578.1;transl_table=11
NC_011748.1	RefSeq	gene	497948	499729	.	+	.	ID=gene466;Name=mdlB;Dbxref=GeneID:7146795;gbkey=Gene;gene=mdlB;locus_tag=EC55989_0463
NC_011748.1	RefSeq	CDS	497948	499729	.	+	0	ID=cds435;Name=YP_002401579.1;Parent=gene466;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 94124004%3B Product type pt :  transporter;Dbxref=Genbank:YP_002401579.1,GeneID:7146795;gbkey=CDS;product=multidrug transporter membrane%5CATP-binding components;protein_id=YP_002401579.1;transl_table=11
NC_011748.1	RefSeq	gene	499910	500248	.	+	.	ID=gene467;Name=glnK;Dbxref=GeneID:7146796;gbkey=Gene;gene=glnK;locus_tag=EC55989_0464
NC_011748.1	RefSeq	CDS	499910	500248	.	+	0	ID=cds436;Name=YP_002401580.1;Parent=gene467;Note=indirectly regulates nitrogen metabolism%3B at high nitrogen levels P-II 2 prevents the phosphorylation of NR-I%2C the transcriptional activator of the glutamine synthetase gene %28glnA%29%3B at low nitrogen levels P-II 2 is uridylylated to form PII-UMP and interacts with an adenylyltransferase %28GlnE%29 that activates GlnA%3B functionally it is equivalent to protein P-II %28GlnB%29%2C but itsexpression is driven by the presence of uridylyltransferase%2C nitrogen regulator I%2C and the absence of ammonia.;Dbxref=Genbank:YP_002401580.1,GeneID:7146796;gbkey=CDS;product=nitrogen regulatory protein P-II 2;protein_id=YP_002401580.1;transl_table=11
NC_011748.1	RefSeq	gene	500278	501564	.	+	.	ID=gene468;Name=amtB;Dbxref=GeneID:7146308;gbkey=Gene;gene=amtB;locus_tag=EC55989_0465
NC_011748.1	RefSeq	CDS	500278	501564	.	+	0	ID=cds437;Name=YP_002401581.1;Parent=gene468;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 22020597%2C 9618533%2C 10931328%2C 1645722%2C 7984428%3B Product type t : transporter;Dbxref=Genbank:YP_002401581.1,GeneID:7146308;gbkey=CDS;product=ammonium transporter;protein_id=YP_002401581.1;transl_table=11
NC_011748.1	RefSeq	gene	501613	502473	.	-	.	ID=gene469;Name=tesB;Dbxref=GeneID:7145499;gbkey=Gene;gene=tesB;locus_tag=EC55989_0466
NC_011748.1	RefSeq	CDS	501613	502473	.	-	0	ID=cds438;Name=YP_002401582.1;Parent=gene469;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 86139906%2C 91250410%2C 10876240%3B Product type e : enzyme;Dbxref=Genbank:YP_002401582.1,GeneID:7145499;gbkey=CDS;product=acyl-CoA thioesterase;protein_id=YP_002401582.1;transl_table=11
NC_011748.1	RefSeq	gene	502691	503263	.	+	.	ID=gene470;Name=ybaY;Dbxref=GeneID:7147776;gbkey=Gene;gene=ybaY;locus_tag=EC55989_0467
NC_011748.1	RefSeq	CDS	502691	503263	.	+	0	ID=cds439;Name=YP_002401583.1;Parent=gene470;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002401583.1,GeneID:7147776;gbkey=CDS;product=lipoprotein;protein_id=YP_002401583.1;transl_table=11
NC_011748.1	RefSeq	gene	503294	503683	.	-	.	ID=gene471;Name=ybaZ;Dbxref=GeneID:7148110;gbkey=Gene;gene=ybaZ;locus_tag=EC55989_0468
NC_011748.1	RefSeq	CDS	503294	503683	.	-	0	ID=cds440;Name=YP_002401584.1;Parent=gene471;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002401584.1,GeneID:7148110;gbkey=CDS;product=methylated DNA-protein cysteine alkyltransferase;protein_id=YP_002401584.1;transl_table=11
NC_011748.1	RefSeq	gene	503737	503874	.	+	.	ID=gene472;Name=ffs;Dbxref=GeneID:7148111;gbkey=Gene;gene=ffs;locus_tag=EC55989_misc_RNA_12
NC_011748.1	RefSeq	transcript	503737	503874	.	+	.	ID=rna20;Parent=gene472;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 1279430%3B Product type n : RNA;Dbxref=GeneID:7148111;gbkey=misc_RNA;product=4.5S
NC_011748.1	RefSeq	exon	503737	503874	.	+	.	ID=id38;Parent=rna20;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 1279430%3B Product type n : RNA;Dbxref=GeneID:7148111;gbkey=misc_RNA;product=4.5S
NC_011748.1	RefSeq	gene	503984	504337	.	+	.	ID=gene473;Name=ybaA;Dbxref=GeneID:7146096;gbkey=Gene;gene=ybaA;locus_tag=EC55989_0469
NC_011748.1	RefSeq	CDS	503984	504337	.	+	0	ID=cds441;Name=YP_002401585.1;Parent=gene473;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002401585.1,GeneID:7146096;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401585.1;transl_table=11
NC_011748.1	RefSeq	gene	504379	505929	.	-	.	ID=gene474;Name=ylaB;Dbxref=GeneID:7148095;gbkey=Gene;gene=ylaB;locus_tag=EC55989_0470
NC_011748.1	RefSeq	CDS	504379	505929	.	-	0	ID=cds442;Name=YP_002401586.1;Parent=gene474;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002401586.1,GeneID:7148095;gbkey=CDS;product=inner membrane protein;protein_id=YP_002401586.1;transl_table=11
NC_011748.1	RefSeq	gene	506093	506563	.	-	.	ID=gene475;Name=ylaC;Dbxref=GeneID:7149246;gbkey=Gene;gene=ylaC;locus_tag=EC55989_0471
NC_011748.1	RefSeq	CDS	506093	506563	.	-	0	ID=cds443;Name=YP_002401587.1;Parent=gene475;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002401587.1,GeneID:7149246;gbkey=CDS;product=inner membrane protein;protein_id=YP_002401587.1;transl_table=11
NC_011748.1	RefSeq	gene	506679	507230	.	-	.	ID=gene476;Name=maa;Dbxref=GeneID:7149247;gbkey=Gene;gene=maa;locus_tag=EC55989_0472
NC_011748.1	RefSeq	CDS	506679	507230	.	-	0	ID=cds444;Name=YP_002401588.1;Parent=gene476;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 82180540%2C 91310703%2C 9600841%3B Product type e : enzyme;Dbxref=Genbank:YP_002401588.1,GeneID:7149247;gbkey=CDS;product=maltose O-acetyltransferase;protein_id=YP_002401588.1;transl_table=11
NC_011748.1	RefSeq	gene	507401	507865	.	-	.	ID=gene477;Name=hha;Dbxref=GeneID:7146763;gbkey=Gene;gene=hha;locus_tag=EC55989_0473
NC_011748.1	RefSeq	CDS	507401	507865	.	-	0	ID=cds445;Name=YP_002401589.1;Parent=gene477;Note=Evidence 2b : Function of strongly homologous gene%3B PubMedId : 1956303%2C 1484495%3B Product type f : factor;Dbxref=Genbank:YP_002401589.1,GeneID:7146763;gbkey=CDS;product=modulator of gene expression%2C with H-NS;protein_id=YP_002401589.1;transl_table=11
NC_011748.1	RefSeq	gene	507645	508019	.	-	.	ID=gene478;Name=ybaJ;Dbxref=GeneID:7146426;gbkey=Gene;gene=ybaJ;locus_tag=EC55989_0474
NC_011748.1	RefSeq	CDS	507645	508019	.	-	0	ID=cds446;Name=YP_002401590.1;Parent=gene478;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 1956303%2C 7984428%2C 14645275;Dbxref=Genbank:YP_002401590.1,GeneID:7146426;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401590.1;transl_table=11
NC_011748.1	RefSeq	gene	508565	511714	.	-	.	ID=gene479;Name=acrB;Dbxref=GeneID:7148098;gbkey=Gene;gene=acrB;locus_tag=EC55989_0475
NC_011748.1	RefSeq	CDS	508565	511714	.	-	0	ID=cds447;Name=YP_002401591.1;Parent=gene479;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 12351840%2C 12654283%2C 15111118%2C 15155734%2C 21450803%2C 94012493%2C 10920254%2C 7651136%3B Product type t : transporter;Dbxref=Genbank:YP_002401591.1,GeneID:7148098;gbkey=CDS;product=multidrug efflux system protein;protein_id=YP_002401591.1;transl_table=11
NC_011748.1	RefSeq	gene	511737	512930	.	-	.	ID=gene480;Name=acrA;Dbxref=GeneID:7145445;gbkey=Gene;gene=acrA;locus_tag=EC55989_0476
NC_011748.1	RefSeq	CDS	511737	512930	.	-	0	ID=cds448;Name=YP_002401592.1;Parent=gene480;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 15155734%2C 21450803%2C 383699%2C 390095%2C 94012493%2C 10920254%2C 7651136%3B Product type t : transporter;Dbxref=Genbank:YP_002401592.1,GeneID:7145445;gbkey=CDS;product=multidrug efflux system;protein_id=YP_002401592.1;transl_table=11
NC_011748.1	RefSeq	gene	513072	513719	.	+	.	ID=gene481;Name=acrR;Dbxref=GeneID:7145444;gbkey=Gene;gene=acrR;locus_tag=EC55989_0477
NC_011748.1	RefSeq	CDS	513072	513719	.	+	0	ID=cds449;Name=YP_002401593.1;Parent=gene481;Note=regulates the acrAB operon which is involved in susceptibility to dephalothin and cephaloridine;Dbxref=Genbank:YP_002401593.1,GeneID:7145444;gbkey=CDS;product=DNA-binding transcriptional repressor AcrR;protein_id=YP_002401593.1;transl_table=11
NC_011748.1	RefSeq	gene	513847	517209	.	+	.	ID=gene482;Name=kefA;Dbxref=GeneID:7145449;gbkey=Gene;gene=kefA;locus_tag=EC55989_0478
NC_011748.1	RefSeq	CDS	513847	517209	.	+	0	ID=cds450;Name=YP_002401594.1;Parent=gene482;Note=small mechanosensitive ion channel %28MscS%29 that opens in response to stretch forces in the membrane lipid bilayer%3B maintains cell turgor through accumulation and release of potassium%3B large protein class of MscS;Dbxref=Genbank:YP_002401594.1,GeneID:7145449;gbkey=CDS;product=potassium efflux protein KefA;protein_id=YP_002401594.1;transl_table=11
NC_011748.1	RefSeq	gene	517421	517582	.	-	.	ID=gene483;Name=ybaM;Dbxref=GeneID:7146666;gbkey=Gene;gene=ybaM;locus_tag=EC55989_0479
NC_011748.1	RefSeq	CDS	517421	517582	.	-	0	ID=cds451;Name=YP_002401595.1;Parent=gene483;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002401595.1,GeneID:7146666;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401595.1;transl_table=11
NC_011748.1	RefSeq	gene	517596	518123	.	-	.	ID=gene484;Name=priC;Dbxref=GeneID:7148101;gbkey=Gene;gene=priC;locus_tag=EC55989_0480
NC_011748.1	RefSeq	CDS	517596	518123	.	-	0	ID=cds452;Name=YP_002401596.1;Parent=gene484;Note=PriC%3B protein involved in DNA replication%3B part of the primosome%2C a protein complex required to restart stalled replication forks%3B binds the complex formed by PriA%2C PriB and DNA%3B PriC-dependent primosome requires a gap to restart DNA replication%3B stimulates Rep activity at stalled forks;Dbxref=Genbank:YP_002401596.1,GeneID:7148101;gbkey=CDS;product=primosomal replication protein N%27%27;protein_id=YP_002401596.1;transl_table=11
NC_011748.1	RefSeq	gene	518193	518570	.	+	.	ID=gene485;Name=ybaN;Dbxref=GeneID:7147246;gbkey=Gene;gene=ybaN;locus_tag=EC55989_0481
NC_011748.1	RefSeq	CDS	518193	518570	.	+	0	ID=cds453;Name=YP_002401597.1;Parent=gene485;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002401597.1,GeneID:7147246;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401597.1;transl_table=11
NC_011748.1	RefSeq	gene	518723	519274	.	+	.	ID=gene486;Name=apt;Dbxref=GeneID:7148102;gbkey=Gene;gene=apt;locus_tag=EC55989_0482
NC_011748.1	RefSeq	CDS	518723	519274	.	+	0	ID=cds454;Name=YP_002401598.1;Parent=gene486;Note=catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis;Dbxref=Genbank:YP_002401598.1,GeneID:7148102;gbkey=CDS;product=adenine phosphoribosyltransferase;protein_id=YP_002401598.1;transl_table=11
NC_011748.1	RefSeq	gene	519403	521334	.	+	.	ID=gene487;Name=dnaX;Dbxref=GeneID:7145511;gbkey=Gene;gene=dnaX;locus_tag=EC55989_0483
NC_011748.1	RefSeq	CDS	519403	521334	.	+	0	ID=cds455;Name=YP_002401599.1;Parent=gene487;Note=catalyzes the DNA-template-directed extension of the 3%27-end of a DNA strand%3B the tau chain serves as a scaffold to help in the dimerizaton of the alpha%2Cepsilon and theta core complex%3B the gamma chain seems to interact with the delta and delta%27 subunits to transfer the beta subunit on the DNA;Dbxref=Genbank:YP_002401599.1,GeneID:7145511;gbkey=CDS;product=DNA polymerase III subunits gamma and tau;protein_id=YP_002401599.1;transl_table=11
NC_011748.1	RefSeq	gene	521387	521716	.	+	.	ID=gene488;Name=ybaB;Dbxref=GeneID:7145942;gbkey=Gene;gene=ybaB;locus_tag=EC55989_0484
NC_011748.1	RefSeq	CDS	521387	521716	.	+	0	ID=cds456;Name=YP_002401600.1;Parent=gene488;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 15322138%2C 1698765%2C 2674903;Dbxref=Genbank:YP_002401600.1,GeneID:7145942;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401600.1;transl_table=11
NC_011748.1	RefSeq	gene	521716	522321	.	+	.	ID=gene489;Name=recR;Dbxref=GeneID:7148096;gbkey=Gene;gene=recR;locus_tag=EC55989_0485
NC_011748.1	RefSeq	CDS	521716	522321	.	+	0	ID=cds457;Name=YP_002401601.1;Parent=gene489;Note=involved in a recombinational process of DNA repair%2C independent of the recBC complex;Dbxref=Genbank:YP_002401601.1,GeneID:7148096;gbkey=CDS;product=recombination protein RecR;protein_id=YP_002401601.1;transl_table=11
NC_011748.1	RefSeq	gene	522431	524305	.	+	.	ID=gene490;Name=htpG;Dbxref=GeneID:7147367;gbkey=Gene;gene=htpG;locus_tag=EC55989_0486
NC_011748.1	RefSeq	CDS	522431	524305	.	+	0	ID=cds458;Name=YP_002401602.1;Parent=gene490;Note=molecular chaperone;Dbxref=Genbank:YP_002401602.1,GeneID:7147367;gbkey=CDS;product=heat shock protein 90;protein_id=YP_002401602.1;transl_table=11
NC_011748.1	RefSeq	gene	524486	525130	.	+	.	ID=gene491;Name=adk;Dbxref=GeneID:7146473;gbkey=Gene;gene=adk;locus_tag=EC55989_0487
NC_011748.1	RefSeq	CDS	524486	525130	.	+	0	ID=cds459;Name=YP_002401603.1;Parent=gene491;Note=essential enzyme that recycles AMP in active cells%3B converts ATP and AMP to two molecules of ADP;Dbxref=Genbank:YP_002401603.1,GeneID:7146473;gbkey=CDS;product=adenylate kinase;protein_id=YP_002401603.1;transl_table=11
NC_011748.1	RefSeq	gene	525366	526328	.	+	.	ID=gene492;Name=hemH;Dbxref=GeneID:7145460;gbkey=Gene;gene=hemH;locus_tag=EC55989_0488
NC_011748.1	RefSeq	CDS	525366	526328	.	+	0	ID=cds460;Name=YP_002401604.1;Parent=gene492;Note=protoheme ferro-lyase%3B catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme%3B involved in protoheme biosynthesis%3B in some organisms this protein is membrane-associated while in others it is cytosolic;Dbxref=Genbank:YP_002401604.1,GeneID:7145460;gbkey=CDS;product=ferrochelatase;protein_id=YP_002401604.1;transl_table=11
NC_011748.1	RefSeq	gene	526325	527284	.	-	.	ID=gene493;Name=aes;Dbxref=GeneID:7146414;gbkey=Gene;gene=aes;locus_tag=EC55989_0489
NC_011748.1	RefSeq	CDS	526325	527284	.	-	0	ID=cds461;Name=YP_002401605.1;Parent=gene493;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 9401025%2C 98244813%2C 2051480%2C 7721718%3B Product type e : enzyme;Dbxref=Genbank:YP_002401605.1,GeneID:7146414;gbkey=CDS;product=acetyl esterase;protein_id=YP_002401605.1;transl_table=11
NC_011748.1	RefSeq	gene	527436	528740	.	+	.	ID=gene494;Name=gsk;Dbxref=GeneID:7145464;gbkey=Gene;gene=gsk;locus_tag=EC55989_0490
NC_011748.1	RefSeq	CDS	527436	528740	.	+	0	ID=cds462;Name=YP_002401606.1;Parent=gene494;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 90155203%2C 95238302%2C 2051480%3B Product type e : enzyme;Dbxref=Genbank:YP_002401606.1,GeneID:7145464;gbkey=CDS;product=inosine%2Fguanosine kinase;protein_id=YP_002401606.1;transl_table=11
NC_011748.1	RefSeq	gene	528873	530549	.	-	.	ID=gene495;Name=ybaL;Dbxref=GeneID:7146375;gbkey=Gene;gene=ybaL;locus_tag=EC55989_0491
NC_011748.1	RefSeq	CDS	528873	530549	.	-	0	ID=cds463;Name=YP_002401607.1;Parent=gene495;Note=YbaL%3B member of the CPA-2 family of antiporters%3B uncharacterized protein;Dbxref=Genbank:YP_002401607.1,GeneID:7146375;gbkey=CDS;product=cation:proton antiport protein;protein_id=YP_002401607.1;transl_table=11
NC_011748.1	RefSeq	gene	530787	532007	.	-	.	ID=gene496;Name=fsr;Dbxref=GeneID:7148100;gbkey=Gene;gene=fsr;locus_tag=EC55989_0492
NC_011748.1	RefSeq	CDS	530787	532007	.	-	0	ID=cds464;Name=YP_002401608.1;Parent=gene496;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 21450803%2C 97074653%2C 8917080%3B Product type t : transporter;Dbxref=Genbank:YP_002401608.1,GeneID:7148100;gbkey=CDS;product=fosmidomycin efflux system%2C member of the major facilitator superfamily;protein_id=YP_002401608.1;transl_table=11
NC_011748.1	RefSeq	gene	532225	533877	.	+	.	ID=gene497;Name=ushA;Dbxref=GeneID:7146208;gbkey=Gene;gene=ushA;locus_tag=EC55989_0493
NC_011748.1	RefSeq	CDS	532225	533877	.	+	0	ID=cds465;Name=YP_002401609.1;Parent=gene497;Note=catalyzes the degradation of periplasmic UDP-glucose to uridine%2C glucose-1-phosphate and inorganic phosphate%3B specific for uridine nucleotides;Dbxref=Genbank:YP_002401609.1,GeneID:7146208;gbkey=CDS;product=bifunctional UDP-sugar hydrolase%2F5%27-nucleotidase periplasmic;protein_id=YP_002401609.1;transl_table=11
NC_011748.1	RefSeq	gene	533716	533829	.	-	.	ID=gene498;Name=rybC;Dbxref=GeneID:7147927;gbkey=Gene;gene=rybC;locus_tag=EC55989_misc_RNA_13
NC_011748.1	RefSeq	transcript	533716	533829	.	-	.	ID=rna21;Parent=gene498;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 14622403%3B Product type n : RNA;Dbxref=GeneID:7147927;gbkey=misc_RNA;product=RybC
NC_011748.1	RefSeq	exon	533716	533829	.	-	.	ID=id39;Parent=rna21;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 14622403%3B Product type n : RNA;Dbxref=GeneID:7147927;gbkey=misc_RNA;product=RybC
NC_011748.1	RefSeq	gene	533914	534393	.	-	.	ID=gene499;Name=ybaK;Dbxref=GeneID:7147574;gbkey=Gene;gene=ybaK;locus_tag=EC55989_0494
NC_011748.1	RefSeq	CDS	533914	534393	.	-	0	ID=cds466;Name=YP_002401610.1;Parent=gene499;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002401610.1,GeneID:7147574;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401610.1;transl_table=11
NC_011748.1	RefSeq	gene	534516	534598	.	+	.	ID=gene500;Name=sroB;Dbxref=GeneID:7148099;gbkey=Gene;gene=sroB;locus_tag=EC55989_misc_RNA_14
NC_011748.1	RefSeq	transcript	534516	534598	.	+	.	ID=rna22;Parent=gene500;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 14602901%3B Product type n : RNA;Dbxref=GeneID:7148099;gbkey=misc_RNA;product=SroB
NC_011748.1	RefSeq	exon	534516	534598	.	+	.	ID=id40;Parent=rna22;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 14602901%3B Product type n : RNA;Dbxref=GeneID:7148099;gbkey=misc_RNA;product=SroB
NC_011748.1	RefSeq	gene	534597	535391	.	-	.	ID=gene501;Name=ybaP;Dbxref=GeneID:7147708;gbkey=Gene;gene=ybaP;locus_tag=EC55989_0495
NC_011748.1	RefSeq	CDS	534597	535391	.	-	0	ID=cds467;Name=YP_002401611.1;Parent=gene501;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002401611.1,GeneID:7147708;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401611.1;transl_table=11
NC_011748.1	RefSeq	gene	535529	535870	.	+	.	ID=gene502;Name=ybaQ;Dbxref=GeneID:7148104;gbkey=Gene;gene=ybaQ;locus_tag=EC55989_0496
NC_011748.1	RefSeq	CDS	535529	535870	.	+	0	ID=cds468;Name=YP_002401612.1;Parent=gene502;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pr :  regulator;Dbxref=Genbank:YP_002401612.1,GeneID:7148104;gbkey=CDS;product=DNA-binding transcriptional regulator;protein_id=YP_002401612.1;transl_table=11
NC_011748.1	RefSeq	gene	535984	538488	.	-	.	ID=gene503;Name=copA;Dbxref=GeneID:7148105;gbkey=Gene;gene=copA;locus_tag=EC55989_0497
NC_011748.1	RefSeq	CDS	535984	538488	.	-	0	ID=cds469;Name=YP_002401613.1;Parent=gene503;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 12351646%2C 20105527%2C 11167016%2C 11500054%2C 9868784%3B Product type t : transporter;Dbxref=Genbank:YP_002401613.1,GeneID:7148105;gbkey=CDS;product=copper exporting ATPase;protein_id=YP_002401613.1;transl_table=11
NC_011748.1	RefSeq	gene	538750	539682	.	+	.	ID=gene504;Name=ybaS;Dbxref=GeneID:7145742;gbkey=Gene;gene=ybaS;locus_tag=EC55989_0498
NC_011748.1	RefSeq	CDS	538750	539682	.	+	0	ID=cds470;Name=YP_002401614.1;Parent=gene504;Note=catalyzes the formation of glutamate from glutamine;Dbxref=Genbank:YP_002401614.1,GeneID:7145742;gbkey=CDS;product=glutaminase;protein_id=YP_002401614.1;transl_table=11
NC_011748.1	RefSeq	gene	539685	540977	.	+	.	ID=gene505;Name=ybaT;Dbxref=GeneID:7148106;gbkey=Gene;gene=ybaT;locus_tag=EC55989_0499
NC_011748.1	RefSeq	CDS	539685	540977	.	+	0	ID=cds471;Name=YP_002401615.1;Parent=gene505;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002401615.1,GeneID:7148106;gbkey=CDS;product=nitrogen-containing metabolite transporter;protein_id=YP_002401615.1;transl_table=11
NC_011748.1	RefSeq	gene	541102	541509	.	+	.	ID=gene506;Name=cueR;Dbxref=GeneID:7148107;gbkey=Gene;gene=cueR;locus_tag=EC55989_0500
NC_011748.1	RefSeq	CDS	541102	541509	.	+	0	ID=cds472;Name=YP_002401616.1;Parent=gene506;Note=activator of copper-responsive regulon genes;Dbxref=Genbank:YP_002401616.1,GeneID:7148107;gbkey=CDS;product=DNA-binding transcriptional regulator CueR;protein_id=YP_002401616.1;transl_table=11
NC_011748.1	RefSeq	gene	541510	541965	.	-	.	ID=gene507;Name=ybbJ;Dbxref=GeneID:7145789;gbkey=Gene;gene=ybbJ;locus_tag=EC55989_0501
NC_011748.1	RefSeq	CDS	541510	541965	.	-	0	ID=cds473;Name=YP_002401617.1;Parent=gene507;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002401617.1,GeneID:7145789;gbkey=CDS;product=inner membrane protein;protein_id=YP_002401617.1;transl_table=11
NC_011748.1	RefSeq	gene	541965	542882	.	-	.	ID=gene508;Name=ybbK;Dbxref=GeneID:7148115;gbkey=Gene;gene=ybbK;locus_tag=EC55989_0502
NC_011748.1	RefSeq	CDS	541965	542882	.	-	0	ID=cds474;Name=YP_002401618.1;Parent=gene508;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002401618.1,GeneID:7148115;gbkey=CDS;product=protease%2C membrane anchored;protein_id=YP_002401618.1;transl_table=11
NC_011748.1	RefSeq	gene	543028	543705	.	+	.	ID=gene509;Name=ybbL;Dbxref=GeneID:7148116;gbkey=Gene;gene=ybbL;locus_tag=EC55989_0503
NC_011748.1	RefSeq	CDS	543028	543705	.	+	0	ID=cds475;Name=YP_002401619.1;Parent=gene509;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002401619.1,GeneID:7148116;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=YP_002401619.1;transl_table=11
NC_011748.1	RefSeq	gene	543692	544471	.	+	.	ID=gene510;Name=ybbM;Dbxref=GeneID:7148117;gbkey=Gene;gene=ybbM;locus_tag=EC55989_0504
NC_011748.1	RefSeq	CDS	543692	544471	.	+	0	ID=cds476;Name=YP_002401620.1;Parent=gene510;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002401620.1,GeneID:7148117;gbkey=CDS;product=permease of an ABC transporter;protein_id=YP_002401620.1;transl_table=11
NC_011748.1	RefSeq	gene	544534	545388	.	-	.	ID=gene511;Name=ybbN;Dbxref=GeneID:7148118;gbkey=Gene;gene=ybbN;locus_tag=EC55989_0505
NC_011748.1	RefSeq	CDS	544534	545388	.	-	0	ID=cds477;Name=YP_002401621.1;Parent=gene511;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pc :  carrier;Dbxref=Genbank:YP_002401621.1,GeneID:7148118;gbkey=CDS;product=thioredoxin domain-containing protein;protein_id=YP_002401621.1;transl_table=11
NC_011748.1	RefSeq	gene	545449	546258	.	-	.	ID=gene512;Name=ybbO;Dbxref=GeneID:7148119;gbkey=Gene;gene=ybbO;locus_tag=EC55989_0506
NC_011748.1	RefSeq	CDS	545449	546258	.	-	0	ID=cds478;Name=YP_002401622.1;Parent=gene512;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002401622.1,GeneID:7148119;gbkey=CDS;product=short chain dehydrogenase;protein_id=YP_002401622.1;transl_table=11
NC_011748.1	RefSeq	gene	546248	546874	.	-	.	ID=gene513;Name=tesA;Dbxref=GeneID:7148120;gbkey=Gene;gene=tesA;locus_tag=EC55989_0507
NC_011748.1	RefSeq	CDS	546248	546874	.	-	0	ID=cds479;Name=YP_002401623.1;Parent=gene513;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 91270121%2C 91324311%2C 93163029%2C 93252782%2C 94179121%2C 99353977%2C 1864840%2C 8432696%2C 8098033%3B Product type e : enzyme;Dbxref=Genbank:YP_002401623.1,GeneID:7148120;gbkey=CDS;product=multifunctional acyl-CoA thioesterase I%2Fprotease I%2Flysophospholipase L1;protein_id=YP_002401623.1;transl_table=11
NC_011748.1	RefSeq	STS	546335	546560	.	+	.	ID=id41;Dbxref=UniSTS:47999;gbkey=STS
NC_011748.1	RefSeq	gene	546842	547528	.	+	.	ID=gene514;Name=ybbA;Dbxref=GeneID:7147775;gbkey=Gene;gene=ybbA;locus_tag=EC55989_0508
NC_011748.1	RefSeq	CDS	546842	547528	.	+	0	ID=cds480;Name=YP_002401624.1;Parent=gene514;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002401624.1,GeneID:7147775;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=YP_002401624.1;transl_table=11
NC_011748.1	RefSeq	gene	547525	549939	.	+	.	ID=gene515;Name=ybbP;Dbxref=GeneID:7148112;gbkey=Gene;gene=ybbP;locus_tag=EC55989_0509
NC_011748.1	RefSeq	CDS	547525	549939	.	+	0	ID=cds481;Name=YP_002401625.1;Parent=gene515;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type t : transporter;Dbxref=Genbank:YP_002401625.1,GeneID:7148112;gbkey=CDS;product=ABC transporter permease;protein_id=YP_002401625.1;transl_table=11
NC_011748.1	RefSeq	gene	550369	554637	.	+	.	ID=gene516;Name=rhsD;Dbxref=GeneID:7148121;gbkey=Gene;gene=rhsD;locus_tag=EC55989_0510
NC_011748.1	RefSeq	CDS	550369	554637	.	+	0	ID=cds482;Name=YP_002401626.1;Parent=gene516;Note=Evidence 2b : Function of strongly homologous gene%3B PubMedId : 98361897%2C 1766878%2C 2403547%2C 2644231%2C 7934896%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002401626.1,GeneID:7148121;gbkey=CDS;product=rhsD element protein;protein_id=YP_002401626.1;transl_table=11
NC_011748.1	RefSeq	gene	554671	554946	.	+	.	ID=gene517;Name=insA;Dbxref=GeneID:7147403;gbkey=Gene;gene=insA;locus_tag=EC55989_0511
NC_011748.1	RefSeq	CDS	554671	554946	.	+	0	ID=cds483;Name=YP_002401627.1;Parent=gene517;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 9689094%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002401627.1,GeneID:7147403;gbkey=CDS;product=IS1 repressor protein InsA;protein_id=YP_002401627.1;transl_table=11
NC_011748.1	RefSeq	gene	554865	555368	.	+	.	ID=gene518;Name=insB;Dbxref=GeneID:7146569;gbkey=Gene;gene=insB;locus_tag=EC55989_0512
NC_011748.1	RefSeq	CDS	554865	555368	.	+	0	ID=cds484;Name=YP_002401628.1;Parent=gene518;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 9689094%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002401628.1,GeneID:7146569;gbkey=CDS;product=IS1 transposase InsAB%27;protein_id=YP_002401628.1;transl_table=11
NC_011748.1	RefSeq	gene	555475	555843	.	+	.	ID=gene519;Name=ybbC;Dbxref=GeneID:7146581;gbkey=Gene;gene=ybbC;locus_tag=EC55989_0513
NC_011748.1	RefSeq	CDS	555475	555843	.	+	0	ID=cds485;Name=YP_002401629.1;Parent=gene519;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002401629.1,GeneID:7146581;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401629.1;transl_table=11
NC_011748.1	RefSeq	gene	555843	556553	.	+	.	ID=gene520;Name=ylbH;Dbxref=GeneID:7148114;gbkey=Gene;gene=ylbH;locus_tag=EC55989_0514
NC_011748.1	RefSeq	CDS	555843	556553	.	+	0	ID=cds486;Name=YP_002401630.1;Parent=gene520;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 1766878%2C 7934896%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002401630.1,GeneID:7148114;gbkey=CDS;product=rhs-like;protein_id=YP_002401630.1;transl_table=11
NC_011748.1	RefSeq	gene	556534	557025	.	+	.	ID=gene521;Name=EC55989_0515;Dbxref=GeneID:7149251;gbkey=Gene;locus_tag=EC55989_0515
NC_011748.1	RefSeq	CDS	556534	557025	.	+	0	ID=cds487;Name=YP_002401631.1;Parent=gene521;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002401631.1,GeneID:7149251;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401631.1;transl_table=11
NC_011748.1	RefSeq	gene	557310	557525	.	-	.	ID=gene522;Name=EC55989_0516;Dbxref=GeneID:7144427;gbkey=Gene;locus_tag=EC55989_0516
NC_011748.1	RefSeq	CDS	557310	557525	.	-	0	ID=cds488;Name=YP_002401632.1;Parent=gene522;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002401632.1,GeneID:7144427;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401632.1;transl_table=11
NC_011748.1	RefSeq	gene	557512	557946	.	-	.	ID=gene523;Name=EC55989_0517;Dbxref=GeneID:7144428;gbkey=Gene;locus_tag=EC55989_0517
NC_011748.1	RefSeq	CDS	557512	557946	.	-	0	ID=cds489;Name=YP_002401633.1;Parent=gene523;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pr :  regulator;Dbxref=Genbank:YP_002401633.1,GeneID:7144428;gbkey=CDS;product=regulator with homeodomain-like DNA binding domain;protein_id=YP_002401633.1;transl_table=11
NC_011748.1	RefSeq	gene	558026	559120	.	-	.	ID=gene524;Name=ybbB;Dbxref=GeneID:7144429;gbkey=Gene;gene=ybbB;locus_tag=EC55989_0518
NC_011748.1	RefSeq	CDS	558026	559120	.	-	0	ID=cds490;Name=YP_002401634.1;Parent=gene524;Note=catalyzes the selenophosphate-dependent transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA;Dbxref=Genbank:YP_002401634.1,GeneID:7144429;gbkey=CDS;product=tRNA 2-selenouridine synthase;protein_id=YP_002401634.1;transl_table=11
NC_011748.1	RefSeq	gene	559189	560115	.	-	.	ID=gene525;Name=ybbS;Dbxref=GeneID:7148113;gbkey=Gene;gene=ybbS;locus_tag=EC55989_0519
NC_011748.1	RefSeq	CDS	559189	560115	.	-	0	ID=cds491;Name=YP_002401635.1;Parent=gene525;Note=activator of the allDC-ylbA operon involved in allantoin utilization;Dbxref=Genbank:YP_002401635.1,GeneID:7148113;gbkey=CDS;product=DNA-binding transcriptional activator AllS;protein_id=YP_002401635.1;transl_table=11
NC_011748.1	RefSeq	gene	560345	560827	.	+	.	ID=gene526;Name=allA;Dbxref=GeneID:7148122;gbkey=Gene;gene=allA;locus_tag=EC55989_0520
NC_011748.1	RefSeq	CDS	560345	560827	.	+	0	ID=cds492;Name=YP_002401636.1;Parent=gene526;Note=catalyzes the formation of glyoxylate from %28S%29-ureidoglycolate;Dbxref=Genbank:YP_002401636.1,GeneID:7148122;gbkey=CDS;product=ureidoglycolate hydrolase;protein_id=YP_002401636.1;transl_table=11
NC_011748.1	RefSeq	gene	560905	561720	.	+	.	ID=gene527;Name=allR;Dbxref=GeneID:7145483;gbkey=Gene;gene=allR;locus_tag=EC55989_0521
NC_011748.1	RefSeq	CDS	560905	561720	.	+	0	ID=cds493;Name=YP_002401637.1;Parent=gene527;Note=regulates operons involved in the utilization of allantoin;Dbxref=Genbank:YP_002401637.1,GeneID:7145483;gbkey=CDS;product=DNA-binding transcriptional repressor AllR;protein_id=YP_002401637.1;transl_table=11
NC_011748.1	RefSeq	gene	561810	563591	.	+	.	ID=gene528;Name=gcl;Dbxref=GeneID:7145487;gbkey=Gene;gene=gcl;locus_tag=EC55989_0522
NC_011748.1	RefSeq	CDS	561810	563591	.	+	0	ID=cds494;Name=YP_002401638.1;Parent=gene528;Note=catalyzes the formation of 2-hydroxy-3-oxopropanoate %28tartronate semialdehyde%29 from two molecules of glyoxylate;Dbxref=Genbank:YP_002401638.1,GeneID:7145487;gbkey=CDS;product=glyoxylate carboligase;protein_id=YP_002401638.1;transl_table=11
NC_011748.1	RefSeq	gene	563604	564380	.	+	.	ID=gene529;Name=hyi;Dbxref=GeneID:7146272;gbkey=Gene;gene=hyi;locus_tag=EC55989_0523
NC_011748.1	RefSeq	CDS	563604	564380	.	+	0	ID=cds495;Name=YP_002401639.1;Parent=gene529;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 20029625%2C 8440684%3B Product type e : enzyme;Dbxref=Genbank:YP_002401639.1,GeneID:7146272;gbkey=CDS;product=hydroxypyruvate isomerase;protein_id=YP_002401639.1;transl_table=11
NC_011748.1	RefSeq	gene	564480	565358	.	+	.	ID=gene530;Name=glxR;Dbxref=GeneID:7146519;gbkey=Gene;gene=glxR;locus_tag=EC55989_0524
NC_011748.1	RefSeq	CDS	564480	565358	.	+	0	ID=cds496;Name=YP_002401640.1;Parent=gene530;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 20069628%3B Product type e : enzyme;Dbxref=Genbank:YP_002401640.1,GeneID:7146519;gbkey=CDS;product=tartronate semialdehyde reductase%2C NADH-dependent;protein_id=YP_002401640.1;transl_table=11
NC_011748.1	RefSeq	gene	565527	566981	.	+	.	ID=gene531;Name=ybbW;Dbxref=GeneID:7146338;gbkey=Gene;gene=ybbW;locus_tag=EC55989_0525
NC_011748.1	RefSeq	CDS	565527	566981	.	+	0	ID=cds497;Name=YP_002401641.1;Parent=gene531;Note=Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism%3B PubMedId : 1293888%3B Product type t : transporter;Dbxref=Genbank:YP_002401641.1,GeneID:7146338;gbkey=CDS;product=allantoin permease;protein_id=YP_002401641.1;transl_table=11
NC_011748.1	RefSeq	gene	567041	568402	.	+	.	ID=gene532;Name=allB;Dbxref=GeneID:7148123;gbkey=Gene;gene=allB;locus_tag=EC55989_0526
NC_011748.1	RefSeq	CDS	567041	568402	.	+	0	ID=cds498;Name=YP_002401642.1;Parent=gene532;Note=Plays a crucial role on both purine and pyrimidine metabolism;Dbxref=Genbank:YP_002401642.1,GeneID:7148123;gbkey=CDS;product=allantoinase;protein_id=YP_002401642.1;transl_table=11
NC_011748.1	RefSeq	gene	568459	569760	.	+	.	ID=gene533;Name=ybbY;Dbxref=GeneID:7145484;gbkey=Gene;gene=ybbY;locus_tag=EC55989_0527
NC_011748.1	RefSeq	CDS	568459	569760	.	+	0	ID=cds499;Name=YP_002401643.1;Parent=gene533;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002401643.1,GeneID:7145484;gbkey=CDS;product=purine permease YbbY;protein_id=YP_002401643.1;transl_table=11
NC_011748.1	RefSeq	gene	569782	570927	.	+	.	ID=gene534;Name=glxK;Dbxref=GeneID:7148124;gbkey=Gene;gene=glxK;locus_tag=EC55989_0528
NC_011748.1	RefSeq	CDS	569782	570927	.	+	0	ID=cds500;Name=YP_002401644.1;Parent=gene534;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 20069628%3B Product type e : enzyme;Dbxref=Genbank:YP_002401644.1,GeneID:7148124;gbkey=CDS;product=glycerate kinase;protein_id=YP_002401644.1;transl_table=11
NC_011748.1	RefSeq	gene	571056	571841	.	-	.	ID=gene535;Name=ylbA;Dbxref=GeneID:7146337;gbkey=Gene;gene=ylbA;locus_tag=EC55989_0529
NC_011748.1	RefSeq	CDS	571056	571841	.	-	0	ID=cds501;Name=YP_002401645.1;Parent=gene535;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002401645.1,GeneID:7146337;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401645.1;transl_table=11
NC_011748.1	RefSeq	gene	571852	573087	.	-	.	ID=gene536;Name=allC;Dbxref=GeneID:7149248;gbkey=Gene;gene=allC;locus_tag=EC55989_0530
NC_011748.1	RefSeq	CDS	571852	573087	.	-	0	ID=cds502;Name=YP_002401646.1;Parent=gene536;Note=allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar%3B the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to %28S%29-ureidoglycolate and ammonia%3B carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids%2C ammonia%2C and carbon dioxide;Dbxref=Genbank:YP_002401646.1,GeneID:7149248;gbkey=CDS;product=allantoate amidohydrolase;protein_id=YP_002401646.1;transl_table=11
NC_011748.1	RefSeq	gene	573109	574158	.	-	.	ID=gene537;Name=allD;Dbxref=GeneID:7145485;gbkey=Gene;gene=allD;locus_tag=EC55989_0531
NC_011748.1	RefSeq	CDS	573109	574158	.	-	0	ID=cds503;Name=YP_002401647.1;Parent=gene537;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 12460564%2C 20069628%2C 69151449%3B Product type e : enzyme;Dbxref=Genbank:YP_002401647.1,GeneID:7145485;gbkey=CDS;product=ureidoglycolate dehydrogenase;protein_id=YP_002401647.1;transl_table=11
NC_011748.1	RefSeq	gene	574475	576142	.	+	.	ID=gene538;Name=fdrA;Dbxref=GeneID:7145486;gbkey=Gene;gene=fdrA;locus_tag=EC55989_0532
NC_011748.1	RefSeq	CDS	574475	576142	.	+	0	ID=cds504;Name=YP_002401648.1;Parent=gene538;Note=multicopy suppressor of dominant negative ftsH mutations;Dbxref=Genbank:YP_002401648.1,GeneID:7145486;gbkey=CDS;product=membrane protein FdrA;protein_id=YP_002401648.1;transl_table=11
NC_011748.1	RefSeq	gene	576152	577411	.	+	.	ID=gene539;Name=ylbE;Dbxref=GeneID:7146075;gbkey=Gene;gene=ylbE;locus_tag=EC55989_0533
NC_011748.1	RefSeq	CDS	576152	577411	.	+	0	ID=cds505;Name=YP_002401649.1;Parent=gene539;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002401649.1,GeneID:7146075;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401649.1;transl_table=11
NC_011748.1	RefSeq	gene	577422	578237	.	+	.	ID=gene540;Name=ylbF;Dbxref=GeneID:7149249;gbkey=Gene;gene=ylbF;locus_tag=EC55989_0534
NC_011748.1	RefSeq	CDS	577422	578237	.	+	0	ID=cds506;Name=YP_002401650.1;Parent=gene540;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002401650.1,GeneID:7149249;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401650.1;transl_table=11
NC_011748.1	RefSeq	gene	578234	579127	.	+	.	ID=gene541;Name=ybcF;Dbxref=GeneID:7149250;gbkey=Gene;gene=ybcF;locus_tag=EC55989_0535
NC_011748.1	RefSeq	CDS	578234	579127	.	+	0	ID=cds507;Name=YP_002401651.1;Parent=gene541;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 2464576%2C 2644189%2C 7920643%2C 7940673%2C 7984428%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002401651.1,GeneID:7149250;gbkey=CDS;product=carbamate kinase;protein_id=YP_002401651.1;transl_table=11
NC_011748.1	RefSeq	gene	579322	580389	.	-	.	ID=gene542;Name=purK;Dbxref=GeneID:7148125;gbkey=Gene;gene=purK;locus_tag=EC55989_0536
NC_011748.1	RefSeq	CDS	579322	580389	.	-	0	ID=cds508;Name=YP_002401652.1;Parent=gene542;Note=With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway;Dbxref=Genbank:YP_002401652.1,GeneID:7148125;gbkey=CDS;product=phosphoribosylaminoimidazole carboxylase ATPase subunit;protein_id=YP_002401652.1;transl_table=11
NC_011748.1	RefSeq	gene	580386	580895	.	-	.	ID=gene543;Name=purE;Dbxref=GeneID:7147299;gbkey=Gene;gene=purE;locus_tag=EC55989_0537
NC_011748.1	RefSeq	CDS	580386	580895	.	-	0	ID=cds509;Name=YP_002401653.1;Parent=gene543;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 10074353%2C 8117684%2C 89123018%2C 89123019%2C 92287929%2C 10574791%3B Product type e : enzyme;Dbxref=Genbank:YP_002401653.1,GeneID:7147299;gbkey=CDS;product=N5-carboxyaminoimidazole ribonucleotide mutase;protein_id=YP_002401653.1;transl_table=11
NC_011748.1	RefSeq	gene	581013	581735	.	-	.	ID=gene544;Name=lpxH;Dbxref=GeneID:7147296;gbkey=Gene;gene=lpxH;locus_tag=EC55989_0538
NC_011748.1	RefSeq	CDS	581013	581735	.	-	0	ID=cds510;Name=YP_002401654.1;Parent=gene544;Note=catalyzes the formation of 2%2C3%3Ddiacylglucosamine 1-phosphate from UDP-2%2C3%3Ddiacylglucosamine;Dbxref=Genbank:YP_002401654.1,GeneID:7147296;gbkey=CDS;product=UDP-2%2C3-diacylglucosamine hydrolase;protein_id=YP_002401654.1;transl_table=11
NC_011748.1	RefSeq	gene	581738	582232	.	-	.	ID=gene545;Name=ppiB;Dbxref=GeneID:7146739;gbkey=Gene;gene=ppiB;locus_tag=EC55989_0539
NC_011748.1	RefSeq	CDS	581738	582232	.	-	0	ID=cds511;Name=YP_002401655.1;Parent=gene545;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 90272647%2C 91175755%2C 1606970%2C 1864365%2C 8601841%2C 9298646%2C 9600841%3B Product type e : enzyme;Dbxref=Genbank:YP_002401655.1,GeneID:7146739;gbkey=CDS;product=peptidyl-prolyl cis-trans isomerase B;protein_id=YP_002401655.1;transl_table=11
NC_011748.1	RefSeq	gene	582406	583791	.	+	.	ID=gene546;Name=cysS;Dbxref=GeneID:7147229;gbkey=Gene;gene=cysS;locus_tag=EC55989_0540
NC_011748.1	RefSeq	CDS	582406	583791	.	+	0	ID=cds512;Name=YP_002401656.1;Parent=gene546;Note=catalyzes a two-step reaction%3B charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA;Dbxref=Genbank:YP_002401656.1,GeneID:7147229;gbkey=CDS;product=cysteinyl-tRNA synthetase;protein_id=YP_002401656.1;transl_table=11
NC_011748.1	RefSeq	gene	583827	584348	.	-	.	ID=gene547;Name=ybcI;Dbxref=GeneID:7145834;gbkey=Gene;gene=ybcI;locus_tag=EC55989_0541
NC_011748.1	RefSeq	CDS	583827	584348	.	-	0	ID=cds513;Name=YP_002401657.1;Parent=gene547;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002401657.1,GeneID:7145834;gbkey=CDS;product=inner membrane protein;protein_id=YP_002401657.1;transl_table=11
NC_011748.1	RefSeq	gene	584456	584668	.	-	.	ID=gene548;Name=ybcJ;Dbxref=GeneID:7148127;gbkey=Gene;gene=ybcJ;locus_tag=EC55989_0542
NC_011748.1	RefSeq	CDS	584456	584668	.	-	0	ID=cds514;Name=YP_002401658.1;Parent=gene548;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 12837795%2C 1748668%2C 7567469%3B Product type pr :  regulator;Dbxref=Genbank:YP_002401658.1,GeneID:7148127;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401658.1;transl_table=11
NC_011748.1	RefSeq	gene	584670	585536	.	-	.	ID=gene549;Name=folD;Dbxref=GeneID:7148128;gbkey=Gene;gene=folD;locus_tag=EC55989_0543
NC_011748.1	RefSeq	CDS	584670	585536	.	-	0	ID=cds515;Name=YP_002401659.1;Parent=gene549;Note=catalyzes the formation of 5%2C10-methenyltetrahydrofolate from 5%2C10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5%2C10-methenyltetrahydrofolate;Dbxref=Genbank:YP_002401659.1,GeneID:7148128;gbkey=CDS;product=bifunctional 5%2C10-methylene-tetrahydrofolate dehydrogenase%2F 5%2C10-methylene-tetrahydrofolate cyclohydrolase;protein_id=YP_002401659.1;transl_table=11
NC_011748.1	RefSeq	gene	586017	586559	.	+	.	ID=gene550;Name=sfmA;Dbxref=GeneID:7146171;gbkey=Gene;gene=sfmA;locus_tag=EC55989_0544
NC_011748.1	RefSeq	CDS	586017	586559	.	+	0	ID=cds516;Name=YP_002401660.1;Parent=gene550;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 2890624%3B Product type ps :  structure;Dbxref=Genbank:YP_002401660.1,GeneID:7146171;gbkey=CDS;product=fimbrial-like adhesin protein;protein_id=YP_002401660.1;transl_table=11
NC_011748.1	RefSeq	gene	586779	587471	.	+	.	ID=gene551;Name=sfmC;Dbxref=GeneID:7147640;gbkey=Gene;gene=sfmC;locus_tag=EC55989_0545
NC_011748.1	RefSeq	CDS	586779	587471	.	+	0	ID=cds517;Name=YP_002401661.1;Parent=gene551;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 15372038%2C 2553674%3B Product type f : factor;Dbxref=Genbank:YP_002401661.1,GeneID:7147640;gbkey=CDS;product=pilin chaperone%2C periplasmic;protein_id=YP_002401661.1;transl_table=11
NC_011748.1	RefSeq	gene	587502	590111	.	+	.	ID=gene552;Name=sfmD;Dbxref=GeneID:7147641;gbkey=Gene;gene=sfmD;locus_tag=EC55989_0546
NC_011748.1	RefSeq	CDS	587502	590111	.	+	0	ID=cds518;Name=YP_002401662.1;Parent=gene552;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 1970114%3B Product type pf :  factor;Dbxref=Genbank:YP_002401662.1,GeneID:7147641;gbkey=CDS;product=outer membrane export usher protein;protein_id=YP_002401662.1;transl_table=11
NC_011748.1	RefSeq	STS	589906	590055	.	+	.	ID=id42;Dbxref=UniSTS:94982,GeneID:7147641;gbkey=STS
NC_011748.1	RefSeq	gene	590154	591131	.	+	.	ID=gene553;Name=sfmH;Dbxref=GeneID:7147642;gbkey=Gene;gene=sfmH;locus_tag=EC55989_0547
NC_011748.1	RefSeq	CDS	590154	591131	.	+	0	ID=cds519;Name=YP_002401663.1;Parent=gene553;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type ps :  structure;Dbxref=Genbank:YP_002401663.1,GeneID:7147642;gbkey=CDS;product=fimbrial-like adhesin protein;protein_id=YP_002401663.1;transl_table=11
NC_011748.1	RefSeq	gene	591142	591657	.	+	.	ID=gene554;Name=sfmF;Dbxref=GeneID:7147644;gbkey=Gene;gene=sfmF;locus_tag=EC55989_0548
NC_011748.1	RefSeq	CDS	591142	591657	.	+	0	ID=cds520;Name=YP_002401664.1;Parent=gene554;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 2890624%3B Product type ps :  structure;Dbxref=Genbank:YP_002401664.1,GeneID:7147644;gbkey=CDS;product=fimbrial protein;protein_id=YP_002401664.1;transl_table=11
NC_011748.1	RefSeq	gene	591660	592292	.	-	.	ID=gene555;Name=fimZ;Dbxref=GeneID:7147643;gbkey=Gene;gene=fimZ;locus_tag=EC55989_0549
NC_011748.1	RefSeq	CDS	591660	592292	.	-	0	ID=cds521;Name=YP_002401665.1;Parent=gene555;Note=activates the production of the major fimbrae protein FimA;Dbxref=Genbank:YP_002401665.1,GeneID:7147643;gbkey=CDS;product=transcriptional regulator FimZ;protein_id=YP_002401665.1;transl_table=11
NC_011748.1	RefSeq	gene	592535	592611	.	+	.	ID=gene556;Name=EC55989_tRNA7;Dbxref=GeneID:7146112;gbkey=Gene;locus_tag=EC55989_tRNA7
NC_011748.1	RefSeq	tRNA	592535	592611	.	+	.	ID=rna23;Dbxref=GeneID:7146112;gbkey=tRNA;product=tRNA-Arg
NC_011748.1	RefSeq	exon	592535	592611	.	+	.	ID=id43;Parent=rna23;Dbxref=GeneID:7146112;gbkey=tRNA;product=tRNA-Arg
NC_011748.1	RefSeq	gene	592541	592663	.	-	.	ID=gene557;Name=EC55989_0550;Dbxref=GeneID:7145383;gbkey=Gene;locus_tag=EC55989_0550
NC_011748.1	RefSeq	CDS	592541	592663	.	-	0	ID=cds522;Name=YP_002401666.1;Parent=gene557;Note=Evidence 6 : Doubtful CDS;Dbxref=Genbank:YP_002401666.1,GeneID:7145383;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401666.1;transl_table=11
NC_011748.1	RefSeq	gene	592657	593418	.	-	.	ID=gene558;Name=envY;Dbxref=GeneID:7144430;gbkey=Gene;gene=envY;locus_tag=EC55989_0551
NC_011748.1	RefSeq	CDS	592657	593418	.	-	0	ID=cds523;Name=YP_002401667.1;Parent=gene558;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 6317653%2C 2536924%3B Product type r : regulator;Dbxref=Genbank:YP_002401667.1,GeneID:7144430;gbkey=CDS;product=DNA-binding transcriptional activator of porin biosynthesis;protein_id=YP_002401667.1;transl_table=11
NC_011748.1	RefSeq	gene	593601	594491	.	-	.	ID=gene559;Name=ybcH;Dbxref=GeneID:7146007;gbkey=Gene;gene=ybcH;locus_tag=EC55989_0552
NC_011748.1	RefSeq	CDS	593601	594491	.	-	0	ID=cds524;Name=YP_002401668.1;Parent=gene559;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002401668.1,GeneID:7146007;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401668.1;transl_table=11
NC_011748.1	RefSeq	gene	594492	597464	.	-	.	ID=gene560;Name=nfrA;Dbxref=GeneID:7148126;gbkey=Gene;gene=nfrA;locus_tag=EC55989_0553
NC_011748.1	RefSeq	CDS	594492	597464	.	-	0	ID=cds525;Name=YP_002401669.1;Parent=gene560;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 89359086%2C 94042873%2C 94042874%3B Product type m : membrane component;Dbxref=Genbank:YP_002401669.1,GeneID:7148126;gbkey=CDS;product=bacteriophage N4 receptor%2C outer membrane subunit;protein_id=YP_002401669.1;transl_table=11
NC_011748.1	RefSeq	gene	597451	599688	.	-	.	ID=gene561;Name=nfrB;Dbxref=GeneID:7146988;gbkey=Gene;gene=nfrB;locus_tag=EC55989_0554
NC_011748.1	RefSeq	CDS	597451	599688	.	-	0	ID=cds526;Name=YP_002401670.1;Parent=gene561;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 89359086%2C 94042873%2C 94042874%3B Product type m : membrane component;Dbxref=Genbank:YP_002401670.1,GeneID:7146988;gbkey=CDS;product=bacteriophage N4 adsorption protein B;protein_id=YP_002401670.1;transl_table=11
NC_011748.1	RefSeq	gene	599957	601093	.	-	.	ID=gene562;Name=yhhI;Dbxref=GeneID:7146989;gbkey=Gene;gene=yhhI;locus_tag=EC55989_0555
NC_011748.1	RefSeq	CDS	599957	601093	.	-	0	ID=cds527;Name=YP_002401671.1;Parent=gene562;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type ph : phenotype;Dbxref=Genbank:YP_002401671.1,GeneID:7146989;gbkey=CDS;product=transposase;protein_id=YP_002401671.1;transl_table=11
NC_011748.1	RefSeq	gene	601197	601508	.	-	.	ID=gene563;Name=EC55989_0556;Dbxref=GeneID:7148980;gbkey=Gene;locus_tag=EC55989_0556
NC_011748.1	RefSeq	CDS	601197	601508	.	-	0	ID=cds528;Name=YP_002401672.1;Parent=gene563;Note=Evidence 5 : No homology to any previously reported sequences;Dbxref=Genbank:YP_002401672.1,GeneID:7148980;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401672.1;transl_table=11
NC_011748.1	RefSeq	gene	601623	601874	.	-	.	ID=gene564;Name=EC55989_0557;Dbxref=GeneID:7144431;gbkey=Gene;locus_tag=EC55989_0557
NC_011748.1	RefSeq	CDS	601623	601874	.	-	0	ID=cds529;Name=YP_002401673.1;Parent=gene564;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002401673.1,GeneID:7144431;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401673.1;transl_table=11
NC_011748.1	RefSeq	gene	601871	606733	.	-	.	ID=gene565;Name=EC55989_0558;Dbxref=GeneID:7144432;gbkey=Gene;locus_tag=EC55989_0558
NC_011748.1	RefSeq	CDS	601871	606733	.	-	0	ID=cds530;Name=YP_002401674.1;Parent=gene565;Note=Evidence 2b : Function of strongly homologous gene%3B PubMedId : 1766878%2C 2644231%2C 2403547%2C 7934896;Dbxref=Genbank:YP_002401674.1,GeneID:7144432;gbkey=CDS;product=Rhs core protein with extension;protein_id=YP_002401674.1;transl_table=11
NC_011748.1	RefSeq	gene	606753	607214	.	-	.	ID=gene566;Name=EC55989_0559;Dbxref=GeneID:7144433;gbkey=Gene;locus_tag=EC55989_0559
NC_011748.1	RefSeq	CDS	606753	607214	.	-	0	ID=cds531;Name=YP_002401675.1;Parent=gene566;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002401675.1,GeneID:7144433;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401675.1;transl_table=11
NC_011748.1	RefSeq	gene	607242	609143	.	-	.	ID=gene567;Name=EC55989_0560;Dbxref=GeneID:7144434;gbkey=Gene;locus_tag=EC55989_0560
NC_011748.1	RefSeq	CDS	607242	609143	.	-	0	ID=cds532;Name=YP_002401676.1;Parent=gene567;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 9696756%2C 8557353;Dbxref=Genbank:YP_002401676.1,GeneID:7144434;gbkey=CDS;product=Rhs element Vgr protein;protein_id=YP_002401676.1;transl_table=11
NC_011748.1	RefSeq	gene	609880	611340	.	-	.	ID=gene568;Name=cusS;Dbxref=GeneID:7144435;gbkey=Gene;gene=cusS;locus_tag=EC55989_0561
NC_011748.1	RefSeq	CDS	609880	611340	.	-	0	ID=cds533;Name=YP_002401677.1;Parent=gene568;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 20461235%2C 11283292%2C 11399769%3B Product type r : regulator;Dbxref=Genbank:YP_002401677.1,GeneID:7144435;gbkey=CDS;product=sensor kinase CusS;protein_id=YP_002401677.1;transl_table=11
NC_011748.1	RefSeq	gene	611318	612001	.	-	.	ID=gene569;Name=cusR;Dbxref=GeneID:7145797;gbkey=Gene;gene=cusR;locus_tag=EC55989_0562
NC_011748.1	RefSeq	CDS	611318	612001	.	-	0	ID=cds534;Name=YP_002401678.1;Parent=gene569;Note=response regulator in two-component regulatory system with CusS%3B regulates the copper efflux system;Dbxref=Genbank:YP_002401678.1,GeneID:7145797;gbkey=CDS;product=DNA-binding transcriptional activator CusR;protein_id=YP_002401678.1;transl_table=11
NC_011748.1	RefSeq	gene	612158	613540	.	+	.	ID=gene570;Name=cusC;Dbxref=GeneID:7145795;gbkey=Gene;gene=cusC;locus_tag=EC55989_0563
NC_011748.1	RefSeq	CDS	612158	613540	.	+	0	ID=cds535;Name=YP_002401679.1;Parent=gene570;Note=with CusA%2C CusB and CusF is part of a cation efflux system that mediates resistance to copper and silver;Dbxref=Genbank:YP_002401679.1,GeneID:7145795;gbkey=CDS;product=copper%2Fsilver efflux system outer membrane protein CusC;protein_id=YP_002401679.1;transl_table=11
NC_011748.1	RefSeq	gene	613564	613896	.	+	.	ID=gene571;Name=cusF;Dbxref=GeneID:7145793;gbkey=Gene;gene=cusF;locus_tag=EC55989_0564
NC_011748.1	RefSeq	CDS	613564	613896	.	+	0	ID=cds536;Name=YP_002401680.1;Parent=gene571;Note=Evidence 2b : Function of strongly homologous gene%3B PubMedId : 21125583%2C 11283292%2C 11399769%2C 12813074%3B Product type f : factor;Dbxref=Genbank:YP_002401680.1,GeneID:7145793;gbkey=CDS;product=copper-binding protein;protein_id=YP_002401680.1;transl_table=11
NC_011748.1	RefSeq	gene	613912	615135	.	+	.	ID=gene572;Name=cusB;Dbxref=GeneID:7145794;gbkey=Gene;gene=cusB;locus_tag=EC55989_0565
NC_011748.1	RefSeq	CDS	613912	615135	.	+	0	ID=cds537;Name=YP_002401681.1;Parent=gene572;Note=with CusA%2C CusC and CusF is part of a cation efflux system that mediates resistance to copper and silver;Dbxref=Genbank:YP_002401681.1,GeneID:7145794;gbkey=CDS;product=copper%2Fsilver efflux system membrane fusion protein CusB;protein_id=YP_002401681.1;transl_table=11
NC_011748.1	RefSeq	gene	615147	618290	.	+	.	ID=gene573;Name=cusA;Dbxref=GeneID:7145792;gbkey=Gene;gene=cusA;locus_tag=EC55989_0566
NC_011748.1	RefSeq	CDS	615147	618290	.	+	0	ID=cds538;Name=YP_002401682.1;Parent=gene573;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 20461235%2C 21125583%2C 21178899%2C 21450803%2C 11399769%2C 12813074%2C 1711024%2C 7984428%3B Product type t : transporter;Dbxref=Genbank:YP_002401682.1,GeneID:7145792;gbkey=CDS;product=copper%2Fsilver efflux system%2C membrane component;protein_id=YP_002401682.1;transl_table=11
NC_011748.1	RefSeq	gene	618392	619768	.	+	.	ID=gene574;Name=pheP;Dbxref=GeneID:7145790;gbkey=Gene;gene=pheP;locus_tag=EC55989_0567
NC_011748.1	RefSeq	CDS	618392	619768	.	+	0	ID=cds539;Name=YP_002401683.1;Parent=gene574;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 91267923%2C 94042931%2C 8626334%3B Product type t : transporter;Dbxref=Genbank:YP_002401683.1,GeneID:7145790;gbkey=CDS;product=phenylalanine transporter;protein_id=YP_002401683.1;transl_table=11
NC_011748.1	RefSeq	gene	619836	621083	.	-	.	ID=gene575;Name=ybdG;Dbxref=GeneID:7147160;gbkey=Gene;gene=ybdG;locus_tag=EC55989_0568
NC_011748.1	RefSeq	CDS	619836	621083	.	-	0	ID=cds540;Name=YP_002401684.1;Parent=gene575;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002401684.1,GeneID:7147160;gbkey=CDS;product=membrane protein%3B channel;protein_id=YP_002401684.1;transl_table=11
NC_011748.1	RefSeq	gene	621191	621844	.	-	.	ID=gene576;Name=nfnB;Dbxref=GeneID:7148142;gbkey=Gene;gene=nfnB;locus_tag=EC55989_0569
NC_011748.1	RefSeq	CDS	621191	621844	.	-	0	ID=cds541;Name=YP_002401685.1;Parent=gene576;Note=catalyzes the reduction of nitroaromatic compounds such as nitrofurazone%2C quinones and the anti-tumor agent CB1954%3B NAD%28P%29H-dependent%3B oxygen insensitive;Dbxref=Genbank:YP_002401685.1,GeneID:7148142;gbkey=CDS;product=dihydropteridine reductase;protein_id=YP_002401685.1;transl_table=11
NC_011748.1	RefSeq	gene	621938	622306	.	-	.	ID=gene577;Name=ybdF;Dbxref=GeneID:7146986;gbkey=Gene;gene=ybdF;locus_tag=EC55989_0570
NC_011748.1	RefSeq	CDS	621938	622306	.	-	0	ID=cds542;Name=YP_002401686.1;Parent=gene577;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002401686.1,GeneID:7146986;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401686.1;transl_table=11
NC_011748.1	RefSeq	gene	622371	622619	.	-	.	ID=gene578;Name=ybdJ;Dbxref=GeneID:7148141;gbkey=Gene;gene=ybdJ;locus_tag=EC55989_0571
NC_011748.1	RefSeq	CDS	622371	622619	.	-	0	ID=cds543;Name=YP_002401687.1;Parent=gene578;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002401687.1,GeneID:7148141;gbkey=CDS;product=inner membrane protein;protein_id=YP_002401687.1;transl_table=11
NC_011748.1	RefSeq	gene	622685	623803	.	-	.	ID=gene579;Name=ybdK;Dbxref=GeneID:7148144;gbkey=Gene;gene=ybdK;locus_tag=EC55989_0572
NC_011748.1	RefSeq	CDS	622685	623803	.	-	0	ID=cds544;Name=YP_002401688.1;Parent=gene579;Note=ATP-dependent%3B carboxylate-amine ligase with weak glutamate--cysteine ligase activity;Dbxref=Genbank:YP_002401688.1,GeneID:7148144;gbkey=CDS;product=carboxylate-amine ligase;protein_id=YP_002401688.1;transl_table=11
NC_011748.1	RefSeq	gene	624245	624397	.	+	.	ID=gene580;Name=hokE;Dbxref=GeneID:7148145;gbkey=Gene;gene=hokE;locus_tag=EC55989_0573
NC_011748.1	RefSeq	CDS	624245	624397	.	+	0	ID=cds545;Name=YP_002401689.1;Parent=gene580;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 99291074%3B Product type f : factor;Dbxref=Genbank:YP_002401689.1,GeneID:7148145;gbkey=CDS;product=toxic polypeptide%2C small;protein_id=YP_002401689.1;transl_table=11
NC_011748.1	RefSeq	gene	625022	625651	.	-	.	ID=gene581;Name=entD;Dbxref=GeneID:7146452;gbkey=Gene;gene=entD;locus_tag=EC55989_0574
NC_011748.1	RefSeq	CDS	625022	625651	.	-	0	ID=cds546;Name=YP_002401690.1;Parent=gene581;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 89313305%2C 90132534%2C 91035252%2C 8939709%2C 9214294%3B Product type e : enzyme;Dbxref=Genbank:YP_002401690.1,GeneID:7146452;gbkey=CDS;product=phosphopantetheinyltransferase component of enterobactin synthase multienzyme complex;protein_id=YP_002401690.1;transl_table=11
NC_011748.1	RefSeq	gene	625817	628057	.	-	.	ID=gene582;Name=fepA;Dbxref=GeneID:7146002;gbkey=Gene;gene=fepA;locus_tag=EC55989_0575
NC_011748.1	RefSeq	CDS	625817	628057	.	-	0	ID=cds547;Name=YP_002401691.1;Parent=gene582;Note=Fep%3B Cbt%3B Cbr%3B FeuB%3B FepA%3B PfeA%3B IroN%3B BfeA%3B outer membrane receptor of ferric enterobactin and colicins B and D%3B interacts with the TonB-ExbBD complex which catalyzes the translocation of the siderophore to the periplasmic space;Dbxref=Genbank:YP_002401691.1,GeneID:7146002;gbkey=CDS;product=outer membrane receptor FepA;protein_id=YP_002401691.1;transl_table=11
NC_011748.1	RefSeq	gene	628378	629502	.	+	.	ID=gene583;Name=fes;Dbxref=GeneID:7146088;gbkey=Gene;gene=fes;locus_tag=EC55989_0576
NC_011748.1	RefSeq	CDS	628378	629502	.	+	0	ID=cds548;Name=YP_002401692.1;Parent=gene583;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 92291125%2C 94198561%2C 2974033%3B Product type e : enzyme;Dbxref=Genbank:YP_002401692.1,GeneID:7146088;gbkey=CDS;product=enterobactin%2Fferric enterobactin esterase;protein_id=YP_002401692.1;transl_table=11
NC_011748.1	RefSeq	gene	629505	629723	.	+	.	ID=gene584;Name=ybdZ;Dbxref=GeneID:7146094;gbkey=Gene;gene=ybdZ;locus_tag=EC55989_0577
NC_011748.1	RefSeq	CDS	629505	629723	.	+	0	ID=cds549;Name=YP_002401693.1;Parent=gene584;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002401693.1,GeneID:7146094;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401693.1;transl_table=11
NC_011748.1	RefSeq	gene	629720	633601	.	+	.	ID=gene585;Name=entF;Dbxref=GeneID:7148149;gbkey=Gene;gene=entF;locus_tag=EC55989_0578
NC_011748.1	RefSeq	CDS	629720	633601	.	+	0	ID=cds550;Name=YP_002401694.1;Parent=gene585;Note=with EntB%2C EntD%2C and EntE forms the multienzyme complex enterobactin synthase%3B EntF is the serine activating enzyme which catalyzes the formation of the amide and ester bonds of the cyclic enterobactin;Dbxref=Genbank:YP_002401694.1,GeneID:7148149;gbkey=CDS;product=enterobactin synthase subunit F;protein_id=YP_002401694.1;transl_table=11
NC_011748.1	RefSeq	gene	633817	634950	.	+	.	ID=gene586;Name=fepE;Dbxref=GeneID:7146004;gbkey=Gene;gene=fepE;locus_tag=EC55989_0579
NC_011748.1	RefSeq	CDS	633817	634950	.	+	0	ID=cds551;Name=YP_002401695.1;Parent=gene586;Note=part of the ferric enterobactin transport system%3B necessary for enetrobactin uptake;Dbxref=Genbank:YP_002401695.1,GeneID:7146004;gbkey=CDS;product=ferric enterobactin transport protein FepE;protein_id=YP_002401695.1;transl_table=11
NC_011748.1	RefSeq	gene	634947	635762	.	-	.	ID=gene587;Name=fepC;Dbxref=GeneID:7146092;gbkey=Gene;gene=fepC;locus_tag=EC55989_0580
NC_011748.1	RefSeq	CDS	634947	635762	.	-	0	ID=cds552;Name=YP_002401696.1;Parent=gene587;Note=with FepBDE is involved in the transport of ferric enterobactin;Dbxref=Genbank:YP_002401696.1,GeneID:7146092;gbkey=CDS;product=iron-enterobactin transporter ATP-binding protein;protein_id=YP_002401696.1;transl_table=11
NC_011748.1	RefSeq	gene	635759	636751	.	-	.	ID=gene588;Name=fepG;Dbxref=GeneID:7146090;gbkey=Gene;gene=fepG;locus_tag=EC55989_0581
NC_011748.1	RefSeq	CDS	635759	636751	.	-	0	ID=cds553;Name=YP_002401697.1;Parent=gene588;Note=with FepBCD is involved in the transport of ferric enterobactin;Dbxref=Genbank:YP_002401697.1,GeneID:7146090;gbkey=CDS;product=iron-enterobactin transporter permease;protein_id=YP_002401697.1;transl_table=11
NC_011748.1	RefSeq	gene	636748	637752	.	-	.	ID=gene589;Name=fepD;Dbxref=GeneID:7146093;gbkey=Gene;gene=fepD;locus_tag=EC55989_0582
NC_011748.1	RefSeq	CDS	636748	637752	.	-	0	ID=cds554;Name=YP_002401698.1;Parent=gene589;Note=with FepBCG is involved in the transport of ferric enterobactin;Dbxref=Genbank:YP_002401698.1,GeneID:7146093;gbkey=CDS;product=iron-enterobactin transporter membrane protein;protein_id=YP_002401698.1;transl_table=11
NC_011748.1	RefSeq	gene	637863	639113	.	+	.	ID=gene590;Name=ybdA;Dbxref=GeneID:7146091;gbkey=Gene;gene=ybdA;locus_tag=EC55989_0583
NC_011748.1	RefSeq	CDS	637863	639113	.	+	0	ID=cds555;Name=YP_002401699.1;Parent=gene590;Note=protein p43%3B inner membrane protein that exports enterobactin to the periplasmic space%3B member of the major facilitator superfamily %28MFS%29 of transporters;Dbxref=Genbank:YP_002401699.1,GeneID:7146091;gbkey=CDS;product=enterobactin exporter EntS;protein_id=YP_002401699.1;transl_table=11
NC_011748.1	RefSeq	gene	639117	640073	.	-	.	ID=gene591;Name=fepB;Dbxref=GeneID:7148138;gbkey=Gene;gene=fepB;locus_tag=EC55989_0584
NC_011748.1	RefSeq	CDS	639117	640073	.	-	0	ID=cds556;Name=YP_002401700.1;Parent=gene591;Note=with FepCDG is involved in the transport of ferric enterobactin;Dbxref=Genbank:YP_002401700.1,GeneID:7148138;gbkey=CDS;product=iron-enterobactin transporter periplasmic binding protein;protein_id=YP_002401700.1;transl_table=11
NC_011748.1	RefSeq	gene	640448	641623	.	+	.	ID=gene592;Name=entC;Dbxref=GeneID:7146089;gbkey=Gene;gene=entC;locus_tag=EC55989_0585
NC_011748.1	RefSeq	CDS	640448	641623	.	+	0	ID=cds557;Name=YP_002401701.1;Parent=gene592;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 89123153%2C 90165423%2C 90241936%2C 2110093%2C 2139473%3B Product type e : enzyme;Dbxref=Genbank:YP_002401701.1,GeneID:7146089;gbkey=CDS;product=isochorismate synthase 1;protein_id=YP_002401701.1;transl_table=11
NC_011748.1	RefSeq	gene	641633	643243	.	+	.	ID=gene593;Name=entE;Dbxref=GeneID:7146001;gbkey=Gene;gene=entE;locus_tag=EC55989_0586
NC_011748.1	RefSeq	CDS	641633	643243	.	+	0	ID=cds558;Name=YP_002401702.1;Parent=gene593;Note=bifunctional 2%2C3-dihydroxybenzoate-AMP ligase%2FS-dihydroxybenzoyltransferase%3B activates the carboxylate group of 2%2C3-dihydroxy-benzoate forming %282%2C3-dihydroxybenzoyl%29adenylate then catalyzes the acylation of holo-entB with 2%2C3-dihydroxy-benzoate adenylate;Dbxref=Genbank:YP_002401702.1,GeneID:7146001;gbkey=CDS;product=enterobactin synthase subunit E;protein_id=YP_002401702.1;transl_table=11
NC_011748.1	RefSeq	gene	643257	644114	.	+	.	ID=gene594;Name=entB;Dbxref=GeneID:7146003;gbkey=Gene;gene=entB;locus_tag=EC55989_0587
NC_011748.1	RefSeq	CDS	643257	644114	.	+	0	ID=cds559;Name=YP_002401703.1;Parent=gene594;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 20183918%2C 90241937%2C 91035252%2C 9485415%2C 97361959%2C 2521621%2C 2521622%3B Product type e : enzyme;Dbxref=Genbank:YP_002401703.1,GeneID:7146003;gbkey=CDS;product=isochorismatase;protein_id=YP_002401703.1;transl_table=11
NC_011748.1	RefSeq	gene	644114	644860	.	+	.	ID=gene595;Name=entA;Dbxref=GeneID:7146000;gbkey=Gene;gene=entA;locus_tag=EC55989_0588
NC_011748.1	RefSeq	CDS	644114	644860	.	+	0	ID=cds560;Name=YP_002401704.1;Parent=gene595;Note=catalyzes the formation of 2%2C3-dihydroxybenzoate from 2%2C3-dihydro-2%2C3-dihydroxybenzoate%3B involved in the biosynthesis of siderophores%2C enterobactin%2C bacillibactin or vibriobactin;Dbxref=Genbank:YP_002401704.1,GeneID:7146000;gbkey=CDS;product=2%2C3-dihydroxybenzoate-2%2C3-dehydrogenase;protein_id=YP_002401704.1;transl_table=11
NC_011748.1	RefSeq	gene	644863	645276	.	+	.	ID=gene596;Name=ybdB;Dbxref=GeneID:7145999;gbkey=Gene;gene=ybdB;locus_tag=EC55989_0589
NC_011748.1	RefSeq	CDS	644863	645276	.	+	0	ID=cds561;Name=YP_002401705.1;Parent=gene596;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 2521621%2C 2521622%2C 15808744%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002401705.1,GeneID:7145999;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401705.1;transl_table=11
NC_011748.1	RefSeq	gene	645457	647562	.	+	.	ID=gene597;Name=cstA;Dbxref=GeneID:7148139;gbkey=Gene;gene=cstA;locus_tag=EC55989_0590
NC_011748.1	RefSeq	CDS	645457	647562	.	+	0	ID=cds562;Name=YP_002401706.1;Parent=gene597;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 91162636%2C 2521622%3B Product type pf :  factor;Dbxref=Genbank:YP_002401706.1,GeneID:7148139;gbkey=CDS;product=carbon starvation protein;protein_id=YP_002401706.1;transl_table=11
NC_011748.1	RefSeq	gene	647744	647941	.	+	.	ID=gene598;Name=ybdD;Dbxref=GeneID:7145787;gbkey=Gene;gene=ybdD;locus_tag=EC55989_0591
NC_011748.1	RefSeq	CDS	647744	647941	.	+	0	ID=cds563;Name=YP_002401707.1;Parent=gene598;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002401707.1,GeneID:7145787;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401707.1;transl_table=11
NC_011748.1	RefSeq	gene	647951	649039	.	-	.	ID=gene599;Name=ybdH;Dbxref=GeneID:7148140;gbkey=Gene;gene=ybdH;locus_tag=EC55989_0592
NC_011748.1	RefSeq	CDS	647951	649039	.	-	0	ID=cds564;Name=YP_002401708.1;Parent=gene599;Note=member of the iron-containing alcohol dehydrogenase family%3B unknown function;Dbxref=Genbank:YP_002401708.1,GeneID:7148140;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401708.1;transl_table=11
NC_011748.1	RefSeq	gene	649148	650308	.	+	.	ID=gene600;Name=ybdL;Dbxref=GeneID:7148143;gbkey=Gene;gene=ybdL;locus_tag=EC55989_0593
NC_011748.1	RefSeq	CDS	649148	650308	.	+	0	ID=cds565;Name=YP_002401709.1;Parent=gene600;Note=catalyzes the transfer of an amino moiety;Dbxref=Genbank:YP_002401709.1,GeneID:7148143;gbkey=CDS;product=aminotransferase;protein_id=YP_002401709.1;transl_table=11
NC_011748.1	RefSeq	gene	650309	650938	.	-	.	ID=gene601;Name=ibrB;Dbxref=GeneID:7148146;gbkey=Gene;gene=ibrB;locus_tag=EC55989_0594
NC_011748.1	RefSeq	CDS	650309	650938	.	-	0	ID=cds566;Name=YP_002401710.1;Parent=gene601;Note=Evidence 2b : Function of strongly homologous gene%3B PubMedId : 12057959%3B Product type r : regulator;Dbxref=Genbank:YP_002401710.1,GeneID:7148146;gbkey=CDS;product=immunoglobulin-binding regulator;protein_id=YP_002401710.1;transl_table=11
NC_011748.1	RefSeq	gene	650911	652131	.	-	.	ID=gene602;Name=ibrA;Dbxref=GeneID:7146535;gbkey=Gene;gene=ibrA;locus_tag=EC55989_0595
NC_011748.1	RefSeq	CDS	650911	652131	.	-	0	ID=cds567;Name=YP_002401711.1;Parent=gene602;Note=Evidence 2b : Function of strongly homologous gene%3B PubMedId : 12057959%3B Product type r : regulator;Dbxref=Genbank:YP_002401711.1,GeneID:7146535;gbkey=CDS;product=immunoglobulin-binding regulator;protein_id=YP_002401711.1;transl_table=11
NC_011748.1	RefSeq	gene	652278	653180	.	-	.	ID=gene603;Name=ybdO;Dbxref=GeneID:7146533;gbkey=Gene;gene=ybdO;locus_tag=EC55989_0596
NC_011748.1	RefSeq	CDS	652278	653180	.	-	0	ID=cds568;Name=YP_002401712.1;Parent=gene603;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pr :  regulator;Dbxref=Genbank:YP_002401712.1,GeneID:7146533;gbkey=CDS;product=DNA-binding transcriptional regulator%2C LysR-type;protein_id=YP_002401712.1;transl_table=11
NC_011748.1	RefSeq	gene	653389	654135	.	-	.	ID=gene604;Name=dsbG;Dbxref=GeneID:7148147;gbkey=Gene;gene=dsbG;locus_tag=EC55989_0597
NC_011748.1	RefSeq	CDS	653389	654135	.	-	0	ID=cds569;Name=YP_002401713.1;Parent=gene604;Note=Involved in disulfide bond formation;Dbxref=Genbank:YP_002401713.1,GeneID:7148147;gbkey=CDS;product=disulfide isomerase%2Fthiol-disulfide oxidase;protein_id=YP_002401713.1;transl_table=11
NC_011748.1	RefSeq	gene	654507	655070	.	+	.	ID=gene605;Name=ahpC;Dbxref=GeneID:7145953;gbkey=Gene;gene=ahpC;locus_tag=EC55989_0598
NC_011748.1	RefSeq	CDS	654507	655070	.	+	0	ID=cds570;Name=YP_002401714.1;Parent=gene605;Note=with AhpF catalyzes the conversion of alkyl hydroperoxides to their corresponding alcohols%3B AhpC reduced the hydroperoxide substrate;Dbxref=Genbank:YP_002401714.1,GeneID:7145953;gbkey=CDS;product=alkyl hydroperoxide reductase;protein_id=YP_002401714.1;transl_table=11
NC_011748.1	RefSeq	gene	655199	656764	.	+	.	ID=gene606;Name=ahpF;Dbxref=GeneID:7145474;gbkey=Gene;gene=ahpF;locus_tag=EC55989_0599
NC_011748.1	RefSeq	CDS	655199	656764	.	+	0	ID=cds571;Name=YP_002401715.1;Parent=gene606;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 89197774%2C 1592833%3B Product type e : enzyme;Dbxref=Genbank:YP_002401715.1,GeneID:7145474;gbkey=CDS;product=alkyl hydroperoxide reductase;protein_id=YP_002401715.1;transl_table=11
NC_011748.1	RefSeq	gene	656885	657313	.	-	.	ID=gene607;Name=uspG;Dbxref=GeneID:7145475;gbkey=Gene;gene=uspG;locus_tag=EC55989_0600
NC_011748.1	RefSeq	CDS	656885	657313	.	-	0	ID=cds572;Name=YP_002401716.1;Parent=gene607;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 12732303%2C 12071968%3B Product type f : factor;Dbxref=Genbank:YP_002401716.1,GeneID:7145475;gbkey=CDS;product=universal stress protein UP12;protein_id=YP_002401716.1;transl_table=11
NC_011748.1	RefSeq	gene	657534	658772	.	+	.	ID=gene608;Name=ybdR;Dbxref=GeneID:7147931;gbkey=Gene;gene=ybdR;locus_tag=EC55989_0601
NC_011748.1	RefSeq	CDS	657534	658772	.	+	0	ID=cds573;Name=YP_002401717.1;Parent=gene608;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 8185833%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002401717.1,GeneID:7147931;gbkey=CDS;product=oxidoreductase%2C Zn-dependent and NAD%28P%29-binding;protein_id=YP_002401717.1;transl_table=11
NC_011748.1	RefSeq	gene	659003	659413	.	-	.	ID=gene609;Name=rnk;Dbxref=GeneID:7148148;gbkey=Gene;gene=rnk;locus_tag=EC55989_0602
NC_011748.1	RefSeq	CDS	659003	659413	.	-	0	ID=cds574;Name=YP_002401718.1;Parent=gene609;Note=Regulates the synthesis of nucleoside triphosphates for nucleic acid synthesis%2C CTP for lipid synthesis%2C and GTP for protein elongation;Dbxref=Genbank:YP_002401718.1,GeneID:7148148;gbkey=CDS;product=nucleoside diphosphate kinase regulator;protein_id=YP_002401718.1;transl_table=11
NC_011748.1	RefSeq	gene	659643	660449	.	-	.	ID=gene610;Name=rna;Dbxref=GeneID:7147452;gbkey=Gene;gene=rna;locus_tag=EC55989_0603
NC_011748.1	RefSeq	CDS	659643	660449	.	-	0	ID=cds575;Name=YP_002401719.1;Parent=gene610;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 90151658%2C 90264307%2C 2253883%2C 8188249%3B Product type e : enzyme;Dbxref=Genbank:YP_002401719.1,GeneID:7147452;gbkey=CDS;product=ribonuclease I;protein_id=YP_002401719.1;transl_table=11
NC_011748.1	RefSeq	gene	660563	662026	.	-	.	ID=gene611;Name=citT;Dbxref=GeneID:7147432;gbkey=Gene;gene=citT;locus_tag=EC55989_0604
NC_011748.1	RefSeq	CDS	660563	662026	.	-	0	ID=cds576;Name=YP_002401720.1;Parent=gene611;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 9696764%3B Product type t : transporter;Dbxref=Genbank:YP_002401720.1,GeneID:7147432;gbkey=CDS;product=citrate:succinate antiporter;protein_id=YP_002401720.1;transl_table=11
NC_011748.1	RefSeq	gene	662077	662955	.	-	.	ID=gene612;Name=citG;Dbxref=GeneID:7145716;gbkey=Gene;gene=citG;locus_tag=EC55989_0605
NC_011748.1	RefSeq	CDS	662077	662955	.	-	0	ID=cds577;Name=YP_002401721.1;Parent=gene612;Note=catalyzes the formation of 2%27-%285%27%27-triphosphoribosyl%29-3%27-dephospho-CoA from ATP and 3-dephospho-CoA;Dbxref=Genbank:YP_002401721.1,GeneID:7145716;gbkey=CDS;product=triphosphoribosyl-dephospho-CoA synthase;protein_id=YP_002401721.1;transl_table=11
NC_011748.1	RefSeq	gene	662930	663481	.	-	.	ID=gene613;Name=citX;Dbxref=GeneID:7145715;gbkey=Gene;gene=citX;locus_tag=EC55989_0606
NC_011748.1	RefSeq	CDS	662930	663481	.	-	0	ID=cds578;Name=YP_002401722.1;Parent=gene613;Note=2%27-%285%27%27-phosphoribosyl%29-3%27-dephospho-CoA transferase%3B holo-citrate lyase synthase%3B CitG forms the prosthetic group precursor 2%27-%285%27%27-triphosphoribosyl%29-3%27-dephospho-CoA which is then transferred to apo-ACP by CitX to produce holo-ACP and pyrophosphate;Dbxref=Genbank:YP_002401722.1,GeneID:7145715;gbkey=CDS;product=2-%285%27%27-triphosphoribosyl%29-3%27-dephosphocoenzyme-A synthase;protein_id=YP_002401722.1;transl_table=11
NC_011748.1	RefSeq	gene	663485	665017	.	-	.	ID=gene614;Name=citF;Dbxref=GeneID:7145717;gbkey=Gene;gene=citF;locus_tag=EC55989_0607
NC_011748.1	RefSeq	CDS	663485	665017	.	-	0	ID=cds579;Name=YP_002401723.1;Parent=gene614;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 84024606%2C 87214225%3B Product type e : enzyme;Dbxref=Genbank:YP_002401723.1,GeneID:7145717;gbkey=CDS;product=citrate lyase%2C citrate-ACP transferase %28alpha%29 subunit;protein_id=YP_002401723.1;transl_table=11
NC_011748.1	RefSeq	STS	663625	663829	.	+	.	ID=id44;Dbxref=UniSTS:154731;gbkey=STS
NC_011748.1	RefSeq	gene	665028	665936	.	-	.	ID=gene615;Name=citE;Dbxref=GeneID:7145714;gbkey=Gene;gene=citE;locus_tag=EC55989_0608
NC_011748.1	RefSeq	CDS	665028	665936	.	-	0	ID=cds580;Name=YP_002401724.1;Parent=gene615;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 84024606%2C 87214225%3B Product type e : enzyme;Dbxref=Genbank:YP_002401724.1,GeneID:7145714;gbkey=CDS;product=citrate lyase%2C citryl-ACP lyase %28beta%29 subunit;protein_id=YP_002401724.1;transl_table=11
NC_011748.1	RefSeq	gene	665933	666229	.	-	.	ID=gene616;Name=citD;Dbxref=GeneID:7145713;gbkey=Gene;gene=citD;locus_tag=EC55989_0609
NC_011748.1	RefSeq	CDS	665933	666229	.	-	0	ID=cds581;Name=YP_002401725.1;Parent=gene616;Note=acyl carrier protein%3B with CitE and CitF catalyzes the formation of oxaloacetate from citrate;Dbxref=Genbank:YP_002401725.1,GeneID:7145713;gbkey=CDS;product=citrate lyase subunit gamma;protein_id=YP_002401725.1;transl_table=11
NC_011748.1	RefSeq	gene	666244	667302	.	-	.	ID=gene617;Name=citC;Dbxref=GeneID:7145712;gbkey=Gene;gene=citC;locus_tag=EC55989_0610
NC_011748.1	RefSeq	CDS	666244	667302	.	-	0	ID=cds582;Name=YP_002401726.1;Parent=gene617;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 84024606%2C 87214225%3B Product type e : enzyme;Dbxref=Genbank:YP_002401726.1,GeneID:7145712;gbkey=CDS;product=citrate lyase synthetase;protein_id=YP_002401726.1;transl_table=11
NC_011748.1	RefSeq	gene	667682	669340	.	+	.	ID=gene618;Name=citA;Dbxref=GeneID:7145711;gbkey=Gene;gene=citA;locus_tag=EC55989_0611
NC_011748.1	RefSeq	CDS	667682	669340	.	+	0	ID=cds583;Name=YP_002401727.1;Parent=gene618;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 11889485%2C 21885746%2C 9701802%3B Product type r : regulator;Dbxref=Genbank:YP_002401727.1,GeneID:7145711;gbkey=CDS;product=sensory histidine kinase in two-component regulatory system with citB;protein_id=YP_002401727.1;transl_table=11
NC_011748.1	RefSeq	gene	669309	669989	.	+	.	ID=gene619;Name=dpiA;Dbxref=GeneID:7145709;gbkey=Gene;gene=dpiA;locus_tag=EC55989_0612
NC_011748.1	RefSeq	CDS	669309	669989	.	+	0	ID=cds584;Name=YP_002401728.1;Parent=gene619;Note=regulates the expression of citAB in citrate fermentation;Dbxref=Genbank:YP_002401728.1,GeneID:7145709;gbkey=CDS;product=two-component response regulator DpiA;protein_id=YP_002401728.1;transl_table=11
NC_011748.1	RefSeq	gene	670030	671415	.	-	.	ID=gene620;Name=dcuC;Dbxref=GeneID:7145710;gbkey=Gene;gene=dcuC;locus_tag=EC55989_0613
NC_011748.1	RefSeq	CDS	670030	671415	.	-	0	ID=cds585;Name=YP_002401729.1;Parent=gene620;Note=responsible for the transport of C4-dicarboxylates during anaerobic growth;Dbxref=Genbank:YP_002401729.1,GeneID:7145710;gbkey=CDS;product=C4-dicarboxylate transporter DcuC;protein_id=YP_002401729.1;transl_table=11
NC_011748.1	RefSeq	gene	672004	672564	.	+	.	ID=gene621;Name=pagP;Dbxref=GeneID:7145862;gbkey=Gene;gene=pagP;locus_tag=EC55989_0615
NC_011748.1	RefSeq	CDS	672004	672564	.	+	0	ID=cds586;Name=YP_002401730.1;Parent=gene621;Note=catalyzes the transfer of palmitate to lipid A;Dbxref=Genbank:YP_002401730.1,GeneID:7145862;gbkey=CDS;product=palmitoyl transferase;protein_id=YP_002401730.1;transl_table=11
NC_011748.1	RefSeq	gene	672739	672948	.	+	.	ID=gene622;Name=cspE;Dbxref=GeneID:7145751;gbkey=Gene;gene=cspE;locus_tag=EC55989_0616
NC_011748.1	RefSeq	CDS	672739	672948	.	+	0	ID=cds587;Name=YP_002401731.1;Parent=gene622;Note=member of the CspA family%3B constitutively expressed RNA%2FssDNA-binding protein%3B functions in helping cells adapt to low temperature%3B aids nucleic acid melting%3B participates in gene regulation%3B can act as a transcription antiterminator;Dbxref=Genbank:YP_002401731.1,GeneID:7145751;gbkey=CDS;product=cold shock protein CspE;protein_id=YP_002401731.1;transl_table=11
NC_011748.1	RefSeq	gene	673002	673385	.	-	.	ID=gene623;Name=crcB;Dbxref=GeneID:7145780;gbkey=Gene;gene=crcB;locus_tag=EC55989_0617
NC_011748.1	RefSeq	CDS	673002	673385	.	-	0	ID=cds588;Name=YP_002401732.1;Parent=gene623;Note=may be involved in chromosome condensation%3B overexpression in Escherichia coli protects against decondensation by camphor%3B overexpressing the protein results in an increase in supercoiling;Dbxref=Genbank:YP_002401732.1,GeneID:7145780;gbkey=CDS;product=camphor resistance protein CrcB;protein_id=YP_002401732.1;transl_table=11
NC_011748.1	RefSeq	gene	673703	674266	.	+	.	ID=gene624;Name=ybeM;Dbxref=GeneID:7145752;gbkey=Gene;gene=ybeM;locus_tag=EC55989_0618
NC_011748.1	RefSeq	CDS	673703	674266	.	+	0	ID=cds589;Name=YP_002401733.1;Parent=gene624;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002401733.1,GeneID:7145752;gbkey=CDS;product=amidase;protein_id=YP_002401733.1;transl_table=11
NC_011748.1	RefSeq	gene	674395	674598	.	+	.	ID=gene625;Name=tatE;Dbxref=GeneID:7148155;gbkey=Gene;gene=tatE;locus_tag=EC55989_0619
NC_011748.1	RefSeq	CDS	674395	674598	.	+	0	ID=cds590;Name=YP_002401734.1;Parent=gene625;Note=TatE%3B similar to TatA and found in some proteobacteria%3B part of system that translocates proteins with a conserved twin arginine motif across the inner membrane%3B capable of translocating folded substrates typically those with bound cofactors%3B similar to a protein import system in thylakoid membranes;Dbxref=Genbank:YP_002401734.1,GeneID:7148155;gbkey=CDS;product=twin arginine translocase protein E;protein_id=YP_002401734.1;transl_table=11
NC_011748.1	RefSeq	gene	674699	675664	.	-	.	ID=gene626;Name=lipA;Dbxref=GeneID:7147757;gbkey=Gene;gene=lipA;locus_tag=EC55989_0620
NC_011748.1	RefSeq	CDS	674699	675664	.	-	0	ID=cds591;Name=YP_002401735.1;Parent=gene626;Note=catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein %28ACP%29 bound to an octanoyl group to produce a lipoyl group;Dbxref=Genbank:YP_002401735.1,GeneID:7147757;gbkey=CDS;product=lipoyl synthase;protein_id=YP_002401735.1;transl_table=11
NC_011748.1	RefSeq	gene	675873	676826	.	-	.	ID=gene627;Name=ybeF;Dbxref=GeneID:7146703;gbkey=Gene;gene=ybeF;locus_tag=EC55989_0621
NC_011748.1	RefSeq	CDS	675873	676826	.	-	0	ID=cds592;Name=YP_002401736.1;Parent=gene627;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 12218038%3B Product type pr :  regulator;Dbxref=Genbank:YP_002401736.1,GeneID:7146703;gbkey=CDS;product=DNA-binding transcriptional regulator;protein_id=YP_002401736.1;transl_table=11
NC_011748.1	RefSeq	gene	677085	677726	.	-	.	ID=gene628;Name=lipB;Dbxref=GeneID:7148153;gbkey=Gene;gene=lipB;locus_tag=EC55989_0622
NC_011748.1	RefSeq	CDS	677085	677726	.	-	0	ID=cds593;Name=YP_002401737.1;Parent=gene628;Note=lipoyl%2Foctanoyltransferase%3B catalyzes the transfer of the lipoyl%2Foctanoyl moiety of lipoyl%2Foctanoyl-ACP onto lipoate-dependent enzymes like pyruvate dehydrogenase and the glycine cleavage system H protein;Dbxref=Genbank:YP_002401737.1,GeneID:7148153;gbkey=CDS;product=lipoate-protein ligase B;protein_id=YP_002401737.1;transl_table=11
NC_011748.1	RefSeq	gene	677827	678090	.	-	.	ID=gene629;Name=ybeD;Dbxref=GeneID:7146704;gbkey=Gene;gene=ybeD;locus_tag=EC55989_0623
NC_011748.1	RefSeq	CDS	677827	678090	.	-	0	ID=cds594;Name=YP_002401738.1;Parent=gene629;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 8444795;Dbxref=Genbank:YP_002401738.1,GeneID:7146704;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401738.1;transl_table=11
NC_011748.1	RefSeq	gene	678201	679412	.	-	.	ID=gene630;Name=dacA;Dbxref=GeneID:7148152;gbkey=Gene;gene=dacA;locus_tag=EC55989_0624
NC_011748.1	RefSeq	CDS	678201	679412	.	-	0	ID=cds595;Name=YP_002401739.1;Parent=gene630;Note=penicillin-binding protein 5%3B removes C-terminal D-alanyl residues from sugar-peptide cell wall precursors;Dbxref=Genbank:YP_002401739.1,GeneID:7148152;gbkey=CDS;product=D-alanyl-D-alanine carboxypeptidase;protein_id=YP_002401739.1;transl_table=11
NC_011748.1	RefSeq	gene	679551	680639	.	-	.	ID=gene631;Name=rlpA;Dbxref=GeneID:7145841;gbkey=Gene;gene=rlpA;locus_tag=EC55989_0625
NC_011748.1	RefSeq	CDS	679551	680639	.	-	0	ID=cds596;Name=YP_002401740.1;Parent=gene631;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 88058785%2C 2644207%3B Product type lp : lipoprotein;Dbxref=Genbank:YP_002401740.1,GeneID:7145841;gbkey=CDS;product=rare lipoprotein A;protein_id=YP_002401740.1;transl_table=11
NC_011748.1	RefSeq	gene	680650	681762	.	-	.	ID=gene632;Name=mrdB;Dbxref=GeneID:7147424;gbkey=Gene;gene=mrdB;locus_tag=EC55989_0626
NC_011748.1	RefSeq	CDS	680650	681762	.	-	0	ID=cds597;Name=YP_002401741.1;Parent=gene632;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 89123070%2C 90036736%2C 91072213%2C 3316191%3B Product type cp : cell process;Dbxref=Genbank:YP_002401741.1,GeneID:7147424;gbkey=CDS;product=cell wall shape-determining protein;protein_id=YP_002401741.1;transl_table=11
NC_011748.1	RefSeq	gene	681765	683666	.	-	.	ID=gene633;Name=mrdA;Dbxref=GeneID:7146901;gbkey=Gene;gene=mrdA;locus_tag=EC55989_0627
NC_011748.1	RefSeq	CDS	681765	683666	.	-	0	ID=cds598;Name=YP_002401742.1;Parent=gene633;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 86196149%2C 87030266%2C 89174517%2C 2644207%3B Product type e : enzyme;Dbxref=Genbank:YP_002401742.1,GeneID:7146901;gbkey=CDS;product=penicillin-binding protein 2;protein_id=YP_002401742.1;transl_table=11
NC_011748.1	RefSeq	gene	683697	684164	.	-	.	ID=gene634;Name=ybeA;Dbxref=GeneID:7146900;gbkey=Gene;gene=ybeA;locus_tag=EC55989_0628
NC_011748.1	RefSeq	CDS	683697	684164	.	-	0	ID=cds599;Name=YP_002401743.1;Parent=gene634;Note=SPOUT methyltransferase family protein%3B crystal structure shows homodimer%3B in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA;Dbxref=Genbank:YP_002401743.1,GeneID:7146900;gbkey=CDS;product=rRNA large subunit methyltransferase;protein_id=YP_002401743.1;transl_table=11
NC_011748.1	RefSeq	gene	684168	684485	.	-	.	ID=gene635;Name=ybeB;Dbxref=GeneID:7148150;gbkey=Gene;gene=ybeB;locus_tag=EC55989_0629
NC_011748.1	RefSeq	CDS	684168	684485	.	-	0	ID=cds600;Name=YP_002401744.1;Parent=gene635;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002401744.1,GeneID:7148150;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401744.1;transl_table=11
NC_011748.1	RefSeq	gene	684746	685357	.	-	.	ID=gene636;Name=phpB;Dbxref=GeneID:7148151;gbkey=Gene;gene=phpB;locus_tag=EC55989_0630
NC_011748.1	RefSeq	CDS	684746	685357	.	-	0	ID=cds601;Name=YP_002401745.1;Parent=gene636;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 7929373%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002401745.1,GeneID:7148151;gbkey=CDS;product=phosphatase with phosphoglycerate mutase domain;protein_id=YP_002401745.1;transl_table=11
NC_011748.1	RefSeq	gene	685381	686022	.	-	.	ID=gene637;Name=nadD;Dbxref=GeneID:7147188;gbkey=Gene;gene=nadD;locus_tag=EC55989_0631
NC_011748.1	RefSeq	CDS	685381	686022	.	-	0	ID=cds602;Name=YP_002401746.1;Parent=gene637;Note=transfers an adenyl group from ATP to NaMN to form nicotinic acid adenine dinucleotide %28NaAD%29 which is then converted to the ubiquitous compound NAD by NAD synthetase%3B essential enzyme in bacteria;Dbxref=Genbank:YP_002401746.1,GeneID:7147188;gbkey=CDS;product=nicotinic acid mononucleotide adenylyltransferase;protein_id=YP_002401746.1;transl_table=11
NC_011748.1	RefSeq	gene	686024	687055	.	-	.	ID=gene638;Name=holA;Dbxref=GeneID:7146945;gbkey=Gene;gene=holA;locus_tag=EC55989_0632
NC_011748.1	RefSeq	CDS	686024	687055	.	-	0	ID=cds603;Name=YP_002401747.1;Parent=gene638;Note=required for the assembly and function of the DNAX complex which is required for the assembly of the beta subunit onto primed DNA;Dbxref=Genbank:YP_002401747.1,GeneID:7146945;gbkey=CDS;product=DNA polymerase III subunit delta;protein_id=YP_002401747.1;transl_table=11
NC_011748.1	RefSeq	gene	687055	687636	.	-	.	ID=gene639;Name=rlpB;Dbxref=GeneID:7146453;gbkey=Gene;gene=rlpB;locus_tag=EC55989_0633
NC_011748.1	RefSeq	CDS	687055	687636	.	-	0	ID=cds604;Name=YP_002401748.1;Parent=gene639;Note=rare lipoprotein B%3B involved in the assembly of LPS in the outer membrane;Dbxref=Genbank:YP_002401748.1,GeneID:7146453;gbkey=CDS;product=LPS-assembly lipoprotein RlpB;protein_id=YP_002401748.1;transl_table=11
NC_011748.1	RefSeq	gene	687651	690233	.	-	.	ID=gene640;Name=leuS;Dbxref=GeneID:7147425;gbkey=Gene;gene=leuS;locus_tag=EC55989_0634
NC_011748.1	RefSeq	CDS	687651	690233	.	-	0	ID=cds605;Name=YP_002401749.1;Parent=gene640;Note=leucine--tRNA ligase%3B LeuRS%3B class-I aminoacyl-tRNA synthetase%3B charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA%3B due to the large number of codons that tRNA%28Leu%29 recognizes%2C the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA%2C but instead recognition is dependent on a conserved discriminator base A37 and a long arm%3B an editing domain hydrolyzes misformed products%3B in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase;Dbxref=Genbank:YP_002401749.1,GeneID:7147425;gbkey=CDS;product=leucyl-tRNA synthetase;protein_id=YP_002401749.1;transl_table=11
NC_011748.1	RefSeq	gene	690468	690950	.	+	.	ID=gene641;Name=ybeL;Dbxref=GeneID:7146695;gbkey=Gene;gene=ybeL;locus_tag=EC55989_0635
NC_011748.1	RefSeq	CDS	690468	690950	.	+	0	ID=cds606;Name=YP_002401750.1;Parent=gene641;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 11373298%2C 12105207%2C 3320963%2C 7567469;Dbxref=Genbank:YP_002401750.1,GeneID:7146695;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401750.1;transl_table=11
NC_011748.1	RefSeq	gene	691020	691997	.	-	.	ID=gene642;Name=ybeQ;Dbxref=GeneID:7148154;gbkey=Gene;gene=ybeQ;locus_tag=EC55989_0636
NC_011748.1	RefSeq	CDS	691020	691997	.	-	0	ID=cds607;Name=YP_002401751.1;Parent=gene642;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002401751.1,GeneID:7148154;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401751.1;transl_table=11
NC_011748.1	RefSeq	gene	692161	692868	.	+	.	ID=gene643;Name=ybeR;Dbxref=GeneID:7148156;gbkey=Gene;gene=ybeR;locus_tag=EC55989_0637
NC_011748.1	RefSeq	CDS	692161	692868	.	+	0	ID=cds608;Name=YP_002401752.1;Parent=gene643;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002401752.1,GeneID:7148156;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401752.1;transl_table=11
NC_011748.1	RefSeq	gene	692865	694292	.	+	.	ID=gene644;Name=djlB;Dbxref=GeneID:7148157;gbkey=Gene;gene=djlB;locus_tag=EC55989_0638
NC_011748.1	RefSeq	CDS	692865	694292	.	+	0	ID=cds609;Name=YP_002401753.1;Parent=gene644;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 12183460%2C 10574456%3B Product type pf :  factor;Dbxref=Genbank:YP_002401753.1,GeneID:7148157;gbkey=CDS;product=DnaJ-class chaperone;protein_id=YP_002401753.1;transl_table=11
NC_011748.1	RefSeq	gene	694302	694856	.	-	.	ID=gene645;Name=ybeT;Dbxref=GeneID:7145922;gbkey=Gene;gene=ybeT;locus_tag=EC55989_0639
NC_011748.1	RefSeq	CDS	694302	694856	.	-	0	ID=cds610;Name=YP_002401754.1;Parent=gene645;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002401754.1,GeneID:7145922;gbkey=CDS;product=outer membrane protein;protein_id=YP_002401754.1;transl_table=11
NC_011748.1	RefSeq	gene	694957	695664	.	+	.	ID=gene646;Name=ybeU;Dbxref=GeneID:7148158;gbkey=Gene;gene=ybeU;locus_tag=EC55989_0640
NC_011748.1	RefSeq	CDS	694957	695664	.	+	0	ID=cds611;Name=YP_002401755.1;Parent=gene646;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002401755.1,GeneID:7148158;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401755.1;transl_table=11
NC_011748.1	RefSeq	gene	695661	697112	.	+	.	ID=gene647;Name=djlC;Dbxref=GeneID:7148159;gbkey=Gene;gene=djlC;locus_tag=EC55989_0641
NC_011748.1	RefSeq	CDS	695661	697112	.	+	0	ID=cds612;Name=YP_002401756.1;Parent=gene647;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 12183460%2C 12054669%3B Product type f : factor;Dbxref=Genbank:YP_002401756.1,GeneID:7148159;gbkey=CDS;product=Hsc56 co-chaperone of HscC;protein_id=YP_002401756.1;transl_table=11
NC_011748.1	RefSeq	gene	697172	698824	.	-	.	ID=gene648;Name=hscC;Dbxref=GeneID:7145923;gbkey=Gene;gene=hscC;locus_tag=EC55989_0642;pseudo=true
NC_011748.1	RefSeq	region	697172	698824	.	-	.	ID=id45;Note=fragment of Hsp70 family chaperone Hsc62%2C binds to RpoD and inhibits transcription %28part 2%29%3BEvidence 7 : Gene remnant%3B Product type f : factor;Dbxref=GeneID:7145923;gbkey=misc_feature
NC_011748.1	RefSeq	gene	698815	698884	.	-	.	ID=gene649;Name=RNAout;Dbxref=GeneID:7146463;gbkey=Gene;gene=RNAout;locus_tag=EC55989_misc_RNA_15
NC_011748.1	RefSeq	transcript	698815	698884	.	-	.	ID=rna24;Parent=gene649;Note=Evidence 1c : Function experimentally demonstrated in the studied genus%3B PubMedId : 1691096%3B Product type n : RNA;Dbxref=GeneID:7146463;gbkey=misc_RNA;product=RNAout
NC_011748.1	RefSeq	exon	698815	698884	.	-	.	ID=id46;Parent=rna24;Note=Evidence 1c : Function experimentally demonstrated in the studied genus%3B PubMedId : 1691096%3B Product type n : RNA;Dbxref=GeneID:7146463;gbkey=misc_RNA;product=RNAout
NC_011748.1	RefSeq	gene	698876	700084	.	+	.	ID=gene650;Name=EC55989_0643;Dbxref=GeneID:7147440;gbkey=Gene;locus_tag=EC55989_0643
NC_011748.1	RefSeq	CDS	698876	700084	.	+	0	ID=cds613;Name=YP_002401757.1;Parent=gene650;Note=Evidence 2b : Function of strongly homologous gene%3B PubMedId : 10781570%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002401757.1,GeneID:7147440;gbkey=CDS;product=transposase%2C IS4 family%2C IS10L;protein_id=YP_002401757.1;transl_table=11
NC_011748.1	RefSeq	gene	700094	700180	.	-	.	ID=gene651;Name=hscC;Dbxref=GeneID:7144436;gbkey=Gene;gene=hscC;locus_tag=EC55989_0644;pseudo=true
NC_011748.1	RefSeq	region	700094	700180	.	-	.	ID=id47;Note=fragment of Hsp70 family chaperone Hsc62%2C binds to RpoD and inhibits transcription %28part 1%29%3BEvidence 7 : Gene remnant%3B Product type f : factor;Dbxref=GeneID:7144436;gbkey=misc_feature
NC_011748.1	RefSeq	gene	700264	701199	.	-	.	ID=gene652;Name=rihA;Dbxref=GeneID:7146464;gbkey=Gene;gene=rihA;locus_tag=EC55989_0645
NC_011748.1	RefSeq	CDS	700264	701199	.	-	0	ID=cds614;Name=YP_002401758.1;Parent=gene652;Note=Hydrolyzes with equal efficiency cytidine or uridine to ribose and cytosine or uracil%2C respectively%3B pyrimidine-specific;Dbxref=Genbank:YP_002401758.1,GeneID:7146464;gbkey=CDS;product=ribonucleoside hydrolase 1;protein_id=YP_002401758.1;transl_table=11
NC_011748.1	RefSeq	gene	701317	702042	.	-	.	ID=gene653;Name=gltL;Dbxref=GeneID:7147415;gbkey=Gene;gene=gltL;locus_tag=EC55989_0646
NC_011748.1	RefSeq	CDS	701317	702042	.	-	0	ID=cds615;Name=YP_002401759.1;Parent=gene653;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 11121068%3B Product type t : transporter;Dbxref=Genbank:YP_002401759.1,GeneID:7147415;gbkey=CDS;product=glutamate and aspartate transporter subunit %3B ATP-binding component of ABC superfamily;protein_id=YP_002401759.1;transl_table=11
NC_011748.1	RefSeq	gene	702042	702716	.	-	.	ID=gene654;Name=gltK;Dbxref=GeneID:7146333;gbkey=Gene;gene=gltK;locus_tag=EC55989_0647
NC_011748.1	RefSeq	CDS	702042	702716	.	-	0	ID=cds616;Name=YP_002401760.1;Parent=gene654;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 11121068%3B Product type t : transporter;Dbxref=Genbank:YP_002401760.1,GeneID:7146333;gbkey=CDS;product=glutamate and aspartate transporter subunit %3B membrane component of ABC superfamily;protein_id=YP_002401760.1;transl_table=11
NC_011748.1	RefSeq	gene	702716	703456	.	-	.	ID=gene655;Name=gltJ;Dbxref=GeneID:7146332;gbkey=Gene;gene=gltJ;locus_tag=EC55989_0648
NC_011748.1	RefSeq	CDS	702716	703456	.	-	0	ID=cds617;Name=YP_002401761.1;Parent=gene655;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 11121068%3B Product type t : transporter;Dbxref=Genbank:YP_002401761.1,GeneID:7146332;gbkey=CDS;product=glutamate and aspartate transporter subunit %3B membrane component of ABC superfamily;protein_id=YP_002401761.1;transl_table=11
NC_011748.1	RefSeq	gene	703468	703625	.	-	.	ID=gene656;Name=EC55989_misc_RNA_16;Dbxref=GeneID:7146331;gbkey=Gene;locus_tag=EC55989_misc_RNA_16
NC_011748.1	RefSeq	transcript	703468	703625	.	-	.	ID=rna25;Parent=gene656;Dbxref=GeneID:7146331;gbkey=misc_RNA;product=sroC
NC_011748.1	RefSeq	exon	703468	703625	.	-	.	ID=id48;Parent=rna25;Dbxref=GeneID:7146331;gbkey=misc_RNA;product=sroC
NC_011748.1	RefSeq	gene	703626	704534	.	-	.	ID=gene657;Name=gltI;Dbxref=GeneID:7145301;gbkey=Gene;gene=gltI;locus_tag=EC55989_0649
NC_011748.1	RefSeq	CDS	703626	704534	.	-	0	ID=cds618;Name=YP_002401762.1;Parent=gene657;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 1091636%2C 1091635%2C 10493123%2C 8740179%2C 10972807%3B Product type t : transporter;Dbxref=Genbank:YP_002401762.1,GeneID:7145301;gbkey=CDS;product=glutamate and aspartate transporter subunit;protein_id=YP_002401762.1;transl_table=11
NC_011748.1	RefSeq	gene	704989	706065	.	+	.	ID=gene658;Name=EC55989_0650;Dbxref=GeneID:7146330;gbkey=Gene;locus_tag=EC55989_0650;pseudo=true
NC_011748.1	RefSeq	region	704989	706065	.	+	.	ID=id49;Note=fragment of  membrane protein %28part 1%29%3BEvidence 7 : Gene remnant;Dbxref=GeneID:7146330;gbkey=misc_feature
NC_011748.1	RefSeq	gene	706080	706865	.	+	.	ID=gene659;Name=EC55989_0651;Dbxref=GeneID:7144437;gbkey=Gene;locus_tag=EC55989_0651;pseudo=true
NC_011748.1	RefSeq	region	706080	706865	.	+	.	ID=id50;Note=fragment of  membrane protein %28part 2%29%3BEvidence 7 : Gene remnant;Dbxref=GeneID:7144437;gbkey=misc_feature
NC_011748.1	RefSeq	gene	706943	708481	.	-	.	ID=gene660;Name=lnt;Dbxref=GeneID:7144438;gbkey=Gene;gene=lnt;locus_tag=EC55989_0652
NC_011748.1	RefSeq	CDS	706943	708481	.	-	0	ID=cds619;Name=YP_002401763.1;Parent=gene660;Note=Transfers the fatty acyl group on membrane lipoproteins;Dbxref=Genbank:YP_002401763.1,GeneID:7144438;gbkey=CDS;product=apolipoprotein N-acyltransferase;protein_id=YP_002401763.1;transl_table=11
NC_011748.1	RefSeq	gene	708506	709384	.	-	.	ID=gene661;Name=ybeX;Dbxref=GeneID:7146714;gbkey=Gene;gene=ybeX;locus_tag=EC55989_0653
NC_011748.1	RefSeq	CDS	708506	709384	.	-	0	ID=cds620;Name=YP_002401764.1;Parent=gene661;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 1779764%3B Product type pt :  transporter;Dbxref=Genbank:YP_002401764.1,GeneID:7146714;gbkey=CDS;product=protein involved in divalent ion export;protein_id=YP_002401764.1;transl_table=11
NC_011748.1	RefSeq	gene	709474	709941	.	-	.	ID=gene662;Name=ybeY;Dbxref=GeneID:7148160;gbkey=Gene;gene=ybeY;locus_tag=EC55989_0654
NC_011748.1	RefSeq	CDS	709474	709941	.	-	0	ID=cds621;Name=YP_002401765.1;Parent=gene662;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 16511207%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002401765.1,GeneID:7148160;gbkey=CDS;product=metalloprotease;protein_id=YP_002401765.1;transl_table=11
NC_011748.1	RefSeq	gene	709938	711017	.	-	.	ID=gene663;Name=ybeZ;Dbxref=GeneID:7148161;gbkey=Gene;gene=ybeZ;locus_tag=EC55989_0655
NC_011748.1	RefSeq	CDS	709938	711017	.	-	0	ID=cds622;Name=YP_002401766.1;Parent=gene663;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 12762842%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002401766.1,GeneID:7148161;gbkey=CDS;product=enzyme with nucleoside triphosphate hydrolase domain;protein_id=YP_002401766.1;transl_table=11
NC_011748.1	RefSeq	gene	711131	712555	.	-	.	ID=gene664;Name=miaB;Dbxref=GeneID:7148162;gbkey=Gene;gene=miaB;locus_tag=EC55989_0656
NC_011748.1	RefSeq	CDS	711131	712555	.	-	0	ID=cds623;Name=YP_002401767.1;Parent=gene664;Note=catalyzes the formation of 2-methylthio-N6-%28dimethylallyl%29adenosine %28ms%282%29i%286%29A%29 at position 37 in tRNAs that read codons beginning with uridine from N6-%28dimethylallyl%29adenosine %28i%286%29A%29;Dbxref=Genbank:YP_002401767.1,GeneID:7148162;gbkey=CDS;product=%28dimethylallyl%29adenosine tRNA methylthiotransferase;protein_id=YP_002401767.1;transl_table=11
NC_011748.1	RefSeq	gene	712701	713876	.	+	.	ID=gene665;Name=ubiF;Dbxref=GeneID:7146853;gbkey=Gene;gene=ubiF;locus_tag=EC55989_0657
NC_011748.1	RefSeq	CDS	712701	713876	.	+	0	ID=cds624;Name=YP_002401768.1;Parent=gene665;Note=catalyzes the formation of 2-octaprenyl-3-methyl-5-hydroxy-6-methoxy-1%2C4-benzoquinol from 2-octaprenyl-3-methyl-6-methoxy-1%2C4-benzoquinol%3B functions in the biosynthesis of ubiquinone or coenzyme Q;Dbxref=Genbank:YP_002401768.1,GeneID:7146853;gbkey=CDS;product=2-octaprenyl-3-methyl-6-methoxy-1%2C4-benzoquinol hydroxylase;protein_id=YP_002401768.1;transl_table=11
NC_011748.1	RefSeq	gene	714030	714104	.	-	.	ID=gene666;Name=EC55989_tRNA94;Dbxref=GeneID:7147892;gbkey=Gene;locus_tag=EC55989_tRNA94
NC_011748.1	RefSeq	tRNA	714030	714104	.	-	.	ID=rna26;Dbxref=GeneID:7147892;gbkey=tRNA;product=tRNA-Gln
NC_011748.1	RefSeq	exon	714030	714104	.	-	.	ID=id51;Parent=rna26;Dbxref=GeneID:7147892;gbkey=tRNA;product=tRNA-Gln
NC_011748.1	RefSeq	gene	714142	714216	.	-	.	ID=gene667;Name=EC55989_tRNA93;Dbxref=GeneID:7145410;gbkey=Gene;locus_tag=EC55989_tRNA93
NC_011748.1	RefSeq	tRNA	714142	714216	.	-	.	ID=rna27;Dbxref=GeneID:7145410;gbkey=tRNA;product=tRNA-Gln
NC_011748.1	RefSeq	exon	714142	714216	.	-	.	ID=id52;Parent=rna27;Dbxref=GeneID:7145410;gbkey=tRNA;product=tRNA-Gln
NC_011748.1	RefSeq	gene	714265	714341	.	-	.	ID=gene668;Name=EC55989_tRNA92;Dbxref=GeneID:7145409;gbkey=Gene;locus_tag=EC55989_tRNA92
NC_011748.1	RefSeq	tRNA	714265	714341	.	-	.	ID=rna28;Dbxref=GeneID:7145409;gbkey=tRNA;product=tRNA-Met
NC_011748.1	RefSeq	exon	714265	714341	.	-	.	ID=id53;Parent=rna28;Dbxref=GeneID:7145409;gbkey=tRNA;product=tRNA-Met
NC_011748.1	RefSeq	gene	714357	714431	.	-	.	ID=gene669;Name=EC55989_tRNA91;Dbxref=GeneID:7145408;gbkey=Gene;locus_tag=EC55989_tRNA91
NC_011748.1	RefSeq	tRNA	714357	714431	.	-	.	ID=rna29;Dbxref=GeneID:7145408;gbkey=tRNA;product=tRNA-Gln
NC_011748.1	RefSeq	exon	714357	714431	.	-	.	ID=id54;Parent=rna29;Dbxref=GeneID:7145408;gbkey=tRNA;product=tRNA-Gln
NC_011748.1	RefSeq	gene	714466	714540	.	-	.	ID=gene670;Name=EC55989_tRNA90;Dbxref=GeneID:7145407;gbkey=Gene;locus_tag=EC55989_tRNA90
NC_011748.1	RefSeq	tRNA	714466	714540	.	-	.	ID=rna30;Dbxref=GeneID:7145407;gbkey=tRNA;product=tRNA-Gln
NC_011748.1	RefSeq	exon	714466	714540	.	-	.	ID=id55;Parent=rna30;Dbxref=GeneID:7145407;gbkey=tRNA;product=tRNA-Gln
NC_011748.1	RefSeq	gene	714564	714648	.	-	.	ID=gene671;Name=EC55989_tRNA89;Dbxref=GeneID:7145406;gbkey=Gene;locus_tag=EC55989_tRNA89
NC_011748.1	RefSeq	tRNA	714564	714648	.	-	.	ID=rna31;Dbxref=GeneID:7145406;gbkey=tRNA;product=tRNA-Leu
NC_011748.1	RefSeq	exon	714564	714648	.	-	.	ID=id56;Parent=rna31;Dbxref=GeneID:7145406;gbkey=tRNA;product=tRNA-Leu
NC_011748.1	RefSeq	gene	714657	714733	.	-	.	ID=gene672;Name=EC55989_tRNA88;Dbxref=GeneID:7145404;gbkey=Gene;locus_tag=EC55989_tRNA88
NC_011748.1	RefSeq	tRNA	714657	714733	.	-	.	ID=rna32;Dbxref=GeneID:7145404;gbkey=tRNA;product=tRNA-Met
NC_011748.1	RefSeq	exon	714657	714733	.	-	.	ID=id57;Parent=rna32;Dbxref=GeneID:7145404;gbkey=tRNA;product=tRNA-Met
NC_011748.1	RefSeq	gene	715114	716778	.	-	.	ID=gene673;Name=asnB;Dbxref=GeneID:7145403;gbkey=Gene;gene=asnB;locus_tag=EC55989_0660
NC_011748.1	RefSeq	CDS	715114	716778	.	-	0	ID=cds625;Name=YP_002401769.1;Parent=gene673;Note=functions in asparagine biosynthesis%3B converts glutamine%2C aspartate%2C ATP%2C and water to glutamate%2C asparagine%2C pyrophosphate and AMP;Dbxref=Genbank:YP_002401769.1,GeneID:7145403;gbkey=CDS;product=asparagine synthetase B;protein_id=YP_002401769.1;transl_table=11
NC_011748.1	RefSeq	gene	717035	717787	.	-	.	ID=gene674;Name=nagD;Dbxref=GeneID:7145568;gbkey=Gene;gene=nagD;locus_tag=EC55989_0661
NC_011748.1	RefSeq	CDS	717035	717787	.	-	0	ID=cds626;Name=YP_002401770.1;Parent=gene674;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 16430214%2C 89343637%3B Product type e : enzyme;Dbxref=Genbank:YP_002401770.1,GeneID:7145568;gbkey=CDS;product=UMP phosphatase;protein_id=YP_002401770.1;transl_table=11
NC_011748.1	RefSeq	gene	717835	719055	.	-	.	ID=gene675;Name=nagC;Dbxref=GeneID:7146951;gbkey=Gene;gene=nagC;locus_tag=EC55989_0662
NC_011748.1	RefSeq	CDS	717835	719055	.	-	0	ID=cds627;Name=YP_002401771.1;Parent=gene675;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 15066032%2C 90136533%2C 91171292%2C 92114782%2C 92356048%2C 2190615%2C 2668691%2C 7545108%3B Product type r : regulator;Dbxref=Genbank:YP_002401771.1,GeneID:7146951;gbkey=CDS;product=DNA-binding transcriptional dual regulator;protein_id=YP_002401771.1;transl_table=11
NC_011748.1	RefSeq	gene	719064	720212	.	-	.	ID=gene676;Name=nagA;Dbxref=GeneID:7146950;gbkey=Gene;gene=nagA;locus_tag=EC55989_0663
NC_011748.1	RefSeq	CDS	719064	720212	.	-	0	ID=cds628;Name=YP_002401772.1;Parent=gene676;Note=catalyzes the formation of glucosamine 6-phosphate from N-acetylglucosamine 6-phosphate;Dbxref=Genbank:YP_002401772.1,GeneID:7146950;gbkey=CDS;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=YP_002401772.1;transl_table=11
NC_011748.1	RefSeq	gene	720272	721072	.	-	.	ID=gene677;Name=nagB;Dbxref=GeneID:7146948;gbkey=Gene;gene=nagB;locus_tag=EC55989_0664
NC_011748.1	RefSeq	CDS	720272	721072	.	-	0	ID=cds629;Name=YP_002401773.1;Parent=gene677;Note=catalyzes the reversible formation of fructose 6-phosphate from glucosamine 6-phosphate;Dbxref=Genbank:YP_002401773.1,GeneID:7146948;gbkey=CDS;product=glucosamine-6-phosphate deaminase;protein_id=YP_002401773.1;transl_table=11
NC_011748.1	RefSeq	gene	721405	723351	.	+	.	ID=gene678;Name=nagE;Dbxref=GeneID:7146949;gbkey=Gene;gene=nagE;locus_tag=EC55989_0665
NC_011748.1	RefSeq	CDS	721405	723351	.	+	0	ID=cds630;Name=YP_002401774.1;Parent=gene678;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;Dbxref=Genbank:YP_002401774.1,GeneID:7146949;gbkey=CDS;product=PTS system N-acetyl glucosamine specific transporter subunit IIABC;protein_id=YP_002401774.1;transl_table=11
NC_011748.1	RefSeq	gene	723554	725218	.	+	.	ID=gene679;Name=glnS;Dbxref=GeneID:7146952;gbkey=Gene;gene=glnS;locus_tag=EC55989_0666
NC_011748.1	RefSeq	CDS	723554	725218	.	+	0	ID=cds631;Name=YP_002401775.1;Parent=gene679;Note=catalyzes a two-step reaction%2C first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA;Dbxref=Genbank:YP_002401775.1,GeneID:7146952;gbkey=CDS;product=glutaminyl-tRNA synthetase;protein_id=YP_002401775.1;transl_table=11
NC_011748.1	RefSeq	gene	725664	727070	.	+	.	ID=gene680;Name=ybfM;Dbxref=GeneID:7146312;gbkey=Gene;gene=ybfM;locus_tag=EC55989_0667
NC_011748.1	RefSeq	CDS	725664	727070	.	+	0	ID=cds632;Name=YP_002401776.1;Parent=gene680;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 2118530%2C 9636669%3B Product type pt :  transporter;Dbxref=Genbank:YP_002401776.1,GeneID:7146312;gbkey=CDS;product=outer membrane porin;protein_id=YP_002401776.1;transl_table=11
NC_011748.1	RefSeq	gene	727120	727446	.	+	.	ID=gene681;Name=ybfN;Dbxref=GeneID:7148168;gbkey=Gene;gene=ybfN;locus_tag=EC55989_0668
NC_011748.1	RefSeq	CDS	727120	727446	.	+	0	ID=cds633;Name=YP_002401777.1;Parent=gene681;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type lp : lipoprotein;Dbxref=Genbank:YP_002401777.1,GeneID:7148168;gbkey=CDS;product=lipoprotein;protein_id=YP_002401777.1;transl_table=11
NC_011748.1	RefSeq	gene	727530	727976	.	-	.	ID=gene682;Name=fur;Dbxref=GeneID:7148169;gbkey=Gene;gene=fur;locus_tag=EC55989_0669
NC_011748.1	RefSeq	CDS	727530	727976	.	-	0	ID=cds634;Name=YP_002401778.1;Parent=gene682;Note=negatively regulates a number of operons that encode enzymes involved in iron transport%3B activated by manganese%3B forms a homodimer;Dbxref=Genbank:YP_002401778.1,GeneID:7148169;gbkey=CDS;product=ferric uptake regulator;protein_id=YP_002401778.1;transl_table=11
NC_011748.1	RefSeq	gene	728021	728275	.	+	.	ID=gene683;Name=EC55989_0670;Dbxref=GeneID:7146233;gbkey=Gene;locus_tag=EC55989_0670
NC_011748.1	RefSeq	CDS	728021	728275	.	+	0	ID=cds635;Name=YP_002401779.1;Parent=gene683;Note=Evidence 6 : Doubtful CDS;Dbxref=Genbank:YP_002401779.1,GeneID:7146233;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401779.1;transl_table=11
NC_011748.1	RefSeq	gene	728265	728795	.	-	.	ID=gene684;Name=fldA;Dbxref=GeneID:7144439;gbkey=Gene;gene=fldA;locus_tag=EC55989_0671
NC_011748.1	RefSeq	CDS	728265	728795	.	-	0	ID=cds636;Name=YP_002401780.1;Parent=gene684;Note=An electron-transfer protein%3B flavodoxin binds one FMN molecule%2C which serves as a redox-active prosthetic group;Dbxref=Genbank:YP_002401780.1,GeneID:7144439;gbkey=CDS;product=flavodoxin FldA;protein_id=YP_002401780.1;transl_table=11
NC_011748.1	RefSeq	gene	728935	729228	.	-	.	ID=gene685;Name=ybfE;Dbxref=GeneID:7146122;gbkey=Gene;gene=ybfE;locus_tag=EC55989_0672
NC_011748.1	RefSeq	CDS	728935	729228	.	-	0	ID=cds637;Name=YP_002401781.1;Parent=gene685;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 20223640%2C 12427949%3B Product type cp : cell process;Dbxref=Genbank:YP_002401781.1,GeneID:7146122;gbkey=CDS;product=LexA regulated protein;protein_id=YP_002401781.1;transl_table=11
NC_011748.1	RefSeq	gene	729368	730132	.	-	.	ID=gene686;Name=ybfF;Dbxref=GeneID:7148166;gbkey=Gene;gene=ybfF;locus_tag=EC55989_0673
NC_011748.1	RefSeq	CDS	729368	730132	.	-	0	ID=cds638;Name=YP_002401782.1;Parent=gene686;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 15808744%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002401782.1,GeneID:7148166;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401782.1;transl_table=11
NC_011748.1	RefSeq	gene	730317	730862	.	+	.	ID=gene687;Name=seqA;Dbxref=GeneID:7148167;gbkey=Gene;gene=seqA;locus_tag=EC55989_0674
NC_011748.1	RefSeq	CDS	730317	730862	.	+	0	ID=cds639;Name=YP_002401783.1;Parent=gene687;Note=negative modulator of the initiation of chromosome replication;Dbxref=Genbank:YP_002401783.1,GeneID:7148167;gbkey=CDS;product=replication initiation regulator SeqA;protein_id=YP_002401783.1;transl_table=11
NC_011748.1	RefSeq	gene	730888	732528	.	+	.	ID=gene688;Name=pgm;Dbxref=GeneID:7147631;gbkey=Gene;gene=pgm;locus_tag=EC55989_0675
NC_011748.1	RefSeq	CDS	730888	732528	.	+	0	ID=cds640;Name=YP_002401784.1;Parent=gene688;Note=catalyzes the interconversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate;Dbxref=Genbank:YP_002401784.1,GeneID:7147631;gbkey=CDS;product=phosphoglucomutase;protein_id=YP_002401784.1;transl_table=11
NC_011748.1	RefSeq	gene	732584	733903	.	-	.	ID=gene689;Name=potE;Dbxref=GeneID:7147153;gbkey=Gene;gene=potE;locus_tag=EC55989_0676
NC_011748.1	RefSeq	CDS	732584	733903	.	-	0	ID=cds641;Name=YP_002401785.1;Parent=gene689;Note=catalyzes the uptake of putrescine via a proton symport mechanism%2C as well as the efflux of putrescine by a putrescine%2Fornithine antiport system;Dbxref=Genbank:YP_002401785.1,GeneID:7147153;gbkey=CDS;product=putrescine transporter;protein_id=YP_002401785.1;transl_table=11
NC_011748.1	RefSeq	gene	733900	736098	.	-	.	ID=gene690;Name=speF;Dbxref=GeneID:7147213;gbkey=Gene;gene=speF;locus_tag=EC55989_0677
NC_011748.1	RefSeq	CDS	733900	736098	.	-	0	ID=cds642;Name=YP_002401786.1;Parent=gene690;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 92041955%3B Product type e : enzyme;Dbxref=Genbank:YP_002401786.1,GeneID:7147213;gbkey=CDS;product=ornithine decarboxylase;protein_id=YP_002401786.1;transl_table=11
NC_011748.1	RefSeq	gene	736788	737465	.	-	.	ID=gene691;Name=kdpE;Dbxref=GeneID:7147690;gbkey=Gene;gene=kdpE;locus_tag=EC55989_0678
NC_011748.1	RefSeq	CDS	736788	737465	.	-	0	ID=cds643;Name=YP_002401787.1;Parent=gene691;Note=response regulator in two-component regulatory system with KdpD%3B regulates the kdp operon involved in potassium transport;Dbxref=Genbank:YP_002401787.1,GeneID:7147690;gbkey=CDS;product=DNA-binding transcriptional activator KdpE;protein_id=YP_002401787.1;transl_table=11
NC_011748.1	RefSeq	gene	737462	740146	.	-	.	ID=gene692;Name=kdpD;Dbxref=GeneID:7146658;gbkey=Gene;gene=kdpD;locus_tag=EC55989_0679
NC_011748.1	RefSeq	CDS	737462	740146	.	-	0	ID=cds644;Name=YP_002401788.1;Parent=gene692;Note=sensory histidine kinase in two-component regulatory system with KdpE%3B signal sensing protein;Dbxref=Genbank:YP_002401788.1,GeneID:7146658;gbkey=CDS;product=sensor protein KdpD;protein_id=YP_002401788.1;transl_table=11
NC_011748.1	RefSeq	gene	740139	740711	.	-	.	ID=gene693;Name=kdpC;Dbxref=GeneID:7146657;gbkey=Gene;gene=kdpC;locus_tag=EC55989_0680
NC_011748.1	RefSeq	CDS	740139	740711	.	-	0	ID=cds645;Name=YP_002401789.1;Parent=gene693;Note=One of the components of the high-affinity ATP-driven potassium transport %28or KDP%29system%2C which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions. The C subunit may be involved in assembly of the KDP complex;Dbxref=Genbank:YP_002401789.1,GeneID:7146657;gbkey=CDS;product=potassium-transporting ATPase subunit C;protein_id=YP_002401789.1;transl_table=11
NC_011748.1	RefSeq	gene	740720	742768	.	-	.	ID=gene694;Name=kdpB;Dbxref=GeneID:7146656;gbkey=Gene;gene=kdpB;locus_tag=EC55989_0681
NC_011748.1	RefSeq	CDS	740720	742768	.	-	0	ID=cds646;Name=YP_002401790.1;Parent=gene694;Note=One of the components of the high-affinity ATP-driven potassium transport %28or KDP%29 system%2C which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions;Dbxref=Genbank:YP_002401790.1,GeneID:7146656;gbkey=CDS;product=potassium-transporting ATPase subunit B;protein_id=YP_002401790.1;transl_table=11
NC_011748.1	RefSeq	gene	742791	744464	.	-	.	ID=gene695;Name=kdpA;Dbxref=GeneID:7146655;gbkey=Gene;gene=kdpA;locus_tag=EC55989_0682
NC_011748.1	RefSeq	CDS	742791	744464	.	-	0	ID=cds647;Name=YP_002401791.1;Parent=gene695;Note=catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions;Dbxref=Genbank:YP_002401791.1,GeneID:7146655;gbkey=CDS;product=potassium-transporting ATPase subunit A;protein_id=YP_002401791.1;transl_table=11
NC_011748.1	RefSeq	gene	744866	745072	.	+	.	ID=gene696;Name=ybfA;Dbxref=GeneID:7146654;gbkey=Gene;gene=ybfA;locus_tag=EC55989_0683
NC_011748.1	RefSeq	CDS	744866	745072	.	+	0	ID=cds648;Name=YP_002401792.1;Parent=gene696;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002401792.1,GeneID:7146654;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401792.1;transl_table=11
NC_011748.1	RefSeq	gene	745315	749508	.	+	.	ID=gene697;Name=rhsC;Dbxref=GeneID:7148163;gbkey=Gene;gene=rhsC;locus_tag=EC55989_0684
NC_011748.1	RefSeq	CDS	745315	749508	.	+	0	ID=cds649;Name=YP_002401793.1;Parent=gene697;Note=Evidence 2b : Function of strongly homologous gene%3B PubMedId : 98361897%2C 2403547%2C 2644231%2C 7934896%2C 8387990%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002401793.1,GeneID:7148163;gbkey=CDS;product=rhsC element core protein RshC;protein_id=YP_002401793.1;transl_table=11
NC_011748.1	RefSeq	gene	749508	749834	.	+	.	ID=gene698;Name=ybfB;Dbxref=GeneID:7147402;gbkey=Gene;gene=ybfB;locus_tag=EC55989_0685
NC_011748.1	RefSeq	CDS	749508	749834	.	+	0	ID=cds650;Name=YP_002401794.1;Parent=gene698;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002401794.1,GeneID:7147402;gbkey=CDS;product=inner membrane protein;protein_id=YP_002401794.1;transl_table=11
NC_011748.1	RefSeq	gene	749952	751385	.	+	.	ID=gene699;Name=ybfO;Dbxref=GeneID:7148164;gbkey=Gene;gene=ybfO;locus_tag=EC55989_0686
NC_011748.1	RefSeq	CDS	749952	751385	.	+	0	ID=cds651;Name=YP_002401795.1;Parent=gene699;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002401795.1,GeneID:7148164;gbkey=CDS;product=rhs-like;protein_id=YP_002401795.1;transl_table=11
NC_011748.1	RefSeq	gene	751382	751951	.	+	.	ID=gene700;Name=ybfC;Dbxref=GeneID:7148170;gbkey=Gene;gene=ybfC;locus_tag=EC55989_0687
NC_011748.1	RefSeq	CDS	751382	751951	.	+	0	ID=cds652;Name=YP_002401796.1;Parent=gene700;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002401796.1,GeneID:7148170;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401796.1;transl_table=11
NC_011748.1	RefSeq	gene	752177	752431	.	+	.	ID=gene701;Name=yhhI;Dbxref=GeneID:7148165;gbkey=Gene;gene=yhhI;locus_tag=EC55989_0688;pseudo=true
NC_011748.1	RefSeq	region	752177	752431	.	+	.	ID=id58;Note=fragment of  transposase %28partial%29%3BEvidence 7 : Gene remnant%3B Product type ph : phenotype;Dbxref=GeneID:7148165;gbkey=misc_feature
NC_011748.1	RefSeq	gene	752632	753318	.	+	.	ID=gene702;Name=yhhI;Dbxref=GeneID:7148981;gbkey=Gene;gene=yhhI;locus_tag=EC55989_0689;pseudo=true
NC_011748.1	RefSeq	region	752632	753318	.	+	.	ID=id59;Note=fragment of  transposase %28partial%29%3BEvidence 7 : Gene remnant%3B Product type ph : phenotype;Dbxref=GeneID:7148981;gbkey=misc_feature
NC_011748.1	RefSeq	gene	753466	753975	.	+	.	ID=gene703;Name=ybgA;Dbxref=GeneID:7148982;gbkey=Gene;gene=ybgA;locus_tag=EC55989_0690
NC_011748.1	RefSeq	CDS	753466	753975	.	+	0	ID=cds653;Name=YP_002401797.1;Parent=gene703;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 6325460%2C 8387990;Dbxref=Genbank:YP_002401797.1,GeneID:7148982;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401797.1;transl_table=11
NC_011748.1	RefSeq	gene	753972	755390	.	+	.	ID=gene704;Name=phr;Dbxref=GeneID:7148171;gbkey=Gene;gene=phr;locus_tag=EC55989_0691
NC_011748.1	RefSeq	CDS	753972	755390	.	+	0	ID=cds654;Name=YP_002401798.1;Parent=gene704;Note=UV-induced DNA repair%3B converts cyclobutane-type pyrimidine dimers created during exposure to UV ratiation to monomers%3B light dependent;Dbxref=Genbank:YP_002401798.1,GeneID:7148171;gbkey=CDS;product=deoxyribodipyrimidine photolyase;protein_id=YP_002401798.1;transl_table=11
NC_011748.1	RefSeq	gene	755432	756913	.	-	.	ID=gene705;Name=ybgH;Dbxref=GeneID:7147189;gbkey=Gene;gene=ybgH;locus_tag=EC55989_0692
NC_011748.1	RefSeq	CDS	755432	756913	.	-	0	ID=cds655;Name=YP_002401799.1;Parent=gene705;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 15175316%3B Product type pt :  transporter;Dbxref=Genbank:YP_002401799.1,GeneID:7147189;gbkey=CDS;product=transporter;protein_id=YP_002401799.1;transl_table=11
NC_011748.1	RefSeq	gene	757184	757927	.	+	.	ID=gene706;Name=ybgI;Dbxref=GeneID:7148175;gbkey=Gene;gene=ybgI;locus_tag=EC55989_0693
NC_011748.1	RefSeq	CDS	757184	757927	.	+	0	ID=cds656;Name=YP_002401800.1;Parent=gene706;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 14519207;Dbxref=Genbank:YP_002401800.1,GeneID:7148175;gbkey=CDS;product=hydrolase-oxidase;protein_id=YP_002401800.1;transl_table=11
NC_011748.1	RefSeq	gene	757950	758606	.	+	.	ID=gene707;Name=ybgJ;Dbxref=GeneID:7148176;gbkey=Gene;gene=ybgJ;locus_tag=EC55989_0694
NC_011748.1	RefSeq	CDS	757950	758606	.	+	0	ID=cds657;Name=YP_002401801.1;Parent=gene707;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002401801.1,GeneID:7148176;gbkey=CDS;product=hydrolase subunit;protein_id=YP_002401801.1;transl_table=11
NC_011748.1	RefSeq	gene	758600	759532	.	+	.	ID=gene708;Name=ybgK;Dbxref=GeneID:7148177;gbkey=Gene;gene=ybgK;locus_tag=EC55989_0695
NC_011748.1	RefSeq	CDS	758600	759532	.	+	0	ID=cds658;Name=YP_002401802.1;Parent=gene708;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002401802.1,GeneID:7148177;gbkey=CDS;product=hydrolase subunit;protein_id=YP_002401802.1;transl_table=11
NC_011748.1	RefSeq	gene	759522	760256	.	+	.	ID=gene709;Name=ybgL;Dbxref=GeneID:7148178;gbkey=Gene;gene=ybgL;locus_tag=EC55989_0696
NC_011748.1	RefSeq	CDS	759522	760256	.	+	0	ID=cds659;Name=YP_002401803.1;Parent=gene709;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 1729609%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002401803.1,GeneID:7148178;gbkey=CDS;product=LamB%2FYcsF family protein;protein_id=YP_002401803.1;transl_table=11
NC_011748.1	RefSeq	gene	760292	761083	.	+	.	ID=gene710;Name=nei;Dbxref=GeneID:7148179;gbkey=Gene;gene=nei;locus_tag=EC55989_0697
NC_011748.1	RefSeq	CDS	760292	761083	.	+	0	ID=cds660;Name=YP_002401804.1;Parent=gene710;Note=5-formyluracil%2F5-hydroxymethyluracil DNA glycosylase%3B involved in base excision repair of DNA damaged by oxidation or by mutagenic agents%3B acts as DNA glycosylase that recognizes and removes damaged bases with a preference for oxidized pyrimidines%3B has apurinic%2Fapyrimidinic lyase activity;Dbxref=Genbank:YP_002401804.1,GeneID:7148179;gbkey=CDS;product=endonuclease VIII;protein_id=YP_002401804.1;transl_table=11
NC_011748.1	RefSeq	gene	761080	762126	.	-	.	ID=gene711;Name=abrB;Dbxref=GeneID:7146983;gbkey=Gene;gene=abrB;locus_tag=EC55989_0698
NC_011748.1	RefSeq	CDS	761080	762126	.	-	0	ID=cds661;Name=YP_002401805.1;Parent=gene711;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 8002588%3B Product type ph : phenotype;Dbxref=Genbank:YP_002401805.1,GeneID:7146983;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401805.1;transl_table=11
NC_011748.1	RefSeq	gene	762278	763339	.	-	.	ID=gene712;Name=ybgO;Dbxref=GeneID:7145427;gbkey=Gene;gene=ybgO;locus_tag=EC55989_0699
NC_011748.1	RefSeq	CDS	762278	763339	.	-	0	ID=cds662;Name=YP_002401806.1;Parent=gene712;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002401806.1,GeneID:7145427;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401806.1;transl_table=11
NC_011748.1	RefSeq	gene	763336	764091	.	-	.	ID=gene713;Name=ybgP;Dbxref=GeneID:7148180;gbkey=Gene;gene=ybgP;locus_tag=EC55989_0700
NC_011748.1	RefSeq	CDS	763336	764091	.	-	0	ID=cds663;Name=YP_002401807.1;Parent=gene713;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 10049807%3B Product type pf :  factor;Dbxref=Genbank:YP_002401807.1,GeneID:7148180;gbkey=CDS;product=chaperone%2C PapD family;protein_id=YP_002401807.1;transl_table=11
NC_011748.1	RefSeq	gene	764082	766583	.	-	.	ID=gene714;Name=ybgQ;Dbxref=GeneID:7148181;gbkey=Gene;gene=ybgQ;locus_tag=EC55989_0701
NC_011748.1	RefSeq	CDS	764082	766583	.	-	0	ID=cds664;Name=YP_002401808.1;Parent=gene714;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002401808.1,GeneID:7148181;gbkey=CDS;product=outer membrane protein;protein_id=YP_002401808.1;transl_table=11
NC_011748.1	RefSeq	gene	766592	767158	.	-	.	ID=gene715;Name=EC55989_0702;Dbxref=GeneID:7148182;gbkey=Gene;locus_tag=EC55989_0702
NC_011748.1	RefSeq	CDS	766592	767158	.	-	0	ID=cds665;Name=YP_002401809.1;Parent=gene715;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pf :  factor;Dbxref=Genbank:YP_002401809.1,GeneID:7148182;gbkey=CDS;product=fimbrial-like adhesin protein;protein_id=YP_002401809.1;transl_table=11
NC_011748.1	RefSeq	gene	767548	768831	.	-	.	ID=gene716;Name=gltA;Dbxref=GeneID:7144440;gbkey=Gene;gene=gltA;locus_tag=EC55989_0703
NC_011748.1	RefSeq	CDS	767548	768831	.	-	0	ID=cds666;Name=YP_002401810.1;Parent=gene716;Note=type II enzyme%3B in Escherichia coli this enzyme forms a trimer of dimers which is allosterically inhibited by NADH and competitively inhibited by alpha-ketoglutarate%3B allosteric inhibition is lost when Cys206 is chemically modified which also affects hexamer formation%3B forms oxaloacetate and acetyl-CoA and water from citrate and coenzyme A%3B functions in TCA cycle%2C glyoxylate cycle and respiration%3B enzyme from Helicobacter pylori is not inhibited by NADH;Dbxref=Genbank:YP_002401810.1,GeneID:7144440;gbkey=CDS;product=type II citrate synthase;protein_id=YP_002401810.1;transl_table=11
NC_011748.1	RefSeq	gene	769037	769195	.	-	.	ID=gene717;Name=EC55989_0704;Dbxref=GeneID:7146327;gbkey=Gene;locus_tag=EC55989_0704
NC_011748.1	RefSeq	CDS	769037	769195	.	-	0	ID=cds667;Name=YP_002401811.1;Parent=gene717;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002401811.1,GeneID:7146327;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401811.1;transl_table=11
NC_011748.1	RefSeq	gene	769540	769929	.	+	.	ID=gene718;Name=sdhC;Dbxref=GeneID:7144441;gbkey=Gene;gene=sdhC;locus_tag=EC55989_0705
NC_011748.1	RefSeq	CDS	769540	769929	.	+	0	ID=cds668;Name=YP_002401812.1;Parent=gene718;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 6237244%2C 89076355%2C 89123360%2C 9521736%2C 99414342%2C 11259408%2C 3309132%2C 6383359%2C 9822661%3B Product type m : membrane component;Dbxref=Genbank:YP_002401812.1,GeneID:7144441;gbkey=CDS;product=succinate dehydrogenase cytochrome b556 large membrane subunit;protein_id=YP_002401812.1;transl_table=11
NC_011748.1	RefSeq	gene	769923	770270	.	+	.	ID=gene719;Name=sdhD;Dbxref=GeneID:7147617;gbkey=Gene;gene=sdhD;locus_tag=EC55989_0706
NC_011748.1	RefSeq	CDS	769923	770270	.	+	0	ID=cds669;Name=YP_002401813.1;Parent=gene719;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 82124790%2C 89076355%2C 9521736%2C 99414342%2C 6383359%3B Product type m : membrane component;Dbxref=Genbank:YP_002401813.1,GeneID:7147617;gbkey=CDS;product=succinate dehydrogenase cytochrome b556 small membrane subunit;protein_id=YP_002401813.1;transl_table=11
NC_011748.1	RefSeq	gene	770270	772036	.	+	.	ID=gene720;Name=sdhA;Dbxref=GeneID:7147618;gbkey=Gene;gene=sdhA;locus_tag=EC55989_0707
NC_011748.1	RefSeq	CDS	770270	772036	.	+	0	ID=cds670;Name=YP_002401814.1;Parent=gene720;Note=part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex %28trimer of tetramers%29%3B SdhA%2FB are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC%2FD which are the membrane components and form cytochrome b556%3B SdhC binds ubiquinone%3B oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol;Dbxref=Genbank:YP_002401814.1,GeneID:7147618;gbkey=CDS;product=succinate dehydrogenase flavoprotein subunit;protein_id=YP_002401814.1;transl_table=11
NC_011748.1	RefSeq	gene	772052	772768	.	+	.	ID=gene721;Name=sdhB;Dbxref=GeneID:7147615;gbkey=Gene;gene=sdhB;locus_tag=EC55989_0708
NC_011748.1	RefSeq	CDS	772052	772768	.	+	0	ID=cds671;Name=YP_002401815.1;Parent=gene721;Note=part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex %28trimer of tetramers%29%3B SdhA%2FB are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC%2FD which are the membrane components and form cytochrome b556%3B SdhC binds ubiquinone%3B oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol%3B the catalytic subunits are similar to fumarate reductase;Dbxref=Genbank:YP_002401815.1,GeneID:7147615;gbkey=CDS;product=succinate dehydrogenase iron-sulfur subunit;protein_id=YP_002401815.1;transl_table=11
NC_011748.1	RefSeq	gene	772969	775770	.	+	.	ID=gene722;Name=sucA;Dbxref=GeneID:7147616;gbkey=Gene;gene=sucA;locus_tag=EC55989_0709
NC_011748.1	RefSeq	CDS	772969	775770	.	+	0	ID=cds672;Name=YP_002401816.1;Parent=gene722;Note=SucA%3B E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate%3B SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide;Dbxref=Genbank:YP_002401816.1,GeneID:7147616;gbkey=CDS;product=2-oxoglutarate dehydrogenase E1;protein_id=YP_002401816.1;transl_table=11
NC_011748.1	RefSeq	gene	775785	777002	.	+	.	ID=gene723;Name=sucB;Dbxref=GeneID:7147726;gbkey=Gene;gene=sucB;locus_tag=EC55989_0710
NC_011748.1	RefSeq	CDS	775785	777002	.	+	0	ID=cds673;Name=YP_002401817.1;Parent=gene723;Note=component of 2-oxoglutarate dehydrogenase complex%3B catalyzes the transfer of succinyl coenzyme A to form succinyl CoA as part of the conversion of 2-oxoglutarate to succinyl-CoA;Dbxref=Genbank:YP_002401817.1,GeneID:7147726;gbkey=CDS;product=dihydrolipoamide succinyltransferase;protein_id=YP_002401817.1;transl_table=11
NC_011748.1	RefSeq	gene	777096	778262	.	+	.	ID=gene724;Name=sucC;Dbxref=GeneID:7147727;gbkey=Gene;gene=sucC;locus_tag=EC55989_0711
NC_011748.1	RefSeq	CDS	777096	778262	.	+	0	ID=cds674;Name=YP_002401818.1;Parent=gene724;Note=catalyzes the interconversion of succinyl-CoA and succinate;Dbxref=Genbank:YP_002401818.1,GeneID:7147727;gbkey=CDS;product=succinyl-CoA synthetase subunit beta;protein_id=YP_002401818.1;transl_table=11
NC_011748.1	RefSeq	gene	778262	779131	.	+	.	ID=gene725;Name=sucD;Dbxref=GeneID:7147728;gbkey=Gene;gene=sucD;locus_tag=EC55989_0712
NC_011748.1	RefSeq	CDS	778262	779131	.	+	0	ID=cds675;Name=YP_002401819.1;Parent=gene725;Note=Catalyzes the only substrate-level phosphorylation in the TCA cycle;Dbxref=Genbank:YP_002401819.1,GeneID:7147728;gbkey=CDS;product=succinyl-CoA synthetase subunit alpha;protein_id=YP_002401819.1;transl_table=11
NC_011748.1	RefSeq	gene	779132	779232	.	+	.	ID=gene726;Name=rybD;Dbxref=GeneID:7147729;gbkey=Gene;gene=rybD;locus_tag=EC55989_misc_RNA_17
NC_011748.1	RefSeq	transcript	779132	779232	.	+	.	ID=rna33;Parent=gene726;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 14622403%3B Product type n : RNA;Dbxref=GeneID:7147729;gbkey=misc_RNA;product=RybD
NC_011748.1	RefSeq	exon	779132	779232	.	+	.	ID=id60;Parent=rna33;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 14622403%3B Product type n : RNA;Dbxref=GeneID:7147729;gbkey=misc_RNA;product=RybD
NC_011748.1	RefSeq	gene	779235	779957	.	-	.	ID=gene727;Name=mngR;Dbxref=GeneID:7147575;gbkey=Gene;gene=mngR;locus_tag=EC55989_0713
NC_011748.1	RefSeq	CDS	779235	779957	.	-	0	ID=cds676;Name=YP_002401820.1;Parent=gene727;Note=regulates the succiny-lCoA synthetase operon;Dbxref=Genbank:YP_002401820.1,GeneID:7147575;gbkey=CDS;product=DNA-binding transcriptional repressor MngR;protein_id=YP_002401820.1;transl_table=11
NC_011748.1	RefSeq	gene	780066	782042	.	+	.	ID=gene728;Name=mngA;Dbxref=GeneID:7146869;gbkey=Gene;gene=mngA;locus_tag=EC55989_0714
NC_011748.1	RefSeq	CDS	780066	782042	.	+	0	ID=cds677;Name=YP_002401821.1;Parent=gene728;Note=involved in the phosphorylation and transport of sugars across the cell membrane%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel for the sugar uptake;Dbxref=Genbank:YP_002401821.1,GeneID:7146869;gbkey=CDS;product=PTS system 2-O-a-mannosyl-D-glycerate specific transporter subunit IIABC;protein_id=YP_002401821.1;transl_table=11
NC_011748.1	RefSeq	gene	782060	784693	.	+	.	ID=gene729;Name=mngB;Dbxref=GeneID:7146867;gbkey=Gene;gene=mngB;locus_tag=EC55989_0715
NC_011748.1	RefSeq	CDS	782060	784693	.	+	0	ID=cds678;Name=YP_002401822.1;Parent=gene729;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 14645248%2C 9063979%3B Product type e : enzyme;Dbxref=Genbank:YP_002401822.1,GeneID:7146867;gbkey=CDS;product=alpha-mannosidase;protein_id=YP_002401822.1;transl_table=11
NC_011748.1	RefSeq	gene	784718	784945	.	+	.	ID=gene730;Name=EC55989_0716;Dbxref=GeneID:7146868;gbkey=Gene;locus_tag=EC55989_0716
NC_011748.1	RefSeq	CDS	784718	784945	.	+	0	ID=cds679;Name=YP_002401823.1;Parent=gene730;Note=Evidence 6 : Doubtful CDS;Dbxref=Genbank:YP_002401823.1,GeneID:7146868;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401823.1;transl_table=11
NC_011748.1	RefSeq	gene	785540	787108	.	+	.	ID=gene731;Name=cydA;Dbxref=GeneID:7144442;gbkey=Gene;gene=cydA;locus_tag=EC55989_0718
NC_011748.1	RefSeq	CDS	785540	787108	.	+	0	ID=cds680;Name=YP_002401824.1;Parent=gene731;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 87299685%2C 89255232%2C 91035243%2C 1689724%2C 1724280%2C 2843510%2C 3138232%3B Product type c : carrier;Dbxref=Genbank:YP_002401824.1,GeneID:7144442;gbkey=CDS;product=cytochrome d terminal oxidase%2C subunit I;protein_id=YP_002401824.1;transl_table=11
NC_011748.1	RefSeq	gene	787124	788263	.	+	.	ID=gene732;Name=cydB;Dbxref=GeneID:7145807;gbkey=Gene;gene=cydB;locus_tag=EC55989_0719
NC_011748.1	RefSeq	CDS	787124	788263	.	+	0	ID=cds681;Name=YP_002401825.1;Parent=gene732;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 87299685%2C 89255232%2C 91035243%2C 2843510%2C 3138232%3B Product type c : carrier;Dbxref=Genbank:YP_002401825.1,GeneID:7145807;gbkey=CDS;product=cytochrome d terminal oxidase%2C subunit II;protein_id=YP_002401825.1;transl_table=11
NC_011748.1	RefSeq	gene	788391	788684	.	+	.	ID=gene733;Name=ybgE;Dbxref=GeneID:7145808;gbkey=Gene;gene=ybgE;locus_tag=EC55989_0720
NC_011748.1	RefSeq	CDS	788391	788684	.	+	0	ID=cds682;Name=YP_002401826.1;Parent=gene733;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002401826.1,GeneID:7145808;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401826.1;transl_table=11
NC_011748.1	RefSeq	gene	788834	789238	.	+	.	ID=gene734;Name=ybgC;Dbxref=GeneID:7148173;gbkey=Gene;gene=ybgC;locus_tag=EC55989_0721
NC_011748.1	RefSeq	CDS	788834	789238	.	+	0	ID=cds683;Name=YP_002401827.1;Parent=gene734;Note=catalyzes the hydrolysis of short chain aliphatic acyl-CoA thioesters%3B physiological role remains unknown%3B involved in phospholipid metabolism%3B part of the Tol%2FPal system of proteins that are critical for maintaining the integrity of the cell envelope components;Dbxref=Genbank:YP_002401827.1,GeneID:7148173;gbkey=CDS;product=acyl-CoA thioester hydrolase;protein_id=YP_002401827.1;transl_table=11
NC_011748.1	RefSeq	gene	789235	789927	.	+	.	ID=gene735;Name=tolQ;Dbxref=GeneID:7148172;gbkey=Gene;gene=tolQ;locus_tag=EC55989_0722
NC_011748.1	RefSeq	CDS	789235	789927	.	+	0	ID=cds684;Name=YP_002401828.1;Parent=gene735;Note=membrane spanning protein in TolA-TolQ-TolR complex%3B involved in the tonB-independent uptake of group A colicins;Dbxref=Genbank:YP_002401828.1,GeneID:7148172;gbkey=CDS;product=colicin uptake protein TolQ;protein_id=YP_002401828.1;transl_table=11
NC_011748.1	RefSeq	gene	789931	790359	.	+	.	ID=gene736;Name=tolR;Dbxref=GeneID:7147815;gbkey=Gene;gene=tolR;locus_tag=EC55989_0723
NC_011748.1	RefSeq	CDS	789931	790359	.	+	0	ID=cds685;Name=YP_002401829.1;Parent=gene736;Note=membrane spanning protein in TolA-TolQ-TolR complex%3B involved in the tonB-independent uptake of group A colicins;Dbxref=Genbank:YP_002401829.1,GeneID:7147815;gbkey=CDS;product=colicin uptake protein TolR;protein_id=YP_002401829.1;transl_table=11
NC_011748.1	RefSeq	gene	790424	791689	.	+	.	ID=gene737;Name=tolA;Dbxref=GeneID:7147816;gbkey=Gene;gene=tolA;locus_tag=EC55989_0724
NC_011748.1	RefSeq	CDS	790424	791689	.	+	0	ID=cds686;Name=YP_002401830.1;Parent=gene737;Note=inner membrane component of 7 member Tol-Pal envelope-spanning complex%3B involved in maintaining cell envelope integrity%3B utilized by colicins and filamentous phages for import%3B interacts with TolB%2C Pal%2C and through TolB to various outer membrane porins;Dbxref=Genbank:YP_002401830.1,GeneID:7147816;gbkey=CDS;product=cell envelope integrity inner membrane protein TolA;protein_id=YP_002401830.1;transl_table=11
NC_011748.1	RefSeq	gene	791822	793114	.	+	.	ID=gene738;Name=tolB;Dbxref=GeneID:7147811;gbkey=Gene;gene=tolB;locus_tag=EC55989_0725
NC_011748.1	RefSeq	CDS	791822	793114	.	+	0	ID=cds687;Name=YP_002401831.1;Parent=gene738;Note=forms dimers%3B may be involved in cell envelope integrity%3B interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA;Dbxref=Genbank:YP_002401831.1,GeneID:7147811;gbkey=CDS;product=translocation protein TolB;protein_id=YP_002401831.1;transl_table=11
NC_011748.1	RefSeq	gene	793149	793670	.	+	.	ID=gene739;Name=pal;Dbxref=GeneID:7147813;gbkey=Gene;gene=pal;locus_tag=EC55989_0726
NC_011748.1	RefSeq	CDS	793149	793670	.	+	0	ID=cds688;Name=YP_002401832.1;Parent=gene739;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 11790745%2C 87133578%2C 92244043%2C 99403391%2C 11173492%2C 2687247%3B Product type lp : lipoprotein;Dbxref=Genbank:YP_002401832.1,GeneID:7147813;gbkey=CDS;product=peptidoglycan-associated outer membrane lipoprotein;protein_id=YP_002401832.1;transl_table=11
NC_011748.1	RefSeq	gene	793680	794471	.	+	.	ID=gene740;Name=ybgF;Dbxref=GeneID:7147109;gbkey=Gene;gene=ybgF;locus_tag=EC55989_0727
NC_011748.1	RefSeq	CDS	793680	794471	.	+	0	ID=cds689;Name=YP_002401833.1;Parent=gene740;Note=periplasmic protein that interacts with TolA%3B the tol-pal system is probably involved in maintaining cell envelope integrity;Dbxref=Genbank:YP_002401833.1,GeneID:7147109;gbkey=CDS;product=tol-pal system protein YbgF;protein_id=YP_002401833.1;transl_table=11
NC_011748.1	RefSeq	gene	794636	794711	.	+	.	ID=gene741;Name=EC55989_tRNA8;Dbxref=GeneID:7148174;gbkey=Gene;locus_tag=EC55989_tRNA8
NC_011748.1	RefSeq	tRNA	794636	794711	.	+	.	ID=rna34;Dbxref=GeneID:7148174;gbkey=tRNA;product=tRNA-Lys
NC_011748.1	RefSeq	exon	794636	794711	.	+	.	ID=id61;Parent=rna34;Dbxref=GeneID:7148174;gbkey=tRNA;product=tRNA-Lys
NC_011748.1	RefSeq	gene	794747	794822	.	+	.	ID=gene742;Name=EC55989_tRNA9;Dbxref=GeneID:7145394;gbkey=Gene;locus_tag=EC55989_tRNA9
NC_011748.1	RefSeq	tRNA	794747	794822	.	+	.	ID=rna35;Dbxref=GeneID:7145394;gbkey=tRNA;product=tRNA-Val
NC_011748.1	RefSeq	exon	794747	794822	.	+	.	ID=id62;Parent=rna35;Dbxref=GeneID:7145394;gbkey=tRNA;product=tRNA-Val
NC_011748.1	RefSeq	gene	794825	794900	.	+	.	ID=gene743;Name=EC55989_tRNA10;Dbxref=GeneID:7145405;gbkey=Gene;locus_tag=EC55989_tRNA10
NC_011748.1	RefSeq	tRNA	794825	794900	.	+	.	ID=rna36;Dbxref=GeneID:7145405;gbkey=tRNA;product=tRNA-Lys
NC_011748.1	RefSeq	exon	794825	794900	.	+	.	ID=id63;Parent=rna36;Dbxref=GeneID:7145405;gbkey=tRNA;product=tRNA-Lys
NC_011748.1	RefSeq	gene	795050	795125	.	+	.	ID=gene744;Name=EC55989_tRNA11;Dbxref=GeneID:7145318;gbkey=Gene;locus_tag=EC55989_tRNA11
NC_011748.1	RefSeq	tRNA	795050	795125	.	+	.	ID=rna37;Dbxref=GeneID:7145318;gbkey=tRNA;product=tRNA-Val
NC_011748.1	RefSeq	exon	795050	795125	.	+	.	ID=id64;Parent=rna37;Dbxref=GeneID:7145318;gbkey=tRNA;product=tRNA-Val
NC_011748.1	RefSeq	gene	795129	795204	.	+	.	ID=gene745;Name=EC55989_tRNA12;Dbxref=GeneID:7145319;gbkey=Gene;locus_tag=EC55989_tRNA12
NC_011748.1	RefSeq	tRNA	795129	795204	.	+	.	ID=rna38;Dbxref=GeneID:7145319;gbkey=tRNA;product=tRNA-Lys
NC_011748.1	RefSeq	exon	795129	795204	.	+	.	ID=id65;Parent=rna38;Dbxref=GeneID:7145319;gbkey=tRNA;product=tRNA-Lys
NC_011748.1	RefSeq	gene	795351	795426	.	+	.	ID=gene746;Name=EC55989_tRNA13;Dbxref=GeneID:7145320;gbkey=Gene;locus_tag=EC55989_tRNA13
NC_011748.1	RefSeq	tRNA	795351	795426	.	+	.	ID=rna39;Dbxref=GeneID:7145320;gbkey=tRNA;product=tRNA-Lys
NC_011748.1	RefSeq	exon	795351	795426	.	+	.	ID=id66;Parent=rna39;Dbxref=GeneID:7145320;gbkey=tRNA;product=tRNA-Lys
NC_011748.1	RefSeq	gene	795460	795535	.	+	.	ID=gene747;Name=EC55989_tRNA14;Dbxref=GeneID:7145321;gbkey=Gene;locus_tag=EC55989_tRNA14
NC_011748.1	RefSeq	tRNA	795460	795535	.	+	.	ID=rna40;Dbxref=GeneID:7145321;gbkey=tRNA;product=tRNA-Lys
NC_011748.1	RefSeq	exon	795460	795535	.	+	.	ID=id67;Parent=rna40;Dbxref=GeneID:7145321;gbkey=tRNA;product=tRNA-Lys
NC_011748.1	RefSeq	gene	795940	796983	.	+	.	ID=gene748;Name=nadA;Dbxref=GeneID:7145322;gbkey=Gene;gene=nadA;locus_tag=EC55989_0729
NC_011748.1	RefSeq	CDS	795940	796983	.	+	0	ID=cds690;Name=YP_002401834.1;Parent=gene748;Note=3 different subfamilies%3B catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate;Dbxref=Genbank:YP_002401834.1,GeneID:7145322;gbkey=CDS;product=quinolinate synthetase;protein_id=YP_002401834.1;transl_table=11
NC_011748.1	RefSeq	gene	797021	797740	.	+	.	ID=gene749;Name=pnuC;Dbxref=GeneID:7146942;gbkey=Gene;gene=pnuC;locus_tag=EC55989_0730
NC_011748.1	RefSeq	CDS	797021	797740	.	+	0	ID=cds691;Name=YP_002401835.1;Parent=gene749;Note=Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism%3B PubMedId : 219824%2C 90330519%3B Product type t : transporter;Dbxref=Genbank:YP_002401835.1,GeneID:7146942;gbkey=CDS;product=nicotinamide mononucleotide transporter;protein_id=YP_002401835.1;transl_table=11
NC_011748.1	RefSeq	gene	797737	798678	.	-	.	ID=gene750;Name=zitB;Dbxref=GeneID:7147206;gbkey=Gene;gene=zitB;locus_tag=EC55989_0731
NC_011748.1	RefSeq	CDS	797737	798678	.	-	0	ID=cds692;Name=YP_002401836.1;Parent=gene750;Note=involved in zinc efflux across the cytoplasmic membrane;Dbxref=Genbank:YP_002401836.1,GeneID:7147206;gbkey=CDS;product=zinc transporter ZitB;protein_id=YP_002401836.1;transl_table=11
NC_011748.1	RefSeq	gene	798792	799172	.	-	.	ID=gene751;Name=ybgS;Dbxref=GeneID:7149489;gbkey=Gene;gene=ybgS;locus_tag=EC55989_0732
NC_011748.1	RefSeq	CDS	798792	799172	.	-	0	ID=cds693;Name=YP_002401837.1;Parent=gene751;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002401837.1,GeneID:7149489;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401837.1;transl_table=11
NC_011748.1	RefSeq	gene	799488	800540	.	+	.	ID=gene752;Name=aroG;Dbxref=GeneID:7148183;gbkey=Gene;gene=aroG;locus_tag=EC55989_0733
NC_011748.1	RefSeq	CDS	799488	800540	.	+	0	ID=cds694;Name=YP_002401838.1;Parent=gene752;Note=catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate%2C phenylalanine sensitive;Dbxref=Genbank:YP_002401838.1,GeneID:7148183;gbkey=CDS;product=phospho-2-dehydro-3-deoxyheptonate aldolase;protein_id=YP_002401838.1;transl_table=11
NC_011748.1	RefSeq	gene	800698	801450	.	-	.	ID=gene753;Name=gpmA;Dbxref=GeneID:7145545;gbkey=Gene;gene=gpmA;locus_tag=EC55989_0734
NC_011748.1	RefSeq	CDS	800698	801450	.	-	0	ID=cds695;Name=YP_002401839.1;Parent=gene753;Note=2%2C3-bisphosphoglycerate-dependent%3B catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate;Dbxref=Genbank:YP_002401839.1,GeneID:7145545;gbkey=CDS;product=phosphoglyceromutase;protein_id=YP_002401839.1;transl_table=11
NC_011748.1	RefSeq	gene	801655	802695	.	-	.	ID=gene754;Name=galM;Dbxref=GeneID:7146360;gbkey=Gene;gene=galM;locus_tag=EC55989_0735
NC_011748.1	RefSeq	CDS	801655	802695	.	-	0	ID=cds696;Name=YP_002401840.1;Parent=gene754;Note=catalyzes the conversion of alpha-aldose to the beta-anomer%3B active on D-glucose%2C L-arabinose%2C D-xylose%2C D-galactose%2C maltose and lactose%3B links the metabolism of lactose and galactose;Dbxref=Genbank:YP_002401840.1,GeneID:7146360;gbkey=CDS;product=aldose 1-epimerase;protein_id=YP_002401840.1;transl_table=11
NC_011748.1	RefSeq	gene	802689	803837	.	-	.	ID=gene755;Name=galK;Dbxref=GeneID:7146250;gbkey=Gene;gene=galK;locus_tag=EC55989_0736
NC_011748.1	RefSeq	CDS	802689	803837	.	-	0	ID=cds697;Name=YP_002401841.1;Parent=gene755;Note=catalyzes the formation of alpha-D-galactose 1-phosphate from D-galactose in galactose metabolism;Dbxref=Genbank:YP_002401841.1,GeneID:7146250;gbkey=CDS;product=galactokinase;protein_id=YP_002401841.1;transl_table=11
NC_011748.1	RefSeq	gene	803841	804887	.	-	.	ID=gene756;Name=galT;Dbxref=GeneID:7146249;gbkey=Gene;gene=galT;locus_tag=EC55989_0737
NC_011748.1	RefSeq	CDS	803841	804887	.	-	0	ID=cds698;Name=YP_002401842.1;Parent=gene756;Note=catalyzes the interconversion of UDP-galactose and galactose-1-P with UDP-galactose and glucose-1-P;Dbxref=Genbank:YP_002401842.1,GeneID:7146249;gbkey=CDS;product=galactose-1-phosphate uridylyltransferase;protein_id=YP_002401842.1;transl_table=11
NC_011748.1	RefSeq	gene	804897	805913	.	-	.	ID=gene757;Name=galE;Dbxref=GeneID:7146254;gbkey=Gene;gene=galE;locus_tag=EC55989_0738
NC_011748.1	RefSeq	CDS	804897	805913	.	-	0	ID=cds699;Name=YP_002401843.1;Parent=gene757;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 89274199%2C 92253563%2C 92338916%2C 3022232%2C 6301942%2C 8564363%2C 8611559%2C 8931134%2C 9174344%2C 9271499%2C 9708982%3B Product type e : enzyme;Dbxref=Genbank:YP_002401843.1,GeneID:7146254;gbkey=CDS;product=UDP-galactose-4-epimerase;protein_id=YP_002401843.1;transl_table=11
NC_011748.1	RefSeq	gene	806174	807646	.	-	.	ID=gene758;Name=modF;Dbxref=GeneID:7146247;gbkey=Gene;gene=modF;locus_tag=EC55989_0739
NC_011748.1	RefSeq	CDS	806174	807646	.	-	0	ID=cds700;Name=YP_002401844.1;Parent=gene758;Note=contains 2 ATP-binding cassettes%3B involved in the transport of molybdenum;Dbxref=Genbank:YP_002401844.1,GeneID:7146247;gbkey=CDS;product=molybdenum transport ATP-binding protein ModF;protein_id=YP_002401844.1;transl_table=11
NC_011748.1	RefSeq	gene	807574	807720	.	-	.	ID=gene759;Name=EC55989_0740;Dbxref=GeneID:7146883;gbkey=Gene;locus_tag=EC55989_0740
NC_011748.1	RefSeq	CDS	807574	807720	.	-	0	ID=cds701;Name=YP_002401845.1;Parent=gene759;Note=Evidence 6 : Doubtful CDS;Dbxref=Genbank:YP_002401845.1,GeneID:7146883;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401845.1;transl_table=11
NC_011748.1	RefSeq	gene	807714	808502	.	-	.	ID=gene760;Name=modE;Dbxref=GeneID:7144443;gbkey=Gene;gene=modE;locus_tag=EC55989_0741
NC_011748.1	RefSeq	CDS	807714	808502	.	-	0	ID=cds702;Name=YP_002401846.1;Parent=gene760;Note=represses the modABCD operon and activates the moaABCD and napFDAGHBC operons;Dbxref=Genbank:YP_002401846.1,GeneID:7144443;gbkey=CDS;product=DNA-binding transcriptional regulator ModE;protein_id=YP_002401846.1;transl_table=11
NC_011748.1	RefSeq	gene	808631	808780	.	+	.	ID=gene761;Name=ybhT;Dbxref=GeneID:7146882;gbkey=Gene;gene=ybhT;locus_tag=EC55989_0742
NC_011748.1	RefSeq	CDS	808631	808780	.	+	0	ID=cds703;Name=YP_002401847.1;Parent=gene761;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002401847.1,GeneID:7146882;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401847.1;transl_table=11
NC_011748.1	RefSeq	gene	808947	809720	.	+	.	ID=gene762;Name=modA;Dbxref=GeneID:7148202;gbkey=Gene;gene=modA;locus_tag=EC55989_0743
NC_011748.1	RefSeq	CDS	808947	809720	.	+	0	ID=cds704;Name=YP_002401848.1;Parent=gene762;Note=with ModCB is involved in the high-affinity transport of molybdate;Dbxref=Genbank:YP_002401848.1,GeneID:7148202;gbkey=CDS;product=molybdate transporter periplasmic protein;protein_id=YP_002401848.1;transl_table=11
NC_011748.1	RefSeq	gene	809720	810409	.	+	.	ID=gene763;Name=modB;Dbxref=GeneID:7146879;gbkey=Gene;gene=modB;locus_tag=EC55989_0744
NC_011748.1	RefSeq	CDS	809720	810409	.	+	0	ID=cds705;Name=YP_002401849.1;Parent=gene763;Note=part of ModCBA molybdate transporter%3B member of ABC superfamily%3B inner membrane component%3B regulated by repressor protein ModE;Dbxref=Genbank:YP_002401849.1,GeneID:7146879;gbkey=CDS;product=molybdate ABC transporter permease;protein_id=YP_002401849.1;transl_table=11
NC_011748.1	RefSeq	gene	810412	811470	.	+	.	ID=gene764;Name=modC;Dbxref=GeneID:7146880;gbkey=Gene;gene=modC;locus_tag=EC55989_0745
NC_011748.1	RefSeq	CDS	810412	811470	.	+	0	ID=cds706;Name=YP_002401850.1;Parent=gene764;Note=Part of the ABC transporter complex modABC involved in molybdenum import;Dbxref=Genbank:YP_002401850.1,GeneID:7146880;gbkey=CDS;product=molybdate transporter ATP-binding protein;protein_id=YP_002401850.1;transl_table=11
NC_011748.1	RefSeq	gene	811471	812289	.	-	.	ID=gene765;Name=ybhA;Dbxref=GeneID:7146881;gbkey=Gene;gene=ybhA;locus_tag=EC55989_0746
NC_011748.1	RefSeq	CDS	811471	812289	.	-	0	ID=cds707;Name=YP_002401851.1;Parent=gene765;Note=YbhA%3B catalyzes the dephosphorylation of pyridoxal phosphate%2C fructose 1%2C6-bisphosphate%2C erythrose 4-phosphate and p-nitrophenyl phosphate%3B purine and pyrimidine nucleotides are secondary substrates%3B phosphotransferase activity observed when using monophosphates as phosphate donor%3B member of the haloacid dehalogenase-like hydrolases superfamily;Dbxref=Genbank:YP_002401851.1,GeneID:7146881;gbkey=CDS;product=phosphotransferase;protein_id=YP_002401851.1;transl_table=11
NC_011748.1	RefSeq	gene	812444	813439	.	+	.	ID=gene766;Name=pgl;Dbxref=GeneID:7148184;gbkey=Gene;gene=pgl;locus_tag=EC55989_0747
NC_011748.1	RefSeq	CDS	812444	813439	.	+	0	ID=cds708;Name=YP_002401852.1;Parent=gene766;Note=catalyzes the hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate;Dbxref=Genbank:YP_002401852.1,GeneID:7148184;gbkey=CDS;product=6-phosphogluconolactonase;protein_id=YP_002401852.1;transl_table=11
NC_011748.1	RefSeq	gene	813480	814196	.	-	.	ID=gene767;Name=ybhD;Dbxref=GeneID:7147152;gbkey=Gene;gene=ybhD;locus_tag=EC55989_0748;pseudo=true
NC_011748.1	RefSeq	region	813480	814196	.	-	.	ID=id68;Note=fragment of  DNA-binding transcriptional regulator %28partial%29%3BEvidence 7 : Gene remnant%3B Product type pr :  regulator;Dbxref=GeneID:7147152;gbkey=misc_feature
NC_011748.1	RefSeq	gene	814238	814513	.	+	.	ID=gene768;Name=insA;Dbxref=GeneID:7148187;gbkey=Gene;gene=insA;locus_tag=EC55989_0749
NC_011748.1	RefSeq	CDS	814238	814513	.	+	0	ID=cds709;Name=YP_002401853.1;Parent=gene768;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 9689094%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002401853.1,GeneID:7148187;gbkey=CDS;product=IS1 repressor protein InsA;protein_id=YP_002401853.1;transl_table=11
NC_011748.1	RefSeq	gene	814432	814935	.	+	.	ID=gene769;Name=insB;Dbxref=GeneID:7146570;gbkey=Gene;gene=insB;locus_tag=EC55989_0750
NC_011748.1	RefSeq	CDS	814432	814935	.	+	0	ID=cds710;Name=YP_002401854.1;Parent=gene769;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 9689094%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002401854.1,GeneID:7146570;gbkey=CDS;product=IS1 transposase InsAB%27;protein_id=YP_002401854.1;transl_table=11
NC_011748.1	RefSeq	gene	814968	815621	.	+	.	ID=gene770;Name=ybhH;Dbxref=GeneID:7146582;gbkey=Gene;gene=ybhH;locus_tag=EC55989_0751;pseudo=true
NC_011748.1	RefSeq	region	814968	815621	.	+	.	ID=id69;Note=fragment of conserved hypothetical protein %28partial%29%3BEvidence 7 : Gene remnant;Dbxref=GeneID:7146582;gbkey=misc_feature
NC_011748.1	RefSeq	gene	815697	817130	.	+	.	ID=gene771;Name=ybhI;Dbxref=GeneID:7148190;gbkey=Gene;gene=ybhI;locus_tag=EC55989_0752
NC_011748.1	RefSeq	CDS	815697	817130	.	+	0	ID=cds711;Name=YP_002401855.1;Parent=gene771;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002401855.1,GeneID:7148190;gbkey=CDS;product=anion transporter;protein_id=YP_002401855.1;transl_table=11
NC_011748.1	RefSeq	gene	817313	819574	.	+	.	ID=gene772;Name=ybhJ;Dbxref=GeneID:7148191;gbkey=Gene;gene=ybhJ;locus_tag=EC55989_0753
NC_011748.1	RefSeq	CDS	817313	819574	.	+	0	ID=cds712;Name=YP_002401856.1;Parent=gene772;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 11782506%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002401856.1,GeneID:7148191;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401856.1;transl_table=11
NC_011748.1	RefSeq	gene	819808	821091	.	-	.	ID=gene773;Name=ybhC;Dbxref=GeneID:7148192;gbkey=Gene;gene=ybhC;locus_tag=EC55989_0754
NC_011748.1	RefSeq	CDS	819808	821091	.	-	0	ID=cds713;Name=YP_002401857.1;Parent=gene773;Note=outer membrane lipoprotein that catalyzes the hydrolysis of the thioester bond in palmitoyl-CoA%3B YbhC localizes to the cellular poles%3B member of pectinesterase family;Dbxref=Genbank:YP_002401857.1,GeneID:7148192;gbkey=CDS;product=pectinesterase;protein_id=YP_002401857.1;transl_table=11
NC_011748.1	RefSeq	gene	821226	822296	.	-	.	ID=gene774;Name=int;Dbxref=GeneID:7148186;gbkey=Gene;gene=int;locus_tag=EC55989_0755
NC_011748.1	RefSeq	CDS	821226	822296	.	-	0	ID=cds714;Name=YP_002401858.1;Parent=gene774;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 6446713%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002401858.1,GeneID:7148186;gbkey=CDS;product=Integrase from phage;protein_id=YP_002401858.1;transl_table=11
NC_011748.1	RefSeq	gene	822920	823123	.	+	.	ID=gene775;Name=EC55989_0757;Dbxref=GeneID:7146602;gbkey=Gene;locus_tag=EC55989_0757
NC_011748.1	RefSeq	CDS	822920	823123	.	+	0	ID=cds715;Name=YP_002401859.1;Parent=gene775;Dbxref=Genbank:YP_002401859.1,GeneID:7146602;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401859.1;transl_table=11
NC_011748.1	RefSeq	gene	823755	823976	.	-	.	ID=gene776;Name=EC55989_0758;Dbxref=GeneID:7144444;gbkey=Gene;locus_tag=EC55989_0758
NC_011748.1	RefSeq	CDS	823755	823976	.	-	0	ID=cds716;Name=YP_002401860.1;Parent=gene776;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002401860.1,GeneID:7144444;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401860.1;transl_table=11
NC_011748.1	RefSeq	gene	824075	824386	.	-	.	ID=gene777;Name=EC55989_0759;Dbxref=GeneID:7144445;gbkey=Gene;locus_tag=EC55989_0759
NC_011748.1	RefSeq	CDS	824075	824386	.	-	0	ID=cds717;Name=YP_002401861.1;Parent=gene777;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002401861.1,GeneID:7144445;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401861.1;transl_table=11
NC_011748.1	RefSeq	gene	824367	824558	.	-	.	ID=gene778;Name=EC55989_0761;Dbxref=GeneID:7144446;gbkey=Gene;locus_tag=EC55989_0761
NC_011748.1	RefSeq	CDS	824367	824558	.	-	0	ID=cds718;Name=YP_002401862.1;Parent=gene778;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002401862.1,GeneID:7144446;gbkey=CDS;product=phage protein;protein_id=YP_002401862.1;transl_table=11
NC_011748.1	RefSeq	gene	824710	825390	.	-	.	ID=gene779;Name=EC55989_0762;Dbxref=GeneID:7144447;gbkey=Gene;locus_tag=EC55989_0762
NC_011748.1	RefSeq	CDS	824710	825390	.	-	0	ID=cds719;Name=YP_002401863.1;Parent=gene779;Note=Evidence 2b : Function of strongly homologous gene%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002401863.1,GeneID:7144447;gbkey=CDS;product=exonuclease from phage origin;protein_id=YP_002401863.1;transl_table=11
NC_011748.1	RefSeq	gene	825387	826172	.	-	.	ID=gene780;Name=EC55989_0763;Dbxref=GeneID:7144448;gbkey=Gene;locus_tag=EC55989_0763
NC_011748.1	RefSeq	CDS	825387	826172	.	-	0	ID=cds720;Name=YP_002401864.1;Parent=gene780;Note=Evidence 2b : Function of strongly homologous gene%3B PubMedId : 6458018%2C 6221115%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002401864.1,GeneID:7144448;gbkey=CDS;product=Recombination protein bet from phage origin;protein_id=YP_002401864.1;transl_table=11
NC_011748.1	RefSeq	gene	826178	826474	.	-	.	ID=gene781;Name=EC55989_0764;Dbxref=GeneID:7144449;gbkey=Gene;locus_tag=EC55989_0764
NC_011748.1	RefSeq	CDS	826178	826474	.	-	0	ID=cds721;Name=YP_002401865.1;Parent=gene781;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002401865.1,GeneID:7144449;gbkey=CDS;product=host-nuclease inhibitor protein Gam of bacteriophage;protein_id=YP_002401865.1;transl_table=11
NC_011748.1	RefSeq	gene	826550	826840	.	-	.	ID=gene782;Name=EC55989_0765;Dbxref=GeneID:7144450;gbkey=Gene;locus_tag=EC55989_0765;pseudo=true
NC_011748.1	RefSeq	region	826550	826840	.	-	.	ID=id70;Note=fragment of  prophage Kil protein %28modular protein%29 %28partial%29%3BEvidence 7 : Gene remnant%3B Product type h : extrachromosomal origin;Dbxref=GeneID:7144450;gbkey=misc_feature
NC_011748.1	RefSeq	gene	827354	828109	.	-	.	ID=gene783;Name=EC55989_0766;Dbxref=GeneID:7144451;gbkey=Gene;locus_tag=EC55989_0766
NC_011748.1	RefSeq	CDS	827354	828109	.	-	0	ID=cds722;Name=YP_002401866.1;Parent=gene783;Note=Evidence 2b : Function of strongly homologous gene%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002401866.1,GeneID:7144451;gbkey=CDS;product=Regulatory protein CI from bacteriophage origin;protein_id=YP_002401866.1;transl_table=11
NC_011748.1	RefSeq	gene	828148	828378	.	+	.	ID=gene784;Name=cro;Dbxref=GeneID:7144452;gbkey=Gene;gene=cro;locus_tag=EC55989_0767
NC_011748.1	RefSeq	CDS	828148	828378	.	+	0	ID=cds723;Name=YP_002401867.1;Parent=gene784;Note=Evidence 2b : Function of strongly homologous gene%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002401867.1,GeneID:7144452;gbkey=CDS;product=Cro;protein_id=YP_002401867.1;transl_table=11
NC_011748.1	RefSeq	gene	828448	828987	.	+	.	ID=gene785;Name=EC55989_0768;Dbxref=GeneID:7145758;gbkey=Gene;locus_tag=EC55989_0768
NC_011748.1	RefSeq	CDS	828448	828987	.	+	0	ID=cds724;Name=YP_002401868.1;Parent=gene785;Note=Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism%3B PubMedId : 612476%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002401868.1,GeneID:7145758;gbkey=CDS;product=Regulatory protein CII %28modular protein%29 from bacteriophage origin%3B coiled-coil;protein_id=YP_002401868.1;transl_table=11
NC_011748.1	RefSeq	gene	828984	830003	.	+	.	ID=gene786;Name=EC55989_0769;Dbxref=GeneID:7144453;gbkey=Gene;locus_tag=EC55989_0769
NC_011748.1	RefSeq	CDS	828984	830003	.	+	0	ID=cds725;Name=YP_002401869.1;Parent=gene786;Note=Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism%3B PubMedId : 2995831%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002401869.1,GeneID:7144453;gbkey=CDS;product=Replication protein O frm phage origin;protein_id=YP_002401869.1;transl_table=11
NC_011748.1	RefSeq	gene	830000	830701	.	+	.	ID=gene787;Name=EC55989_0770;Dbxref=GeneID:7144454;gbkey=Gene;locus_tag=EC55989_0770
NC_011748.1	RefSeq	CDS	830000	830701	.	+	0	ID=cds726;Name=YP_002401870.1;Parent=gene787;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002401870.1,GeneID:7144454;gbkey=CDS;product=replication protein P of bacteriophage;protein_id=YP_002401870.1;transl_table=11
NC_011748.1	RefSeq	gene	830698	831000	.	+	.	ID=gene788;Name=EC55989_0771;Dbxref=GeneID:7144455;gbkey=Gene;locus_tag=EC55989_0771
NC_011748.1	RefSeq	CDS	830698	831000	.	+	0	ID=cds727;Name=YP_002401871.1;Parent=gene788;Note=Evidence 2b : Function of strongly homologous gene%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002401871.1,GeneID:7144455;gbkey=CDS;product=Ren protein from phage origin;protein_id=YP_002401871.1;transl_table=11
NC_011748.1	RefSeq	gene	831068	831400	.	+	.	ID=gene789;Name=emrE;Dbxref=GeneID:7144456;gbkey=Gene;gene=emrE;locus_tag=EC55989_0772
NC_011748.1	RefSeq	CDS	831068	831400	.	+	0	ID=cds728;Name=YP_002401872.1;Parent=gene789;Note=member of the small MDR %28multidrug resistance%29 family of transporters%3B in Escherichia coli this protein provides resistance against a number of positively charged compounds including ethidium bromide and erythromycin%3B proton-dependent secondary transporter which exchanges protons for compound translocation;Dbxref=Genbank:YP_002401872.1,GeneID:7144456;gbkey=CDS;product=multidrug efflux protein;protein_id=YP_002401872.1;transl_table=11
NC_011748.1	RefSeq	gene	831656	833182	.	+	.	ID=gene790;Name=ybcK;Dbxref=GeneID:7145992;gbkey=Gene;gene=ybcK;locus_tag=EC55989_0773
NC_011748.1	RefSeq	CDS	831656	833182	.	+	0	ID=cds729;Name=YP_002401873.1;Parent=gene790;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002401873.1,GeneID:7145992;gbkey=CDS;product=site-specific invertase%3B DLP12 prophage;protein_id=YP_002401873.1;transl_table=11
NC_011748.1	RefSeq	gene	833179	833355	.	+	.	ID=gene791;Name=EC55989_0774;Dbxref=GeneID:7148129;gbkey=Gene;locus_tag=EC55989_0774
NC_011748.1	RefSeq	CDS	833179	833355	.	+	0	ID=cds730;Name=YP_002401874.1;Parent=gene791;Note=Evidence 5 : No homology to any previously reported sequences%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002401874.1,GeneID:7148129;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401874.1;transl_table=11
NC_011748.1	RefSeq	gene	833294	833533	.	+	.	ID=gene792;Name=EC55989_0775;Dbxref=GeneID:7144457;gbkey=Gene;locus_tag=EC55989_0775;pseudo=true
NC_011748.1	RefSeq	region	833294	833533	.	+	.	ID=id71;Note=fragment of conserved hypothetical protein from bacteriophage origin %28partial%29%3BEvidence 7 : Gene remnant%3B Product type h : extrachromosomal origin;Dbxref=GeneID:7144457;gbkey=misc_feature
NC_011748.1	RefSeq	gene	833852	834361	.	+	.	ID=gene793;Name=EC55989_0776;Dbxref=GeneID:7144458;gbkey=Gene;locus_tag=EC55989_0776
NC_011748.1	RefSeq	CDS	833852	834361	.	+	0	ID=cds731;Name=YP_002401875.1;Parent=gene793;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002401875.1,GeneID:7144458;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401875.1;transl_table=11
NC_011748.1	RefSeq	gene	834556	835011	.	+	.	ID=gene794;Name=ybcN;Dbxref=GeneID:7144459;gbkey=Gene;gene=ybcN;locus_tag=EC55989_0777
NC_011748.1	RefSeq	CDS	834556	835011	.	+	0	ID=cds732;Name=YP_002401876.1;Parent=gene794;Note=DLP12 prophage;Dbxref=Genbank:YP_002401876.1,GeneID:7144459;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401876.1;transl_table=11
NC_011748.1	RefSeq	gene	835011	835181	.	+	.	ID=gene795;Name=ninE;Dbxref=GeneID:7148132;gbkey=Gene;gene=ninE;locus_tag=EC55989_0778
NC_011748.1	RefSeq	CDS	835011	835181	.	+	0	ID=cds733;Name=YP_002401877.1;Parent=gene795;Note=DLP12 prophage%3B conserved protein similar to phage 82 and lambda proteins;Dbxref=Genbank:YP_002401877.1,GeneID:7148132;gbkey=CDS;product=prophage protein NinE;protein_id=YP_002401877.1;transl_table=11
NC_011748.1	RefSeq	gene	835174	835464	.	+	.	ID=gene796;Name=ybcO;Dbxref=GeneID:7147001;gbkey=Gene;gene=ybcO;locus_tag=EC55989_0779
NC_011748.1	RefSeq	CDS	835174	835464	.	+	0	ID=cds734;Name=YP_002401878.1;Parent=gene796;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002401878.1,GeneID:7147001;gbkey=CDS;product=DLP12 prophage;protein_id=YP_002401878.1;transl_table=11
NC_011748.1	RefSeq	gene	835595	835822	.	+	.	ID=gene797;Name=rusA;Dbxref=GeneID:7148133;gbkey=Gene;gene=rusA;locus_tag=EC55989_0780;pseudo=true
NC_011748.1	RefSeq	region	835595	835822	.	+	.	ID=id72;Note=fragment of endonuclease RUS%3B DLP12 prophage %28partial%29%3BEvidence 7 : Gene remnant%3B Product type h : extrachromosomal origin;Dbxref=GeneID:7148133;gbkey=misc_feature
NC_011748.1	RefSeq	gene	836045	836428	.	+	.	ID=gene798;Name=ybcQ;Dbxref=GeneID:7147559;gbkey=Gene;gene=ybcQ;locus_tag=EC55989_0781
NC_011748.1	RefSeq	CDS	836045	836428	.	+	0	ID=cds735;Name=YP_002401879.1;Parent=gene798;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 8648624%2C 9278503%3B Product type pf :  factor;Dbxref=Genbank:YP_002401879.1,GeneID:7147559;gbkey=CDS;product=antitermination protein Q;protein_id=YP_002401879.1;transl_table=11
NC_011748.1	RefSeq	gene	836617	837699	.	-	.	ID=gene799;Name=nmpC;Dbxref=GeneID:7148134;gbkey=Gene;gene=nmpC;locus_tag=EC55989_0782
NC_011748.1	RefSeq	CDS	836617	837699	.	-	0	ID=cds736;Name=YP_002401880.1;Parent=gene799;Note=Evidence 2b : Function of strongly homologous gene%3B PubMedId : 3017988%2C 8057841%3B Product type m : membrane component;Dbxref=Genbank:YP_002401880.1,GeneID:7148134;gbkey=CDS;product=outer membrane porin%3B DLP12 prophage;protein_id=YP_002401880.1;transl_table=11
NC_011748.1	RefSeq	gene	838288	838503	.	+	.	ID=gene800;Name=essD;Dbxref=GeneID:7147012;gbkey=Gene;gene=essD;locus_tag=EC55989_0783
NC_011748.1	RefSeq	CDS	838288	838503	.	+	0	ID=cds737;Name=YP_002401881.1;Parent=gene800;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 2019562%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002401881.1,GeneID:7147012;gbkey=CDS;product=phage lysis protein S%3B DLP12 prophage;protein_id=YP_002401881.1;transl_table=11
NC_011748.1	RefSeq	gene	838503	839000	.	+	.	ID=gene801;Name=ybcS;Dbxref=GeneID:7146023;gbkey=Gene;gene=ybcS;locus_tag=EC55989_0784
NC_011748.1	RefSeq	CDS	838503	839000	.	+	0	ID=cds738;Name=YP_002401882.1;Parent=gene801;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 3017988%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002401882.1,GeneID:7146023;gbkey=CDS;product=lysozyme%3B DLP12 prophage;protein_id=YP_002401882.1;transl_table=11
NC_011748.1	RefSeq	gene	838985	839434	.	+	.	ID=gene802;Name=EC55989_0785;Dbxref=GeneID:7148135;gbkey=Gene;locus_tag=EC55989_0785
NC_011748.1	RefSeq	CDS	838985	839434	.	+	0	ID=cds739;Name=YP_002401883.1;Parent=gene802;Note=Evidence 2b : Function of strongly homologous gene%3B Product type e : enzyme;Dbxref=Genbank:YP_002401883.1,GeneID:7148135;gbkey=CDS;product=bacteriophage lysis protein;protein_id=YP_002401883.1;transl_table=11
NC_011748.1	RefSeq	gene	839640	840161	.	+	.	ID=gene803;Name=EC55989_0786;Dbxref=GeneID:7144460;gbkey=Gene;locus_tag=EC55989_0786
NC_011748.1	RefSeq	CDS	839640	840161	.	+	0	ID=cds740;Name=YP_002401884.1;Parent=gene803;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002401884.1,GeneID:7144460;gbkey=CDS;product=phage protein;protein_id=YP_002401884.1;transl_table=11
NC_011748.1	RefSeq	gene	840511	840936	.	-	.	ID=gene804;Name=EC55989_0787;Dbxref=GeneID:7144461;gbkey=Gene;locus_tag=EC55989_0787
NC_011748.1	RefSeq	CDS	840511	840936	.	-	0	ID=cds741;Name=YP_002401885.1;Parent=gene804;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002401885.1,GeneID:7144461;gbkey=CDS;product=phage protein;protein_id=YP_002401885.1;transl_table=11
NC_011748.1	RefSeq	gene	840978	841211	.	-	.	ID=gene805;Name=ynfO;Dbxref=GeneID:7144462;gbkey=Gene;gene=ynfO;locus_tag=EC55989_0788
NC_011748.1	RefSeq	CDS	840978	841211	.	-	0	ID=cds742;Name=YP_002401886.1;Parent=gene805;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002401886.1,GeneID:7144462;gbkey=CDS;product=Qin prophage;protein_id=YP_002401886.1;transl_table=11
NC_011748.1	RefSeq	gene	841600	842145	.	+	.	ID=gene806;Name=nohB;Dbxref=GeneID:7149321;gbkey=Gene;gene=nohB;locus_tag=EC55989_0789
NC_011748.1	RefSeq	CDS	841600	842145	.	+	0	ID=cds743;Name=YP_002401887.1;Parent=gene806;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 92334985%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002401887.1,GeneID:7149321;gbkey=CDS;product=DNA packaging protein%3B DLP12 prophage;protein_id=YP_002401887.1;transl_table=11
NC_011748.1	RefSeq	gene	842120	843781	.	+	.	ID=gene807;Name=A;Dbxref=GeneID:7147013;gbkey=Gene;gene=A;locus_tag=EC55989_0790
NC_011748.1	RefSeq	CDS	842120	843781	.	+	0	ID=cds744;Name=YP_002401888.1;Parent=gene807;Note=Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002401888.1,GeneID:7147013;gbkey=CDS;product=Terminase large subunit from bacteriophage origin;protein_id=YP_002401888.1;transl_table=11
NC_011748.1	RefSeq	gene	843826	844044	.	+	.	ID=gene808;Name=EC55989_0791;Dbxref=GeneID:7145411;gbkey=Gene;locus_tag=EC55989_0791;pseudo=true
NC_011748.1	RefSeq	region	843826	844044	.	+	.	ID=id73;Note=fragment of terminase large subunit %28DNA packaging protein A%29 from bacteriophage origin %28partial%29%3BEvidence 7 : Gene remnant%3B Product type h : extrachromosomal origin;Dbxref=GeneID:7145411;gbkey=misc_feature
NC_011748.1	RefSeq	gene	844041	844247	.	+	.	ID=gene809;Name=W;Dbxref=GeneID:7144463;gbkey=Gene;gene=W;locus_tag=EC55989_0792
NC_011748.1	RefSeq	CDS	844041	844247	.	+	0	ID=cds745;Name=YP_002401889.1;Parent=gene809;Note=Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism%3B PubMedId : 11302702%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002401889.1,GeneID:7144463;gbkey=CDS;product=Head-to-tail joining protein W %28gpW%29 from bacteriophage origin;protein_id=YP_002401889.1;transl_table=11
NC_011748.1	RefSeq	gene	844244	845845	.	+	.	ID=gene810;Name=B;Dbxref=GeneID:7147954;gbkey=Gene;gene=B;locus_tag=EC55989_0793
NC_011748.1	RefSeq	CDS	844244	845845	.	+	0	ID=cds746;Name=YP_002401890.1;Parent=gene810;Note=Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002401890.1,GeneID:7147954;gbkey=CDS;product=Portal protein%3B minor capsid protein %5BContains: Protein B%2A%5D from bacteriophage origin;protein_id=YP_002401890.1;transl_table=11
NC_011748.1	RefSeq	gene	845691	847145	.	+	.	ID=gene811;Name=C;Dbxref=GeneID:7145591;gbkey=Gene;gene=C;locus_tag=EC55989_0794
NC_011748.1	RefSeq	CDS	845691	847145	.	+	0	ID=cds747;Name=YP_002401891.1;Parent=gene811;Note=Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism%3B PubMedId : 6221115%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002401891.1,GeneID:7145591;gbkey=CDS;product=Minor capsid protein C from bacteriophage origin;protein_id=YP_002401891.1;transl_table=11
NC_011748.1	RefSeq	gene	847149	847487	.	+	.	ID=gene812;Name=D;Dbxref=GeneID:7145645;gbkey=Gene;gene=D;locus_tag=EC55989_0795
NC_011748.1	RefSeq	CDS	847149	847487	.	+	0	ID=cds748;Name=YP_002401892.1;Parent=gene812;Note=Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002401892.1,GeneID:7145645;gbkey=CDS;product=Head decoration protein from bacteriophage origin;protein_id=YP_002401892.1;transl_table=11
NC_011748.1	RefSeq	gene	847516	848568	.	+	.	ID=gene813;Name=E;Dbxref=GeneID:7145839;gbkey=Gene;gene=E;locus_tag=EC55989_0796
NC_011748.1	RefSeq	CDS	847516	848568	.	+	0	ID=cds749;Name=YP_002401893.1;Parent=gene813;Note=Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002401893.1,GeneID:7145839;gbkey=CDS;product=Major head coat protein from bacteriophage origin;protein_id=YP_002401893.1;transl_table=11
NC_011748.1	RefSeq	gene	848571	849005	.	+	.	ID=gene814;Name=fI;Dbxref=GeneID:7145965;gbkey=Gene;gene=fI;locus_tag=EC55989_0797
NC_011748.1	RefSeq	CDS	848571	849005	.	+	0	ID=cds750;Name=YP_002401894.1;Parent=gene814;Note=Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002401894.1,GeneID:7145965;gbkey=CDS;product=DNA packaging protein from bacteriophage origin;protein_id=YP_002401894.1;transl_table=11
NC_011748.1	RefSeq	gene	849017	849370	.	+	.	ID=gene815;Name=fII;Dbxref=GeneID:7146105;gbkey=Gene;gene=fII;locus_tag=EC55989_0798
NC_011748.1	RefSeq	CDS	849017	849370	.	+	0	ID=cds751;Name=YP_002401895.1;Parent=gene815;Note=Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism%3B PubMedId : 6221115%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002401895.1,GeneID:7146105;gbkey=CDS;product=Tail attachment protein %28Minor capsid protein FII%29 from bacteriophage origin;protein_id=YP_002401895.1;transl_table=11
NC_011748.1	RefSeq	gene	849382	849960	.	+	.	ID=gene816;Name=EC55989_0799;Dbxref=GeneID:7146109;gbkey=Gene;locus_tag=EC55989_0799
NC_011748.1	RefSeq	CDS	849382	849960	.	+	0	ID=cds752;Name=YP_002401896.1;Parent=gene816;Note=Evidence 2b : Function of strongly homologous gene%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002401896.1,GeneID:7146109;gbkey=CDS;product=Minor tail protein Z %28GpZ%29;protein_id=YP_002401896.1;transl_table=11
NC_011748.1	RefSeq	gene	849957	850352	.	+	.	ID=gene817;Name=EC55989_0800;Dbxref=GeneID:7144464;gbkey=Gene;locus_tag=EC55989_0800
NC_011748.1	RefSeq	CDS	849957	850352	.	+	0	ID=cds753;Name=YP_002401897.1;Parent=gene817;Note=Evidence 2b : Function of strongly homologous gene%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002401897.1,GeneID:7144464;gbkey=CDS;product=Minor tail protein U;protein_id=YP_002401897.1;transl_table=11
NC_011748.1	RefSeq	gene	850330	851100	.	+	.	ID=gene818;Name=EC55989_0801;Dbxref=GeneID:7144465;gbkey=Gene;locus_tag=EC55989_0801
NC_011748.1	RefSeq	CDS	850330	851100	.	+	0	ID=cds754;Name=YP_002401898.1;Parent=gene818;Note=Evidence 2b : Function of strongly homologous gene%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002401898.1,GeneID:7144465;gbkey=CDS;product=Major tail protein V;protein_id=YP_002401898.1;transl_table=11
NC_011748.1	RefSeq	gene	851116	851538	.	+	.	ID=gene819;Name=EC55989_0802;Dbxref=GeneID:7144466;gbkey=Gene;locus_tag=EC55989_0802
NC_011748.1	RefSeq	CDS	851116	851538	.	+	0	ID=cds755;Name=YP_002401899.1;Parent=gene819;Note=Evidence 2b : Function of strongly homologous gene%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002401899.1,GeneID:7144466;gbkey=CDS;product=Minor tail protein G;protein_id=YP_002401899.1;transl_table=11
NC_011748.1	RefSeq	gene	851520	851954	.	+	.	ID=gene820;Name=EC55989_0803;Dbxref=GeneID:7144467;gbkey=Gene;locus_tag=EC55989_0803
NC_011748.1	RefSeq	CDS	851520	851954	.	+	0	ID=cds756;Name=YP_002401900.1;Parent=gene820;Note=Evidence 2b : Function of strongly homologous gene%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002401900.1,GeneID:7144467;gbkey=CDS;product=Minor tail protein T;protein_id=YP_002401900.1;transl_table=11
NC_011748.1	RefSeq	gene	851947	854508	.	+	.	ID=gene821;Name=EC55989_0804;Dbxref=GeneID:7144468;gbkey=Gene;locus_tag=EC55989_0804
NC_011748.1	RefSeq	CDS	851947	854508	.	+	0	ID=cds757;Name=YP_002401901.1;Parent=gene821;Note=Evidence 2b : Function of strongly homologous gene%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002401901.1,GeneID:7144468;gbkey=CDS;product=Minor tail protein precursor H;protein_id=YP_002401901.1;transl_table=11
NC_011748.1	RefSeq	gene	854505	854834	.	+	.	ID=gene822;Name=EC55989_0805;Dbxref=GeneID:7144469;gbkey=Gene;locus_tag=EC55989_0805
NC_011748.1	RefSeq	CDS	854505	854834	.	+	0	ID=cds758;Name=YP_002401902.1;Parent=gene822;Note=Evidence 2b : Function of strongly homologous gene%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002401902.1,GeneID:7144469;gbkey=CDS;product=Minor tail protein M;protein_id=YP_002401902.1;transl_table=11
NC_011748.1	RefSeq	gene	854834	855532	.	+	.	ID=gene823;Name=EC55989_0806;Dbxref=GeneID:7144470;gbkey=Gene;locus_tag=EC55989_0806
NC_011748.1	RefSeq	CDS	854834	855532	.	+	0	ID=cds759;Name=YP_002401903.1;Parent=gene823;Note=Evidence 2b : Function of strongly homologous gene%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002401903.1,GeneID:7144470;gbkey=CDS;product=Minor tail protein L;protein_id=YP_002401903.1;transl_table=11
NC_011748.1	RefSeq	gene	855538	856281	.	+	.	ID=gene824;Name=EC55989_0807;Dbxref=GeneID:7144471;gbkey=Gene;locus_tag=EC55989_0807
NC_011748.1	RefSeq	CDS	855538	856281	.	+	0	ID=cds760;Name=YP_002401904.1;Parent=gene824;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002401904.1,GeneID:7144471;gbkey=CDS;product=tail fiber component K of prophage;protein_id=YP_002401904.1;transl_table=11
NC_011748.1	RefSeq	gene	856179	856850	.	+	.	ID=gene825;Name=EC55989_0808;Dbxref=GeneID:7144472;gbkey=Gene;locus_tag=EC55989_0808
NC_011748.1	RefSeq	CDS	856179	856850	.	+	0	ID=cds761;Name=YP_002401905.1;Parent=gene825;Note=Evidence 2b : Function of strongly homologous gene%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002401905.1,GeneID:7144472;gbkey=CDS;product=Tail assembly protein I;protein_id=YP_002401905.1;transl_table=11
NC_011748.1	RefSeq	gene	856911	860408	.	+	.	ID=gene826;Name=EC55989_0809;Dbxref=GeneID:7144473;gbkey=Gene;locus_tag=EC55989_0809
NC_011748.1	RefSeq	CDS	856911	860408	.	+	0	ID=cds762;Name=YP_002401906.1;Parent=gene826;Note=Evidence 2b : Function of strongly homologous gene%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002401906.1,GeneID:7144473;gbkey=CDS;product=Host specificity protein J of prophage;protein_id=YP_002401906.1;transl_table=11
NC_011748.1	RefSeq	gene	860479	861078	.	+	.	ID=gene827;Name=EC55989_0810;Dbxref=GeneID:7144474;gbkey=Gene;locus_tag=EC55989_0810
NC_011748.1	RefSeq	CDS	860479	861078	.	+	0	ID=cds763;Name=YP_002401907.1;Parent=gene827;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002401907.1,GeneID:7144474;gbkey=CDS;product=Lom-like outer membrane protein of phage origin;protein_id=YP_002401907.1;transl_table=11
NC_011748.1	RefSeq	gene	861137	864217	.	+	.	ID=gene828;Name=EC55989_0811;Dbxref=GeneID:7144475;gbkey=Gene;locus_tag=EC55989_0811
NC_011748.1	RefSeq	CDS	861137	864217	.	+	0	ID=cds764;Name=YP_002401908.1;Parent=gene828;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002401908.1,GeneID:7144475;gbkey=CDS;product=tail fiber protein;protein_id=YP_002401908.1;transl_table=11
NC_011748.1	RefSeq	gene	864217	864801	.	+	.	ID=gene829;Name=tfaQ;Dbxref=GeneID:7144476;gbkey=Gene;gene=tfaQ;locus_tag=EC55989_0812
NC_011748.1	RefSeq	CDS	864217	864801	.	+	0	ID=cds765;Name=YP_002401909.1;Parent=gene829;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pf :  factor;Dbxref=Genbank:YP_002401909.1,GeneID:7144476;gbkey=CDS;product=tail fiber chaperone%3B Qin prophage;protein_id=YP_002401909.1;transl_table=11
NC_011748.1	RefSeq	gene	864875	866206	.	-	.	ID=gene830;Name=EC55989_0813;Dbxref=GeneID:7147777;gbkey=Gene;locus_tag=EC55989_0813
NC_011748.1	RefSeq	CDS	864875	866206	.	-	0	ID=cds766;Name=YP_002401910.1;Parent=gene830;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002401910.1,GeneID:7147777;gbkey=CDS;product=membrane protein;protein_id=YP_002401910.1;transl_table=11
NC_011748.1	RefSeq	gene	866103	866297	.	+	.	ID=gene831;Name=EC55989_0814;Dbxref=GeneID:7144477;gbkey=Gene;locus_tag=EC55989_0814
NC_011748.1	RefSeq	CDS	866103	866297	.	+	0	ID=cds767;Name=YP_002401911.1;Parent=gene831;Dbxref=Genbank:YP_002401911.1,GeneID:7144477;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401911.1;transl_table=11
NC_011748.1	RefSeq	gene	866562	866735	.	+	.	ID=gene832;Name=EC55989_0815;Dbxref=GeneID:7144478;gbkey=Gene;locus_tag=EC55989_0815
NC_011748.1	RefSeq	CDS	866562	866735	.	+	0	ID=cds768;Name=YP_002401912.1;Parent=gene832;Note=Evidence 6 : Doubtful CDS;Dbxref=Genbank:YP_002401912.1,GeneID:7144478;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401912.1;transl_table=11
NC_011748.1	RefSeq	gene	866952	867428	.	-	.	ID=gene833;Name=ybhB;Dbxref=GeneID:7144479;gbkey=Gene;gene=ybhB;locus_tag=EC55989_0816
NC_011748.1	RefSeq	CDS	866952	867428	.	-	0	ID=cds769;Name=YP_002401913.1;Parent=gene833;Note=YbhB%3B similar to rat and human kinase inhibitory proteins;Dbxref=Genbank:YP_002401913.1,GeneID:7144479;gbkey=CDS;product=kinase inhibitor protein;protein_id=YP_002401913.1;transl_table=11
NC_011748.1	RefSeq	gene	867487	868776	.	-	.	ID=gene834;Name=bioA;Dbxref=GeneID:7148185;gbkey=Gene;gene=bioA;locus_tag=EC55989_0817
NC_011748.1	RefSeq	CDS	867487	868776	.	-	0	ID=cds770;Name=YP_002401914.1;Parent=gene834;Note=catalyzes the formation of S-adenosyl-4-methylthionine-2-oxobutanoate and 7%2C8-diaminononanoate from S-adenosyl-L-methionine and 8-amino-7-oxononanoate;Dbxref=Genbank:YP_002401914.1,GeneID:7148185;gbkey=CDS;product=adenosylmethionine-8-amino-7-oxononanoate aminotransferase;protein_id=YP_002401914.1;transl_table=11
NC_011748.1	RefSeq	gene	868863	869903	.	+	.	ID=gene835;Name=bioB;Dbxref=GeneID:7145624;gbkey=Gene;gene=bioB;locus_tag=EC55989_0818
NC_011748.1	RefSeq	CDS	868863	869903	.	+	0	ID=cds771;Name=YP_002401915.1;Parent=gene835;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 11834738%2C 12475249%2C 14704425%2C 14967041%2C 20250955%2C 89066784%2C 94170810%2C 94190882%2C 97382445%2C 11686925%3B Product type e : enzyme;Dbxref=Genbank:YP_002401915.1,GeneID:7145624;gbkey=CDS;product=biotin synthase;protein_id=YP_002401915.1;transl_table=11
NC_011748.1	RefSeq	gene	869900	871054	.	+	.	ID=gene836;Name=bioF;Dbxref=GeneID:7145625;gbkey=Gene;gene=bioF;locus_tag=EC55989_0819
NC_011748.1	RefSeq	CDS	869900	871054	.	+	0	ID=cds772;Name=YP_002401916.1;Parent=gene836;Note=catalyzes the formation of 8-amino-7-oxononanoate from 6-carboxyhexanoyl-CoA and L-alanine;Dbxref=Genbank:YP_002401916.1,GeneID:7145625;gbkey=CDS;product=8-amino-7-oxononanoate synthase;protein_id=YP_002401916.1;transl_table=11
NC_011748.1	RefSeq	gene	871041	871796	.	+	.	ID=gene837;Name=bioC;Dbxref=GeneID:7145628;gbkey=Gene;gene=bioC;locus_tag=EC55989_0820
NC_011748.1	RefSeq	CDS	871041	871796	.	+	0	ID=cds773;Name=YP_002401917.1;Parent=gene837;Note=methyltransferase%3B acyl carrier protein involved in an unidentified step in the synthesis of pimeloyl-CoA%2C a biotin precursor%3B member of the bio operon %28bioABFCD%29%3B in Escherichia coli%2C bioC-null mutants require biotin for growth;Dbxref=Genbank:YP_002401917.1,GeneID:7145628;gbkey=CDS;product=biotin biosynthesis protein BioC;protein_id=YP_002401917.1;transl_table=11
NC_011748.1	RefSeq	gene	871789	872466	.	+	.	ID=gene838;Name=bioD;Dbxref=GeneID:7145626;gbkey=Gene;gene=bioD;locus_tag=EC55989_0821
NC_011748.1	RefSeq	CDS	871789	872466	.	+	0	ID=cds774;Name=YP_002401918.1;Parent=gene838;Note=DTB synthetase%3B dethiobiotin synthase%3B involved in production of dethiobiotin from ATP and 7%2C8-diaminononanoate and carbon dioxide%3B contains magnesium;Dbxref=Genbank:YP_002401918.1,GeneID:7145626;gbkey=CDS;product=dithiobiotin synthetase;protein_id=YP_002401918.1;transl_table=11
NC_011748.1	RefSeq	gene	873045	875066	.	+	.	ID=gene839;Name=uvrB;Dbxref=GeneID:7145627;gbkey=Gene;gene=uvrB;locus_tag=EC55989_0822
NC_011748.1	RefSeq	CDS	873045	875066	.	+	0	ID=cds775;Name=YP_002401919.1;Parent=gene839;Note=The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands%2C where it probes for the presence of a lesion;Dbxref=Genbank:YP_002401919.1,GeneID:7145627;gbkey=CDS;product=excinuclease ABC subunit B;protein_id=YP_002401919.1;transl_table=11
NC_011748.1	RefSeq	gene	875258	876166	.	-	.	ID=gene840;Name=ybhK;Dbxref=GeneID:7147934;gbkey=Gene;gene=ybhK;locus_tag=EC55989_0823
NC_011748.1	RefSeq	CDS	875258	876166	.	-	0	ID=cds776;Name=YP_002401920.1;Parent=gene840;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 16272399%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002401920.1,GeneID:7147934;gbkey=CDS;product=transferase with NAD%28P%29-binding Rossmann-fold domain%3B UPF0052 family;protein_id=YP_002401920.1;transl_table=11
NC_011748.1	RefSeq	gene	876563	877552	.	+	.	ID=gene841;Name=moaA;Dbxref=GeneID:7148193;gbkey=Gene;gene=moaA;locus_tag=EC55989_0824
NC_011748.1	RefSeq	CDS	876563	877552	.	+	0	ID=cds777;Name=YP_002401921.1;Parent=gene841;Note=together with moaC%2C is involved in the conversion of a guanosine derivative %28GXP%29 into molybdopterin precursor Z;Dbxref=Genbank:YP_002401921.1,GeneID:7148193;gbkey=CDS;product=molybdenum cofactor biosynthesis protein A;protein_id=YP_002401921.1;transl_table=11
NC_011748.1	RefSeq	gene	877574	878086	.	+	.	ID=gene842;Name=moaB;Dbxref=GeneID:7146872;gbkey=Gene;gene=moaB;locus_tag=EC55989_0825
NC_011748.1	RefSeq	CDS	877574	878086	.	+	0	ID=cds778;Name=YP_002401922.1;Parent=gene842;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 93368423%3B Product type pf :  factor;Dbxref=Genbank:YP_002401922.1,GeneID:7146872;gbkey=CDS;product=molybdopterin biosynthesis protein B;protein_id=YP_002401922.1;transl_table=11
NC_011748.1	RefSeq	gene	878089	878574	.	+	.	ID=gene843;Name=moaC;Dbxref=GeneID:7146873;gbkey=Gene;gene=moaC;locus_tag=EC55989_0826
NC_011748.1	RefSeq	CDS	878089	878574	.	+	0	ID=cds779;Name=YP_002401923.1;Parent=gene843;Note=MoaC%3B along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z%3B involved in molybdenum cofactor biosynthesis;Dbxref=Genbank:YP_002401923.1,GeneID:7146873;gbkey=CDS;product=molybdenum cofactor biosynthesis protein MoaC;protein_id=YP_002401923.1;transl_table=11
NC_011748.1	RefSeq	gene	878567	878812	.	+	.	ID=gene844;Name=moaD;Dbxref=GeneID:7146874;gbkey=Gene;gene=moaD;locus_tag=EC55989_0827
NC_011748.1	RefSeq	CDS	878567	878812	.	+	0	ID=cds780;Name=YP_002401924.1;Parent=gene844;Note=catalyzes the conversion of molybdopterin precursor Z into molybdopterin;Dbxref=Genbank:YP_002401924.1,GeneID:7146874;gbkey=CDS;product=molybdopterin synthase small subunit;protein_id=YP_002401924.1;transl_table=11
NC_011748.1	RefSeq	gene	878814	879266	.	+	.	ID=gene845;Name=moaE;Dbxref=GeneID:7146875;gbkey=Gene;gene=moaE;locus_tag=EC55989_0828
NC_011748.1	RefSeq	CDS	878814	879266	.	+	0	ID=cds781;Name=YP_002401925.1;Parent=gene845;Note=catalyzes the conversion of molybdopterin precursor Z into molybdopterin;Dbxref=Genbank:YP_002401925.1,GeneID:7146875;gbkey=CDS;product=molybdopterin guanine dinucleotide biosynthesis protein MoaE;protein_id=YP_002401925.1;transl_table=11
NC_011748.1	RefSeq	gene	879403	880107	.	+	.	ID=gene846;Name=ybhL;Dbxref=GeneID:7146876;gbkey=Gene;gene=ybhL;locus_tag=EC55989_0829
NC_011748.1	RefSeq	CDS	879403	880107	.	+	0	ID=cds782;Name=YP_002401926.1;Parent=gene846;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002401926.1,GeneID:7146876;gbkey=CDS;product=inner membrane protein;protein_id=YP_002401926.1;transl_table=11
NC_011748.1	RefSeq	gene	880252	880956	.	+	.	ID=gene847;Name=EC55989_0830;Dbxref=GeneID:7148194;gbkey=Gene;locus_tag=EC55989_0830
NC_011748.1	RefSeq	CDS	880252	880956	.	+	0	ID=cds783;Name=YP_002401927.1;Parent=gene847;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002401927.1,GeneID:7148194;gbkey=CDS;product=integral membrane protein;protein_id=YP_002401927.1;transl_table=11
NC_011748.1	RefSeq	gene	881026	881739	.	+	.	ID=gene848;Name=ybhM;Dbxref=GeneID:7144480;gbkey=Gene;gene=ybhM;locus_tag=EC55989_0831
NC_011748.1	RefSeq	CDS	881026	881739	.	+	0	ID=cds784;Name=YP_002401928.1;Parent=gene848;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002401928.1,GeneID:7144480;gbkey=CDS;product=inner membrane protein;protein_id=YP_002401928.1;transl_table=11
NC_011748.1	RefSeq	gene	881775	882731	.	-	.	ID=gene849;Name=ybhN;Dbxref=GeneID:7148195;gbkey=Gene;gene=ybhN;locus_tag=EC55989_0832
NC_011748.1	RefSeq	CDS	881775	882731	.	-	0	ID=cds785;Name=YP_002401929.1;Parent=gene849;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002401929.1,GeneID:7148195;gbkey=CDS;product=inner membrane protein;protein_id=YP_002401929.1;transl_table=11
NC_011748.1	RefSeq	gene	882731	883972	.	-	.	ID=gene850;Name=ybhO;Dbxref=GeneID:7148196;gbkey=Gene;gene=ybhO;locus_tag=EC55989_0833
NC_011748.1	RefSeq	CDS	882731	883972	.	-	0	ID=cds786;Name=YP_002401930.1;Parent=gene850;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 20102623%2C 10634942%3B Product type e : enzyme;Dbxref=Genbank:YP_002401930.1,GeneID:7148196;gbkey=CDS;product=cardiolipin synthase 2;protein_id=YP_002401930.1;transl_table=11
NC_011748.1	RefSeq	gene	883969	884730	.	-	.	ID=gene851;Name=ybhP;Dbxref=GeneID:7148197;gbkey=Gene;gene=ybhP;locus_tag=EC55989_0834
NC_011748.1	RefSeq	CDS	883969	884730	.	-	0	ID=cds787;Name=YP_002401931.1;Parent=gene851;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002401931.1,GeneID:7148197;gbkey=CDS;product=metal-dependent hydrolase;protein_id=YP_002401931.1;transl_table=11
NC_011748.1	RefSeq	gene	884863	885273	.	+	.	ID=gene852;Name=ybhQ;Dbxref=GeneID:7148198;gbkey=Gene;gene=ybhQ;locus_tag=EC55989_0835
NC_011748.1	RefSeq	CDS	884863	885273	.	+	0	ID=cds788;Name=YP_002401932.1;Parent=gene852;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002401932.1,GeneID:7148198;gbkey=CDS;product=inner membrane protein;protein_id=YP_002401932.1;transl_table=11
NC_011748.1	RefSeq	gene	885235	886341	.	-	.	ID=gene853;Name=ybhR;Dbxref=GeneID:7148199;gbkey=Gene;gene=ybhR;locus_tag=EC55989_0836
NC_011748.1	RefSeq	CDS	885235	886341	.	-	0	ID=cds789;Name=YP_002401933.1;Parent=gene853;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002401933.1,GeneID:7148199;gbkey=CDS;product=transporter subunit: permease component of ABC superfamily;protein_id=YP_002401933.1;transl_table=11
NC_011748.1	RefSeq	gene	886352	887485	.	-	.	ID=gene854;Name=ybhS;Dbxref=GeneID:7148200;gbkey=Gene;gene=ybhS;locus_tag=EC55989_0837
NC_011748.1	RefSeq	CDS	886352	887485	.	-	0	ID=cds790;Name=YP_002401934.1;Parent=gene854;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002401934.1,GeneID:7148200;gbkey=CDS;product=transporter subunit: permease component of ABC superfamily;protein_id=YP_002401934.1;transl_table=11
NC_011748.1	RefSeq	gene	887478	889214	.	-	.	ID=gene855;Name=ybhF;Dbxref=GeneID:7148201;gbkey=Gene;gene=ybhF;locus_tag=EC55989_0838
NC_011748.1	RefSeq	CDS	887478	889214	.	-	0	ID=cds791;Name=YP_002401935.1;Parent=gene855;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002401935.1,GeneID:7148201;gbkey=CDS;product=transporter fused subunits of ABC superfamily: ATP-binding components;protein_id=YP_002401935.1;transl_table=11
NC_011748.1	RefSeq	gene	889207	890205	.	-	.	ID=gene856;Name=ybhG;Dbxref=GeneID:7148188;gbkey=Gene;gene=ybhG;locus_tag=EC55989_0839
NC_011748.1	RefSeq	CDS	889207	890205	.	-	0	ID=cds792;Name=YP_002401936.1;Parent=gene856;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 16092522%3B Product type pt :  transporter;Dbxref=Genbank:YP_002401936.1,GeneID:7148188;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401936.1;transl_table=11
NC_011748.1	RefSeq	gene	890205	890876	.	-	.	ID=gene857;Name=ybiH;Dbxref=GeneID:7148189;gbkey=Gene;gene=ybiH;locus_tag=EC55989_0840
NC_011748.1	RefSeq	CDS	890205	890876	.	-	0	ID=cds793;Name=YP_002401937.1;Parent=gene857;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pr :  regulator;Dbxref=Genbank:YP_002401937.1,GeneID:7148189;gbkey=CDS;product=DNA-binding transcriptional regulator;protein_id=YP_002401937.1;transl_table=11
NC_011748.1	RefSeq	gene	891105	892469	.	+	.	ID=gene858;Name=rhlE;Dbxref=GeneID:7148206;gbkey=Gene;gene=rhlE;locus_tag=EC55989_0841
NC_011748.1	RefSeq	CDS	891105	892469	.	+	0	ID=cds794;Name=YP_002401938.1;Parent=gene858;Note=this helicase is not essential cell growth;Dbxref=Genbank:YP_002401938.1,GeneID:7148206;gbkey=CDS;product=ATP-dependent RNA helicase RhlE;protein_id=YP_002401938.1;transl_table=11
NC_011748.1	RefSeq	gene	892701	893183	.	-	.	ID=gene859;Name=ybiA;Dbxref=GeneID:7147397;gbkey=Gene;gene=ybiA;locus_tag=EC55989_0842
NC_011748.1	RefSeq	CDS	892701	893183	.	-	0	ID=cds795;Name=YP_002401939.1;Parent=gene859;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002401939.1,GeneID:7147397;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401939.1;transl_table=11
NC_011748.1	RefSeq	gene	893303	895453	.	+	.	ID=gene860;Name=dinG;Dbxref=GeneID:7148203;gbkey=Gene;gene=dinG;locus_tag=EC55989_0843
NC_011748.1	RefSeq	CDS	893303	895453	.	+	0	ID=cds796;Name=YP_002401940.1;Parent=gene860;Note=helicase involved in DNA repair and perhaps also replication;Dbxref=Genbank:YP_002401940.1,GeneID:7148203;gbkey=CDS;product=ATP-dependent DNA helicase DinG;protein_id=YP_002401940.1;transl_table=11
NC_011748.1	RefSeq	gene	895481	896443	.	+	.	ID=gene861;Name=ybiB;Dbxref=GeneID:7145917;gbkey=Gene;gene=ybiB;locus_tag=EC55989_0844
NC_011748.1	RefSeq	CDS	895481	896443	.	+	0	ID=cds797;Name=YP_002401941.1;Parent=gene861;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002401941.1,GeneID:7145917;gbkey=CDS;product=glycosyl transferase family protein;protein_id=YP_002401941.1;transl_table=11
NC_011748.1	RefSeq	gene	896584	897669	.	+	.	ID=gene862;Name=ybiC;Dbxref=GeneID:7148204;gbkey=Gene;gene=ybiC;locus_tag=EC55989_0845
NC_011748.1	RefSeq	CDS	896584	897669	.	+	0	ID=cds798;Name=YP_002401942.1;Parent=gene862;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 8405966%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002401942.1,GeneID:7148204;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401942.1;transl_table=11
NC_011748.1	RefSeq	gene	897898	898158	.	-	.	ID=gene863;Name=ybiJ;Dbxref=GeneID:7148205;gbkey=Gene;gene=ybiJ;locus_tag=EC55989_0846
NC_011748.1	RefSeq	CDS	897898	898158	.	-	0	ID=cds799;Name=YP_002401943.1;Parent=gene863;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002401943.1,GeneID:7148205;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401943.1;transl_table=11
NC_011748.1	RefSeq	gene	898423	898689	.	-	.	ID=gene864;Name=ybiI;Dbxref=GeneID:7148208;gbkey=Gene;gene=ybiI;locus_tag=EC55989_0847
NC_011748.1	RefSeq	CDS	898423	898689	.	-	0	ID=cds800;Name=YP_002401944.1;Parent=gene864;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002401944.1,GeneID:7148208;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401944.1;transl_table=11
NC_011748.1	RefSeq	gene	898763	899440	.	-	.	ID=gene865;Name=ybiX;Dbxref=GeneID:7148207;gbkey=Gene;gene=ybiX;locus_tag=EC55989_0848
NC_011748.1	RefSeq	CDS	898763	899440	.	-	0	ID=cds801;Name=YP_002401945.1;Parent=gene865;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002401945.1,GeneID:7148207;gbkey=CDS;product=hydroxylase;protein_id=YP_002401945.1;transl_table=11
NC_011748.1	RefSeq	gene	899482	901764	.	-	.	ID=gene866;Name=fiu;Dbxref=GeneID:7148219;gbkey=Gene;gene=fiu;locus_tag=EC55989_0849
NC_011748.1	RefSeq	CDS	899482	901764	.	-	0	ID=cds802;Name=YP_002401946.1;Parent=gene866;Note=Fiu%3B YbiL%3B porin involved in the uptake of iron complexed with catecholate siderophores %28e.g. dihydroxybenzoylserine%2C dihydroxybenzoate%29 and beta lactam agents%3B Fiu interacts with TonB which provides the energy required for transport across the outer membrane%3B acts as a receptor for iron-siderophores and microcins E492%2C M%2C and H47%3B outer membrane protein;Dbxref=Genbank:YP_002401946.1,GeneID:7148219;gbkey=CDS;product=catecholate siderophore receptor Fiu;protein_id=YP_002401946.1;transl_table=11
NC_011748.1	RefSeq	gene	902029	902433	.	-	.	ID=gene867;Name=ybiM;Dbxref=GeneID:7146114;gbkey=Gene;gene=ybiM;locus_tag=EC55989_0850
NC_011748.1	RefSeq	CDS	902029	902433	.	-	0	ID=cds803;Name=YP_002401947.1;Parent=gene867;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002401947.1,GeneID:7146114;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401947.1;transl_table=11
NC_011748.1	RefSeq	gene	902565	903491	.	+	.	ID=gene868;Name=ybiN;Dbxref=GeneID:7148209;gbkey=Gene;gene=ybiN;locus_tag=EC55989_0851
NC_011748.1	RefSeq	CDS	902565	903491	.	+	0	ID=cds804;Name=YP_002401948.1;Parent=gene868;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002401948.1,GeneID:7148209;gbkey=CDS;product=SAM-dependent methyltransferase;protein_id=YP_002401948.1;transl_table=11
NC_011748.1	RefSeq	gene	903488	905713	.	-	.	ID=gene869;Name=ybiO;Dbxref=GeneID:7148210;gbkey=Gene;gene=ybiO;locus_tag=EC55989_0852
NC_011748.1	RefSeq	CDS	903488	905713	.	-	0	ID=cds805;Name=YP_002401949.1;Parent=gene869;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002401949.1,GeneID:7148210;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401949.1;transl_table=11
NC_011748.1	RefSeq	gene	905830	906552	.	-	.	ID=gene870;Name=glnQ;Dbxref=GeneID:7148211;gbkey=Gene;gene=glnQ;locus_tag=EC55989_0853
NC_011748.1	RefSeq	CDS	905830	906552	.	-	0	ID=cds806;Name=YP_002401950.1;Parent=gene870;Note=similar to ATP-binding component of ABC transporters;Dbxref=Genbank:YP_002401950.1,GeneID:7148211;gbkey=CDS;product=glutamine ABC transporter ATP-binding protein;protein_id=YP_002401950.1;transl_table=11
NC_011748.1	RefSeq	gene	906549	907208	.	-	.	ID=gene871;Name=glnP;Dbxref=GeneID:7146311;gbkey=Gene;gene=glnP;locus_tag=EC55989_0854
NC_011748.1	RefSeq	CDS	906549	907208	.	-	0	ID=cds807;Name=YP_002401951.1;Parent=gene871;Note=similar to permease component of ABC transporters%3B mutations impair ability of Escherichia coli to transport and utilize glutamine;Dbxref=Genbank:YP_002401951.1,GeneID:7146311;gbkey=CDS;product=glutamine ABC transporter permease;protein_id=YP_002401951.1;transl_table=11
NC_011748.1	RefSeq	gene	907347	908093	.	-	.	ID=gene872;Name=glnH;Dbxref=GeneID:7146310;gbkey=Gene;gene=glnH;locus_tag=EC55989_0855
NC_011748.1	RefSeq	CDS	907347	908093	.	-	0	ID=cds808;Name=YP_002401952.1;Parent=gene872;Note=similar to periplasmic-binding component of ABC transporters;Dbxref=Genbank:YP_002401952.1,GeneID:7146310;gbkey=CDS;product=glutamine ABC transporter periplasmic protein;protein_id=YP_002401952.1;transl_table=11
NC_011748.1	RefSeq	STS	907449	907603	.	+	.	ID=id74;Dbxref=UniSTS:32806;gbkey=STS
NC_011748.1	RefSeq	gene	908497	909000	.	-	.	ID=gene873;Name=dps;Dbxref=GeneID:7146307;gbkey=Gene;gene=dps;locus_tag=EC55989_0856
NC_011748.1	RefSeq	CDS	908497	909000	.	-	0	ID=cds809;Name=YP_002401953.1;Parent=gene873;Note=binds DNA in a non-sequence-specific manner and is abundant during stationary phase%3B forms a DNA-protein crystal that protects DNA from damage%3B required for normal starvation response and long-term stationary viability%3B forms a homododecameric complex and sequesters iron which provides protection against oxidative damage;Dbxref=Genbank:YP_002401953.1,GeneID:7146307;gbkey=CDS;product=DNA starvation%2Fstationary phase protection protein Dps;protein_id=YP_002401953.1;transl_table=11
NC_011748.1	RefSeq	gene	909299	910186	.	-	.	ID=gene874;Name=rhtA;Dbxref=GeneID:7145949;gbkey=Gene;gene=rhtA;locus_tag=EC55989_0857
NC_011748.1	RefSeq	CDS	909299	910186	.	-	0	ID=cds810;Name=YP_002401954.1;Parent=gene874;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 12648727%2C 8021175%3B Product type t : transporter;Dbxref=Genbank:YP_002401954.1,GeneID:7145949;gbkey=CDS;product=threonine and homoserine efflux system;protein_id=YP_002401954.1;transl_table=11
NC_011748.1	RefSeq	gene	910539	911054	.	+	.	ID=gene875;Name=ompX;Dbxref=GeneID:7147406;gbkey=Gene;gene=ompX;locus_tag=EC55989_0858
NC_011748.1	RefSeq	CDS	910539	911054	.	+	0	ID=cds811;Name=YP_002401955.1;Parent=gene875;Note=OmpX%3B involved in cell adhesion%3B forms an eight-stranded antiparallel beta-barrel that protrudes from the cell surface%3B mutations in the gene increase cell-surface contact in fimbriated strains but decrease contact in nonfimbriated strains;Dbxref=Genbank:YP_002401955.1,GeneID:7147406;gbkey=CDS;product=outer membrane protein X;protein_id=YP_002401955.1;transl_table=11
NC_011748.1	RefSeq	gene	911103	912686	.	-	.	ID=gene876;Name=ybiP;Dbxref=GeneID:7147072;gbkey=Gene;gene=ybiP;locus_tag=EC55989_0859
NC_011748.1	RefSeq	CDS	911103	912686	.	-	0	ID=cds812;Name=YP_002401956.1;Parent=gene876;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 16514146%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002401956.1,GeneID:7147072;gbkey=CDS;product=enzyme%2C UPF0141 family%2C inner membrane;protein_id=YP_002401956.1;transl_table=11
NC_011748.1	RefSeq	gene	913041	913129	.	-	.	ID=gene877;Name=rybA;Dbxref=GeneID:7148212;gbkey=Gene;gene=rybA;locus_tag=EC55989_misc_RNA_18
NC_011748.1	RefSeq	transcript	913041	913129	.	-	.	ID=rna41;Parent=gene877;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type n : RNA;Dbxref=GeneID:7148212;gbkey=misc_RNA;product=RybA
NC_011748.1	RefSeq	exon	913041	913129	.	-	.	ID=id75;Parent=rna41;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type n : RNA;Dbxref=GeneID:7148212;gbkey=misc_RNA;product=RybA
NC_011748.1	RefSeq	gene	913272	913739	.	+	.	ID=gene878;Name=mntR;Dbxref=GeneID:7147572;gbkey=Gene;gene=mntR;locus_tag=EC55989_0860
NC_011748.1	RefSeq	CDS	913272	913739	.	+	0	ID=cds813;Name=YP_002401957.1;Parent=gene878;Note=Transcriptional regulator that represses the manganese transporter MntH when manganese is present;Dbxref=Genbank:YP_002401957.1,GeneID:7147572;gbkey=CDS;product=manganese transport regulator MntR;protein_id=YP_002401957.1;transl_table=11
NC_011748.1	RefSeq	gene	913736	914854	.	+	.	ID=gene879;Name=ybiR;Dbxref=GeneID:7146871;gbkey=Gene;gene=ybiR;locus_tag=EC55989_0861
NC_011748.1	RefSeq	CDS	913736	914854	.	+	0	ID=cds814;Name=YP_002401958.1;Parent=gene879;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002401958.1,GeneID:7146871;gbkey=CDS;product=transporter;protein_id=YP_002401958.1;transl_table=11
NC_011748.1	RefSeq	gene	914913	915833	.	-	.	ID=gene880;Name=ybiS;Dbxref=GeneID:7148213;gbkey=Gene;gene=ybiS;locus_tag=EC55989_0862
NC_011748.1	RefSeq	CDS	914913	915833	.	-	0	ID=cds815;Name=YP_002401959.1;Parent=gene880;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 10493123%2C 9298646;Dbxref=Genbank:YP_002401959.1,GeneID:7148213;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401959.1;transl_table=11
NC_011748.1	RefSeq	gene	916052	917644	.	+	.	ID=gene881;Name=ybiT;Dbxref=GeneID:7148214;gbkey=Gene;gene=ybiT;locus_tag=EC55989_0863
NC_011748.1	RefSeq	CDS	916052	917644	.	+	0	ID=cds816;Name=YP_002401960.1;Parent=gene881;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 11916677%3B Product type pt :  transporter;Dbxref=Genbank:YP_002401960.1,GeneID:7148214;gbkey=CDS;product=transporter fused subunits of ABC superfamily: ATP-binding components;protein_id=YP_002401960.1;transl_table=11
NC_011748.1	RefSeq	gene	917923	918903	.	+	.	ID=gene882;Name=EC55989_0865;Dbxref=GeneID:7148215;gbkey=Gene;locus_tag=EC55989_0865
NC_011748.1	RefSeq	CDS	917923	918903	.	+	0	ID=cds817;Name=YP_002401961.1;Parent=gene882;Note=Evidence 2b : Function of strongly homologous gene%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002401961.1,GeneID:7148215;gbkey=CDS;product=transposase%2C IS110 family;protein_id=YP_002401961.1;transl_table=11
NC_011748.1	RefSeq	gene	919159	920424	.	-	.	ID=gene883;Name=ybiU;Dbxref=GeneID:7144481;gbkey=Gene;gene=ybiU;locus_tag=EC55989_0866
NC_011748.1	RefSeq	CDS	919159	920424	.	-	0	ID=cds818;Name=YP_002401962.1;Parent=gene883;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002401962.1,GeneID:7144481;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401962.1;transl_table=11
NC_011748.1	RefSeq	gene	920576	921391	.	-	.	ID=gene884;Name=ybiV;Dbxref=GeneID:7148216;gbkey=Gene;gene=ybiV;locus_tag=EC55989_0867
NC_011748.1	RefSeq	CDS	920576	921391	.	-	0	ID=cds819;Name=YP_002401963.1;Parent=gene884;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 15657928%3B Product type e : enzyme;Dbxref=Genbank:YP_002401963.1,GeneID:7148216;gbkey=CDS;product=type II HAD phosphatase;protein_id=YP_002401963.1;transl_table=11
NC_011748.1	RefSeq	gene	921537	923969	.	-	.	ID=gene885;Name=ybiW;Dbxref=GeneID:7148217;gbkey=Gene;gene=ybiW;locus_tag=EC55989_0868
NC_011748.1	RefSeq	CDS	921537	923969	.	-	0	ID=cds820;Name=YP_002401964.1;Parent=gene885;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 16218870%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002401964.1,GeneID:7148217;gbkey=CDS;product=glycyl radical cofactor protein;protein_id=YP_002401964.1;transl_table=11
NC_011748.1	RefSeq	gene	923975	924901	.	-	.	ID=gene886;Name=ybiY;Dbxref=GeneID:7148218;gbkey=Gene;gene=ybiY;locus_tag=EC55989_0869
NC_011748.1	RefSeq	CDS	923975	924901	.	-	0	ID=cds821;Name=YP_002401965.1;Parent=gene886;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 15581584%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002401965.1,GeneID:7148218;gbkey=CDS;product=AdoMet-dependent glycyl radical activating enzyme;protein_id=YP_002401965.1;transl_table=11
NC_011748.1	RefSeq	gene	925005	925667	.	+	.	ID=gene887;Name=fsaA;Dbxref=GeneID:7148220;gbkey=Gene;gene=fsaA;locus_tag=EC55989_0870
NC_011748.1	RefSeq	CDS	925005	925667	.	+	0	ID=cds822;Name=YP_002401966.1;Parent=gene887;Note=similar to transaldolase from Escherichia coli%3B many organisms have multiple copies;Dbxref=Genbank:YP_002401966.1,GeneID:7148220;gbkey=CDS;product=fructose-6-phosphate aldolase;protein_id=YP_002401966.1;transl_table=11
NC_011748.1	RefSeq	gene	925755	926504	.	-	.	ID=gene888;Name=moeB;Dbxref=GeneID:7146206;gbkey=Gene;gene=moeB;locus_tag=EC55989_0871
NC_011748.1	RefSeq	CDS	925755	926504	.	-	0	ID=cds823;Name=YP_002401967.1;Parent=gene888;Note=ATP-dependent adenylate transferase%2C transfers adenyl moiety to the MoeD subunit of molybdopterin synthase;Dbxref=Genbank:YP_002401967.1,GeneID:7146206;gbkey=CDS;product=molybdopterin biosynthesis protein MoeB;protein_id=YP_002401967.1;transl_table=11
NC_011748.1	RefSeq	gene	926504	927739	.	-	.	ID=gene889;Name=moeA;Dbxref=GeneID:7146885;gbkey=Gene;gene=moeA;locus_tag=EC55989_0872
NC_011748.1	RefSeq	CDS	926504	927739	.	-	0	ID=cds824;Name=YP_002401968.1;Parent=gene889;Note=is involved in the formation of active molybdenum cofactor and the chelation of molybdenum;Dbxref=Genbank:YP_002401968.1,GeneID:7146885;gbkey=CDS;product=molybdopterin biosynthesis protein MoeA;protein_id=YP_002401968.1;transl_table=11
NC_011748.1	RefSeq	gene	927943	928908	.	+	.	ID=gene890;Name=iaaA;Dbxref=GeneID:7146884;gbkey=Gene;gene=iaaA;locus_tag=EC55989_0873
NC_011748.1	RefSeq	CDS	927943	928908	.	+	0	ID=cds825;Name=YP_002401969.1;Parent=gene890;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 15159592%2C 20508248%2C 3045084%2C 7984428%3B Product type e : enzyme;Dbxref=Genbank:YP_002401969.1,GeneID:7146884;gbkey=CDS;product=L-asparaginase;protein_id=YP_002401969.1;transl_table=11
NC_011748.1	RefSeq	gene	928928	930766	.	+	.	ID=gene891;Name=yliA;Dbxref=GeneID:7146528;gbkey=Gene;gene=yliA;locus_tag=EC55989_0874
NC_011748.1	RefSeq	CDS	928928	930766	.	+	0	ID=cds826;Name=YP_002401970.1;Parent=gene891;Note=with GsiBCD is involved in glutathione import%3B GsiA contains 2 ATP-binding domains;Dbxref=Genbank:YP_002401970.1,GeneID:7146528;gbkey=CDS;product=glutathione transporter ATP-binding protein;protein_id=YP_002401970.1;transl_table=11
NC_011748.1	RefSeq	gene	930786	932324	.	+	.	ID=gene892;Name=yliB;Dbxref=GeneID:7149252;gbkey=Gene;gene=yliB;locus_tag=EC55989_0875
NC_011748.1	RefSeq	CDS	930786	932324	.	+	0	ID=cds827;Name=YP_002401971.1;Parent=gene892;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 17366475%3B Product type pt :  transporter;Dbxref=Genbank:YP_002401971.1,GeneID:7149252;gbkey=CDS;product=peptide transporter subunit: periplasmic-binding component of ABC superfamily;protein_id=YP_002401971.1;transl_table=11
NC_011748.1	RefSeq	gene	932342	933262	.	+	.	ID=gene893;Name=yliC;Dbxref=GeneID:7149253;gbkey=Gene;gene=yliC;locus_tag=EC55989_0876
NC_011748.1	RefSeq	CDS	932342	933262	.	+	0	ID=cds828;Name=YP_002401972.1;Parent=gene893;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002401972.1,GeneID:7149253;gbkey=CDS;product=peptide transporter permease subunit: membrane component of ABC superfamily;protein_id=YP_002401972.1;transl_table=11
NC_011748.1	RefSeq	gene	933265	934176	.	+	.	ID=gene894;Name=yliD;Dbxref=GeneID:7149254;gbkey=Gene;gene=yliD;locus_tag=EC55989_0877
NC_011748.1	RefSeq	CDS	933265	934176	.	+	0	ID=cds829;Name=YP_002401973.1;Parent=gene894;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002401973.1,GeneID:7149254;gbkey=CDS;product=peptide transporter permease subunit: membrane component of ABC superfamily;protein_id=YP_002401973.1;transl_table=11
NC_011748.1	RefSeq	gene	934354	936702	.	+	.	ID=gene895;Name=yliE;Dbxref=GeneID:7149255;gbkey=Gene;gene=yliE;locus_tag=EC55989_0878
NC_011748.1	RefSeq	CDS	934354	936702	.	+	0	ID=cds830;Name=YP_002401974.1;Parent=gene895;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002401974.1,GeneID:7149255;gbkey=CDS;product=inner membrane protein;protein_id=YP_002401974.1;transl_table=11
NC_011748.1	RefSeq	gene	936710	938038	.	+	.	ID=gene896;Name=yliF;Dbxref=GeneID:7149256;gbkey=Gene;gene=yliF;locus_tag=EC55989_0879
NC_011748.1	RefSeq	CDS	936710	938038	.	+	0	ID=cds831;Name=YP_002401975.1;Parent=gene896;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 15380559%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002401975.1,GeneID:7149256;gbkey=CDS;product=diguanylate cyclase;protein_id=YP_002401975.1;transl_table=11
NC_011748.1	RefSeq	gene	938085	939410	.	-	.	ID=gene897;Name=rimO;Dbxref=GeneID:7149257;gbkey=Gene;gene=rimO;locus_tag=EC55989_0880
NC_011748.1	RefSeq	CDS	938085	939410	.	-	0	ID=cds832;Name=YP_002401976.1;Parent=gene897;Note=catalyzes the methylthiolation of an aspartic acid residue of the S12 protein of the 30S ribosomal subunit;Dbxref=Genbank:YP_002401976.1,GeneID:7149257;gbkey=CDS;product=ribosomal protein S12 methylthiotransferase;protein_id=YP_002401976.1;transl_table=11
NC_011748.1	RefSeq	gene	939623	940006	.	+	.	ID=gene898;Name=bssR;Dbxref=GeneID:7149258;gbkey=Gene;gene=bssR;locus_tag=EC55989_0881
NC_011748.1	RefSeq	CDS	939623	940006	.	+	0	ID=cds833;Name=YP_002401977.1;Parent=gene898;Note=BssS%3B regulator of biofilm through signal secretion%3B disruption of this gene in Escherichia coli led to effects on biofilm formation%2C alteration in expression of a number of genes and mutations in bssS led to defects in indole transport and autoinducer-2 uptake and processing;Dbxref=Genbank:YP_002401977.1,GeneID:7149258;gbkey=CDS;product=biofilm formation regulatory protein BssR;protein_id=YP_002401977.1;transl_table=11
NC_011748.1	RefSeq	gene	940117	941232	.	+	.	ID=gene899;Name=yliI;Dbxref=GeneID:7145637;gbkey=Gene;gene=yliI;locus_tag=EC55989_0882
NC_011748.1	RefSeq	CDS	940117	941232	.	+	0	ID=cds834;Name=YP_002401978.1;Parent=gene899;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 16522795%2C 16864586%3B Product type e : enzyme;Dbxref=Genbank:YP_002401978.1,GeneID:7145637;gbkey=CDS;product=PQQ-dependent aldose sugar dehydrogenase precursor %28asd%29;protein_id=YP_002401978.1;transl_table=11
NC_011748.1	RefSeq	gene	941229	941855	.	-	.	ID=gene900;Name=yliJ;Dbxref=GeneID:7149259;gbkey=Gene;gene=yliJ;locus_tag=EC55989_0883
NC_011748.1	RefSeq	CDS	941229	941855	.	-	0	ID=cds835;Name=YP_002401979.1;Parent=gene900;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002401979.1,GeneID:7149259;gbkey=CDS;product=glutathione S-transferase;protein_id=YP_002401979.1;transl_table=11
NC_011748.1	RefSeq	gene	942102	943304	.	+	.	ID=gene901;Name=dacC;Dbxref=GeneID:7149260;gbkey=Gene;gene=dacC;locus_tag=EC55989_0884
NC_011748.1	RefSeq	CDS	942102	943304	.	+	0	ID=cds836;Name=YP_002401980.1;Parent=gene901;Note=penicillin-binding protein 6a%3B removes C-terminal D-alanyl residues from sugar-peptide cell wall precursors%3B one of four%2C DD-carboxypeptidase low-molecular weight penicillin-binding proteins that remove terminal D-alanine from pentapeptide side chains;Dbxref=Genbank:YP_002401980.1,GeneID:7149260;gbkey=CDS;product=D-alanyl-D-alanine carboxypeptidase;protein_id=YP_002401980.1;transl_table=11
NC_011748.1	RefSeq	gene	943351	944109	.	-	.	ID=gene902;Name=deoR;Dbxref=GeneID:7145843;gbkey=Gene;gene=deoR;locus_tag=EC55989_0885
NC_011748.1	RefSeq	CDS	943351	944109	.	-	0	ID=cds837;Name=YP_002401981.1;Parent=gene902;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 89231635%2C 89336786%2C 92231401%2C 2994018%3B Product type r : regulator;Dbxref=Genbank:YP_002401981.1,GeneID:7145843;gbkey=CDS;product=DNA-binding transcriptional repressor DeoR;protein_id=YP_002401981.1;transl_table=11
NC_011748.1	RefSeq	gene	944167	944763	.	-	.	ID=gene903;Name=ybjG;Dbxref=GeneID:7145890;gbkey=Gene;gene=ybjG;locus_tag=EC55989_0886
NC_011748.1	RefSeq	CDS	944167	944763	.	-	0	ID=cds838;Name=YP_002401982.1;Parent=gene903;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 15778224%3B Product type e : enzyme;Dbxref=Genbank:YP_002401982.1,GeneID:7145890;gbkey=CDS;product=undecaprenyl pyrophosphate phosphatase;protein_id=YP_002401982.1;transl_table=11
NC_011748.1	RefSeq	gene	945048	946280	.	+	.	ID=gene904;Name=cmr;Dbxref=GeneID:7148224;gbkey=Gene;gene=cmr;locus_tag=EC55989_0887
NC_011748.1	RefSeq	CDS	945048	946280	.	+	0	ID=cds839;Name=YP_002401983.1;Parent=gene904;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 10022825%2C 12578981%2C 14688269%2C 21217867%2C 21450803%2C 9079913%2C 9644262%2C 99030337%2C 8655497%3B Product type t : transporter;Dbxref=Genbank:YP_002401983.1,GeneID:7148224;gbkey=CDS;product=multidrug efflux system protein;protein_id=YP_002401983.1;transl_table=11
NC_011748.1	RefSeq	gene	946321	946605	.	-	.	ID=gene905;Name=ybjH;Dbxref=GeneID:7145729;gbkey=Gene;gene=ybjH;locus_tag=EC55989_0888
NC_011748.1	RefSeq	CDS	946321	946605	.	-	0	ID=cds840;Name=YP_002401984.1;Parent=gene905;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002401984.1,GeneID:7145729;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401984.1;transl_table=11
NC_011748.1	RefSeq	gene	946691	947506	.	-	.	ID=gene906;Name=ybjI;Dbxref=GeneID:7148225;gbkey=Gene;gene=ybjI;locus_tag=EC55989_0889
NC_011748.1	RefSeq	CDS	946691	947506	.	-	0	ID=cds841;Name=YP_002401985.1;Parent=gene906;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 15808744%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002401985.1,GeneID:7148225;gbkey=CDS;product=phosphatase;protein_id=YP_002401985.1;transl_table=11
NC_011748.1	RefSeq	gene	947506	948714	.	-	.	ID=gene907;Name=ybjJ;Dbxref=GeneID:7148226;gbkey=Gene;gene=ybjJ;locus_tag=EC55989_0890
NC_011748.1	RefSeq	CDS	947506	948714	.	-	0	ID=cds842;Name=YP_002401986.1;Parent=gene907;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002401986.1,GeneID:7148226;gbkey=CDS;product=transporter;protein_id=YP_002401986.1;transl_table=11
NC_011748.1	RefSeq	gene	948798	949334	.	+	.	ID=gene908;Name=ybjK;Dbxref=GeneID:7148227;gbkey=Gene;gene=ybjK;locus_tag=EC55989_0891
NC_011748.1	RefSeq	CDS	948798	949334	.	+	0	ID=cds843;Name=YP_002401987.1;Parent=gene908;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pr :  regulator;Dbxref=Genbank:YP_002401987.1,GeneID:7148227;gbkey=CDS;product=DNA-binding transcriptional regulator;protein_id=YP_002401987.1;transl_table=11
NC_011748.1	RefSeq	gene	949354	949432	.	-	.	ID=gene909;Name=rybB;Dbxref=GeneID:7148228;gbkey=Gene;gene=rybB;locus_tag=EC55989_misc_RNA_19
NC_011748.1	RefSeq	transcript	949354	949432	.	-	.	ID=rna42;Parent=gene909;Note=Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism%3B PubMedId : 17427289%3B Product type n : RNA;Dbxref=GeneID:7148228;gbkey=misc_RNA;product=RybB
NC_011748.1	RefSeq	exon	949354	949432	.	-	.	ID=id76;Parent=rna42;Note=Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism%3B PubMedId : 17427289%3B Product type n : RNA;Dbxref=GeneID:7148228;gbkey=misc_RNA;product=RybB
NC_011748.1	RefSeq	gene	949509	951194	.	-	.	ID=gene910;Name=ybjL;Dbxref=GeneID:7147573;gbkey=Gene;gene=ybjL;locus_tag=EC55989_0892
NC_011748.1	RefSeq	CDS	949509	951194	.	-	0	ID=cds844;Name=YP_002401988.1;Parent=gene910;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002401988.1,GeneID:7147573;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401988.1;transl_table=11
NC_011748.1	RefSeq	gene	951464	951841	.	+	.	ID=gene911;Name=ybjM;Dbxref=GeneID:7148229;gbkey=Gene;gene=ybjM;locus_tag=EC55989_0893
NC_011748.1	RefSeq	CDS	951464	951841	.	+	0	ID=cds845;Name=YP_002401989.1;Parent=gene911;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002401989.1,GeneID:7148229;gbkey=CDS;product=inner membrane protein;protein_id=YP_002401989.1;transl_table=11
NC_011748.1	RefSeq	gene	951871	952128	.	-	.	ID=gene912;Name=grxA;Dbxref=GeneID:7148230;gbkey=Gene;gene=grxA;locus_tag=EC55989_0894
NC_011748.1	RefSeq	CDS	951871	952128	.	-	0	ID=cds846;Name=YP_002401990.1;Parent=gene912;Note=functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase%3B also involved in reducing some disulfides in a coupled system with glutathione reductase;Dbxref=Genbank:YP_002401990.1,GeneID:7148230;gbkey=CDS;product=glutaredoxin;protein_id=YP_002401990.1;transl_table=11
NC_011748.1	RefSeq	gene	952288	952575	.	+	.	ID=gene913;Name=ybjC;Dbxref=GeneID:7146370;gbkey=Gene;gene=ybjC;locus_tag=EC55989_0895
NC_011748.1	RefSeq	CDS	952288	952575	.	+	0	ID=cds847;Name=YP_002401991.1;Parent=gene913;Note=YbjC%3B located in the same operon as the nfsA gene%3B member of the soxRS regulon which mediates in part the increased levels of superoxide in response to oxidative stress%3B induced by paraquat%3B regulated by SoxS%3B unknown function;Dbxref=Genbank:YP_002401991.1,GeneID:7146370;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401991.1;transl_table=11
NC_011748.1	RefSeq	gene	952559	953281	.	+	.	ID=gene914;Name=nfsA;Dbxref=GeneID:7148221;gbkey=Gene;gene=nfsA;locus_tag=EC55989_0896
NC_011748.1	RefSeq	CDS	952559	953281	.	+	0	ID=cds848;Name=YP_002401992.1;Parent=gene914;Note=NADPH-dependent%3B oxygen-insensitive%3B catalyzes the reduction of nitroaromatic compounds;Dbxref=Genbank:YP_002401992.1,GeneID:7148221;gbkey=CDS;product=nitroreductase A;protein_id=YP_002401992.1;transl_table=11
NC_011748.1	RefSeq	gene	953342	954244	.	+	.	ID=gene915;Name=rimK;Dbxref=GeneID:7146990;gbkey=Gene;gene=rimK;locus_tag=EC55989_0897
NC_011748.1	RefSeq	CDS	953342	954244	.	+	0	ID=cds849;Name=YP_002401993.1;Parent=gene915;Note=responsible for the addition of glutamate residues to the C-terminus of ribosomal protein S6;Dbxref=Genbank:YP_002401993.1,GeneID:7146990;gbkey=CDS;product=ribosomal protein S6 modification protein;protein_id=YP_002401993.1;transl_table=11
NC_011748.1	RefSeq	gene	954332	954808	.	+	.	ID=gene916;Name=ybjN;Dbxref=GeneID:7147420;gbkey=Gene;gene=ybjN;locus_tag=EC55989_0898
NC_011748.1	RefSeq	CDS	954332	954808	.	+	0	ID=cds850;Name=YP_002401994.1;Parent=gene916;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002401994.1,GeneID:7147420;gbkey=CDS;product=hypothetical protein;protein_id=YP_002401994.1;transl_table=11
NC_011748.1	RefSeq	gene	955160	956272	.	+	.	ID=gene917;Name=potF;Dbxref=GeneID:7148231;gbkey=Gene;gene=potF;locus_tag=EC55989_0899
NC_011748.1	RefSeq	CDS	955160	956272	.	+	0	ID=cds851;Name=YP_002401995.1;Parent=gene917;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 93106992%2C 9651355%2C 9298646%2C 8416922%3B Product type t : transporter;Dbxref=Genbank:YP_002401995.1,GeneID:7148231;gbkey=CDS;product=putrescine ABC transporter periplasmic-binding protein;protein_id=YP_002401995.1;transl_table=11
NC_011748.1	RefSeq	gene	956367	957500	.	+	.	ID=gene918;Name=potG;Dbxref=GeneID:7147214;gbkey=Gene;gene=potG;locus_tag=EC55989_0900
NC_011748.1	RefSeq	CDS	956367	957500	.	+	0	ID=cds852;Name=YP_002401996.1;Parent=gene918;Note=part of the PotFGHI ATP-dependent putrescine transporter;Dbxref=Genbank:YP_002401996.1,GeneID:7147214;gbkey=CDS;product=putrescine ABC transporter ATP-binding protein;protein_id=YP_002401996.1;transl_table=11
NC_011748.1	RefSeq	gene	957510	958466	.	+	.	ID=gene919;Name=potH;Dbxref=GeneID:7147215;gbkey=Gene;gene=potH;locus_tag=EC55989_0901
NC_011748.1	RefSeq	CDS	957510	958466	.	+	0	ID=cds853;Name=YP_002401997.1;Parent=gene919;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 93106992%3B Product type t : transporter;Dbxref=Genbank:YP_002401997.1,GeneID:7147215;gbkey=CDS;product=putrescine ABC transporter membrane protein;protein_id=YP_002401997.1;transl_table=11
NC_011748.1	RefSeq	gene	958459	959304	.	+	.	ID=gene920;Name=potI;Dbxref=GeneID:7147216;gbkey=Gene;gene=potI;locus_tag=EC55989_0902
NC_011748.1	RefSeq	CDS	958459	959304	.	+	0	ID=cds854;Name=YP_002401998.1;Parent=gene920;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 93106992%3B Product type t : transporter;Dbxref=Genbank:YP_002401998.1,GeneID:7147216;gbkey=CDS;product=putrescine ABC transporter membrane protein;protein_id=YP_002401998.1;transl_table=11
NC_011748.1	RefSeq	gene	959364	959852	.	+	.	ID=gene921;Name=ybjO;Dbxref=GeneID:7147217;gbkey=Gene;gene=ybjO;locus_tag=EC55989_0903
NC_011748.1	RefSeq	CDS	959364	959852	.	+	0	ID=cds855;Name=YP_002401999.1;Parent=gene921;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002401999.1,GeneID:7147217;gbkey=CDS;product=inner membrane protein;protein_id=YP_002401999.1;transl_table=11
NC_011748.1	RefSeq	gene	959893	961020	.	+	.	ID=gene922;Name=rumB;Dbxref=GeneID:7148232;gbkey=Gene;gene=rumB;locus_tag=EC55989_0904
NC_011748.1	RefSeq	CDS	959893	961020	.	+	0	ID=cds856;Name=YP_002402000.1;Parent=gene922;Note=RNA uridine methyltransferase B%3B catalyzes the formation of 5-methyl-uridine at position 747 in 23S rRNA;Dbxref=Genbank:YP_002402000.1,GeneID:7148232;gbkey=CDS;product=23S rRNA methyluridine methyltransferase;protein_id=YP_002402000.1;transl_table=11
NC_011748.1	RefSeq	gene	961195	961926	.	-	.	ID=gene923;Name=artJ;Dbxref=GeneID:7147558;gbkey=Gene;gene=artJ;locus_tag=EC55989_0905
NC_011748.1	RefSeq	CDS	961195	961926	.	-	0	ID=cds857;Name=YP_002402001.1;Parent=gene923;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 93273744%2C 9298646%2C 9600841%2C 8801422%3B Product type t : transporter;Dbxref=Genbank:YP_002402001.1,GeneID:7147558;gbkey=CDS;product=arginine transporter subunit %3B periplasmic-binding component of ABC superfamily;protein_id=YP_002402001.1;transl_table=11
NC_011748.1	RefSeq	gene	962218	962886	.	-	.	ID=gene924;Name=artM;Dbxref=GeneID:7145556;gbkey=Gene;gene=artM;locus_tag=EC55989_0906
NC_011748.1	RefSeq	CDS	962218	962886	.	-	0	ID=cds858;Name=YP_002402002.1;Parent=gene924;Note=with ArtPQJI acts to transport arginine across the inner membrane;Dbxref=Genbank:YP_002402002.1,GeneID:7145556;gbkey=CDS;product=arginine transporter permease subunit ArtM;protein_id=YP_002402002.1;transl_table=11
NC_011748.1	RefSeq	gene	962886	963602	.	-	.	ID=gene925;Name=artQ;Dbxref=GeneID:7145557;gbkey=Gene;gene=artQ;locus_tag=EC55989_0907
NC_011748.1	RefSeq	CDS	962886	963602	.	-	0	ID=cds859;Name=YP_002402003.1;Parent=gene925;Note=with ArtPMJI transports arginine across the inner membrane;Dbxref=Genbank:YP_002402003.1,GeneID:7145557;gbkey=CDS;product=arginine transporter permease subunit ArtQ;protein_id=YP_002402003.1;transl_table=11
NC_011748.1	RefSeq	gene	963609	964340	.	-	.	ID=gene926;Name=artI;Dbxref=GeneID:7145559;gbkey=Gene;gene=artI;locus_tag=EC55989_0908
NC_011748.1	RefSeq	CDS	963609	964340	.	-	0	ID=cds860;Name=YP_002402004.1;Parent=gene926;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 93273744%2C 9298646%2C 9600841%2C 8801422%2C 9740056%3B Product type t : transporter;Dbxref=Genbank:YP_002402004.1,GeneID:7145559;gbkey=CDS;product=arginine transporter subunit %3B periplasmic-binding component of ABC superfamily;protein_id=YP_002402004.1;transl_table=11
NC_011748.1	RefSeq	gene	964358	965086	.	-	.	ID=gene927;Name=artP;Dbxref=GeneID:7145555;gbkey=Gene;gene=artP;locus_tag=EC55989_0909
NC_011748.1	RefSeq	CDS	964358	965086	.	-	0	ID=cds861;Name=YP_002402005.1;Parent=gene927;Note=With ArtMQJI transports arginine across the inner membrane;Dbxref=Genbank:YP_002402005.1,GeneID:7145555;gbkey=CDS;product=arginine transporter ATP-binding subunit;protein_id=YP_002402005.1;transl_table=11
NC_011748.1	RefSeq	gene	965304	965819	.	-	.	ID=gene928;Name=ybjP;Dbxref=GeneID:7145558;gbkey=Gene;gene=ybjP;locus_tag=EC55989_0910
NC_011748.1	RefSeq	CDS	965304	965819	.	-	0	ID=cds862;Name=YP_002402006.1;Parent=gene928;Note=induced during stationary phase and by acivicin %28a glutamine analog%29%3B regulated by Lrp and RpoS;Dbxref=Genbank:YP_002402006.1,GeneID:7145558;gbkey=CDS;product=lipoprotein;protein_id=YP_002402006.1;transl_table=11
NC_011748.1	RefSeq	gene	965945	966268	.	+	.	ID=gene929;Name=ybjQ;Dbxref=GeneID:7148233;gbkey=Gene;gene=ybjQ;locus_tag=EC55989_0911
NC_011748.1	RefSeq	CDS	965945	966268	.	+	0	ID=cds863;Name=YP_002402007.1;Parent=gene929;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402007.1,GeneID:7148233;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402007.1;transl_table=11
NC_011748.1	RefSeq	gene	966265	967095	.	+	.	ID=gene930;Name=ybjR;Dbxref=GeneID:7148234;gbkey=Gene;gene=ybjR;locus_tag=EC55989_0912
NC_011748.1	RefSeq	CDS	966265	967095	.	+	0	ID=cds864;Name=YP_002402008.1;Parent=gene930;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002402008.1,GeneID:7148234;gbkey=CDS;product=cell wall amidase and lipoprotein;protein_id=YP_002402008.1;transl_table=11
NC_011748.1	RefSeq	gene	967092	968105	.	-	.	ID=gene931;Name=ybjS;Dbxref=GeneID:7148235;gbkey=Gene;gene=ybjS;locus_tag=EC55989_0913
NC_011748.1	RefSeq	CDS	967092	968105	.	-	0	ID=cds865;Name=YP_002402009.1;Parent=gene931;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002402009.1,GeneID:7148235;gbkey=CDS;product=NAD%28P%29H-binding oxidoreductase with NAD%28P%29-binding Rossmann-fold domain;protein_id=YP_002402009.1;transl_table=11
NC_011748.1	RefSeq	gene	968204	969634	.	-	.	ID=gene932;Name=ybjT;Dbxref=GeneID:7148236;gbkey=Gene;gene=ybjT;locus_tag=EC55989_0914
NC_011748.1	RefSeq	CDS	968204	969634	.	-	0	ID=cds866;Name=YP_002402010.1;Parent=gene932;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402010.1,GeneID:7148236;gbkey=CDS;product=NAD%28P%29-binding Rossmann-fold domain;protein_id=YP_002402010.1;transl_table=11
NC_011748.1	RefSeq	gene	969645	970646	.	-	.	ID=gene933;Name=ltaE;Dbxref=GeneID:7148237;gbkey=Gene;gene=ltaE;locus_tag=EC55989_0915
NC_011748.1	RefSeq	CDS	969645	970646	.	-	0	ID=cds867;Name=YP_002402011.1;Parent=gene933;Note=low- specificity%3B catalyzes the formation of acetaldehyde and glycine from L-threonine%3B acts on L-threonine%2C L-allo-threonine%2C L-threo-phenylserine%2C and L-erythro-phenylserine;Dbxref=Genbank:YP_002402011.1,GeneID:7148237;gbkey=CDS;product=L-threonine aldolase;protein_id=YP_002402011.1;transl_table=11
NC_011748.1	RefSeq	gene	970683	972401	.	-	.	ID=gene934;Name=poxB;Dbxref=GeneID:7146753;gbkey=Gene;gene=poxB;locus_tag=EC55989_0916
NC_011748.1	RefSeq	CDS	970683	972401	.	-	0	ID=cds868;Name=YP_002402012.1;Parent=gene934;Note=catalyzes the formation of acetate from pyruvate;Dbxref=Genbank:YP_002402012.1,GeneID:7146753;gbkey=CDS;product=pyruvate dehydrogenase;protein_id=YP_002402012.1;transl_table=11
NC_011748.1	RefSeq	gene	972534	973502	.	-	.	ID=gene935;Name=hcr;Dbxref=GeneID:7147219;gbkey=Gene;gene=hcr;locus_tag=EC55989_0917
NC_011748.1	RefSeq	CDS	972534	973502	.	-	0	ID=cds869;Name=YP_002402013.1;Parent=gene935;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 20117674%3B Product type e : enzyme;Dbxref=Genbank:YP_002402013.1,GeneID:7147219;gbkey=CDS;product=HCP oxidoreductase;protein_id=YP_002402013.1;transl_table=11
NC_011748.1	RefSeq	gene	973514	975166	.	-	.	ID=gene936;Name=hcp;Dbxref=GeneID:7146399;gbkey=Gene;gene=hcp;locus_tag=EC55989_0918
NC_011748.1	RefSeq	CDS	973514	975166	.	-	0	ID=cds870;Name=YP_002402014.1;Parent=gene936;Note=catalyzes the reduction of hydroxylamine to ammonia and water;Dbxref=Genbank:YP_002402014.1,GeneID:7146399;gbkey=CDS;product=hydroxylamine reductase;protein_id=YP_002402014.1;transl_table=11
NC_011748.1	RefSeq	STS	973836	974092	.	+	.	ID=id77;Dbxref=UniSTS:19821;gbkey=STS
NC_011748.1	RefSeq	gene	975310	976209	.	-	.	ID=gene937;Name=ybjE;Dbxref=GeneID:7146398;gbkey=Gene;gene=ybjE;locus_tag=EC55989_0919
NC_011748.1	RefSeq	CDS	975310	976209	.	-	0	ID=cds871;Name=YP_002402015.1;Parent=gene937;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002402015.1,GeneID:7146398;gbkey=CDS;product=transporter;protein_id=YP_002402015.1;transl_table=11
NC_011748.1	RefSeq	gene	976704	977399	.	-	.	ID=gene938;Name=aqpZ;Dbxref=GeneID:7148223;gbkey=Gene;gene=aqpZ;locus_tag=EC55989_0920
NC_011748.1	RefSeq	CDS	976704	977399	.	-	0	ID=cds872;Name=YP_002402016.1;Parent=gene938;Note=porin involved in osmoregulation allowing water to move into and out of the cell in response to osmotic pressure;Dbxref=Genbank:YP_002402016.1,GeneID:7148223;gbkey=CDS;product=aquaporin Z;protein_id=YP_002402016.1;transl_table=11
NC_011748.1	RefSeq	gene	977825	979483	.	+	.	ID=gene939;Name=ybjD;Dbxref=GeneID:7145512;gbkey=Gene;gene=ybjD;locus_tag=EC55989_0921
NC_011748.1	RefSeq	CDS	977825	979483	.	+	0	ID=cds873;Name=YP_002402017.1;Parent=gene939;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402017.1,GeneID:7145512;gbkey=CDS;product=nucleoside triphosphate hydrolase domain;protein_id=YP_002402017.1;transl_table=11
NC_011748.1	RefSeq	gene	979480	980472	.	-	.	ID=gene940;Name=ybjX;Dbxref=GeneID:7148222;gbkey=Gene;gene=ybjX;locus_tag=EC55989_0922
NC_011748.1	RefSeq	CDS	979480	980472	.	-	0	ID=cds874;Name=YP_002402018.1;Parent=gene940;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402018.1,GeneID:7148222;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402018.1;transl_table=11
NC_011748.1	RefSeq	gene	980587	981702	.	+	.	ID=gene941;Name=macA;Dbxref=GeneID:7148238;gbkey=Gene;gene=macA;locus_tag=EC55989_0923
NC_011748.1	RefSeq	CDS	980587	981702	.	+	0	ID=cds875;Name=YP_002402019.1;Parent=gene941;Note=confers macrolide resistance via active drug efflux;Dbxref=Genbank:YP_002402019.1,GeneID:7148238;gbkey=CDS;product=macrolide transporter subunit MacA;protein_id=YP_002402019.1;transl_table=11
NC_011748.1	RefSeq	gene	981699	983645	.	+	.	ID=gene942;Name=macB;Dbxref=GeneID:7146764;gbkey=Gene;gene=macB;locus_tag=EC55989_0924
NC_011748.1	RefSeq	CDS	981699	983645	.	+	0	ID=cds876;Name=YP_002402020.1;Parent=gene942;Note=with MacA is involved in the export of macrolide;Dbxref=Genbank:YP_002402020.1,GeneID:7146764;gbkey=CDS;product=macrolide transporter ATP-binding %2Fpermease;protein_id=YP_002402020.1;transl_table=11
NC_011748.1	RefSeq	gene	983718	983942	.	-	.	ID=gene943;Name=cspD;Dbxref=GeneID:7146765;gbkey=Gene;gene=cspD;locus_tag=EC55989_0925
NC_011748.1	RefSeq	CDS	983718	983942	.	-	0	ID=cds877;Name=YP_002402021.1;Parent=gene943;Note=inhibits DNA replication at both initiation and elongation steps%3B stationary phase and starvation inducible;Dbxref=Genbank:YP_002402021.1,GeneID:7146765;gbkey=CDS;product=stationary phase%2Fstarvation inducible regulatory protein CspD;protein_id=YP_002402021.1;transl_table=11
NC_011748.1	RefSeq	STS	983783	983944	.	+	.	ID=id78;Dbxref=UniSTS:55432;gbkey=STS
NC_011748.1	RefSeq	gene	984265	984585	.	+	.	ID=gene944;Name=clpS;Dbxref=GeneID:7145779;gbkey=Gene;gene=clpS;locus_tag=EC55989_0926
NC_011748.1	RefSeq	CDS	984265	984585	.	+	0	ID=cds878;Name=YP_002402022.1;Parent=gene944;Note=involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation%3B binds to the N-terminal domain of the chaperone ClpA;Dbxref=Genbank:YP_002402022.1,GeneID:7145779;gbkey=CDS;product=ATP-dependent Clp protease adaptor protein ClpS;protein_id=YP_002402022.1;transl_table=11
NC_011748.1	RefSeq	gene	984616	986892	.	+	.	ID=gene945;Name=clpA;Dbxref=GeneID:7145725;gbkey=Gene;gene=clpA;locus_tag=EC55989_0927
NC_011748.1	RefSeq	CDS	984616	986892	.	+	0	ID=cds879;Name=YP_002402023.1;Parent=gene945;Note=ATPase and specificity subunit of the ClpA-ClpP ATP dependent serine protease%3B directs protease to specific substrates;Dbxref=Genbank:YP_002402023.1,GeneID:7145725;gbkey=CDS;product=ATP-dependent Clp protease ATP-binding subunit;protein_id=YP_002402023.1;transl_table=11
NC_011748.1	RefSeq	gene	987236	987323	.	-	.	ID=gene946;Name=EC55989_tRNA87;Dbxref=GeneID:7145722;gbkey=Gene;locus_tag=EC55989_tRNA87
NC_011748.1	RefSeq	tRNA	987236	987323	.	-	.	ID=rna43;Dbxref=GeneID:7145722;gbkey=tRNA;product=tRNA-Ser
NC_011748.1	RefSeq	exon	987236	987323	.	-	.	ID=id79;Parent=rna43;Dbxref=GeneID:7145722;gbkey=tRNA;product=tRNA-Ser
NC_011748.1	RefSeq	gene	987576	987794	.	-	.	ID=gene947;Name=infA;Dbxref=GeneID:7145402;gbkey=Gene;gene=infA;locus_tag=EC55989_0929
NC_011748.1	RefSeq	CDS	987576	987794	.	-	0	ID=cds880;Name=YP_002402024.1;Parent=gene947;Note=stimulates the activities of the other two initiation factors%2C IF-2 and IF-3;Dbxref=Genbank:YP_002402024.1,GeneID:7145402;gbkey=CDS;product=translation initiation factor IF-1;protein_id=YP_002402024.1;transl_table=11
NC_011748.1	RefSeq	gene	988079	988783	.	-	.	ID=gene948;Name=aat;Dbxref=GeneID:7146565;gbkey=Gene;gene=aat;locus_tag=EC55989_0930
NC_011748.1	RefSeq	CDS	988079	988783	.	-	0	ID=cds881;Name=YP_002402025.1;Parent=gene948;Note=leucyltransferase%3B phenylalanyltransferse%3B functions in the N-end rule pathway%3B transfers Leu%2C Phe%2C Met%2C from aminoacyl-tRNAs to N-terminal of proteins with Arg or Lys;Dbxref=Genbank:YP_002402025.1,GeneID:7146565;gbkey=CDS;product=leucyl%2Fphenylalanyl-tRNA--protein transferase;protein_id=YP_002402025.1;transl_table=11
NC_011748.1	RefSeq	gene	988825	990546	.	-	.	ID=gene949;Name=cydC;Dbxref=GeneID:7145421;gbkey=Gene;gene=cydC;locus_tag=EC55989_0931
NC_011748.1	RefSeq	CDS	988825	990546	.	-	0	ID=cds882;Name=YP_002402026.1;Parent=gene949;Note=in Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance%3B important for cytochrome bd and c;Dbxref=Genbank:YP_002402026.1,GeneID:7145421;gbkey=CDS;product=cysteine%2Fglutathione ABC transporter membrane%2FATP-binding protein;protein_id=YP_002402026.1;transl_table=11
NC_011748.1	RefSeq	gene	990547	992313	.	-	.	ID=gene950;Name=cydD;Dbxref=GeneID:7145809;gbkey=Gene;gene=cydD;locus_tag=EC55989_0932
NC_011748.1	RefSeq	CDS	990547	992313	.	-	0	ID=cds883;Name=YP_002402027.1;Parent=gene950;Note=in Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance%3B important for cytochrome bd and c;Dbxref=Genbank:YP_002402027.1,GeneID:7145809;gbkey=CDS;product=cysteine%2Fglutathione ABC transporter membrane%2FATP-binding protein;protein_id=YP_002402027.1;transl_table=11
NC_011748.1	RefSeq	gene	992436	993401	.	-	.	ID=gene951;Name=trxB;Dbxref=GeneID:7145810;gbkey=Gene;gene=trxB;locus_tag=EC55989_0933
NC_011748.1	RefSeq	CDS	992436	993401	.	-	0	ID=cds884;Name=YP_002402028.1;Parent=gene951;Note=catalyzes the transfer of electrons from NADPH to thioredoxin%3B FAD%2FNAD%28P%29 binding;Dbxref=Genbank:YP_002402028.1,GeneID:7145810;gbkey=CDS;product=thioredoxin reductase;protein_id=YP_002402028.1;transl_table=11
NC_011748.1	RefSeq	gene	993946	994440	.	+	.	ID=gene952;Name=lrp;Dbxref=GeneID:7147863;gbkey=Gene;gene=lrp;locus_tag=EC55989_0934
NC_011748.1	RefSeq	CDS	993946	994440	.	+	0	ID=cds885;Name=YP_002402029.1;Parent=gene952;Note=mediates a global response to leucine%3B acts as a regulator for several genes involved in the high-affinity branched-chain amino acid transport system;Dbxref=Genbank:YP_002402029.1,GeneID:7147863;gbkey=CDS;product=leucine-responsive transcriptional regulator;protein_id=YP_002402029.1;transl_table=11
NC_011748.1	RefSeq	gene	994575	998642	.	+	.	ID=gene953;Name=ftsK;Dbxref=GeneID:7146744;gbkey=Gene;gene=ftsK;locus_tag=EC55989_0935
NC_011748.1	RefSeq	CDS	994575	998642	.	+	0	ID=cds886;Name=YP_002402030.1;Parent=gene953;Note=DNA-binding membrane protein required for chromosome resolution and partitioning;Dbxref=Genbank:YP_002402030.1,GeneID:7146744;gbkey=CDS;product=DNA translocase FtsK;protein_id=YP_002402030.1;transl_table=11
NC_011748.1	RefSeq	gene	998794	999408	.	+	.	ID=gene954;Name=lolA;Dbxref=GeneID:7146215;gbkey=Gene;gene=lolA;locus_tag=EC55989_0936
NC_011748.1	RefSeq	CDS	998794	999408	.	+	0	ID=cds887;Name=YP_002402031.1;Parent=gene954;Note=participates with LolB in the incorporation of lipoprotein into the outer membrane;Dbxref=Genbank:YP_002402031.1,GeneID:7146215;gbkey=CDS;product=outer-membrane lipoprotein carrier protein;protein_id=YP_002402031.1;transl_table=11
NC_011748.1	RefSeq	gene	999419	1000762	.	+	.	ID=gene955;Name=ycaJ;Dbxref=GeneID:7146715;gbkey=Gene;gene=ycaJ;locus_tag=EC55989_0937
NC_011748.1	RefSeq	CDS	999419	1000762	.	+	0	ID=cds888;Name=YP_002402032.1;Parent=gene955;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 7567469%2C 7628437%2C 11459952%2C 11029431%3B Product type cp : cell process;Dbxref=Genbank:YP_002402032.1,GeneID:7146715;gbkey=CDS;product=recombination factor protein RarA;protein_id=YP_002402032.1;transl_table=11
NC_011748.1	RefSeq	gene	1000853	1002145	.	+	.	ID=gene956;Name=serS;Dbxref=GeneID:7148243;gbkey=Gene;gene=serS;locus_tag=EC55989_0938
NC_011748.1	RefSeq	CDS	1000853	1002145	.	+	0	ID=cds889;Name=YP_002402033.1;Parent=gene956;Note=catalyzes a two-step reaction%2C first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA;Dbxref=Genbank:YP_002402033.1,GeneID:7148243;gbkey=CDS;product=seryl-tRNA synthetase;protein_id=YP_002402033.1;transl_table=11
NC_011748.1	RefSeq	gene	1002384	1004828	.	+	.	ID=gene957;Name=dmsA;Dbxref=GeneID:7147635;gbkey=Gene;gene=dmsA;locus_tag=EC55989_0939
NC_011748.1	RefSeq	CDS	1002384	1004828	.	+	0	ID=cds890;Name=YP_002402034.1;Parent=gene957;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 91008971%2C 92011349%2C 94171715%2C 10801884%2C 3062312%3B Product type e : enzyme;Dbxref=Genbank:YP_002402034.1,GeneID:7147635;gbkey=CDS;product=dimethyl sulfoxide reductase%2C anaerobic subunit A;protein_id=YP_002402034.1;transl_table=11
NC_011748.1	RefSeq	gene	1004839	1005456	.	+	.	ID=gene958;Name=dmsB;Dbxref=GeneID:7145928;gbkey=Gene;gene=dmsB;locus_tag=EC55989_0940
NC_011748.1	RefSeq	CDS	1004839	1005456	.	+	0	ID=cds891;Name=YP_002402035.1;Parent=gene958;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 91070067%2C 91355180%2C 92011349%2C 3062312%3B Product type e : enzyme;Dbxref=Genbank:YP_002402035.1,GeneID:7145928;gbkey=CDS;product=dimethyl sulfoxide reductase%2C anaerobic subunit B;protein_id=YP_002402035.1;transl_table=11
NC_011748.1	RefSeq	gene	1005458	1006321	.	+	.	ID=gene959;Name=dmsC;Dbxref=GeneID:7145929;gbkey=Gene;gene=dmsC;locus_tag=EC55989_0941
NC_011748.1	RefSeq	CDS	1005458	1006321	.	+	0	ID=cds892;Name=YP_002402036.1;Parent=gene959;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 91008971%2C 92011349%2C 3062312%2C 8429002%3B Product type e : enzyme;Dbxref=Genbank:YP_002402036.1,GeneID:7145929;gbkey=CDS;product=dimethyl sulfoxide reductase%2C anaerobic subunit C;protein_id=YP_002402036.1;transl_table=11
NC_011748.1	RefSeq	gene	1006357	1006983	.	-	.	ID=gene960;Name=ycaC;Dbxref=GeneID:7145930;gbkey=Gene;gene=ycaC;locus_tag=EC55989_0942
NC_011748.1	RefSeq	CDS	1006357	1006983	.	-	0	ID=cds893;Name=YP_002402037.1;Parent=gene960;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 9782055%2C 3062312%2C 11714269%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002402037.1,GeneID:7145930;gbkey=CDS;product=hydrolase;protein_id=YP_002402037.1;transl_table=11
NC_011748.1	RefSeq	gene	1007297	1008445	.	+	.	ID=gene961;Name=ycaD;Dbxref=GeneID:7148240;gbkey=Gene;gene=ycaD;locus_tag=EC55989_0943
NC_011748.1	RefSeq	CDS	1007297	1008445	.	+	0	ID=cds894;Name=YP_002402038.1;Parent=gene961;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002402038.1,GeneID:7148240;gbkey=CDS;product=MFS family transporter protein;protein_id=YP_002402038.1;transl_table=11
NC_011748.1	RefSeq	gene	1008655	1010085	.	+	.	ID=gene962;Name=ycaM;Dbxref=GeneID:7148241;gbkey=Gene;gene=ycaM;locus_tag=EC55989_0944
NC_011748.1	RefSeq	CDS	1008655	1010085	.	+	0	ID=cds895;Name=YP_002402039.1;Parent=gene962;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 15380559%3B Product type pt :  transporter;Dbxref=Genbank:YP_002402039.1,GeneID:7148241;gbkey=CDS;product=transporter;protein_id=YP_002402039.1;transl_table=11
NC_011748.1	RefSeq	gene	1010086	1010994	.	-	.	ID=gene963;Name=ycaN;Dbxref=GeneID:7148246;gbkey=Gene;gene=ycaN;locus_tag=EC55989_0945
NC_011748.1	RefSeq	CDS	1010086	1010994	.	-	0	ID=cds896;Name=YP_002402040.1;Parent=gene963;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pr :  regulator;Dbxref=Genbank:YP_002402040.1,GeneID:7148246;gbkey=CDS;product=DNA-binding transcriptional regulator;protein_id=YP_002402040.1;transl_table=11
NC_011748.1	RefSeq	gene	1011094	1011684	.	+	.	ID=gene964;Name=ycaK;Dbxref=GeneID:7148247;gbkey=Gene;gene=ycaK;locus_tag=EC55989_0946
NC_011748.1	RefSeq	CDS	1011094	1011684	.	+	0	ID=cds897;Name=YP_002402041.1;Parent=gene964;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 3053170%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002402041.1,GeneID:7148247;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402041.1;transl_table=11
NC_011748.1	RefSeq	gene	1011766	1012506	.	-	.	ID=gene965;Name=pflA;Dbxref=GeneID:7148244;gbkey=Gene;gene=pflA;locus_tag=EC55989_0947
NC_011748.1	RefSeq	CDS	1011766	1012506	.	-	0	ID=cds898;Name=YP_002402042.1;Parent=gene965;Note=activates pyruvate formate-lyase 1 under anaerobic conditions;Dbxref=Genbank:YP_002402042.1,GeneID:7148244;gbkey=CDS;product=pyruvate formate lyase-activating enzyme 1;protein_id=YP_002402042.1;transl_table=11
NC_011748.1	RefSeq	gene	1012698	1014980	.	-	.	ID=gene966;Name=pflB;Dbxref=GeneID:7147141;gbkey=Gene;gene=pflB;locus_tag=EC55989_0948
NC_011748.1	RefSeq	CDS	1012698	1014980	.	-	0	ID=cds899;Name=YP_002402043.1;Parent=gene966;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 91064082%2C 92276323%2C 10504733%2C 1310545%2C 2651404%2C 3053170%2C 9629924%3B Product type e : enzyme;Dbxref=Genbank:YP_002402043.1,GeneID:7147141;gbkey=CDS;product=pyruvate formate lyase I;protein_id=YP_002402043.1;transl_table=11
NC_011748.1	RefSeq	gene	1015035	1015892	.	-	.	ID=gene967;Name=focA;Dbxref=GeneID:7147142;gbkey=Gene;gene=focA;locus_tag=EC55989_0949
NC_011748.1	RefSeq	CDS	1015035	1015892	.	-	0	ID=cds900;Name=YP_002402044.1;Parent=gene967;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 94293770%2C 2651404%3B Product type t : transporter;Dbxref=Genbank:YP_002402044.1,GeneID:7147142;gbkey=CDS;product=formate transporter;protein_id=YP_002402044.1;transl_table=11
NC_011748.1	RefSeq	gene	1016297	1018057	.	-	.	ID=gene968;Name=ycaO;Dbxref=GeneID:7146166;gbkey=Gene;gene=ycaO;locus_tag=EC55989_0950
NC_011748.1	RefSeq	CDS	1016297	1018057	.	-	0	ID=cds901;Name=YP_002402045.1;Parent=gene968;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402045.1,GeneID:7146166;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402045.1;transl_table=11
NC_011748.1	RefSeq	gene	1018187	1018879	.	+	.	ID=gene969;Name=ycaP;Dbxref=GeneID:7148248;gbkey=Gene;gene=ycaP;locus_tag=EC55989_0951
NC_011748.1	RefSeq	CDS	1018187	1018879	.	+	0	ID=cds902;Name=YP_002402046.1;Parent=gene969;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002402046.1,GeneID:7148248;gbkey=CDS;product=inner membrane protein;protein_id=YP_002402046.1;transl_table=11
NC_011748.1	RefSeq	gene	1019078	1020166	.	+	.	ID=gene970;Name=serC;Dbxref=GeneID:7148249;gbkey=Gene;gene=serC;locus_tag=EC55989_0952
NC_011748.1	RefSeq	CDS	1019078	1020166	.	+	0	ID=cds903;Name=YP_002402047.1;Parent=gene970;Note=catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate%3B required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine;Dbxref=Genbank:YP_002402047.1,GeneID:7148249;gbkey=CDS;product=phosphoserine aminotransferase;protein_id=YP_002402047.1;transl_table=11
NC_011748.1	RefSeq	gene	1020237	1021520	.	+	.	ID=gene971;Name=aroA;Dbxref=GeneID:7147634;gbkey=Gene;gene=aroA;locus_tag=EC55989_0953
NC_011748.1	RefSeq	CDS	1020237	1021520	.	+	0	ID=cds904;Name=YP_002402048.1;Parent=gene971;Note=catalyzes the formation of 5-O-%281-carboxyvinyl%29-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis;Dbxref=Genbank:YP_002402048.1,GeneID:7147634;gbkey=CDS;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=YP_002402048.1;transl_table=11
NC_011748.1	RefSeq	gene	1021689	1022453	.	+	.	ID=gene972;Name=ycaL;Dbxref=GeneID:7145539;gbkey=Gene;gene=ycaL;locus_tag=EC55989_0954
NC_011748.1	RefSeq	CDS	1021689	1022453	.	+	0	ID=cds905;Name=YP_002402049.1;Parent=gene972;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pf :  factor;Dbxref=Genbank:YP_002402049.1,GeneID:7145539;gbkey=CDS;product=lipoprotein with metallohydrolase domain;protein_id=YP_002402049.1;transl_table=11
NC_011748.1	RefSeq	gene	1022626	1023309	.	+	.	ID=gene973;Name=cmk;Dbxref=GeneID:7148245;gbkey=Gene;gene=cmk;locus_tag=EC55989_0955
NC_011748.1	RefSeq	CDS	1022626	1023309	.	+	0	ID=cds906;Name=YP_002402050.1;Parent=gene973;Note=Catalyzes the formation of %28d%29CDP from ATP and %28d%29CMP;Dbxref=Genbank:YP_002402050.1,GeneID:7148245;gbkey=CDS;product=cytidylate kinase;protein_id=YP_002402050.1;transl_table=11
NC_011748.1	RefSeq	gene	1023420	1025093	.	+	.	ID=gene974;Name=rpsA;Dbxref=GeneID:7145728;gbkey=Gene;gene=rpsA;locus_tag=EC55989_0956
NC_011748.1	RefSeq	CDS	1023420	1025093	.	+	0	ID=cds907;Name=YP_002402051.1;Parent=gene974;Note=in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit%3B autoregulates expression via a C-terminal domain%3B in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats%3B the S1 nucleic acid-binding domain is found associated with other proteins;Dbxref=Genbank:YP_002402051.1,GeneID:7145728;gbkey=CDS;product=30S ribosomal protein S1;protein_id=YP_002402051.1;transl_table=11
NC_011748.1	RefSeq	gene	1025253	1025537	.	+	.	ID=gene975;Name=ihfB;Dbxref=GeneID:7147505;gbkey=Gene;gene=ihfB;locus_tag=EC55989_0957
NC_011748.1	RefSeq	CDS	1025253	1025537	.	+	0	ID=cds908;Name=YP_002402052.1;Parent=gene975;Note=This protein is one of the two subunits of integration host factor%2C a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control;Dbxref=Genbank:YP_002402052.1,GeneID:7147505;gbkey=CDS;product=integration host factor subunit beta;protein_id=YP_002402052.1;transl_table=11
NC_011748.1	RefSeq	gene	1025744	1028008	.	+	.	ID=gene976;Name=ycaI;Dbxref=GeneID:7146547;gbkey=Gene;gene=ycaI;locus_tag=EC55989_0958
NC_011748.1	RefSeq	CDS	1025744	1028008	.	+	0	ID=cds909;Name=YP_002402053.1;Parent=gene976;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002402053.1,GeneID:7146547;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402053.1;transl_table=11
NC_011748.1	RefSeq	gene	1028045	1029793	.	+	.	ID=gene977;Name=msbA;Dbxref=GeneID:7148242;gbkey=Gene;gene=msbA;locus_tag=EC55989_0959
NC_011748.1	RefSeq	CDS	1028045	1029793	.	+	0	ID=cds910;Name=YP_002402054.1;Parent=gene977;Note=involved in the transport of lipid A across the inner membrane;Dbxref=Genbank:YP_002402054.1,GeneID:7148242;gbkey=CDS;product=lipid transporter ATP-binding%2Fpermease;protein_id=YP_002402054.1;transl_table=11
NC_011748.1	RefSeq	gene	1029790	1030776	.	+	.	ID=gene978;Name=lpxK;Dbxref=GeneID:7146906;gbkey=Gene;gene=lpxK;locus_tag=EC55989_0960
NC_011748.1	RefSeq	CDS	1029790	1030776	.	+	0	ID=cds911;Name=YP_002402055.1;Parent=gene978;Note=transfers the gamma-phosphate of ATP to the 4%27 position of a tetraacyldisaccharide 1-phosphate intermediate to form tetraacyldisaccharide 1%2C4%27-bis-phosphate;Dbxref=Genbank:YP_002402055.1,GeneID:7146906;gbkey=CDS;product=tetraacyldisaccharide 4%27-kinase;protein_id=YP_002402055.1;transl_table=11
NC_011748.1	RefSeq	gene	1030813	1032045	.	+	.	ID=gene979;Name=ycaQ;Dbxref=GeneID:7146740;gbkey=Gene;gene=ycaQ;locus_tag=EC55989_0961
NC_011748.1	RefSeq	CDS	1030813	1032045	.	+	0	ID=cds912;Name=YP_002402056.1;Parent=gene979;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402056.1,GeneID:7146740;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402056.1;transl_table=11
NC_011748.1	RefSeq	gene	1032097	1032279	.	+	.	ID=gene980;Name=ycaR;Dbxref=GeneID:7148250;gbkey=Gene;gene=ycaR;locus_tag=EC55989_0962
NC_011748.1	RefSeq	CDS	1032097	1032279	.	+	0	ID=cds913;Name=YP_002402057.1;Parent=gene980;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402057.1,GeneID:7148250;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402057.1;transl_table=11
NC_011748.1	RefSeq	gene	1032276	1033022	.	+	.	ID=gene981;Name=kdsB;Dbxref=GeneID:7148251;gbkey=Gene;gene=kdsB;locus_tag=EC55989_0963
NC_011748.1	RefSeq	CDS	1032276	1033022	.	+	0	ID=cds914;Name=YP_002402058.1;Parent=gene981;Note=CMP-2-keto-3-deoxyoctulosonic acid synthetase%3B catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS;Dbxref=Genbank:YP_002402058.1,GeneID:7148251;gbkey=CDS;product=3-deoxy-manno-octulosonate cytidylyltransferase;protein_id=YP_002402058.1;transl_table=11
NC_011748.1	RefSeq	gene	1033176	1034069	.	+	.	ID=gene982;Name=ycbJ;Dbxref=GeneID:7146660;gbkey=Gene;gene=ycbJ;locus_tag=EC55989_0964
NC_011748.1	RefSeq	CDS	1033176	1034069	.	+	0	ID=cds915;Name=YP_002402059.1;Parent=gene982;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402059.1,GeneID:7146660;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402059.1;transl_table=11
NC_011748.1	RefSeq	gene	1034046	1034825	.	-	.	ID=gene983;Name=ycbC;Dbxref=GeneID:7148256;gbkey=Gene;gene=ycbC;locus_tag=EC55989_0965
NC_011748.1	RefSeq	CDS	1034046	1034825	.	-	0	ID=cds916;Name=YP_002402060.1;Parent=gene983;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002402060.1,GeneID:7148256;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402060.1;transl_table=11
NC_011748.1	RefSeq	gene	1034728	1034892	.	-	.	ID=gene984;Name=EC55989_0966;Dbxref=GeneID:7148253;gbkey=Gene;locus_tag=EC55989_0966
NC_011748.1	RefSeq	CDS	1034728	1034892	.	-	0	ID=cds917;Name=YP_002402061.1;Parent=gene984;Note=Evidence 6 : Doubtful CDS;Dbxref=Genbank:YP_002402061.1,GeneID:7148253;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402061.1;transl_table=11
NC_011748.1	RefSeq	gene	1034961	1035746	.	+	.	ID=gene985;Name=smtA;Dbxref=GeneID:7144482;gbkey=Gene;gene=smtA;locus_tag=EC55989_0967
NC_011748.1	RefSeq	CDS	1034961	1035746	.	+	0	ID=cds918;Name=YP_002402062.1;Parent=gene985;Note=involved in cellular zinc and cadmium homeostasis by binding excess metal ions to its cysteine sulfurs and histidine nitrogens%3B expression of smtA in cyanobacteria is repressed by SmtB at low concentrations of zinc%3B NO elicits release of Zn ions from SmtA;Dbxref=Genbank:YP_002402062.1,GeneID:7144482;gbkey=CDS;product=metallothionein SmtA;protein_id=YP_002402062.1;transl_table=11
NC_011748.1	RefSeq	gene	1035743	1037065	.	+	.	ID=gene986;Name=mukF;Dbxref=GeneID:7147670;gbkey=Gene;gene=mukF;locus_tag=EC55989_0968
NC_011748.1	RefSeq	CDS	1035743	1037065	.	+	0	ID=cds919;Name=YP_002402063.1;Parent=gene986;Note=acts with MukB and MukE to condense the chromosome and allow for segregation during cell division;Dbxref=Genbank:YP_002402063.1,GeneID:7147670;gbkey=CDS;product=condesin subunit F;protein_id=YP_002402063.1;transl_table=11
NC_011748.1	RefSeq	STS	1036315	1036476	.	+	.	ID=id80;Dbxref=UniSTS:67481,GeneID:7147670;gbkey=STS
NC_011748.1	RefSeq	gene	1037073	1037750	.	+	.	ID=gene987;Name=mukE;Dbxref=GeneID:7146920;gbkey=Gene;gene=mukE;locus_tag=EC55989_0969
NC_011748.1	RefSeq	CDS	1037073	1037750	.	+	0	ID=cds920;Name=YP_002402064.1;Parent=gene987;Note=acts with MukB and MukF to condense the chromosome and allow for segregation during cell division;Dbxref=Genbank:YP_002402064.1,GeneID:7146920;gbkey=CDS;product=condesin subunit E;protein_id=YP_002402064.1;transl_table=11
NC_011748.1	RefSeq	gene	1037750	1042210	.	+	.	ID=gene988;Name=mukB;Dbxref=GeneID:7146919;gbkey=Gene;gene=mukB;locus_tag=EC55989_0970
NC_011748.1	RefSeq	CDS	1037750	1042210	.	+	0	ID=cds921;Name=YP_002402065.1;Parent=gene988;Note=SMC %28structural maintenance of chromosomes%29 family of proteins%3B involved in chromosome condensatin and partitioning%3B forms a homodimer and the C-terminal is essential for DNA-binding activity while the purified N-terminal domain binds FtsZ%3B mutations result in cell division defects;Dbxref=Genbank:YP_002402065.1,GeneID:7146919;gbkey=CDS;product=cell division protein MukB;protein_id=YP_002402065.1;transl_table=11
NC_011748.1	RefSeq	gene	1042471	1044318	.	+	.	ID=gene989;Name=ycbB;Dbxref=GeneID:7146918;gbkey=Gene;gene=ycbB;locus_tag=EC55989_0971
NC_011748.1	RefSeq	CDS	1042471	1044318	.	+	0	ID=cds922;Name=YP_002402066.1;Parent=gene989;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002402066.1,GeneID:7146918;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402066.1;transl_table=11
NC_011748.1	RefSeq	gene	1044499	1045047	.	+	.	ID=gene990;Name=ycbK;Dbxref=GeneID:7148252;gbkey=Gene;gene=ycbK;locus_tag=EC55989_0972
NC_011748.1	RefSeq	CDS	1044499	1045047	.	+	0	ID=cds923;Name=YP_002402067.1;Parent=gene990;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402067.1,GeneID:7148252;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402067.1;transl_table=11
NC_011748.1	RefSeq	gene	1045074	1045721	.	+	.	ID=gene991;Name=ycbL;Dbxref=GeneID:7148257;gbkey=Gene;gene=ycbL;locus_tag=EC55989_0973
NC_011748.1	RefSeq	CDS	1045074	1045721	.	+	0	ID=cds924;Name=YP_002402068.1;Parent=gene991;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 14529289%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002402068.1,GeneID:7148257;gbkey=CDS;product=metal-binding hydrolase;protein_id=YP_002402068.1;transl_table=11
NC_011748.1	RefSeq	gene	1045963	1046943	.	-	.	ID=gene992;Name=EC55989_0975;Dbxref=GeneID:7148258;gbkey=Gene;locus_tag=EC55989_0975
NC_011748.1	RefSeq	CDS	1045963	1046943	.	-	0	ID=cds925;Name=YP_002402069.1;Parent=gene992;Note=Evidence 2b : Function of strongly homologous gene%3B Product type e : enzyme;Dbxref=Genbank:YP_002402069.1,GeneID:7148258;gbkey=CDS;product=transposase%2C IS110 family;protein_id=YP_002402069.1;transl_table=11
NC_011748.1	RefSeq	gene	1047222	1048412	.	-	.	ID=gene993;Name=aspC;Dbxref=GeneID:7144483;gbkey=Gene;gene=aspC;locus_tag=EC55989_0977
NC_011748.1	RefSeq	CDS	1047222	1048412	.	-	0	ID=cds926;Name=YP_002402070.1;Parent=gene993;Note=catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate;Dbxref=Genbank:YP_002402070.1,GeneID:7144483;gbkey=CDS;product=aromatic amino acid aminotransferase;protein_id=YP_002402070.1;transl_table=11
NC_011748.1	RefSeq	gene	1048597	1049685	.	-	.	ID=gene994;Name=ompF;Dbxref=GeneID:7145572;gbkey=Gene;gene=ompF;locus_tag=EC55989_0978
NC_011748.1	RefSeq	CDS	1048597	1049685	.	-	0	ID=cds927;Name=YP_002402071.1;Parent=gene994;Note=outer membrane porin F%3B 1a%3B Ia%3B b;Dbxref=Genbank:YP_002402071.1,GeneID:7145572;gbkey=CDS;product=outer membrane protein F;protein_id=YP_002402071.1;transl_table=11
NC_011748.1	RefSeq	gene	1050287	1051687	.	-	.	ID=gene995;Name=asnC;Dbxref=GeneID:7147067;gbkey=Gene;gene=asnC;locus_tag=EC55989_0979
NC_011748.1	RefSeq	CDS	1050287	1051687	.	-	0	ID=cds928;Name=YP_002402072.1;Parent=gene995;Note=catalyzes a two-step reaction%2C first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA;Dbxref=Genbank:YP_002402072.1,GeneID:7147067;gbkey=CDS;product=asparaginyl-tRNA synthetase;protein_id=YP_002402072.1;transl_table=11
NC_011748.1	RefSeq	gene	1051856	1053058	.	-	.	ID=gene996;Name=pncB;Dbxref=GeneID:7145570;gbkey=Gene;gene=pncB;locus_tag=EC55989_0980
NC_011748.1	RefSeq	CDS	1051856	1053058	.	-	0	ID=cds929;Name=YP_002402073.1;Parent=gene996;Note=catalyzes the formation of nictonate and 5-phospho-alpha-D-ribose 1-diphosphate from nicotinate D-ribonucleotide and diphosphate;Dbxref=Genbank:YP_002402073.1,GeneID:7145570;gbkey=CDS;product=nicotinate phosphoribosyltransferase;protein_id=YP_002402073.1;transl_table=11
NC_011748.1	RefSeq	gene	1053324	1055936	.	+	.	ID=gene997;Name=pepN;Dbxref=GeneID:7147202;gbkey=Gene;gene=pepN;locus_tag=EC55989_0981
NC_011748.1	RefSeq	CDS	1053324	1055936	.	+	0	ID=cds930;Name=YP_002402074.1;Parent=gene997;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 21101837%2C 86164315%2C 87163509%2C 2436977%2C 3018440%3B Product type e : enzyme;Dbxref=Genbank:YP_002402074.1,GeneID:7147202;gbkey=CDS;product=aminopeptidase;protein_id=YP_002402074.1;transl_table=11
NC_011748.1	RefSeq	gene	1056143	1056910	.	-	.	ID=gene998;Name=ssuB;Dbxref=GeneID:7147134;gbkey=Gene;gene=ssuB;locus_tag=EC55989_0982
NC_011748.1	RefSeq	CDS	1056143	1056910	.	-	0	ID=cds931;Name=YP_002402075.1;Parent=gene998;Note=part of the ABC type transport system SsuABC for aliphatic sulfonates%3B with SsuA being the periplasmic substrate-binding subunit%2C SsuB the ATP-binding subunit and SsuC the permease;Dbxref=Genbank:YP_002402075.1,GeneID:7147134;gbkey=CDS;product=aliphatic sulfonates transport ATP-binding subunit;protein_id=YP_002402075.1;transl_table=11
NC_011748.1	RefSeq	gene	1056907	1057698	.	-	.	ID=gene999;Name=ssuC;Dbxref=GeneID:7147720;gbkey=Gene;gene=ssuC;locus_tag=EC55989_0983
NC_011748.1	RefSeq	CDS	1056907	1057698	.	-	0	ID=cds932;Name=YP_002402076.1;Parent=gene999;Note=part of the ABC type transport system for alkanesulfonate SsuABC%3B SsuB the ATP-binding subunit and SsuC the permease;Dbxref=Genbank:YP_002402076.1,GeneID:7147720;gbkey=CDS;product=alkanesulfonate transporter permease;protein_id=YP_002402076.1;transl_table=11
NC_011748.1	RefSeq	gene	1057709	1058854	.	-	.	ID=gene1000;Name=ssuD;Dbxref=GeneID:7147721;gbkey=Gene;gene=ssuD;locus_tag=EC55989_0984
NC_011748.1	RefSeq	CDS	1057709	1058854	.	-	0	ID=cds933;Name=YP_002402077.1;Parent=gene1000;Note=catalyzes the release of sulfite from alkanesulfonates;Dbxref=Genbank:YP_002402077.1,GeneID:7147721;gbkey=CDS;product=alkanesulfonate monooxygenase;protein_id=YP_002402077.1;transl_table=11
NC_011748.1	RefSeq	gene	1058851	1059810	.	-	.	ID=gene1001;Name=ssuA;Dbxref=GeneID:7147722;gbkey=Gene;gene=ssuA;locus_tag=EC55989_0985
NC_011748.1	RefSeq	CDS	1058851	1059810	.	-	0	ID=cds934;Name=YP_002402078.1;Parent=gene1001;Note=part of the ABC type transport system SsuABC for aliphatic sulfonates%3B with SsuA being the periplasmic subunit SsuB the ATP-binding subunit and SsuC the permease;Dbxref=Genbank:YP_002402078.1,GeneID:7147722;gbkey=CDS;product=alkanesulfonate transporter substrate-binding subunit;protein_id=YP_002402078.1;transl_table=11
NC_011748.1	RefSeq	gene	1059803	1060378	.	-	.	ID=gene1002;Name=ssuE;Dbxref=GeneID:7147719;gbkey=Gene;gene=ssuE;locus_tag=EC55989_0986
NC_011748.1	RefSeq	CDS	1059803	1060378	.	-	0	ID=cds935;Name=YP_002402079.1;Parent=gene1002;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 20245523%2C 99410391%2C 99436146%2C 8774726%3B Product type e : enzyme;Dbxref=Genbank:YP_002402079.1,GeneID:7147719;gbkey=CDS;product=NAD%28P%29H-dependent FMN reductase;protein_id=YP_002402079.1;transl_table=11
NC_011748.1	RefSeq	gene	1060725	1061276	.	+	.	ID=gene1003;Name=ycbQ;Dbxref=GeneID:7147723;gbkey=Gene;gene=ycbQ;locus_tag=EC55989_0987
NC_011748.1	RefSeq	CDS	1060725	1061276	.	+	0	ID=cds936;Name=YP_002402080.1;Parent=gene1003;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 15380559%3B Product type ps :  structure;Dbxref=Genbank:YP_002402080.1,GeneID:7147723;gbkey=CDS;product=fimbrial-like adhesin protein;protein_id=YP_002402080.1;transl_table=11
NC_011748.1	RefSeq	gene	1061359	1062060	.	+	.	ID=gene1004;Name=ycbR;Dbxref=GeneID:7148259;gbkey=Gene;gene=ycbR;locus_tag=EC55989_0988
NC_011748.1	RefSeq	CDS	1061359	1062060	.	+	0	ID=cds937;Name=YP_002402081.1;Parent=gene1004;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pf :  factor;Dbxref=Genbank:YP_002402081.1,GeneID:7148259;gbkey=CDS;product=periplasmic pilin chaperone;protein_id=YP_002402081.1;transl_table=11
NC_011748.1	RefSeq	gene	1062085	1064685	.	+	.	ID=gene1005;Name=ycbS;Dbxref=GeneID:7148260;gbkey=Gene;gene=ycbS;locus_tag=EC55989_0989
NC_011748.1	RefSeq	CDS	1062085	1064685	.	+	0	ID=cds938;Name=YP_002402082.1;Parent=gene1005;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pf :  factor;Dbxref=Genbank:YP_002402082.1,GeneID:7148260;gbkey=CDS;product=outer membrane export usher protein;protein_id=YP_002402082.1;transl_table=11
NC_011748.1	RefSeq	gene	1064676	1065746	.	+	.	ID=gene1006;Name=ycbT;Dbxref=GeneID:7148261;gbkey=Gene;gene=ycbT;locus_tag=EC55989_0990
NC_011748.1	RefSeq	CDS	1064676	1065746	.	+	0	ID=cds939;Name=YP_002402083.1;Parent=gene1006;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 7721701%3B Product type ps :  structure;Dbxref=Genbank:YP_002402083.1,GeneID:7148261;gbkey=CDS;product=fimbrial-like adhesin protein;protein_id=YP_002402083.1;transl_table=11
NC_011748.1	RefSeq	gene	1065758	1066300	.	+	.	ID=gene1007;Name=ycbU;Dbxref=GeneID:7148262;gbkey=Gene;gene=ycbU;locus_tag=EC55989_0991
NC_011748.1	RefSeq	CDS	1065758	1066300	.	+	0	ID=cds940;Name=YP_002402084.1;Parent=gene1007;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type ps :  structure;Dbxref=Genbank:YP_002402084.1,GeneID:7148262;gbkey=CDS;product=fimbrial-like adhesin protein;protein_id=YP_002402084.1;transl_table=11
NC_011748.1	RefSeq	gene	1066308	1066823	.	+	.	ID=gene1008;Name=ycbV;Dbxref=GeneID:7148263;gbkey=Gene;gene=ycbV;locus_tag=EC55989_0992
NC_011748.1	RefSeq	CDS	1066308	1066823	.	+	0	ID=cds941;Name=YP_002402085.1;Parent=gene1008;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type ps :  structure;Dbxref=Genbank:YP_002402085.1,GeneID:7148263;gbkey=CDS;product=fimbrial-like adhesin protein;protein_id=YP_002402085.1;transl_table=11
NC_011748.1	RefSeq	gene	1066816	1067526	.	+	.	ID=gene1009;Name=ycbF;Dbxref=GeneID:7148264;gbkey=Gene;gene=ycbF;locus_tag=EC55989_0993
NC_011748.1	RefSeq	CDS	1066816	1067526	.	+	0	ID=cds942;Name=YP_002402086.1;Parent=gene1009;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pf :  factor;Dbxref=Genbank:YP_002402086.1,GeneID:7148264;gbkey=CDS;product=pili assembly chaperone;protein_id=YP_002402086.1;transl_table=11
NC_011748.1	RefSeq	gene	1067637	1068647	.	+	.	ID=gene1010;Name=pyrD;Dbxref=GeneID:7148254;gbkey=Gene;gene=pyrD;locus_tag=EC55989_0994
NC_011748.1	RefSeq	CDS	1067637	1068647	.	+	0	ID=cds943;Name=YP_002402087.1;Parent=gene1010;Note=catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway%3B uses a flavin nucleotide as an essential cofactor%3B class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus%2C which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors;Dbxref=Genbank:YP_002402087.1,GeneID:7148254;gbkey=CDS;product=dihydroorotate dehydrogenase 2;protein_id=YP_002402087.1;transl_table=11
NC_011748.1	RefSeq	gene	1068821	1069363	.	+	.	ID=gene1011;Name=ycbW;Dbxref=GeneID:7147319;gbkey=Gene;gene=ycbW;locus_tag=EC55989_0995
NC_011748.1	RefSeq	CDS	1068821	1069363	.	+	0	ID=cds944;Name=YP_002402088.1;Parent=gene1011;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402088.1,GeneID:7147319;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402088.1;transl_table=11
NC_011748.1	RefSeq	gene	1069360	1070469	.	-	.	ID=gene1012;Name=ycbX;Dbxref=GeneID:7148265;gbkey=Gene;gene=ycbX;locus_tag=EC55989_0996
NC_011748.1	RefSeq	CDS	1069360	1070469	.	-	0	ID=cds945;Name=YP_002402089.1;Parent=gene1012;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 1327782%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002402089.1,GeneID:7148265;gbkey=CDS;product=2Fe-2S cluster-containing protein;protein_id=YP_002402089.1;transl_table=11
NC_011748.1	RefSeq	gene	1070713	1072821	.	+	.	ID=gene1013;Name=rlmL;Dbxref=GeneID:7148266;gbkey=Gene;gene=rlmL;locus_tag=EC55989_0997
NC_011748.1	RefSeq	CDS	1070713	1072821	.	+	0	ID=cds946;Name=YP_002402090.1;Parent=gene1013;Note=catalyzes the N2-methyl guanosine modification of the G2445 residue of 23S rRNA;Dbxref=Genbank:YP_002402090.1,GeneID:7148266;gbkey=CDS;product=23S rRNA m%282%29G2445 methyltransferase;protein_id=YP_002402090.1;transl_table=11
NC_011748.1	RefSeq	gene	1072832	1074739	.	+	.	ID=gene1014;Name=uup;Dbxref=GeneID:7148267;gbkey=Gene;gene=uup;locus_tag=EC55989_0998
NC_011748.1	RefSeq	CDS	1072832	1074739	.	+	0	ID=cds947;Name=YP_002402091.1;Parent=gene1014;Note=Uup%3B in Escherichia coli this cytoplasmic protein was shown to contain ATPase activity%3B mutations in this gene affect RecA-independent excision of transposons and affects Mu bacteriophage growth;Dbxref=Genbank:YP_002402091.1,GeneID:7148267;gbkey=CDS;product=ABC transporter ATPase;protein_id=YP_002402091.1;transl_table=11
NC_011748.1	RefSeq	gene	1074869	1076122	.	+	.	ID=gene1015;Name=pqiA;Dbxref=GeneID:7147932;gbkey=Gene;gene=pqiA;locus_tag=EC55989_0999
NC_011748.1	RefSeq	CDS	1074869	1076122	.	+	0	ID=cds948;Name=YP_002402092.1;Parent=gene1015;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 95270582%3B Product type cp : cell process;Dbxref=Genbank:YP_002402092.1,GeneID:7147932;gbkey=CDS;product=paraquat-inducible membrane protein A;protein_id=YP_002402092.1;transl_table=11
NC_011748.1	RefSeq	gene	1076127	1077767	.	+	.	ID=gene1016;Name=pqiB;Dbxref=GeneID:7147236;gbkey=Gene;gene=pqiB;locus_tag=EC55989_1000
NC_011748.1	RefSeq	CDS	1076127	1077767	.	+	0	ID=cds949;Name=YP_002402093.1;Parent=gene1016;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 95270582%3B Product type cp : cell process;Dbxref=Genbank:YP_002402093.1,GeneID:7147236;gbkey=CDS;product=paraquat-inducible protein B;protein_id=YP_002402093.1;transl_table=11
NC_011748.1	RefSeq	gene	1077779	1078327	.	+	.	ID=gene1017;Name=ymbA;Dbxref=GeneID:7147237;gbkey=Gene;gene=ymbA;locus_tag=EC55989_1001
NC_011748.1	RefSeq	CDS	1077779	1078327	.	+	0	ID=cds950;Name=YP_002402094.1;Parent=gene1017;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402094.1,GeneID:7147237;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402094.1;transl_table=11
NC_011748.1	RefSeq	gene	1078583	1078750	.	+	.	ID=gene1018;Name=rmf;Dbxref=GeneID:7149263;gbkey=Gene;gene=rmf;locus_tag=EC55989_1002
NC_011748.1	RefSeq	CDS	1078583	1078750	.	+	0	ID=cds951;Name=YP_002402095.1;Parent=gene1018;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 1101029%2C 90207255%2C 2832401%2C 8440252%3B Product type f : factor;Dbxref=Genbank:YP_002402095.1,GeneID:7149263;gbkey=CDS;product=ribosome modulation factor;protein_id=YP_002402095.1;transl_table=11
NC_011748.1	RefSeq	gene	1078820	1079338	.	-	.	ID=gene1019;Name=fabA;Dbxref=GeneID:7147430;gbkey=Gene;gene=fabA;locus_tag=EC55989_1003
NC_011748.1	RefSeq	CDS	1078820	1079338	.	-	0	ID=cds952;Name=YP_002402096.1;Parent=gene1019;Note=catalyzes the dehydration of %283R%29-3-hydroxydecanoyl-ACP to 2%2C3-decenoyl-ACP or 3%2C4-decenoyl-ACP;Dbxref=Genbank:YP_002402096.1,GeneID:7147430;gbkey=CDS;product=3-hydroxydecanoyl-ACP dehydratase;protein_id=YP_002402096.1;transl_table=11
NC_011748.1	RefSeq	gene	1079407	1081167	.	-	.	ID=gene1020;Name=ycbZ;Dbxref=GeneID:7146046;gbkey=Gene;gene=ycbZ;locus_tag=EC55989_1004
NC_011748.1	RefSeq	CDS	1079407	1081167	.	-	0	ID=cds953;Name=YP_002402097.1;Parent=gene1020;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002402097.1,GeneID:7146046;gbkey=CDS;product=ATP-dependent protease;protein_id=YP_002402097.1;transl_table=11
NC_011748.1	RefSeq	gene	1081353	1081805	.	+	.	ID=gene1021;Name=ycbG;Dbxref=GeneID:7148268;gbkey=Gene;gene=ycbG;locus_tag=EC55989_1005
NC_011748.1	RefSeq	CDS	1081353	1081805	.	+	0	ID=cds954;Name=YP_002402098.1;Parent=gene1021;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402098.1,GeneID:7148268;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402098.1;transl_table=11
NC_011748.1	RefSeq	gene	1081881	1082921	.	-	.	ID=gene1022;Name=ompA;Dbxref=GeneID:7148255;gbkey=Gene;gene=ompA;locus_tag=EC55989_1006
NC_011748.1	RefSeq	CDS	1081881	1082921	.	-	0	ID=cds955;Name=YP_002402099.1;Parent=gene1022;Note=OmpA is believed to be a porin%2C involved in diffusion of nonspecific small solutes across the outer membrane. It is the most abundant integral protein of the outer membrane of E. coli%2C and it is known to play a role as a phage receptor%2C a mediator of F-factor dependent conjugation%2C and in maintaining the structural shape of the outer membrane%3B 3a%3B II%2A%3B G%3B d;Dbxref=Genbank:YP_002402099.1,GeneID:7148255;gbkey=CDS;product=outer membrane protein A;protein_id=YP_002402099.1;transl_table=11
NC_011748.1	RefSeq	gene	1083169	1083535	.	+	.	ID=gene1023;Name=isf;Dbxref=GeneID:7147065;gbkey=Gene;gene=isf;locus_tag=EC55989_misc_RNA_20
NC_011748.1	RefSeq	transcript	1083169	1083535	.	+	.	ID=rna44;Parent=gene1023;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 2473377%3B Product type n : RNA;Dbxref=GeneID:7147065;gbkey=misc_RNA;product=isf
NC_011748.1	RefSeq	exon	1083169	1083535	.	+	.	ID=id81;Parent=rna44;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 2473377%3B Product type n : RNA;Dbxref=GeneID:7147065;gbkey=misc_RNA;product=isf
NC_011748.1	RefSeq	gene	1083278	1083787	.	-	.	ID=gene1024;Name=sulA;Dbxref=GeneID:7146624;gbkey=Gene;gene=sulA;locus_tag=EC55989_1007
NC_011748.1	RefSeq	CDS	1083278	1083787	.	-	0	ID=cds956;Name=YP_002402100.1;Parent=gene1024;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 10368140%2C 91072263%2C 93163041%2C 98348458%2C 3297925%2C 6253901%2C 6306396%3B Product type cp : cell process;Dbxref=Genbank:YP_002402100.1,GeneID:7146624;gbkey=CDS;product=SOS cell division inhibitor;protein_id=YP_002402100.1;transl_table=11
NC_011748.1	RefSeq	gene	1084006	1084635	.	+	.	ID=gene1025;Name=yccR;Dbxref=GeneID:7147739;gbkey=Gene;gene=yccR;locus_tag=EC55989_1008
NC_011748.1	RefSeq	CDS	1084006	1084635	.	+	0	ID=cds957;Name=YP_002402101.1;Parent=gene1025;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402101.1,GeneID:7147739;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402101.1;transl_table=11
NC_011748.1	RefSeq	gene	1084598	1086751	.	-	.	ID=gene1026;Name=yccS;Dbxref=GeneID:7148275;gbkey=Gene;gene=yccS;locus_tag=EC55989_1009
NC_011748.1	RefSeq	CDS	1084598	1086751	.	-	0	ID=cds958;Name=YP_002402102.1;Parent=gene1026;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002402102.1,GeneID:7148275;gbkey=CDS;product=inner membrane protein;protein_id=YP_002402102.1;transl_table=11
NC_011748.1	RefSeq	gene	1086770	1087216	.	-	.	ID=gene1027;Name=yccF;Dbxref=GeneID:7148276;gbkey=Gene;gene=yccF;locus_tag=EC55989_1010
NC_011748.1	RefSeq	CDS	1086770	1087216	.	-	0	ID=cds959;Name=YP_002402103.1;Parent=gene1027;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002402103.1,GeneID:7148276;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402103.1;transl_table=11
NC_011748.1	RefSeq	gene	1087339	1089393	.	+	.	ID=gene1028;Name=helD;Dbxref=GeneID:7148272;gbkey=Gene;gene=helD;locus_tag=EC55989_1011
NC_011748.1	RefSeq	CDS	1087339	1089393	.	+	0	ID=cds960;Name=YP_002402104.1;Parent=gene1028;Note=catalyzes the ATP-dependent unwinding of duplex DNA in the 3%27 to 5%27 direction with respect to the bound single strand;Dbxref=Genbank:YP_002402104.1,GeneID:7148272;gbkey=CDS;product=DNA helicase IV;protein_id=YP_002402104.1;transl_table=11
NC_011748.1	RefSeq	gene	1089425	1089883	.	-	.	ID=gene1029;Name=mgsA;Dbxref=GeneID:7146406;gbkey=Gene;gene=mgsA;locus_tag=EC55989_1012
NC_011748.1	RefSeq	CDS	1089425	1089883	.	-	0	ID=cds961;Name=YP_002402105.1;Parent=gene1029;Note=catalyzes the formation of methylglyoxal from glycerone phosphate;Dbxref=Genbank:YP_002402105.1,GeneID:7146406;gbkey=CDS;product=methylglyoxal synthase;protein_id=YP_002402105.1;transl_table=11
NC_011748.1	RefSeq	gene	1089979	1090641	.	-	.	ID=gene1030;Name=yccT;Dbxref=GeneID:7146842;gbkey=Gene;gene=yccT;locus_tag=EC55989_1013
NC_011748.1	RefSeq	CDS	1089979	1090641	.	-	0	ID=cds962;Name=YP_002402106.1;Parent=gene1030;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402106.1,GeneID:7146842;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402106.1;transl_table=11
NC_011748.1	RefSeq	gene	1090814	1091227	.	+	.	ID=gene1031;Name=yccU;Dbxref=GeneID:7148277;gbkey=Gene;gene=yccU;locus_tag=EC55989_1014
NC_011748.1	RefSeq	CDS	1090814	1091227	.	+	0	ID=cds963;Name=YP_002402107.1;Parent=gene1031;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002402107.1,GeneID:7148277;gbkey=CDS;product=CoA-binding protein;protein_id=YP_002402107.1;transl_table=11
NC_011748.1	RefSeq	gene	1091272	1091589	.	-	.	ID=gene1032;Name=yccV;Dbxref=GeneID:7148278;gbkey=Gene;gene=yccV;locus_tag=EC55989_1015
NC_011748.1	RefSeq	CDS	1091272	1091589	.	-	0	ID=cds964;Name=YP_002402108.1;Parent=gene1032;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 12700277%2C 15569148%3B Product type f : factor;Dbxref=Genbank:YP_002402108.1,GeneID:7148278;gbkey=CDS;product=heat shock protein HspQ;protein_id=YP_002402108.1;transl_table=11
NC_011748.1	RefSeq	gene	1091647	1092750	.	-	.	ID=gene1033;Name=yccW;Dbxref=GeneID:7148279;gbkey=Gene;gene=yccW;locus_tag=EC55989_1016
NC_011748.1	RefSeq	CDS	1091647	1092750	.	-	0	ID=cds965;Name=YP_002402109.1;Parent=gene1033;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002402109.1,GeneID:7148279;gbkey=CDS;product=AdoMet-dependent methyltransferase%2C UPF0064 family;protein_id=YP_002402109.1;transl_table=11
NC_011748.1	RefSeq	gene	1092719	1093210	.	+	.	ID=gene1034;Name=yccX;Dbxref=GeneID:7148280;gbkey=Gene;gene=yccX;locus_tag=EC55989_1017
NC_011748.1	RefSeq	CDS	1092719	1093210	.	+	0	ID=cds966;Name=YP_002402110.1;Parent=gene1034;Note=catalyzes the hydrolysis of acylphosphate;Dbxref=Genbank:YP_002402110.1,GeneID:7148280;gbkey=CDS;product=acylphosphatase;protein_id=YP_002402110.1;transl_table=11
NC_011748.1	RefSeq	gene	1093207	1093536	.	-	.	ID=gene1035;Name=tusE;Dbxref=GeneID:7148281;gbkey=Gene;gene=tusE;locus_tag=EC55989_1018
NC_011748.1	RefSeq	CDS	1093207	1093536	.	-	0	ID=cds967;Name=YP_002402111.1;Parent=gene1035;Note=transfers sulfur from TusBCD complex to MnmA%3B involved in thiouridation of U34 position of some tRNAs;Dbxref=Genbank:YP_002402111.1,GeneID:7148281;gbkey=CDS;product=sulfur transfer protein TusE;protein_id=YP_002402111.1;transl_table=11
NC_011748.1	RefSeq	gene	1093627	1094286	.	-	.	ID=gene1036;Name=yccA;Dbxref=GeneID:7147879;gbkey=Gene;gene=yccA;locus_tag=EC55989_1019
NC_011748.1	RefSeq	CDS	1093627	1094286	.	-	0	ID=cds968;Name=YP_002402112.1;Parent=gene1036;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 6376117%3B Product type m : membrane component;Dbxref=Genbank:YP_002402112.1,GeneID:7147879;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402112.1;transl_table=11
NC_011748.1	RefSeq	gene	1094492	1094704	.	+	.	ID=gene1037;Name=EC55989_1020;Dbxref=GeneID:7148269;gbkey=Gene;locus_tag=EC55989_1020
NC_011748.1	RefSeq	CDS	1094492	1094704	.	+	0	ID=cds969;Name=YP_002402113.1;Parent=gene1037;Note=Evidence 6 : Doubtful CDS;Dbxref=Genbank:YP_002402113.1,GeneID:7148269;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402113.1;transl_table=11
NC_011748.1	RefSeq	gene	1094694	1095713	.	-	.	ID=gene1038;Name=EC55989_1021;Dbxref=GeneID:7144484;gbkey=Gene;locus_tag=EC55989_1021
NC_011748.1	RefSeq	CDS	1094694	1095713	.	-	0	ID=cds970;Name=YP_002402114.1;Parent=gene1038;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402114.1,GeneID:7144484;gbkey=CDS;product=integrase from prophage;protein_id=YP_002402114.1;transl_table=11
NC_011748.1	RefSeq	gene	1095691	1096071	.	-	.	ID=gene1039;Name=EC55989_1022;Dbxref=GeneID:7144485;gbkey=Gene;locus_tag=EC55989_1022
NC_011748.1	RefSeq	CDS	1095691	1096071	.	-	0	ID=cds971;Name=YP_002402115.1;Parent=gene1039;Note=Evidence 5 : No homology to any previously reported sequences%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402115.1,GeneID:7144485;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402115.1;transl_table=11
NC_011748.1	RefSeq	gene	1096001	1098493	.	-	.	ID=gene1040;Name=EC55989_1023;Dbxref=GeneID:7144486;gbkey=Gene;locus_tag=EC55989_1023
NC_011748.1	RefSeq	CDS	1096001	1098493	.	-	0	ID=cds972;Name=YP_002402116.1;Parent=gene1040;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402116.1,GeneID:7144486;gbkey=CDS;product=exonuclease from phage origin;protein_id=YP_002402116.1;transl_table=11
NC_011748.1	RefSeq	gene	1098589	1098777	.	-	.	ID=gene1041;Name=EC55989_1024;Dbxref=GeneID:7144487;gbkey=Gene;locus_tag=EC55989_1024
NC_011748.1	RefSeq	CDS	1098589	1098777	.	-	0	ID=cds973;Name=YP_002402117.1;Parent=gene1041;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402117.1,GeneID:7144487;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402117.1;transl_table=11
NC_011748.1	RefSeq	gene	1098774	1099067	.	-	.	ID=gene1042;Name=EC55989_1025;Dbxref=GeneID:7144488;gbkey=Gene;locus_tag=EC55989_1025
NC_011748.1	RefSeq	CDS	1098774	1099067	.	-	0	ID=cds974;Name=YP_002402118.1;Parent=gene1042;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402118.1,GeneID:7144488;gbkey=CDS;product=regulator of cell division encoded by prophage;protein_id=YP_002402118.1;transl_table=11
NC_011748.1	RefSeq	gene	1099137	1099189	.	-	.	ID=gene1043;Name=dicF;Dbxref=GeneID:7144489;gbkey=Gene;gene=dicF;locus_tag=EC55989_misc_RNA_21
NC_011748.1	RefSeq	transcript	1099137	1099189	.	-	.	ID=rna45;Parent=gene1043;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 7651342%3B Product type n : RNA;Dbxref=GeneID:7144489;gbkey=misc_RNA;product=DicF
NC_011748.1	RefSeq	exon	1099137	1099189	.	-	.	ID=id82;Parent=rna45;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 7651342%3B Product type n : RNA;Dbxref=GeneID:7144489;gbkey=misc_RNA;product=DicF
NC_011748.1	RefSeq	gene	1099530	1099748	.	-	.	ID=gene1044;Name=ydfC;Dbxref=GeneID:7145911;gbkey=Gene;gene=ydfC;locus_tag=EC55989_1026
NC_011748.1	RefSeq	CDS	1099530	1099748	.	-	0	ID=cds975;Name=YP_002402119.1;Parent=gene1044;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402119.1,GeneID:7145911;gbkey=CDS;product=Qin prophage;protein_id=YP_002402119.1;transl_table=11
NC_011748.1	RefSeq	gene	1099778	1099906	.	-	.	ID=gene1045;Name=ydfB;Dbxref=GeneID:7148431;gbkey=Gene;gene=ydfB;locus_tag=EC55989_1027
NC_011748.1	RefSeq	CDS	1099778	1099906	.	-	0	ID=cds976;Name=YP_002402120.1;Parent=gene1045;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402120.1,GeneID:7148431;gbkey=CDS;product=Qin prophage;protein_id=YP_002402120.1;transl_table=11
NC_011748.1	RefSeq	gene	1099908	1100063	.	-	.	ID=gene1046;Name=ydfA;Dbxref=GeneID:7148430;gbkey=Gene;gene=ydfA;locus_tag=EC55989_1028
NC_011748.1	RefSeq	CDS	1099908	1100063	.	-	0	ID=cds977;Name=YP_002402121.1;Parent=gene1046;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402121.1,GeneID:7148430;gbkey=CDS;product=Qin prophage;protein_id=YP_002402121.1;transl_table=11
NC_011748.1	RefSeq	gene	1100271	1100678	.	-	.	ID=gene1047;Name=dicA;Dbxref=GeneID:7148428;gbkey=Gene;gene=dicA;locus_tag=EC55989_1029
NC_011748.1	RefSeq	CDS	1100271	1100678	.	-	0	ID=cds978;Name=YP_002402122.1;Parent=gene1047;Note=The transcriptional repressor of DicA %28divison cell%29 has a hypothetical DNA binding domain. It represses the transcription of dicB and dicC%2C but its specific role in cellular replication and mode of action are still unknown.;Dbxref=Genbank:YP_002402122.1,GeneID:7148428;gbkey=CDS;product=transcriptional repressor DicA;protein_id=YP_002402122.1;transl_table=11
NC_011748.1	RefSeq	gene	1100755	1100982	.	+	.	ID=gene1048;Name=dicC;Dbxref=GeneID:7145906;gbkey=Gene;gene=dicC;locus_tag=EC55989_1030
NC_011748.1	RefSeq	CDS	1100755	1100982	.	+	0	ID=cds979;Name=YP_002402123.1;Parent=gene1048;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 88232418%2C 3532030%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402123.1,GeneID:7145906;gbkey=CDS;product=DNA-binding transcriptional regulator DicC;protein_id=YP_002402123.1;transl_table=11
NC_011748.1	RefSeq	gene	1100966	1101517	.	+	.	ID=gene1049;Name=EC55989_1031;Dbxref=GeneID:7145909;gbkey=Gene;locus_tag=EC55989_1031
NC_011748.1	RefSeq	CDS	1100966	1101517	.	+	0	ID=cds980;Name=YP_002402124.1;Parent=gene1049;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402124.1,GeneID:7145909;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402124.1;transl_table=11
NC_011748.1	RefSeq	gene	1101414	1102529	.	+	.	ID=gene1050;Name=EC55989_1032;Dbxref=GeneID:7144490;gbkey=Gene;locus_tag=EC55989_1032
NC_011748.1	RefSeq	CDS	1101414	1102529	.	+	0	ID=cds981;Name=YP_002402125.1;Parent=gene1050;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402125.1,GeneID:7144490;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402125.1;transl_table=11
NC_011748.1	RefSeq	gene	1102318	1102983	.	+	.	ID=gene1051;Name=EC55989_1033;Dbxref=GeneID:7144491;gbkey=Gene;locus_tag=EC55989_1033
NC_011748.1	RefSeq	CDS	1102318	1102983	.	+	0	ID=cds982;Name=YP_002402126.1;Parent=gene1051;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402126.1,GeneID:7144491;gbkey=CDS;product=replication protein in prophage;protein_id=YP_002402126.1;transl_table=11
NC_011748.1	RefSeq	gene	1102999	1103787	.	+	.	ID=gene1052;Name=EC55989_1034;Dbxref=GeneID:7144492;gbkey=Gene;locus_tag=EC55989_1034
NC_011748.1	RefSeq	CDS	1102999	1103787	.	+	0	ID=cds983;Name=YP_002402127.1;Parent=gene1052;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402127.1,GeneID:7144492;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402127.1;transl_table=11
NC_011748.1	RefSeq	gene	1103788	1104225	.	+	.	ID=gene1053;Name=EC55989_1035;Dbxref=GeneID:7144493;gbkey=Gene;locus_tag=EC55989_1035
NC_011748.1	RefSeq	CDS	1103788	1104225	.	+	0	ID=cds984;Name=YP_002402128.1;Parent=gene1053;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402128.1,GeneID:7144493;gbkey=CDS;product=phage protein;protein_id=YP_002402128.1;transl_table=11
NC_011748.1	RefSeq	gene	1104222	1104710	.	+	.	ID=gene1054;Name=EC55989_1036;Dbxref=GeneID:7144494;gbkey=Gene;locus_tag=EC55989_1036
NC_011748.1	RefSeq	CDS	1104222	1104710	.	+	0	ID=cds985;Name=YP_002402129.1;Parent=gene1054;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402129.1,GeneID:7144494;gbkey=CDS;product=methyltransferase;protein_id=YP_002402129.1;transl_table=11
NC_011748.1	RefSeq	gene	1104703	1104957	.	+	.	ID=gene1055;Name=EC55989_1037;Dbxref=GeneID:7144495;gbkey=Gene;locus_tag=EC55989_1037
NC_011748.1	RefSeq	CDS	1104703	1104957	.	+	0	ID=cds986;Name=YP_002402130.1;Parent=gene1055;Note=Evidence 5 : No homology to any previously reported sequences%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402130.1,GeneID:7144495;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402130.1;transl_table=11
NC_011748.1	RefSeq	gene	1104950	1105261	.	+	.	ID=gene1056;Name=EC55989_1038;Dbxref=GeneID:7144496;gbkey=Gene;locus_tag=EC55989_1038
NC_011748.1	RefSeq	CDS	1104950	1105261	.	+	0	ID=cds987;Name=YP_002402131.1;Parent=gene1056;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402131.1,GeneID:7144496;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402131.1;transl_table=11
NC_011748.1	RefSeq	gene	1105390	1105572	.	+	.	ID=gene1057;Name=EC55989_1039;Dbxref=GeneID:7144497;gbkey=Gene;locus_tag=EC55989_1039
NC_011748.1	RefSeq	CDS	1105390	1105572	.	+	0	ID=cds988;Name=YP_002402132.1;Parent=gene1057;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402132.1,GeneID:7144497;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402132.1;transl_table=11
NC_011748.1	RefSeq	gene	1105565	1105741	.	+	.	ID=gene1058;Name=EC55989_1040;Dbxref=GeneID:7144498;gbkey=Gene;locus_tag=EC55989_1040
NC_011748.1	RefSeq	CDS	1105565	1105741	.	+	0	ID=cds989;Name=YP_002402133.1;Parent=gene1058;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402133.1,GeneID:7144498;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402133.1;transl_table=11
NC_011748.1	RefSeq	gene	1105738	1106253	.	+	.	ID=gene1059;Name=EC55989_1041;Dbxref=GeneID:7144499;gbkey=Gene;locus_tag=EC55989_1041
NC_011748.1	RefSeq	CDS	1105738	1106253	.	+	0	ID=cds990;Name=YP_002402134.1;Parent=gene1059;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402134.1,GeneID:7144499;gbkey=CDS;product=prophage protein;protein_id=YP_002402134.1;transl_table=11
NC_011748.1	RefSeq	gene	1106485	1106988	.	-	.	ID=gene1060;Name=insB;Dbxref=GeneID:7144500;gbkey=Gene;gene=insB;locus_tag=EC55989_1042
NC_011748.1	RefSeq	CDS	1106485	1106988	.	-	0	ID=cds991;Name=YP_002402135.1;Parent=gene1060;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 9689094%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402135.1,GeneID:7144500;gbkey=CDS;product=IS1 transposase InsAB%27;protein_id=YP_002402135.1;transl_table=11
NC_011748.1	RefSeq	gene	1106907	1107182	.	-	.	ID=gene1061;Name=insA;Dbxref=GeneID:7146583;gbkey=Gene;gene=insA;locus_tag=EC55989_1043
NC_011748.1	RefSeq	CDS	1106907	1107182	.	-	0	ID=cds992;Name=YP_002402136.1;Parent=gene1061;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 9689094%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402136.1,GeneID:7146583;gbkey=CDS;product=IS1 repressor protein InsA;protein_id=YP_002402136.1;transl_table=11
NC_011748.1	RefSeq	gene	1107961	1108212	.	+	.	ID=gene1062;Name=rem;Dbxref=GeneID:7146571;gbkey=Gene;gene=rem;locus_tag=EC55989_1044
NC_011748.1	RefSeq	CDS	1107961	1108212	.	+	0	ID=cds993;Name=YP_002402137.1;Parent=gene1062;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 2990907%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402137.1,GeneID:7146571;gbkey=CDS;product=Qin prophage;protein_id=YP_002402137.1;transl_table=11
NC_011748.1	RefSeq	gene	1108559	1109614	.	+	.	ID=gene1063;Name=ydfU;Dbxref=GeneID:7147370;gbkey=Gene;gene=ydfU;locus_tag=EC55989_1045
NC_011748.1	RefSeq	CDS	1108559	1109614	.	+	0	ID=cds994;Name=YP_002402138.1;Parent=gene1063;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402138.1,GeneID:7147370;gbkey=CDS;product=phage protein;protein_id=YP_002402138.1;transl_table=11
NC_011748.1	RefSeq	gene	1109615	1109995	.	+	.	ID=gene1064;Name=EC55989_1046;Dbxref=GeneID:7148442;gbkey=Gene;locus_tag=EC55989_1046
NC_011748.1	RefSeq	CDS	1109615	1109995	.	+	0	ID=cds995;Name=YP_002402139.1;Parent=gene1064;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402139.1,GeneID:7148442;gbkey=CDS;product=Holliday juction resolvase;protein_id=YP_002402139.1;transl_table=11
NC_011748.1	RefSeq	gene	1109992	1110813	.	+	.	ID=gene1065;Name=EC55989_1047;Dbxref=GeneID:7144501;gbkey=Gene;locus_tag=EC55989_1047
NC_011748.1	RefSeq	CDS	1109992	1110813	.	+	0	ID=cds996;Name=YP_002402140.1;Parent=gene1065;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402140.1,GeneID:7144501;gbkey=CDS;product=antitermination protein Q of prophage;protein_id=YP_002402140.1;transl_table=11
NC_011748.1	RefSeq	gene	1110953	1111237	.	+	.	ID=gene1066;Name=EC55989_1048;Dbxref=GeneID:7144502;gbkey=Gene;locus_tag=EC55989_1048
NC_011748.1	RefSeq	CDS	1110953	1111237	.	+	0	ID=cds997;Name=YP_002402141.1;Parent=gene1066;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402141.1,GeneID:7144502;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402141.1;transl_table=11
NC_011748.1	RefSeq	gene	1111388	1112437	.	+	.	ID=gene1067;Name=EC55989_1049;Dbxref=GeneID:7144503;gbkey=Gene;locus_tag=EC55989_1049
NC_011748.1	RefSeq	CDS	1111388	1112437	.	+	0	ID=cds998;Name=YP_002402142.1;Parent=gene1067;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402142.1,GeneID:7144503;gbkey=CDS;product=DNA adenine methyltransferase %28 DNA methylase%29 from phage origin;protein_id=YP_002402142.1;transl_table=11
NC_011748.1	RefSeq	gene	1112487	1112562	.	+	.	ID=gene1068;Name=EC55989_tRNA15;Dbxref=GeneID:7144504;gbkey=Gene;locus_tag=EC55989_tRNA15
NC_011748.1	RefSeq	tRNA	1112487	1112562	.	+	.	ID=rna46;Dbxref=GeneID:7144504;gbkey=tRNA;product=tRNA-Met
NC_011748.1	RefSeq	exon	1112487	1112562	.	+	.	ID=id83;Parent=rna46;Dbxref=GeneID:7144504;gbkey=tRNA;product=tRNA-Met
NC_011748.1	RefSeq	gene	1112570	1112646	.	+	.	ID=gene1069;Name=EC55989_tRNA16;Dbxref=GeneID:7145323;gbkey=Gene;locus_tag=EC55989_tRNA16
NC_011748.1	RefSeq	tRNA	1112570	1112646	.	+	.	ID=rna47;Dbxref=GeneID:7145323;gbkey=tRNA;product=tRNA-Arg
NC_011748.1	RefSeq	exon	1112570	1112646	.	+	.	ID=id84;Parent=rna47;Dbxref=GeneID:7145323;gbkey=tRNA;product=tRNA-Arg
NC_011748.1	RefSeq	gene	1112660	1112736	.	+	.	ID=gene1070;Name=EC55989_tRNA17;Dbxref=GeneID:7145324;gbkey=Gene;locus_tag=EC55989_tRNA17
NC_011748.1	RefSeq	tRNA	1112660	1112736	.	+	.	ID=rna48;Dbxref=GeneID:7145324;gbkey=tRNA;product=tRNA-Arg
NC_011748.1	RefSeq	exon	1112660	1112736	.	+	.	ID=id85;Parent=rna48;Dbxref=GeneID:7145324;gbkey=tRNA;product=tRNA-Arg
NC_011748.1	RefSeq	gene	1113226	1115088	.	+	.	ID=gene1071;Name=EC55989_1050;Dbxref=GeneID:7145325;gbkey=Gene;locus_tag=EC55989_1050
NC_011748.1	RefSeq	CDS	1113226	1115088	.	+	0	ID=cds999;Name=YP_002402143.1;Parent=gene1071;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402143.1,GeneID:7145325;gbkey=CDS;product=phage protein;protein_id=YP_002402143.1;transl_table=11
NC_011748.1	RefSeq	gene	1115133	1115453	.	+	.	ID=gene1072;Name=EC55989_1051;Dbxref=GeneID:7144505;gbkey=Gene;locus_tag=EC55989_1051
NC_011748.1	RefSeq	CDS	1115133	1115453	.	+	0	ID=cds1000;Name=YP_002402144.1;Parent=gene1072;Note=Evidence 2b : Function of strongly homologous gene%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402144.1,GeneID:7144505;gbkey=CDS;product=Lysis protein S homolog from lambdoid prophage;protein_id=YP_002402144.1;transl_table=11
NC_011748.1	RefSeq	gene	1115458	1116264	.	+	.	ID=gene1073;Name=EC55989_1052;Dbxref=GeneID:7144506;gbkey=Gene;locus_tag=EC55989_1052
NC_011748.1	RefSeq	CDS	1115458	1116264	.	+	0	ID=cds1001;Name=YP_002402145.1;Parent=gene1073;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402145.1,GeneID:7144506;gbkey=CDS;product=phage protein;protein_id=YP_002402145.1;transl_table=11
NC_011748.1	RefSeq	gene	1116274	1116588	.	-	.	ID=gene1074;Name=EC55989_1053;Dbxref=GeneID:7144507;gbkey=Gene;locus_tag=EC55989_1053
NC_011748.1	RefSeq	CDS	1116274	1116588	.	-	0	ID=cds1002;Name=YP_002402146.1;Parent=gene1074;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402146.1,GeneID:7144507;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402146.1;transl_table=11
NC_011748.1	RefSeq	gene	1116717	1117250	.	+	.	ID=gene1075;Name=ydfQ;Dbxref=GeneID:7144508;gbkey=Gene;gene=ydfQ;locus_tag=EC55989_1054
NC_011748.1	RefSeq	CDS	1116717	1117250	.	+	0	ID=cds1003;Name=YP_002402147.1;Parent=gene1075;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002402147.1,GeneID:7144508;gbkey=CDS;product=membrane-associated lysozyme%3B Qin prophage;protein_id=YP_002402147.1;transl_table=11
NC_011748.1	RefSeq	gene	1117328	1117540	.	+	.	ID=gene1076;Name=EC55989_1055;Dbxref=GeneID:7148439;gbkey=Gene;locus_tag=EC55989_1055
NC_011748.1	RefSeq	CDS	1117328	1117540	.	+	0	ID=cds1004;Name=YP_002402148.1;Parent=gene1076;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402148.1,GeneID:7148439;gbkey=CDS;product=prophage protein;protein_id=YP_002402148.1;transl_table=11
NC_011748.1	RefSeq	gene	1117521	1117793	.	+	.	ID=gene1077;Name=EC55989_1056;Dbxref=GeneID:7144509;gbkey=Gene;locus_tag=EC55989_1056
NC_011748.1	RefSeq	CDS	1117521	1117793	.	+	0	ID=cds1005;Name=YP_002402149.1;Parent=gene1077;Note=Evidence 6 : Doubtful CDS;Dbxref=Genbank:YP_002402149.1,GeneID:7144509;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402149.1;transl_table=11
NC_011748.1	RefSeq	gene	1117809	1118360	.	+	.	ID=gene1078;Name=rz;Dbxref=GeneID:7144510;gbkey=Gene;gene=rz;locus_tag=EC55989_1058
NC_011748.1	RefSeq	CDS	1117809	1118360	.	+	0	ID=cds1006;Name=YP_002402150.1;Parent=gene1078;Note=Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402150.1,GeneID:7144510;gbkey=CDS;product=Endopeptidase %28Lysis protein%29 from bacteriophage origin;protein_id=YP_002402150.1;transl_table=11
NC_011748.1	RefSeq	gene	1118813	1119289	.	+	.	ID=gene1079;Name=EC55989_1059;Dbxref=GeneID:7147596;gbkey=Gene;locus_tag=EC55989_1059
NC_011748.1	RefSeq	CDS	1118813	1119289	.	+	0	ID=cds1007;Name=YP_002402151.1;Parent=gene1079;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402151.1,GeneID:7147596;gbkey=CDS;product=phage protein;protein_id=YP_002402151.1;transl_table=11
NC_011748.1	RefSeq	gene	1119286	1121409	.	+	.	ID=gene1080;Name=EC55989_1060;Dbxref=GeneID:7144511;gbkey=Gene;locus_tag=EC55989_1060
NC_011748.1	RefSeq	CDS	1119286	1121409	.	+	0	ID=cds1008;Name=YP_002402152.1;Parent=gene1080;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402152.1,GeneID:7144511;gbkey=CDS;product=phage terminase large subunit;protein_id=YP_002402152.1;transl_table=11
NC_011748.1	RefSeq	gene	1121382	1121618	.	+	.	ID=gene1081;Name=EC55989_1061;Dbxref=GeneID:7144512;gbkey=Gene;locus_tag=EC55989_1061
NC_011748.1	RefSeq	CDS	1121382	1121618	.	+	0	ID=cds1009;Name=YP_002402153.1;Parent=gene1081;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402153.1,GeneID:7144512;gbkey=CDS;product=phage protein;protein_id=YP_002402153.1;transl_table=11
NC_011748.1	RefSeq	gene	1121618	1123120	.	+	.	ID=gene1082;Name=EC55989_1062;Dbxref=GeneID:7144513;gbkey=Gene;locus_tag=EC55989_1062
NC_011748.1	RefSeq	CDS	1121618	1123120	.	+	0	ID=cds1010;Name=YP_002402154.1;Parent=gene1082;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402154.1,GeneID:7144513;gbkey=CDS;product=head-tail preconnector protein;protein_id=YP_002402154.1;transl_table=11
NC_011748.1	RefSeq	gene	1122918	1125089	.	+	.	ID=gene1083;Name=clp;Dbxref=GeneID:7144514;gbkey=Gene;gene=clp;locus_tag=EC55989_1063
NC_011748.1	RefSeq	CDS	1122918	1125089	.	+	0	ID=cds1011;Name=YP_002402155.1;Parent=gene1083;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402155.1,GeneID:7144514;gbkey=CDS;product=ATP-dependent Clp protease proteolytic subunit %28Endopeptidase Clp%29 of prophage;protein_id=YP_002402155.1;transl_table=11
NC_011748.1	RefSeq	gene	1125177	1125503	.	+	.	ID=gene1084;Name=EC55989_1064;Dbxref=GeneID:7145721;gbkey=Gene;locus_tag=EC55989_1064
NC_011748.1	RefSeq	CDS	1125177	1125503	.	+	0	ID=cds1012;Name=YP_002402156.1;Parent=gene1084;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402156.1,GeneID:7145721;gbkey=CDS;product=hypothetical membrane protein from phage origin;protein_id=YP_002402156.1;transl_table=11
NC_011748.1	RefSeq	gene	1125496	1125777	.	+	.	ID=gene1085;Name=EC55989_1065;Dbxref=GeneID:7144515;gbkey=Gene;locus_tag=EC55989_1065
NC_011748.1	RefSeq	CDS	1125496	1125777	.	+	0	ID=cds1013;Name=YP_002402157.1;Parent=gene1085;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402157.1,GeneID:7144515;gbkey=CDS;product=phage protein;protein_id=YP_002402157.1;transl_table=11
NC_011748.1	RefSeq	gene	1125774	1126403	.	+	.	ID=gene1086;Name=Z;Dbxref=GeneID:7144516;gbkey=Gene;gene=Z;locus_tag=EC55989_1066
NC_011748.1	RefSeq	CDS	1125774	1126403	.	+	0	ID=cds1014;Name=YP_002402158.1;Parent=gene1086;Note=Evidence 2b : Function of strongly homologous gene%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402158.1,GeneID:7144516;gbkey=CDS;product=Minor tail protein Z;protein_id=YP_002402158.1;transl_table=11
NC_011748.1	RefSeq	gene	1126416	1126814	.	+	.	ID=gene1087;Name=U;Dbxref=GeneID:7149486;gbkey=Gene;gene=U;locus_tag=EC55989_1067
NC_011748.1	RefSeq	CDS	1126416	1126814	.	+	0	ID=cds1015;Name=YP_002402159.1;Parent=gene1087;Note=Evidence 2b : Function of strongly homologous gene%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402159.1,GeneID:7149486;gbkey=CDS;product=Minor tail protein U;protein_id=YP_002402159.1;transl_table=11
NC_011748.1	RefSeq	gene	1126822	1127568	.	+	.	ID=gene1088;Name=EC55989_1068;Dbxref=GeneID:7147886;gbkey=Gene;locus_tag=EC55989_1068
NC_011748.1	RefSeq	CDS	1126822	1127568	.	+	0	ID=cds1016;Name=YP_002402160.1;Parent=gene1088;Note=Evidence 2b : Function of strongly homologous gene%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402160.1,GeneID:7147886;gbkey=CDS;product=Major tail protein V;protein_id=YP_002402160.1;transl_table=11
NC_011748.1	RefSeq	gene	1127587	1128018	.	+	.	ID=gene1089;Name=EC55989_1069;Dbxref=GeneID:7144517;gbkey=Gene;locus_tag=EC55989_1069
NC_011748.1	RefSeq	CDS	1127587	1128018	.	+	0	ID=cds1017;Name=YP_002402161.1;Parent=gene1089;Note=Evidence 2b : Function of strongly homologous gene%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402161.1,GeneID:7144517;gbkey=CDS;product=Minor tail protein G;protein_id=YP_002402161.1;transl_table=11
NC_011748.1	RefSeq	gene	1128045	1128449	.	+	.	ID=gene1090;Name=T;Dbxref=GeneID:7144518;gbkey=Gene;gene=T;locus_tag=EC55989_1070
NC_011748.1	RefSeq	CDS	1128045	1128449	.	+	0	ID=cds1018;Name=YP_002402162.1;Parent=gene1090;Note=Evidence 2b : Function of strongly homologous gene%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402162.1,GeneID:7144518;gbkey=CDS;product=Minor tail protein T;protein_id=YP_002402162.1;transl_table=11
NC_011748.1	RefSeq	gene	1128430	1131042	.	+	.	ID=gene1091;Name=EC55989_1071;Dbxref=GeneID:7147743;gbkey=Gene;locus_tag=EC55989_1071
NC_011748.1	RefSeq	CDS	1128430	1131042	.	+	0	ID=cds1019;Name=YP_002402163.1;Parent=gene1091;Note=Evidence 2b : Function of strongly homologous gene%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402163.1,GeneID:7147743;gbkey=CDS;product=Minor tail protein precursor H;protein_id=YP_002402163.1;transl_table=11
NC_011748.1	RefSeq	gene	1131039	1131371	.	+	.	ID=gene1092;Name=EC55989_1072;Dbxref=GeneID:7144519;gbkey=Gene;locus_tag=EC55989_1072
NC_011748.1	RefSeq	CDS	1131039	1131371	.	+	0	ID=cds1020;Name=YP_002402164.1;Parent=gene1092;Note=Evidence 2b : Function of strongly homologous gene%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402164.1,GeneID:7144519;gbkey=CDS;product=Minor tail protein M;protein_id=YP_002402164.1;transl_table=11
NC_011748.1	RefSeq	gene	1131371	1132069	.	+	.	ID=gene1093;Name=EC55989_1073;Dbxref=GeneID:7144520;gbkey=Gene;locus_tag=EC55989_1073
NC_011748.1	RefSeq	CDS	1131371	1132069	.	+	0	ID=cds1021;Name=YP_002402165.1;Parent=gene1093;Note=Evidence 2b : Function of strongly homologous gene%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402165.1,GeneID:7144520;gbkey=CDS;product=Minor tail protein L;protein_id=YP_002402165.1;transl_table=11
NC_011748.1	RefSeq	gene	1132032	1132817	.	+	.	ID=gene1094;Name=EC55989_1074;Dbxref=GeneID:7144521;gbkey=Gene;locus_tag=EC55989_1074
NC_011748.1	RefSeq	CDS	1132032	1132817	.	+	0	ID=cds1022;Name=YP_002402166.1;Parent=gene1094;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402166.1,GeneID:7144521;gbkey=CDS;product=tail fiber component K of prophage;protein_id=YP_002402166.1;transl_table=11
NC_011748.1	RefSeq	gene	1132715	1133386	.	+	.	ID=gene1095;Name=EC55989_1075;Dbxref=GeneID:7144522;gbkey=Gene;locus_tag=EC55989_1075
NC_011748.1	RefSeq	CDS	1132715	1133386	.	+	0	ID=cds1023;Name=YP_002402167.1;Parent=gene1095;Note=Evidence 2b : Function of strongly homologous gene%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402167.1,GeneID:7144522;gbkey=CDS;product=Tail assembly protein I;protein_id=YP_002402167.1;transl_table=11
NC_011748.1	RefSeq	gene	1133447	1136842	.	+	.	ID=gene1096;Name=EC55989_1076;Dbxref=GeneID:7144523;gbkey=Gene;locus_tag=EC55989_1076
NC_011748.1	RefSeq	CDS	1133447	1136842	.	+	0	ID=cds1024;Name=YP_002402168.1;Parent=gene1096;Note=Evidence 2b : Function of strongly homologous gene%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402168.1,GeneID:7144523;gbkey=CDS;product=Host specificity protein J;protein_id=YP_002402168.1;transl_table=11
NC_011748.1	RefSeq	gene	1136910	1137509	.	+	.	ID=gene1097;Name=EC55989_1077;Dbxref=GeneID:7144524;gbkey=Gene;locus_tag=EC55989_1077
NC_011748.1	RefSeq	CDS	1136910	1137509	.	+	0	ID=cds1025;Name=YP_002402169.1;Parent=gene1097;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402169.1,GeneID:7144524;gbkey=CDS;product=Lom-like outer membrane protein of prophage;protein_id=YP_002402169.1;transl_table=11
NC_011748.1	RefSeq	gene	1137661	1139064	.	+	.	ID=gene1098;Name=EC55989_1078;Dbxref=GeneID:7144525;gbkey=Gene;locus_tag=EC55989_1078
NC_011748.1	RefSeq	CDS	1137661	1139064	.	+	0	ID=cds1026;Name=YP_002402170.1;Parent=gene1098;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402170.1,GeneID:7144525;gbkey=CDS;product=tail fiber protein %28modular protein%29;protein_id=YP_002402170.1;transl_table=11
NC_011748.1	RefSeq	gene	1138986	1139681	.	+	.	ID=gene1099;Name=EC55989_1079;Dbxref=GeneID:7144526;gbkey=Gene;locus_tag=EC55989_1079
NC_011748.1	RefSeq	CDS	1138986	1139681	.	+	0	ID=cds1027;Name=YP_002402171.1;Parent=gene1099;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402171.1,GeneID:7144526;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402171.1;transl_table=11
NC_011748.1	RefSeq	gene	1140292	1140379	.	-	.	ID=gene1100;Name=EC55989_tRNA86;Dbxref=GeneID:7144527;gbkey=Gene;locus_tag=EC55989_tRNA86
NC_011748.1	RefSeq	tRNA	1140292	1140379	.	-	.	ID=rna49;Dbxref=GeneID:7144527;gbkey=tRNA;product=tRNA-Ser
NC_011748.1	RefSeq	exon	1140292	1140379	.	-	.	ID=id86;Parent=rna49;Dbxref=GeneID:7144527;gbkey=tRNA;product=tRNA-Ser
NC_011748.1	RefSeq	gene	1140806	1141924	.	+	.	ID=gene1101;Name=hyaA;Dbxref=GeneID:7145401;gbkey=Gene;gene=hyaA;locus_tag=EC55989_1080
NC_011748.1	RefSeq	CDS	1140806	1141924	.	+	0	ID=cds1028;Name=YP_002402172.1;Parent=gene1101;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 86192450%2C 90202716%2C 92215587%3B Product type e : enzyme;Dbxref=Genbank:YP_002402172.1,GeneID:7145401;gbkey=CDS;product=hydrogenase 1%2C small subunit;protein_id=YP_002402172.1;transl_table=11
NC_011748.1	RefSeq	gene	1141921	1143714	.	+	.	ID=gene1102;Name=hyaB;Dbxref=GeneID:7146482;gbkey=Gene;gene=hyaB;locus_tag=EC55989_1081
NC_011748.1	RefSeq	CDS	1141921	1143714	.	+	0	ID=cds1029;Name=YP_002402173.1;Parent=gene1102;Note=involved in hydrogen cycling during fermentative growth;Dbxref=Genbank:YP_002402173.1,GeneID:7146482;gbkey=CDS;product=hydrogenase 1 large subunit;protein_id=YP_002402173.1;transl_table=11
NC_011748.1	RefSeq	gene	1143733	1144440	.	+	.	ID=gene1103;Name=hyaC;Dbxref=GeneID:7146483;gbkey=Gene;gene=hyaC;locus_tag=EC55989_1082
NC_011748.1	RefSeq	CDS	1143733	1144440	.	+	0	ID=cds1030;Name=YP_002402174.1;Parent=gene1103;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 90202716%2C 91310595%2C 92215587%3B Product type c : carrier;Dbxref=Genbank:YP_002402174.1,GeneID:7146483;gbkey=CDS;product=hydrogenase 1 b-type cytochrome subunit;protein_id=YP_002402174.1;transl_table=11
NC_011748.1	RefSeq	gene	1144437	1145024	.	+	.	ID=gene1104;Name=hyaD;Dbxref=GeneID:7146484;gbkey=Gene;gene=hyaD;locus_tag=EC55989_1083
NC_011748.1	RefSeq	CDS	1144437	1145024	.	+	0	ID=cds1031;Name=YP_002402175.1;Parent=gene1104;Note=HyaD%3B endopeptidase involved in the cleavage of the C-terminus end of HyaB %28the large subunit of hydrogenase 1%29;Dbxref=Genbank:YP_002402175.1,GeneID:7146484;gbkey=CDS;product=hydrogenase 1 maturation protease;protein_id=YP_002402175.1;transl_table=11
NC_011748.1	RefSeq	gene	1145021	1145419	.	+	.	ID=gene1105;Name=hyaE;Dbxref=GeneID:7146485;gbkey=Gene;gene=hyaE;locus_tag=EC55989_1084
NC_011748.1	RefSeq	CDS	1145021	1145419	.	+	0	ID=cds1032;Name=YP_002402176.1;Parent=gene1105;Note=involved in processing hydrogenase proteins HyaA and HyaB;Dbxref=Genbank:YP_002402176.1,GeneID:7146485;gbkey=CDS;product=hydrogenase-1 operon protein HyaE;protein_id=YP_002402176.1;transl_table=11
NC_011748.1	RefSeq	gene	1145416	1146273	.	+	.	ID=gene1106;Name=hyaF;Dbxref=GeneID:7146486;gbkey=Gene;gene=hyaF;locus_tag=EC55989_1085
NC_011748.1	RefSeq	CDS	1145416	1146273	.	+	0	ID=cds1033;Name=YP_002402177.1;Parent=gene1106;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 90202716%2C 91310595%2C 92215587%3B Product type f : factor;Dbxref=Genbank:YP_002402177.1,GeneID:7146486;gbkey=CDS;product=protein involved in nickel incorporation into hydrogenase-1 proteins;protein_id=YP_002402177.1;transl_table=11
NC_011748.1	RefSeq	gene	1146407	1147951	.	+	.	ID=gene1107;Name=appC;Dbxref=GeneID:7146487;gbkey=Gene;gene=appC;locus_tag=EC55989_1086
NC_011748.1	RefSeq	CDS	1146407	1147951	.	+	0	ID=cds1034;Name=YP_002402178.1;Parent=gene1107;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 92049231%2C 96198179%3B Product type c : carrier;Dbxref=Genbank:YP_002402178.1,GeneID:7146487;gbkey=CDS;product=cytochrome bd-II oxidase subunit I;protein_id=YP_002402178.1;transl_table=11
NC_011748.1	RefSeq	gene	1147963	1149099	.	+	.	ID=gene1108;Name=appB;Dbxref=GeneID:7145510;gbkey=Gene;gene=appB;locus_tag=EC55989_1087
NC_011748.1	RefSeq	CDS	1147963	1149099	.	+	0	ID=cds1035;Name=YP_002402179.1;Parent=gene1108;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 92049231%2C 96198179%3B Product type c : carrier;Dbxref=Genbank:YP_002402179.1,GeneID:7145510;gbkey=CDS;product=cytochrome bd-II oxidase subunit II;protein_id=YP_002402179.1;transl_table=11
NC_011748.1	RefSeq	gene	1149284	1150582	.	+	.	ID=gene1109;Name=appA;Dbxref=GeneID:7145509;gbkey=Gene;gene=appA;locus_tag=EC55989_1088
NC_011748.1	RefSeq	CDS	1149284	1150582	.	+	0	ID=cds1036;Name=YP_002402180.1;Parent=gene1109;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 20122624%2C 92049231%2C 93054596%2C 10696472%2C 2168385%2C 3038201%2C 8387749%3B Product type e : enzyme;Dbxref=Genbank:YP_002402180.1,GeneID:7145509;gbkey=CDS;product=phosphoanhydride phosphorylase;protein_id=YP_002402180.1;transl_table=11
NC_011748.1	RefSeq	gene	1150697	1152877	.	-	.	ID=gene1110;Name=yccC;Dbxref=GeneID:7145508;gbkey=Gene;gene=yccC;locus_tag=EC55989_1089
NC_011748.1	RefSeq	CDS	1150697	1152877	.	-	0	ID=cds1037;Name=YP_002402181.1;Parent=gene1110;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 10369665%2C 11090276%2C 2168385%2C 7984428%3B Product type e : enzyme;Dbxref=Genbank:YP_002402181.1,GeneID:7145508;gbkey=CDS;product=cryptic autophosphorylating protein tyrosine kinase Etk;protein_id=YP_002402181.1;transl_table=11
NC_011748.1	RefSeq	gene	1152897	1153343	.	-	.	ID=gene1111;Name=etp;Dbxref=GeneID:7148270;gbkey=Gene;gene=etp;locus_tag=EC55989_1090
NC_011748.1	RefSeq	CDS	1152897	1153343	.	-	0	ID=cds1038;Name=YP_002402182.1;Parent=gene1111;Note=Etk and Etp are a tyrosine kinase-tyrosine phosphatase pair%2C etp dephosphorylates etk;Dbxref=Genbank:YP_002402182.1,GeneID:7148270;gbkey=CDS;product=phosphotyrosine-protein phosphatase;protein_id=YP_002402182.1;transl_table=11
NC_011748.1	RefSeq	gene	1153331	1154470	.	-	.	ID=gene1112;Name=yccZ;Dbxref=GeneID:7146025;gbkey=Gene;gene=yccZ;locus_tag=EC55989_1091
NC_011748.1	RefSeq	CDS	1153331	1154470	.	-	0	ID=cds1039;Name=YP_002402183.1;Parent=gene1112;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 8759852%3B Product type pt :  transporter;Dbxref=Genbank:YP_002402183.1,GeneID:7146025;gbkey=CDS;product=exopolysaccharide export protein;protein_id=YP_002402183.1;transl_table=11
NC_011748.1	RefSeq	gene	1154516	1156612	.	-	.	ID=gene1113;Name=ymcA;Dbxref=GeneID:7148282;gbkey=Gene;gene=ymcA;locus_tag=EC55989_1092
NC_011748.1	RefSeq	CDS	1154516	1156612	.	-	0	ID=cds1040;Name=YP_002402184.1;Parent=gene1113;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402184.1,GeneID:7148282;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402184.1;transl_table=11
NC_011748.1	RefSeq	gene	1156612	1157358	.	-	.	ID=gene1114;Name=ymcB;Dbxref=GeneID:7149264;gbkey=Gene;gene=ymcB;locus_tag=EC55989_1093
NC_011748.1	RefSeq	CDS	1156612	1157358	.	-	0	ID=cds1041;Name=YP_002402185.1;Parent=gene1114;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402185.1,GeneID:7149264;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402185.1;transl_table=11
NC_011748.1	RefSeq	gene	1157355	1157999	.	-	.	ID=gene1115;Name=ymcC;Dbxref=GeneID:7149265;gbkey=Gene;gene=ymcC;locus_tag=EC55989_1094
NC_011748.1	RefSeq	CDS	1157355	1157999	.	-	0	ID=cds1042;Name=YP_002402186.1;Parent=gene1115;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002402186.1,GeneID:7149265;gbkey=CDS;product=outer membrane lipoprotein;protein_id=YP_002402186.1;transl_table=11
NC_011748.1	RefSeq	gene	1158081	1158353	.	-	.	ID=gene1116;Name=EC55989_1095;Dbxref=GeneID:7149266;gbkey=Gene;locus_tag=EC55989_1095
NC_011748.1	RefSeq	CDS	1158081	1158353	.	-	0	ID=cds1043;Name=YP_002402187.1;Parent=gene1116;Dbxref=Genbank:YP_002402187.1,GeneID:7149266;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402187.1;transl_table=11
NC_011748.1	RefSeq	gene	1158106	1158411	.	-	.	ID=gene1117;Name=ymcD;Dbxref=GeneID:7144528;gbkey=Gene;gene=ymcD;locus_tag=EC55989_1096
NC_011748.1	RefSeq	CDS	1158106	1158411	.	-	0	ID=cds1044;Name=YP_002402188.1;Parent=gene1117;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402188.1,GeneID:7144528;gbkey=CDS;product=inner membrane protein;protein_id=YP_002402188.1;transl_table=11
NC_011748.1	RefSeq	gene	1158853	1159065	.	-	.	ID=gene1118;Name=cspH;Dbxref=GeneID:7149267;gbkey=Gene;gene=cspH;locus_tag=EC55989_1097
NC_011748.1	RefSeq	CDS	1158853	1159065	.	-	0	ID=cds1045;Name=YP_002402189.1;Parent=gene1118;Note=Evidence 2b : Function of strongly homologous gene%3B PubMedId : 9484881%2C 9439003%3B Product type f : factor;Dbxref=Genbank:YP_002402189.1,GeneID:7149267;gbkey=CDS;product=stress protein%2C member of the CspA-family;protein_id=YP_002402189.1;transl_table=11
NC_011748.1	RefSeq	gene	1159124	1159627	.	-	.	ID=gene1119;Name=insB;Dbxref=GeneID:7145782;gbkey=Gene;gene=insB;locus_tag=EC55989_1098
NC_011748.1	RefSeq	CDS	1159124	1159627	.	-	0	ID=cds1046;Name=YP_002402190.1;Parent=gene1119;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 9689094%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402190.1,GeneID:7145782;gbkey=CDS;product=IS1 transposase InsAB%27;protein_id=YP_002402190.1;transl_table=11
NC_011748.1	RefSeq	gene	1159546	1159821	.	-	.	ID=gene1120;Name=insA;Dbxref=GeneID:7146584;gbkey=Gene;gene=insA;locus_tag=EC55989_1099
NC_011748.1	RefSeq	CDS	1159546	1159821	.	-	0	ID=cds1047;Name=YP_002402191.1;Parent=gene1120;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 9689094%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402191.1,GeneID:7146584;gbkey=CDS;product=IS1 repressor protein InsA;protein_id=YP_002402191.1;transl_table=11
NC_011748.1	RefSeq	gene	1160128	1160340	.	+	.	ID=gene1121;Name=cspG;Dbxref=GeneID:7146572;gbkey=Gene;gene=cspG;locus_tag=EC55989_1100
NC_011748.1	RefSeq	CDS	1160128	1160340	.	+	0	ID=cds1048;Name=YP_002402192.1;Parent=gene1121;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 9484881%2C 15466053%2C 8631696%2C 9439003%3B Product type r : regulator;Dbxref=Genbank:YP_002402192.1,GeneID:7146572;gbkey=CDS;product=cold shock protein CspG;protein_id=YP_002402192.1;transl_table=11
NC_011748.1	RefSeq	gene	1160734	1160907	.	+	.	ID=gene1122;Name=gnsA;Dbxref=GeneID:7145781;gbkey=Gene;gene=gnsA;locus_tag=EC55989_1101
NC_011748.1	RefSeq	CDS	1160734	1160907	.	+	0	ID=cds1049;Name=YP_002402193.1;Parent=gene1122;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 15317805%2C 11544213%3B Product type pr :  regulator;Dbxref=Genbank:YP_002402193.1,GeneID:7145781;gbkey=CDS;product=regulator of phosphatidylethanolamine synthesis;protein_id=YP_002402193.1;transl_table=11
NC_011748.1	RefSeq	gene	1160956	1162029	.	-	.	ID=gene1123;Name=yccM;Dbxref=GeneID:7146348;gbkey=Gene;gene=yccM;locus_tag=EC55989_1102
NC_011748.1	RefSeq	CDS	1160956	1162029	.	-	0	ID=cds1050;Name=YP_002402194.1;Parent=gene1123;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pc :  carrier;Dbxref=Genbank:YP_002402194.1,GeneID:7146348;gbkey=CDS;product=4Fe-4S binding protein;protein_id=YP_002402194.1;transl_table=11
NC_011748.1	RefSeq	gene	1162101	1164845	.	-	.	ID=gene1124;Name=torS;Dbxref=GeneID:7148274;gbkey=Gene;gene=torS;locus_tag=EC55989_1103
NC_011748.1	RefSeq	CDS	1162101	1164845	.	-	0	ID=cds1051;Name=YP_002402195.1;Parent=gene1124;Note=Member of the two-component regulatory system torS%2FtorR involved in the anaerobic utilization of trimethylamine-N-oxide;Dbxref=Genbank:YP_002402195.1,GeneID:7148274;gbkey=CDS;product=hybrid sensory histidine kinase TorS;protein_id=YP_002402195.1;transl_table=11
NC_011748.1	RefSeq	gene	1164928	1165956	.	+	.	ID=gene1125;Name=torT;Dbxref=GeneID:7147825;gbkey=Gene;gene=torT;locus_tag=EC55989_1104
NC_011748.1	RefSeq	CDS	1164928	1165956	.	+	0	ID=cds1052;Name=YP_002402196.1;Parent=gene1125;Note=periplasmic sensory protein associated with the TorRS two-component regulatory system;Dbxref=Genbank:YP_002402196.1,GeneID:7147825;gbkey=CDS;product=TMAO reductase system periplasmic protein TorT;protein_id=YP_002402196.1;transl_table=11
NC_011748.1	RefSeq	gene	1165929	1166621	.	-	.	ID=gene1126;Name=torR;Dbxref=GeneID:7147826;gbkey=Gene;gene=torR;locus_tag=EC55989_1105
NC_011748.1	RefSeq	CDS	1165929	1166621	.	-	0	ID=cds1053;Name=YP_002402197.1;Parent=gene1126;Note=response regulator in two-component regulatory system with TorS%3B involved in regulation of trimethylamine N-oxide reductase genes;Dbxref=Genbank:YP_002402197.1,GeneID:7147826;gbkey=CDS;product=DNA-binding transcriptional regulator TorR;protein_id=YP_002402197.1;transl_table=11
NC_011748.1	RefSeq	gene	1166751	1167923	.	+	.	ID=gene1127;Name=torC;Dbxref=GeneID:7147824;gbkey=Gene;gene=torC;locus_tag=EC55989_1106
NC_011748.1	RefSeq	CDS	1166751	1167923	.	+	0	ID=cds1054;Name=YP_002402198.1;Parent=gene1127;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 94293785%2C 94314186%2C 99340208%2C 11056172%2C 11562502%3B Product type c : carrier;Dbxref=Genbank:YP_002402198.1,GeneID:7147824;gbkey=CDS;product=trimethylamine N-oxide %28TMAO%29 reductase I%2C cytochrome c-type subunit;protein_id=YP_002402198.1;transl_table=11
NC_011748.1	RefSeq	gene	1167923	1170469	.	+	.	ID=gene1128;Name=torA;Dbxref=GeneID:7147821;gbkey=Gene;gene=torA;locus_tag=EC55989_1107
NC_011748.1	RefSeq	CDS	1167923	1170469	.	+	0	ID=cds1055;Name=YP_002402199.1;Parent=gene1128;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 88193091%2C 90089471%2C 94293785%2C 8302830%2C 8022286%3B Product type e : enzyme;Dbxref=Genbank:YP_002402199.1,GeneID:7147821;gbkey=CDS;product=trimethylamine N-oxide %28TMAO%29 reductase I%2C catalytic subunit;protein_id=YP_002402199.1;transl_table=11
NC_011748.1	RefSeq	gene	1170466	1171065	.	+	.	ID=gene1129;Name=torD;Dbxref=GeneID:7147820;gbkey=Gene;gene=torD;locus_tag=EC55989_1108
NC_011748.1	RefSeq	CDS	1170466	1171065	.	+	0	ID=cds1056;Name=YP_002402200.1;Parent=gene1129;Note=TorD%3B involved in the biogenesis of torA%3B acts on torA before the insertion of the molybdenum cofactor and%2C as a result%2C probably favors a conformation of the apoenzyme that is competent for acquiring the cofactor;Dbxref=Genbank:YP_002402200.1,GeneID:7147820;gbkey=CDS;product=chaperone protein TorD;protein_id=YP_002402200.1;transl_table=11
NC_011748.1	RefSeq	gene	1171158	1171463	.	-	.	ID=gene1130;Name=cbpM;Dbxref=GeneID:7147822;gbkey=Gene;gene=cbpM;locus_tag=EC55989_1109
NC_011748.1	RefSeq	CDS	1171158	1171463	.	-	0	ID=cds1057;Name=YP_002402201.1;Parent=gene1130;Note=with CpbA modulates the activity of the dnaK chaperone system%3B interacts with CbpA and inhibits both the DnaJ-like co-chaperone activity and the DNA binding activity of CbpA;Dbxref=Genbank:YP_002402201.1,GeneID:7147822;gbkey=CDS;product=chaperone-modulator protein CbpM;protein_id=YP_002402201.1;transl_table=11
NC_011748.1	RefSeq	gene	1171463	1172383	.	-	.	ID=gene1131;Name=cbpA;Dbxref=GeneID:7145668;gbkey=Gene;gene=cbpA;locus_tag=EC55989_1110
NC_011748.1	RefSeq	CDS	1171463	1172383	.	-	0	ID=cds1058;Name=YP_002402202.1;Parent=gene1131;Note=functional analog of DnaJ%3B co-chaperone with DnaK%2C molecular chaperone in an adaptive response to environmental stresses other than heat shock;Dbxref=Genbank:YP_002402202.1,GeneID:7145668;gbkey=CDS;product=curved DNA-binding protein CbpA;protein_id=YP_002402202.1;transl_table=11
NC_011748.1	RefSeq	gene	1172716	1173903	.	+	.	ID=gene1132;Name=yccE;Dbxref=GeneID:7145667;gbkey=Gene;gene=yccE;locus_tag=EC55989_1111
NC_011748.1	RefSeq	CDS	1172716	1173903	.	+	0	ID=cds1059;Name=YP_002402203.1;Parent=gene1132;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 8302830;Dbxref=Genbank:YP_002402203.1,GeneID:7145667;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402203.1;transl_table=11
NC_011748.1	RefSeq	gene	1174192	1175433	.	+	.	ID=gene1133;Name=agp;Dbxref=GeneID:7148271;gbkey=Gene;gene=agp;locus_tag=EC55989_1112
NC_011748.1	RefSeq	CDS	1174192	1175433	.	+	0	ID=cds1060;Name=YP_002402204.1;Parent=gene1133;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 12455612%2C 90368616%2C 91297199%2C 2153660%2C 9298646%3B Product type e : enzyme;Dbxref=Genbank:YP_002402204.1,GeneID:7148271;gbkey=CDS;product=glucose-1-phosphatase%2Finositol phosphatase;protein_id=YP_002402204.1;transl_table=11
NC_011748.1	RefSeq	gene	1175471	1175698	.	-	.	ID=gene1134;Name=yccJ;Dbxref=GeneID:7145473;gbkey=Gene;gene=yccJ;locus_tag=EC55989_1113
NC_011748.1	RefSeq	CDS	1175471	1175698	.	-	0	ID=cds1061;Name=YP_002402205.1;Parent=gene1134;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402205.1,GeneID:7145473;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402205.1;transl_table=11
NC_011748.1	RefSeq	gene	1175719	1176315	.	-	.	ID=gene1135;Name=wrbA;Dbxref=GeneID:7148273;gbkey=Gene;gene=wrbA;locus_tag=EC55989_1114
NC_011748.1	RefSeq	CDS	1175719	1176315	.	-	0	ID=cds1062;Name=YP_002402206.1;Parent=gene1135;Note=stationary phase protein that binds TrpR repressor;Dbxref=Genbank:YP_002402206.1,GeneID:7148273;gbkey=CDS;product=TrpR binding protein WrbA;protein_id=YP_002402206.1;transl_table=11
NC_011748.1	RefSeq	gene	1176525	1176755	.	+	.	ID=gene1136;Name=EC55989_1115;Dbxref=GeneID:7147973;gbkey=Gene;locus_tag=EC55989_1115
NC_011748.1	RefSeq	CDS	1176525	1176755	.	+	0	ID=cds1063;Name=YP_002402207.1;Parent=gene1136;Note=Evidence 6 : Doubtful CDS;Dbxref=Genbank:YP_002402207.1,GeneID:7147973;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402207.1;transl_table=11
NC_011748.1	RefSeq	gene	1176688	1176861	.	+	.	ID=gene1137;Name=ymdF;Dbxref=GeneID:7144529;gbkey=Gene;gene=ymdF;locus_tag=EC55989_1116
NC_011748.1	RefSeq	CDS	1176688	1176861	.	+	0	ID=cds1064;Name=YP_002402208.1;Parent=gene1137;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402208.1,GeneID:7144529;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402208.1;transl_table=11
NC_011748.1	RefSeq	gene	1176944	1178272	.	-	.	ID=gene1138;Name=rutG;Dbxref=GeneID:7149271;gbkey=Gene;gene=rutG;locus_tag=EC55989_1117
NC_011748.1	RefSeq	CDS	1176944	1178272	.	-	0	ID=cds1065;Name=YP_002402209.1;Parent=gene1138;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 16540542%3B Product type t : transporter;Dbxref=Genbank:YP_002402209.1,GeneID:7149271;gbkey=CDS;product=pyrimidine transporter;protein_id=YP_002402209.1;transl_table=11
NC_011748.1	RefSeq	gene	1178293	1178787	.	-	.	ID=gene1139;Name=rutF;Dbxref=GeneID:7147567;gbkey=Gene;gene=rutF;locus_tag=EC55989_1118
NC_011748.1	RefSeq	CDS	1178293	1178787	.	-	0	ID=cds1066;Name=YP_002402210.1;Parent=gene1139;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 16540542%2C 10633095%3B Product type e : enzyme;Dbxref=Genbank:YP_002402210.1,GeneID:7147567;gbkey=CDS;product=flavin:NADH oxidoreductase subunit of alternative pyrimidine degradation pathway;protein_id=YP_002402210.1;transl_table=11
NC_011748.1	RefSeq	gene	1178798	1179388	.	-	.	ID=gene1140;Name=rutE;Dbxref=GeneID:7147566;gbkey=Gene;gene=rutE;locus_tag=EC55989_1119
NC_011748.1	RefSeq	CDS	1178798	1179388	.	-	0	ID=cds1067;Name=YP_002402211.1;Parent=gene1140;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 16540542%3B Product type e : enzyme;Dbxref=Genbank:YP_002402211.1,GeneID:7147566;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402211.1;transl_table=11
NC_011748.1	RefSeq	gene	1179398	1180198	.	-	.	ID=gene1141;Name=rutD;Dbxref=GeneID:7147565;gbkey=Gene;gene=rutD;locus_tag=EC55989_1120
NC_011748.1	RefSeq	CDS	1179398	1180198	.	-	0	ID=cds1068;Name=YP_002402212.1;Parent=gene1141;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 16540542%3B Product type e : enzyme;Dbxref=Genbank:YP_002402212.1,GeneID:7147565;gbkey=CDS;product=enzyme of the alternative pyrimidine degradation pathway;protein_id=YP_002402212.1;transl_table=11
NC_011748.1	RefSeq	gene	1180206	1180592	.	-	.	ID=gene1142;Name=rutC;Dbxref=GeneID:7147564;gbkey=Gene;gene=rutC;locus_tag=EC55989_1121
NC_011748.1	RefSeq	CDS	1180206	1180592	.	-	0	ID=cds1069;Name=YP_002402213.1;Parent=gene1142;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 16540542%3B Product type e : enzyme;Dbxref=Genbank:YP_002402213.1,GeneID:7147564;gbkey=CDS;product=enzyme of the alternative pyrimidine degradation pathway;protein_id=YP_002402213.1;transl_table=11
NC_011748.1	RefSeq	gene	1180604	1181296	.	-	.	ID=gene1143;Name=rutB;Dbxref=GeneID:7147563;gbkey=Gene;gene=rutB;locus_tag=EC55989_1122
NC_011748.1	RefSeq	CDS	1180604	1181296	.	-	0	ID=cds1070;Name=YP_002402214.1;Parent=gene1143;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 16540542%3B Product type e : enzyme;Dbxref=Genbank:YP_002402214.1,GeneID:7147563;gbkey=CDS;product=enzyme of the alternative pyrimidine degradation pathway;protein_id=YP_002402214.1;transl_table=11
NC_011748.1	RefSeq	STS	1181295	1181388	.	+	.	ID=id87;Dbxref=UniSTS:230439;gbkey=STS
NC_011748.1	RefSeq	gene	1181296	1182444	.	-	.	ID=gene1144;Name=rutA;Dbxref=GeneID:7147562;gbkey=Gene;gene=rutA;locus_tag=EC55989_1123
NC_011748.1	RefSeq	CDS	1181296	1182444	.	-	0	ID=cds1071;Name=YP_002402215.1;Parent=gene1144;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 16540542%3B Product type e : enzyme;Dbxref=Genbank:YP_002402215.1,GeneID:7147562;gbkey=CDS;product=monooxygenase of the alternative pyrimidine degradation pathway;protein_id=YP_002402215.1;transl_table=11
NC_011748.1	RefSeq	gene	1182675	1183313	.	+	.	ID=gene1145;Name=rutR;Dbxref=GeneID:7147561;gbkey=Gene;gene=rutR;locus_tag=EC55989_1124
NC_011748.1	RefSeq	CDS	1182675	1183313	.	+	0	ID=cds1072;Name=YP_002402216.1;Parent=gene1145;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 16540542%3B Product type r : regulator;Dbxref=Genbank:YP_002402216.1,GeneID:7147561;gbkey=CDS;product=DNA-binding transcriptional regulator of the alternative pyrimidine degradation pathway;protein_id=YP_002402216.1;transl_table=11
NC_011748.1	RefSeq	gene	1183353	1187315	.	-	.	ID=gene1146;Name=putA;Dbxref=GeneID:7147568;gbkey=Gene;gene=putA;locus_tag=EC55989_1125
NC_011748.1	RefSeq	CDS	1183353	1187315	.	-	0	ID=cds1073;Name=YP_002402217.1;Parent=gene1146;Note=proline utilization protein A%3B multifunctional protein that functions in proline catabolism in the first two enzymatic steps resulting in the conversion of proline to glutamate%3B in Escherichai coli this protein also self-regulates transcription via a DNA-binding domain at the N-terminus%3B forms dimers and is a peripherally membrane-associated protein;Dbxref=Genbank:YP_002402217.1,GeneID:7147568;gbkey=CDS;product=trifunctional transcriptional regulator%2Fproline dehydrogenase%2Fpyrroline-5-carboxylate dehydrogenase;protein_id=YP_002402217.1;transl_table=11
NC_011748.1	RefSeq	gene	1187738	1189246	.	+	.	ID=gene1147;Name=putP;Dbxref=GeneID:7147306;gbkey=Gene;gene=putP;locus_tag=EC55989_1126
NC_011748.1	RefSeq	CDS	1187738	1189246	.	+	0	ID=cds1074;Name=YP_002402218.1;Parent=gene1147;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 12923181%2C 88213396%2C 91227628%2C 93132799%2C 98359785%2C 1400239%2C 1567896%2C 3053649%2C 3053687%2C 3302614%2C 3325781%2C 8119910%3B Product type t : transporter;Dbxref=Genbank:YP_002402218.1,GeneID:7147306;gbkey=CDS;product=proline:sodium symporter;protein_id=YP_002402218.1;transl_table=11
NC_011748.1	RefSeq	gene	1189779	1190618	.	+	.	ID=gene1148;Name=efeU;Dbxref=GeneID:7147307;gbkey=Gene;gene=efeU;locus_tag=EC55989_1127
NC_011748.1	RefSeq	CDS	1189779	1190618	.	+	0	ID=cds1075;Name=YP_002402219.1;Parent=gene1148;Note=Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism%3B Product type t : transporter;Dbxref=Genbank:YP_002402219.1,GeneID:7147307;gbkey=CDS;product=ferrous iron permease;protein_id=YP_002402219.1;transl_table=11
NC_011748.1	RefSeq	gene	1190676	1191803	.	+	.	ID=gene1149;Name=efeO;Dbxref=GeneID:7145980;gbkey=Gene;gene=efeO;locus_tag=EC55989_1128
NC_011748.1	RefSeq	CDS	1190676	1191803	.	+	0	ID=cds1076;Name=YP_002402220.1;Parent=gene1149;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 17627767%2C 10493123%3B Product type t : transporter;Dbxref=Genbank:YP_002402220.1,GeneID:7145980;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402220.1;transl_table=11
NC_011748.1	RefSeq	gene	1191809	1193080	.	+	.	ID=gene1150;Name=efeB;Dbxref=GeneID:7145979;gbkey=Gene;gene=efeB;locus_tag=EC55989_1129
NC_011748.1	RefSeq	CDS	1191809	1193080	.	+	0	ID=cds1077;Name=YP_002402221.1;Parent=gene1150;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 17627767%2C 16551627%2C 15375152%3B Product type t : transporter;Dbxref=Genbank:YP_002402221.1,GeneID:7145979;gbkey=CDS;product=iron transport heme-binding periplasmic protein;protein_id=YP_002402221.1;transl_table=11
NC_011748.1	RefSeq	gene	1193147	1193344	.	-	.	ID=gene1151;Name=EC55989_1130;Dbxref=GeneID:7145978;gbkey=Gene;locus_tag=EC55989_1130
NC_011748.1	RefSeq	CDS	1193147	1193344	.	-	0	ID=cds1078;Name=YP_002402222.1;Parent=gene1151;Dbxref=Genbank:YP_002402222.1,GeneID:7145978;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402222.1;transl_table=11
NC_011748.1	RefSeq	gene	1193564	1194487	.	+	.	ID=gene1152;Name=phoH;Dbxref=GeneID:7144530;gbkey=Gene;gene=phoH;locus_tag=EC55989_1131
NC_011748.1	RefSeq	CDS	1193564	1194487	.	+	0	ID=cds1079;Name=YP_002402223.1;Parent=gene1152;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 8444794%2C 2160940%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002402223.1,GeneID:7144530;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402223.1;transl_table=11
NC_011748.1	RefSeq	gene	1194537	1194950	.	-	.	ID=gene1153;Name=pgaD;Dbxref=GeneID:7147182;gbkey=Gene;gene=pgaD;locus_tag=EC55989_1132
NC_011748.1	RefSeq	CDS	1194537	1194950	.	-	0	ID=cds1080;Name=YP_002402224.1;Parent=gene1153;Note=in Yersinia this gene is involved in biofilm formation and hemin adsorption%3B in Escherichia coli it is involved in PGA biosynthesis and export;Dbxref=Genbank:YP_002402224.1,GeneID:7147182;gbkey=CDS;product=PGA biosynthesis protein;protein_id=YP_002402224.1;transl_table=11
NC_011748.1	RefSeq	gene	1194952	1196277	.	-	.	ID=gene1154;Name=pgaC;Dbxref=GeneID:7147149;gbkey=Gene;gene=pgaC;locus_tag=EC55989_1133
NC_011748.1	RefSeq	CDS	1194952	1196277	.	-	0	ID=cds1081;Name=YP_002402225.1;Parent=gene1154;Note=predicted polysaccharide polymerase involved in biofilm formation%3B required for the synthesis of the beta-1%2C6-N-acetylglucosamine polysaccharide%3B PgaC%3B in Yersinia the HmsR protein is an inner membrane protein;Dbxref=Genbank:YP_002402225.1,GeneID:7147149;gbkey=CDS;product=N-glycosyltransferase;protein_id=YP_002402225.1;transl_table=11
NC_011748.1	RefSeq	gene	1196270	1198288	.	-	.	ID=gene1155;Name=pgaB;Dbxref=GeneID:7147148;gbkey=Gene;gene=pgaB;locus_tag=EC55989_1134
NC_011748.1	RefSeq	CDS	1196270	1198288	.	-	0	ID=cds1082;Name=YP_002402226.1;Parent=gene1155;Note=in Yersinia this protein is involved in biofilm formation and hemin adsorption%3B related protein PgaB in Escherichia coli is an outer membrane N-deacetylase involved in poly-beta-1%2C6-N-acetyl-D-glucosamine %28PGA%29 export;Dbxref=Genbank:YP_002402226.1,GeneID:7147148;gbkey=CDS;product=outer membrane N-deacetylase;protein_id=YP_002402226.1;transl_table=11
NC_011748.1	RefSeq	gene	1198297	1200720	.	-	.	ID=gene1156;Name=pgaA;Dbxref=GeneID:7147147;gbkey=Gene;gene=pgaA;locus_tag=EC55989_1135
NC_011748.1	RefSeq	CDS	1198297	1200720	.	-	0	ID=cds1083;Name=YP_002402227.1;Parent=gene1156;Note=outer membrane protein essential for the synthesis of poly-beta-1%2C6-N-acetyl-D-glucosamine %28PGA%29%3B adhesin required for biofilm formation%3B PgaA %28HmsH%29 seems to translocate and%2For dock PGA to the cell surface%3B member of the hmsHFRS %28ycdSRQP or pgaABCD in Escherichia coli%29 operon in Yersinia;Dbxref=Genbank:YP_002402227.1,GeneID:7147147;gbkey=CDS;product=outer membrane protein PgaA;protein_id=YP_002402227.1;transl_table=11
NC_011748.1	RefSeq	gene	1201027	1201302	.	+	.	ID=gene1157;Name=insA;Dbxref=GeneID:7147146;gbkey=Gene;gene=insA;locus_tag=EC55989_1136
NC_011748.1	RefSeq	CDS	1201027	1201302	.	+	0	ID=cds1084;Name=YP_002402228.1;Parent=gene1157;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 9689094%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402228.1,GeneID:7147146;gbkey=CDS;product=IS1 repressor protein InsA;protein_id=YP_002402228.1;transl_table=11
NC_011748.1	RefSeq	gene	1201221	1201724	.	+	.	ID=gene1158;Name=insB;Dbxref=GeneID:7146573;gbkey=Gene;gene=insB;locus_tag=EC55989_1137
NC_011748.1	RefSeq	CDS	1201221	1201724	.	+	0	ID=cds1085;Name=YP_002402229.1;Parent=gene1158;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 9689094%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402229.1,GeneID:7146573;gbkey=CDS;product=IS1 transposase InsAB%27;protein_id=YP_002402229.1;transl_table=11
NC_011748.1	RefSeq	gene	1201775	1202902	.	+	.	ID=gene1159;Name=EC55989_1138;Dbxref=GeneID:7146585;gbkey=Gene;locus_tag=EC55989_1138
NC_011748.1	RefSeq	CDS	1201775	1202902	.	+	0	ID=cds1086;Name=YP_002402230.1;Parent=gene1159;Note=Evidence 2b : Function of strongly homologous gene%3B PubMedId : 10781570%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002402230.1,GeneID:7146585;gbkey=CDS;product=transposase%2C IS4 family%2C IS10;protein_id=YP_002402230.1;transl_table=11
NC_011748.1	RefSeq	gene	1203113	1203700	.	+	.	ID=gene1160;Name=ycdT;Dbxref=GeneID:7144531;gbkey=Gene;gene=ycdT;locus_tag=EC55989_1139;pseudo=true
NC_011748.1	RefSeq	region	1203113	1203700	.	+	.	ID=id88;Note=fragment of  diguanylate cyclase %28part 1%29%3BEvidence 7 : Gene remnant%3B Product type pe :  enzyme;Dbxref=GeneID:7144531;gbkey=misc_feature
NC_011748.1	RefSeq	gene	1203654	1204550	.	+	.	ID=gene1161;Name=ycdT;Dbxref=GeneID:7148283;gbkey=Gene;gene=ycdT;locus_tag=EC55989_1140;pseudo=true
NC_011748.1	RefSeq	region	1203654	1204550	.	+	.	ID=id89;Note=fragment of  diguanylate cyclase %28part 2%29%3BEvidence 7 : Gene remnant%3B Product type pe :  enzyme;Dbxref=GeneID:7148283;gbkey=misc_feature
NC_011748.1	RefSeq	gene	1204591	1205457	.	-	.	ID=gene1162;Name=insF;Dbxref=GeneID:7148284;gbkey=Gene;gene=insF;locus_tag=EC55989_1141
NC_011748.1	RefSeq	CDS	1204591	1205457	.	-	0	ID=cds1087;Name=YP_002402231.1;Parent=gene1162;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402231.1,GeneID:7148284;gbkey=CDS;product=IS3 element protein InsF;protein_id=YP_002402231.1;transl_table=11
NC_011748.1	RefSeq	gene	1205454	1205762	.	-	.	ID=gene1163;Name=insE;Dbxref=GeneID:7146594;gbkey=Gene;gene=insE;locus_tag=EC55989_1142
NC_011748.1	RefSeq	CDS	1205454	1205762	.	-	0	ID=cds1088;Name=YP_002402232.1;Parent=gene1163;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402232.1,GeneID:7146594;gbkey=CDS;product=IS3 element protein InsE;protein_id=YP_002402232.1;transl_table=11
NC_011748.1	RefSeq	gene	1205856	1206347	.	+	.	ID=gene1164;Name=EC55989_1143;Dbxref=GeneID:7146592;gbkey=Gene;locus_tag=EC55989_1143
NC_011748.1	RefSeq	CDS	1205856	1206347	.	+	0	ID=cds1089;Name=YP_002402233.1;Parent=gene1164;Dbxref=Genbank:YP_002402233.1,GeneID:7146592;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402233.1;transl_table=11
NC_011748.1	RefSeq	gene	1206344	1207330	.	+	.	ID=gene1165;Name=ycdU;Dbxref=GeneID:7144532;gbkey=Gene;gene=ycdU;locus_tag=EC55989_1144
NC_011748.1	RefSeq	CDS	1206344	1207330	.	+	0	ID=cds1090;Name=YP_002402234.1;Parent=gene1165;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002402234.1,GeneID:7144532;gbkey=CDS;product=inner membrane protein;protein_id=YP_002402234.1;transl_table=11
NC_011748.1	RefSeq	gene	1207704	1207791	.	-	.	ID=gene1166;Name=EC55989_tRNA85;Dbxref=GeneID:7148285;gbkey=Gene;locus_tag=EC55989_tRNA85
NC_011748.1	RefSeq	tRNA	1207704	1207791	.	-	.	ID=rna50;Dbxref=GeneID:7148285;gbkey=tRNA;product=tRNA-Ser
NC_011748.1	RefSeq	exon	1207704	1207791	.	-	.	ID=id90;Parent=rna50;Dbxref=GeneID:7148285;gbkey=tRNA;product=tRNA-Ser
NC_011748.1	RefSeq	gene	1208025	1208963	.	+	.	ID=gene1167;Name=ycdW;Dbxref=GeneID:7145400;gbkey=Gene;gene=ycdW;locus_tag=EC55989_1146
NC_011748.1	RefSeq	CDS	1208025	1208963	.	+	0	ID=cds1091;Name=YP_002402235.1;Parent=gene1167;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 11237876%2C 10493123%3B Product type e : enzyme;Dbxref=Genbank:YP_002402235.1,GeneID:7145400;gbkey=CDS;product=2-ketoacid reductase;protein_id=YP_002402235.1;transl_table=11
NC_011748.1	RefSeq	gene	1209018	1209755	.	+	.	ID=gene1168;Name=ycdX;Dbxref=GeneID:7148286;gbkey=Gene;gene=ycdX;locus_tag=EC55989_1147
NC_011748.1	RefSeq	CDS	1209018	1209755	.	+	0	ID=cds1092;Name=YP_002402236.1;Parent=gene1168;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 12661000%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002402236.1,GeneID:7148286;gbkey=CDS;product=hydrolase;protein_id=YP_002402236.1;transl_table=11
NC_011748.1	RefSeq	gene	1209779	1210333	.	+	.	ID=gene1169;Name=ycdY;Dbxref=GeneID:7148287;gbkey=Gene;gene=ycdY;locus_tag=EC55989_1148
NC_011748.1	RefSeq	CDS	1209779	1210333	.	+	0	ID=cds1093;Name=YP_002402237.1;Parent=gene1169;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402237.1,GeneID:7148287;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402237.1;transl_table=11
NC_011748.1	RefSeq	gene	1210435	1210926	.	+	.	ID=gene1170;Name=ycdZ;Dbxref=GeneID:7148288;gbkey=Gene;gene=ycdZ;locus_tag=EC55989_1149
NC_011748.1	RefSeq	CDS	1210435	1210926	.	+	0	ID=cds1094;Name=YP_002402238.1;Parent=gene1170;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002402238.1,GeneID:7148288;gbkey=CDS;product=inner membrane protein;protein_id=YP_002402238.1;transl_table=11
NC_011748.1	RefSeq	gene	1210990	1211823	.	-	.	ID=gene1171;Name=csgG;Dbxref=GeneID:7148289;gbkey=Gene;gene=csgG;locus_tag=EC55989_1150
NC_011748.1	RefSeq	CDS	1210990	1211823	.	-	0	ID=cds1095;Name=YP_002402239.1;Parent=gene1171;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 8817489%3B Product type lp : lipoprotein;Dbxref=Genbank:YP_002402239.1,GeneID:7148289;gbkey=CDS;product=outer membrane lipoprotein involved in curli production assembly%2Ftransport;protein_id=YP_002402239.1;transl_table=11
NC_011748.1	RefSeq	gene	1211850	1212266	.	-	.	ID=gene1172;Name=csgF;Dbxref=GeneID:7145774;gbkey=Gene;gene=csgF;locus_tag=EC55989_1151
NC_011748.1	RefSeq	CDS	1211850	1212266	.	-	0	ID=cds1096;Name=YP_002402240.1;Parent=gene1172;Note=nucleator protein that participates in the polymerization of curlin %28CsgA%29 subunits into curli %28extracellular fibers from Escherichia and Salmonella spp. that are involved in the colonization of inert surfaces and biofilm formation%29%3B part of the curli secretion and assembly protein complex;Dbxref=Genbank:YP_002402240.1,GeneID:7145774;gbkey=CDS;product=curli assembly protein CsgF;protein_id=YP_002402240.1;transl_table=11
NC_011748.1	RefSeq	gene	1212291	1212680	.	-	.	ID=gene1173;Name=csgE;Dbxref=GeneID:7145773;gbkey=Gene;gene=csgE;locus_tag=EC55989_1152
NC_011748.1	RefSeq	CDS	1212291	1212680	.	-	0	ID=cds1097;Name=YP_002402241.1;Parent=gene1173;Note=chaperone-like protein that participates in the polymerization of curlin %28CsgA%29 subunits into curli %28extracellular fibers from Escherichia and Salmonella spp. that are involved in the colonization of inert surfaces and biofilm formation%29%3B part of the curli secretion and assembly protein complex;Dbxref=Genbank:YP_002402241.1,GeneID:7145773;gbkey=CDS;product=curli assembly protein CsgE;protein_id=YP_002402241.1;transl_table=11
NC_011748.1	RefSeq	gene	1212685	1213335	.	-	.	ID=gene1174;Name=csgD;Dbxref=GeneID:7145772;gbkey=Gene;gene=csgD;locus_tag=EC55989_1153
NC_011748.1	RefSeq	CDS	1212685	1213335	.	-	0	ID=cds1098;Name=YP_002402242.1;Parent=gene1174;Note=activates the csgBA and csgDEFG operons involved in biofilm formation;Dbxref=Genbank:YP_002402242.1,GeneID:7145772;gbkey=CDS;product=DNA-binding transcriptional regulator CsgD;protein_id=YP_002402242.1;transl_table=11
NC_011748.1	RefSeq	gene	1214089	1214544	.	+	.	ID=gene1175;Name=csgB;Dbxref=GeneID:7145771;gbkey=Gene;gene=csgB;locus_tag=EC55989_1154
NC_011748.1	RefSeq	CDS	1214089	1214544	.	+	0	ID=cds1099;Name=YP_002402243.1;Parent=gene1175;Note=CsgB%3B functions as a nucleator in the assembly of curli %28coiled surface structures%29 on the cell surface;Dbxref=Genbank:YP_002402243.1,GeneID:7145771;gbkey=CDS;product=curlin minor subunit;protein_id=YP_002402243.1;transl_table=11
NC_011748.1	RefSeq	gene	1214585	1215040	.	+	.	ID=gene1176;Name=csgA;Dbxref=GeneID:7145769;gbkey=Gene;gene=csgA;locus_tag=EC55989_1155
NC_011748.1	RefSeq	CDS	1214585	1215040	.	+	0	ID=cds1100;Name=YP_002402244.1;Parent=gene1176;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 89201357%2C 93023873%2C 1677357%2C 8459772%2C 8817489%2C 1357528%3B Product type s : structure;Dbxref=Genbank:YP_002402244.1,GeneID:7145769;gbkey=CDS;product=cryptic curlin major subunit;protein_id=YP_002402244.1;transl_table=11
NC_011748.1	RefSeq	gene	1215099	1215431	.	+	.	ID=gene1177;Name=csgC;Dbxref=GeneID:7145768;gbkey=Gene;gene=csgC;locus_tag=EC55989_1156
NC_011748.1	RefSeq	CDS	1215099	1215431	.	+	0	ID=cds1101;Name=YP_002402245.1;Parent=gene1177;Note=involved in autoagglutination of curliated cells%3B not involved in production of curli fibers;Dbxref=Genbank:YP_002402245.1,GeneID:7145768;gbkey=CDS;product=autoagglutination protein;protein_id=YP_002402245.1;transl_table=11
NC_011748.1	RefSeq	gene	1215662	1215862	.	+	.	ID=gene1178;Name=ymdA;Dbxref=GeneID:7145770;gbkey=Gene;gene=ymdA;locus_tag=EC55989_1157;pseudo=true
NC_011748.1	RefSeq	region	1215662	1215862	.	+	.	ID=id91;Note=fragment of conserved hypothetical protein %28partial%29%3BEvidence 7 : Gene remnant;Dbxref=GeneID:7145770;gbkey=misc_feature
NC_011748.1	RefSeq	gene	1215957	1216490	.	+	.	ID=gene1179;Name=ymdB;Dbxref=GeneID:7149268;gbkey=Gene;gene=ymdB;locus_tag=EC55989_1158
NC_011748.1	RefSeq	CDS	1215957	1216490	.	+	0	ID=cds1102;Name=YP_002402246.1;Parent=gene1179;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402246.1,GeneID:7149268;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402246.1;transl_table=11
NC_011748.1	RefSeq	gene	1216492	1217913	.	+	.	ID=gene1180;Name=ymdC;Dbxref=GeneID:7149269;gbkey=Gene;gene=ymdC;locus_tag=EC55989_1159
NC_011748.1	RefSeq	CDS	1216492	1217913	.	+	0	ID=cds1103;Name=YP_002402247.1;Parent=gene1180;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002402247.1,GeneID:7149269;gbkey=CDS;product=hydrolase;protein_id=YP_002402247.1;transl_table=11
NC_011748.1	RefSeq	gene	1217921	1219078	.	-	.	ID=gene1181;Name=mdoC;Dbxref=GeneID:7149270;gbkey=Gene;gene=mdoC;locus_tag=EC55989_1160
NC_011748.1	RefSeq	CDS	1217921	1219078	.	-	0	ID=cds1104;Name=YP_002402248.1;Parent=gene1181;Note=required for the transfer of succinyl residues to the glucan backbone;Dbxref=Genbank:YP_002402248.1,GeneID:7149270;gbkey=CDS;product=glucans biosynthesis protein;protein_id=YP_002402248.1;transl_table=11
NC_011748.1	RefSeq	gene	1219123	1219266	.	-	.	ID=gene1182;Name=EC55989_1161;Dbxref=GeneID:7146798;gbkey=Gene;locus_tag=EC55989_1161
NC_011748.1	RefSeq	CDS	1219123	1219266	.	-	0	ID=cds1105;Name=YP_002402249.1;Parent=gene1182;Note=Evidence 6 : Doubtful CDS;Dbxref=Genbank:YP_002402249.1,GeneID:7146798;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402249.1;transl_table=11
NC_011748.1	RefSeq	gene	1219270	1219428	.	-	.	ID=gene1183;Name=EC55989_1162;Dbxref=GeneID:7144533;gbkey=Gene;locus_tag=EC55989_1162
NC_011748.1	RefSeq	CDS	1219270	1219428	.	-	0	ID=cds1106;Name=YP_002402250.1;Parent=gene1183;Note=Evidence 6 : Doubtful CDS;Dbxref=Genbank:YP_002402250.1,GeneID:7144533;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402250.1;transl_table=11
NC_011748.1	RefSeq	gene	1219472	1221007	.	+	.	ID=gene1184;Name=mdoG;Dbxref=GeneID:7144534;gbkey=Gene;gene=mdoG;locus_tag=EC55989_1163
NC_011748.1	RefSeq	CDS	1219472	1221007	.	+	0	ID=cds1107;Name=YP_002402251.1;Parent=gene1184;Note=involved in the biosynthesis of osmoregulated periplasmic glucans%3B required for the assembly of the polyglucose structure of glucan;Dbxref=Genbank:YP_002402251.1,GeneID:7144534;gbkey=CDS;product=glucan biosynthesis protein G;protein_id=YP_002402251.1;transl_table=11
NC_011748.1	RefSeq	gene	1221000	1223543	.	+	.	ID=gene1185;Name=mdoH;Dbxref=GeneID:7146800;gbkey=Gene;gene=mdoH;locus_tag=EC55989_1164
NC_011748.1	RefSeq	CDS	1221000	1223543	.	+	0	ID=cds1108;Name=YP_002402252.1;Parent=gene1185;Note=necessary for biosynthesis of osmoregulated periplasmic glucans possibly involved in the transfer to the periplasmic space;Dbxref=Genbank:YP_002402252.1,GeneID:7146800;gbkey=CDS;product=glucosyltransferase MdoH;protein_id=YP_002402252.1;transl_table=11
NC_011748.1	RefSeq	gene	1223716	1223943	.	+	.	ID=gene1186;Name=yceK;Dbxref=GeneID:7146801;gbkey=Gene;gene=yceK;locus_tag=EC55989_1165
NC_011748.1	RefSeq	CDS	1223716	1223943	.	+	0	ID=cds1109;Name=YP_002402253.1;Parent=gene1186;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type lp : lipoprotein;Dbxref=Genbank:YP_002402253.1,GeneID:7146801;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402253.1;transl_table=11
NC_011748.1	RefSeq	gene	1223944	1224318	.	-	.	ID=gene1187;Name=msyB;Dbxref=GeneID:7148298;gbkey=Gene;gene=msyB;locus_tag=EC55989_1166
NC_011748.1	RefSeq	CDS	1223944	1224318	.	-	0	ID=cds1110;Name=YP_002402254.1;Parent=gene1187;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 92165719;Dbxref=Genbank:YP_002402254.1,GeneID:7148298;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402254.1;transl_table=11
NC_011748.1	RefSeq	gene	1224401	1225627	.	-	.	ID=gene1188;Name=mdtG;Dbxref=GeneID:7146912;gbkey=Gene;gene=mdtG;locus_tag=EC55989_1167
NC_011748.1	RefSeq	CDS	1224401	1225627	.	-	0	ID=cds1111;Name=YP_002402255.1;Parent=gene1188;Note=Confers resistance to fosfomycin and deoxycholate;Dbxref=Genbank:YP_002402255.1,GeneID:7146912;gbkey=CDS;product=drug efflux system protein MdtG;protein_id=YP_002402255.1;transl_table=11
NC_011748.1	RefSeq	gene	1225799	1226719	.	-	.	ID=gene1189;Name=lpxL;Dbxref=GeneID:7146808;gbkey=Gene;gene=lpxL;locus_tag=EC55989_1168
NC_011748.1	RefSeq	CDS	1225799	1226719	.	-	0	ID=cds1112;Name=YP_002402256.1;Parent=gene1189;Note=Acylates the intermediate %28KDO%292-lipid IVA to form %28KDO%292-%28lauroyl%29-lipid IVA;Dbxref=Genbank:YP_002402256.1,GeneID:7146808;gbkey=CDS;product=lipid A biosynthesis lauroyl acyltransferase;protein_id=YP_002402256.1;transl_table=11
NC_011748.1	RefSeq	gene	1226944	1227996	.	+	.	ID=gene1190;Name=yceA;Dbxref=GeneID:7146741;gbkey=Gene;gene=yceA;locus_tag=EC55989_1169
NC_011748.1	RefSeq	CDS	1226944	1227996	.	+	0	ID=cds1113;Name=YP_002402257.1;Parent=gene1190;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 1840644;Dbxref=Genbank:YP_002402257.1,GeneID:7146741;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402257.1;transl_table=11
NC_011748.1	RefSeq	gene	1228038	1228613	.	-	.	ID=gene1191;Name=yceI;Dbxref=GeneID:7148290;gbkey=Gene;gene=yceI;locus_tag=EC55989_1170
NC_011748.1	RefSeq	CDS	1228038	1228613	.	-	0	ID=cds1114;Name=YP_002402258.1;Parent=gene1191;Note=Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism%3B PubMedId : 15741337%2C 11298273%2C 1840644%2C 9298646%3B Product type c : carrier;Dbxref=Genbank:YP_002402258.1,GeneID:7148290;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402258.1;transl_table=11
NC_011748.1	RefSeq	gene	1228617	1229183	.	-	.	ID=gene1192;Name=yceJ;Dbxref=GeneID:7148296;gbkey=Gene;gene=yceJ;locus_tag=EC55989_1171
NC_011748.1	RefSeq	CDS	1228617	1229183	.	-	0	ID=cds1115;Name=YP_002402259.1;Parent=gene1192;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pc :  carrier;Dbxref=Genbank:YP_002402259.1,GeneID:7148296;gbkey=CDS;product=cytochrome b561;protein_id=YP_002402259.1;transl_table=11
NC_011748.1	RefSeq	gene	1229605	1230723	.	-	.	ID=gene1193;Name=solA;Dbxref=GeneID:7148297;gbkey=Gene;gene=solA;locus_tag=EC55989_1172
NC_011748.1	RefSeq	CDS	1229605	1230723	.	-	0	ID=cds1116;Name=YP_002402260.1;Parent=gene1193;Note=catalyzes the demethylation of N-methyl-L-tryptophan forming L-tryptophan and formaldehyde%3B FAD-binding%3B can also catalyze the demethylation of other N-methyl amino acids;Dbxref=Genbank:YP_002402260.1,GeneID:7148297;gbkey=CDS;product=N-methyltryptophan oxidase;protein_id=YP_002402260.1;transl_table=11
NC_011748.1	RefSeq	gene	1230838	1231092	.	-	.	ID=gene1194;Name=bssS;Dbxref=GeneID:7147678;gbkey=Gene;gene=bssS;locus_tag=EC55989_1173
NC_011748.1	RefSeq	CDS	1230838	1231092	.	-	0	ID=cds1117;Name=YP_002402261.1;Parent=gene1194;Note=BssS%3B regulator of biofilm through signal secretion%3B disruption of this gene in Escherichia coli led to effects on biofilm formation%2C alteration in expression of a number of genes and mutations in bssS led to defects in indole transport and autoinducer-2 uptake and processing;Dbxref=Genbank:YP_002402261.1,GeneID:7147678;gbkey=CDS;product=biofilm formation regulatory protein BssS;protein_id=YP_002402261.1;transl_table=11
NC_011748.1	RefSeq	gene	1231382	1231627	.	-	.	ID=gene1195;Name=dinI;Dbxref=GeneID:7145638;gbkey=Gene;gene=dinI;locus_tag=EC55989_1174
NC_011748.1	RefSeq	CDS	1231382	1231627	.	-	0	ID=cds1118;Name=YP_002402262.2;Parent=gene1195;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 11230150%2C 11152126%3B Product type f : factor;Dbxref=Genbank:YP_002402262.2,GeneID:7145638;gbkey=CDS;product=DNA damage-inducible protein I;protein_id=YP_002402262.2;transl_table=11
NC_011748.1	RefSeq	gene	1231701	1232747	.	-	.	ID=gene1196;Name=pyrC;Dbxref=GeneID:7145918;gbkey=Gene;gene=pyrC;locus_tag=EC55989_1175
NC_011748.1	RefSeq	CDS	1231701	1232747	.	-	0	ID=cds1119;Name=YP_002402263.1;Parent=gene1196;Note=catalyzes the formation of N-carbamoyl-L-aspartate from %28S%29-dihydroorotate in pyrimidine biosynthesis;Dbxref=Genbank:YP_002402263.1,GeneID:7145918;gbkey=CDS;product=dihydroorotase;protein_id=YP_002402263.1;transl_table=11
NC_011748.1	RefSeq	gene	1232853	1233413	.	-	.	ID=gene1197;Name=yceB;Dbxref=GeneID:7147318;gbkey=Gene;gene=yceB;locus_tag=EC55989_1176
NC_011748.1	RefSeq	CDS	1232853	1233413	.	-	0	ID=cds1120;Name=YP_002402264.1;Parent=gene1197;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type lp : lipoprotein;Dbxref=Genbank:YP_002402264.1,GeneID:7147318;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402264.1;transl_table=11
NC_011748.1	RefSeq	gene	1233547	1234194	.	-	.	ID=gene1198;Name=grxB;Dbxref=GeneID:7148291;gbkey=Gene;gene=grxB;locus_tag=EC55989_1177
NC_011748.1	RefSeq	CDS	1233547	1234194	.	-	0	ID=cds1121;Name=YP_002402265.1;Parent=gene1198;Note=cofactor involved in the reduction of disulfides;Dbxref=Genbank:YP_002402265.1,GeneID:7148291;gbkey=CDS;product=glutaredoxin;protein_id=YP_002402265.1;transl_table=11
NC_011748.1	RefSeq	gene	1234258	1235466	.	-	.	ID=gene1199;Name=mdtH;Dbxref=GeneID:7146371;gbkey=Gene;gene=mdtH;locus_tag=EC55989_1178
NC_011748.1	RefSeq	CDS	1234258	1235466	.	-	0	ID=cds1122;Name=YP_002402266.1;Parent=gene1199;Note=Confers resistance to norfloxacin and enoxacin;Dbxref=Genbank:YP_002402266.1,GeneID:7146371;gbkey=CDS;product=multidrug resistance protein MdtH;protein_id=YP_002402266.1;transl_table=11
NC_011748.1	RefSeq	gene	1235702	1236286	.	+	.	ID=gene1200;Name=rimJ;Dbxref=GeneID:7146809;gbkey=Gene;gene=rimJ;locus_tag=EC55989_1179
NC_011748.1	RefSeq	CDS	1235702	1236286	.	+	0	ID=cds1123;Name=YP_002402267.1;Parent=gene1200;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 88121676%2C 90136529%2C 1356970%3B Product type e : enzyme;Dbxref=Genbank:YP_002402267.1,GeneID:7146809;gbkey=CDS;product=ribosomal-protein-S5-alanine N-acetyltransferase;protein_id=YP_002402267.1;transl_table=11
NC_011748.1	RefSeq	gene	1236297	1236944	.	+	.	ID=gene1201;Name=yceH;Dbxref=GeneID:7147419;gbkey=Gene;gene=yceH;locus_tag=EC55989_1180
NC_011748.1	RefSeq	CDS	1236297	1236944	.	+	0	ID=cds1124;Name=YP_002402268.1;Parent=gene1201;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 1356970%2C 2828880;Dbxref=Genbank:YP_002402268.1,GeneID:7147419;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402268.1;transl_table=11
NC_011748.1	RefSeq	gene	1236946	1237869	.	+	.	ID=gene1202;Name=mviM;Dbxref=GeneID:7148295;gbkey=Gene;gene=mviM;locus_tag=EC55989_1181
NC_011748.1	RefSeq	CDS	1236946	1237869	.	+	0	ID=cds1125;Name=YP_002402269.1;Parent=gene1202;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002402269.1,GeneID:7148295;gbkey=CDS;product=oxidoreductase with NAD%28P%29-binding Rossmann-fold domain;protein_id=YP_002402269.1;transl_table=11
NC_011748.1	RefSeq	gene	1237979	1239514	.	+	.	ID=gene1203;Name=mviN;Dbxref=GeneID:7146937;gbkey=Gene;gene=mviN;locus_tag=EC55989_1182
NC_011748.1	RefSeq	CDS	1237979	1239514	.	+	0	ID=cds1126;Name=YP_002402270.1;Parent=gene1203;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002402270.1,GeneID:7146937;gbkey=CDS;product=inner membrane protein;protein_id=YP_002402270.1;transl_table=11
NC_011748.1	RefSeq	STS	1238718	1238905	.	+	.	ID=id92;Dbxref=UniSTS:60938,GeneID:7146937;gbkey=STS
NC_011748.1	RefSeq	gene	1239554	1239970	.	-	.	ID=gene1204;Name=flgN;Dbxref=GeneID:7146938;gbkey=Gene;gene=flgN;locus_tag=EC55989_1183
NC_011748.1	RefSeq	CDS	1239554	1239970	.	-	0	ID=cds1127;Name=YP_002402271.1;Parent=gene1204;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 10320579%3B Product type f : factor;Dbxref=Genbank:YP_002402271.1,GeneID:7146938;gbkey=CDS;product=export chaperone for FlgK and FlgL;protein_id=YP_002402271.1;transl_table=11
NC_011748.1	RefSeq	gene	1239975	1240268	.	-	.	ID=gene1205;Name=flgM;Dbxref=GeneID:7146137;gbkey=Gene;gene=flgM;locus_tag=EC55989_1184
NC_011748.1	RefSeq	CDS	1239975	1240268	.	-	0	ID=cds1128;Name=YP_002402272.1;Parent=gene1205;Note=regulates the flagellar specific sigma28 transcription factor;Dbxref=Genbank:YP_002402272.1,GeneID:7146137;gbkey=CDS;product=anti-sigma-28 factor FlgM;protein_id=YP_002402272.1;transl_table=11
NC_011748.1	RefSeq	gene	1240344	1241003	.	-	.	ID=gene1206;Name=flgA;Dbxref=GeneID:7146136;gbkey=Gene;gene=flgA;locus_tag=EC55989_1185
NC_011748.1	RefSeq	CDS	1240344	1241003	.	-	0	ID=cds1129;Name=YP_002402273.1;Parent=gene1206;Note=required for the assembly of the flagellar basal body P-ring;Dbxref=Genbank:YP_002402273.1,GeneID:7146136;gbkey=CDS;product=flagellar basal body P-ring biosynthesis protein FlgA;protein_id=YP_002402273.1;transl_table=11
NC_011748.1	RefSeq	gene	1241158	1241574	.	+	.	ID=gene1207;Name=flgB;Dbxref=GeneID:7146124;gbkey=Gene;gene=flgB;locus_tag=EC55989_1186
NC_011748.1	RefSeq	CDS	1241158	1241574	.	+	0	ID=cds1130;Name=YP_002402274.1;Parent=gene1207;Note=with FlgF and C makes up the proximal portion of the flagellar basal body rod%3B Vibrio parahaemolyticus protein is associated with the polar flagella;Dbxref=Genbank:YP_002402274.1,GeneID:7146124;gbkey=CDS;product=flagellar basal-body rod protein FlgB;protein_id=YP_002402274.1;transl_table=11
NC_011748.1	RefSeq	gene	1241578	1241982	.	+	.	ID=gene1208;Name=flgC;Dbxref=GeneID:7146125;gbkey=Gene;gene=flgC;locus_tag=EC55989_1187
NC_011748.1	RefSeq	CDS	1241578	1241982	.	+	0	ID=cds1131;Name=YP_002402275.1;Parent=gene1208;Note=with FlgF and B makes up the proximal portion of the flagellar basal body rod;Dbxref=Genbank:YP_002402275.1,GeneID:7146125;gbkey=CDS;product=flagellar basal body rod protein FlgC;protein_id=YP_002402275.1;transl_table=11
NC_011748.1	RefSeq	gene	1241994	1242689	.	+	.	ID=gene1209;Name=flgD;Dbxref=GeneID:7146126;gbkey=Gene;gene=flgD;locus_tag=EC55989_1188
NC_011748.1	RefSeq	CDS	1241994	1242689	.	+	0	ID=cds1132;Name=YP_002402276.1;Parent=gene1209;Note=acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod%3B Yersinia%2C Vibrio parahaemolyticus%2C Bradyrhizobium and other organisms have 2 copies of some flagellar genes%3B in V. parahaemolyticus one set used for lateral flagella production and the other is used for the polar flagella production;Dbxref=Genbank:YP_002402276.1,GeneID:7146126;gbkey=CDS;product=flagellar basal body rod modification protein;protein_id=YP_002402276.1;transl_table=11
NC_011748.1	RefSeq	gene	1242714	1243919	.	+	.	ID=gene1210;Name=flgE;Dbxref=GeneID:7146127;gbkey=Gene;gene=flgE;locus_tag=EC55989_1189
NC_011748.1	RefSeq	CDS	1242714	1243919	.	+	0	ID=cds1133;Name=YP_002402277.1;Parent=gene1210;Note=the hook connects flagellar basal body to the flagellar filament;Dbxref=Genbank:YP_002402277.1,GeneID:7146127;gbkey=CDS;product=flagellar hook protein FlgE;protein_id=YP_002402277.1;transl_table=11
NC_011748.1	RefSeq	gene	1243939	1244694	.	+	.	ID=gene1211;Name=flgF;Dbxref=GeneID:7146128;gbkey=Gene;gene=flgF;locus_tag=EC55989_1190
NC_011748.1	RefSeq	CDS	1243939	1244694	.	+	0	ID=cds1134;Name=YP_002402278.1;Parent=gene1211;Note=FlgF%2C with FlgB and C%2C makes up the proximal portion of the flagellar basal body rod;Dbxref=Genbank:YP_002402278.1,GeneID:7146128;gbkey=CDS;product=flagellar basal body rod protein FlgF;protein_id=YP_002402278.1;transl_table=11
NC_011748.1	RefSeq	gene	1244866	1245648	.	+	.	ID=gene1212;Name=flgG;Dbxref=GeneID:7146129;gbkey=Gene;gene=flgG;locus_tag=EC55989_1191
NC_011748.1	RefSeq	CDS	1244866	1245648	.	+	0	ID=cds1135;Name=YP_002402279.1;Parent=gene1212;Note=makes up the distal portion of the flagellar basal body rod;Dbxref=Genbank:YP_002402279.1,GeneID:7146129;gbkey=CDS;product=flagellar basal body rod protein FlgG;protein_id=YP_002402279.1;transl_table=11
NC_011748.1	RefSeq	gene	1245701	1246399	.	+	.	ID=gene1213;Name=flgH;Dbxref=GeneID:7146130;gbkey=Gene;gene=flgH;locus_tag=EC55989_1192
NC_011748.1	RefSeq	CDS	1245701	1246399	.	+	0	ID=cds1136;Name=YP_002402280.1;Parent=gene1213;Note=part of the flagellar basal body which consists of four rings L%2CP%2C S and M mounted on a central rod;Dbxref=Genbank:YP_002402280.1,GeneID:7146130;gbkey=CDS;product=flagellar basal body L-ring protein;protein_id=YP_002402280.1;transl_table=11
NC_011748.1	RefSeq	gene	1246411	1247508	.	+	.	ID=gene1214;Name=flgI;Dbxref=GeneID:7146131;gbkey=Gene;gene=flgI;locus_tag=EC55989_1193
NC_011748.1	RefSeq	CDS	1246411	1247508	.	+	0	ID=cds1137;Name=YP_002402281.1;Parent=gene1214;Note=part of the basal body which consists of four rings L%2C P%2C S%2C and M mounted on a central rod%3B Vibrio parahaemolyticus%2C Yersinia%2C Bradyrhizobium and other bacteria have two copies of this and other flagellar genes%3B the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum;Dbxref=Genbank:YP_002402281.1,GeneID:7146131;gbkey=CDS;product=flagellar basal body P-ring protein;protein_id=YP_002402281.1;transl_table=11
NC_011748.1	RefSeq	gene	1247508	1248449	.	+	.	ID=gene1215;Name=flgJ;Dbxref=GeneID:7146132;gbkey=Gene;gene=flgJ;locus_tag=EC55989_1194
NC_011748.1	RefSeq	CDS	1247508	1248449	.	+	0	ID=cds1138;Name=YP_002402282.1;Parent=gene1215;Note=Flagellum-specific muramidase which hydrolyzes the peptidoglycan layer to assemble the rod structure in the periplasmic space;Dbxref=Genbank:YP_002402282.1,GeneID:7146132;gbkey=CDS;product=flagellar rod assembly protein%2Fmuramidase FlgJ;protein_id=YP_002402282.1;transl_table=11
NC_011748.1	RefSeq	gene	1248515	1250158	.	+	.	ID=gene1216;Name=flgK;Dbxref=GeneID:7146133;gbkey=Gene;gene=flgK;locus_tag=EC55989_1195
NC_011748.1	RefSeq	CDS	1248515	1250158	.	+	0	ID=cds1139;Name=YP_002402283.1;Parent=gene1216;Note=with FlgL acts as a hook filament junction protein to join the flagellar filament to the hook;Dbxref=Genbank:YP_002402283.1,GeneID:7146133;gbkey=CDS;product=flagellar hook-associated protein FlgK;protein_id=YP_002402283.1;transl_table=11
NC_011748.1	RefSeq	gene	1250170	1251123	.	+	.	ID=gene1217;Name=flgL;Dbxref=GeneID:7146134;gbkey=Gene;gene=flgL;locus_tag=EC55989_1196
NC_011748.1	RefSeq	CDS	1250170	1251123	.	+	0	ID=cds1140;Name=YP_002402284.1;Parent=gene1217;Note=with FlgK acts as a hook filament junction protein to join the flagellar filament to the hook%3B Yersinia%2C Vibrio parahaemolyticus%2C Bradyrhizobium and other organisms have 2 copies of this and other flagellar genes;Dbxref=Genbank:YP_002402284.1,GeneID:7146134;gbkey=CDS;product=flagellar hook-associated protein FlgL;protein_id=YP_002402284.1;transl_table=11
NC_011748.1	RefSeq	gene	1251320	1254505	.	-	.	ID=gene1218;Name=rne;Dbxref=GeneID:7146135;gbkey=Gene;gene=rne;locus_tag=EC55989_1197
NC_011748.1	RefSeq	CDS	1251320	1254505	.	-	0	ID=cds1141;Name=YP_002402285.1;Parent=gene1218;Note=bifunctional ribonuclease E%2Fendoribonuclease%2FRNA-binding protein%2FRNA degradosome binding protein%3B forms part of the membrane-associated degradosome complex along with PNPase%2C RhlB%2C and enolase;Dbxref=Genbank:YP_002402285.1,GeneID:7146135;gbkey=CDS;product=ribonuclease E;protein_id=YP_002402285.1;transl_table=11
NC_011748.1	RefSeq	gene	1254530	1254866	.	-	.	ID=gene1219;Name=EC55989_misc_RNA_22;Dbxref=GeneID:7147448;gbkey=Gene;locus_tag=EC55989_misc_RNA_22
NC_011748.1	RefSeq	transcript	1254530	1254866	.	-	.	ID=rna51;Parent=gene1219;Dbxref=GeneID:7147448;gbkey=misc_RNA;product=rne5
NC_011748.1	RefSeq	exon	1254530	1254866	.	-	.	ID=id93;Parent=rna51;Dbxref=GeneID:7147448;gbkey=misc_RNA;product=rne5
NC_011748.1	RefSeq	gene	1255078	1256037	.	+	.	ID=gene1220;Name=rluC;Dbxref=GeneID:7145302;gbkey=Gene;gene=rluC;locus_tag=EC55989_1198
NC_011748.1	RefSeq	CDS	1255078	1256037	.	+	0	ID=cds1142;Name=YP_002402286.1;Parent=gene1220;Note=catalyzes the transformation of uracil to pseudouracil at nucleotides U955%2C U2504%2C and U2580 in 23S rRNA;Dbxref=Genbank:YP_002402286.1,GeneID:7145302;gbkey=CDS;product=23S rRNA pseudouridylate synthase C;protein_id=YP_002402286.1;transl_table=11
NC_011748.1	RefSeq	gene	1256149	1256733	.	-	.	ID=gene1221;Name=yceF;Dbxref=GeneID:7147428;gbkey=Gene;gene=yceF;locus_tag=EC55989_1199
NC_011748.1	RefSeq	CDS	1256149	1256733	.	-	0	ID=cds1143;Name=YP_002402287.1;Parent=gene1221;Note=Maf%3B overexpression in Bacillus subtilis inhibits septation in the dividing cell;Dbxref=Genbank:YP_002402287.1,GeneID:7147428;gbkey=CDS;product=Maf-like protein;protein_id=YP_002402287.1;transl_table=11
NC_011748.1	RefSeq	gene	1256727	1256895	.	+	.	ID=gene1222;Name=sraB;Dbxref=GeneID:7148293;gbkey=Gene;gene=sraB;locus_tag=EC55989_misc_RNA_23
NC_011748.1	RefSeq	transcript	1256727	1256895	.	+	.	ID=rna52;Parent=gene1222;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 11445539%3B Product type n : RNA;Dbxref=GeneID:7148293;gbkey=misc_RNA;product=SraB
NC_011748.1	RefSeq	exon	1256727	1256895	.	+	.	ID=id94;Parent=rna52;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 11445539%3B Product type n : RNA;Dbxref=GeneID:7148293;gbkey=misc_RNA;product=SraB
NC_011748.1	RefSeq	gene	1256932	1257453	.	+	.	ID=gene1223;Name=yceD;Dbxref=GeneID:7147699;gbkey=Gene;gene=yceD;locus_tag=EC55989_1200
NC_011748.1	RefSeq	CDS	1256932	1257453	.	+	0	ID=cds1144;Name=YP_002402288.1;Parent=gene1223;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 90008815%2C 1447160;Dbxref=Genbank:YP_002402288.1,GeneID:7147699;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402288.1;transl_table=11
NC_011748.1	RefSeq	gene	1257505	1257678	.	+	.	ID=gene1224;Name=rpmF;Dbxref=GeneID:7148292;gbkey=Gene;gene=rpmF;locus_tag=EC55989_1201
NC_011748.1	RefSeq	CDS	1257505	1257678	.	+	0	ID=cds1145;Name=YP_002402289.1;Parent=gene1224;Note=some L32 proteins have zinc finger motifs consisting of CXXC while others do not;Dbxref=Genbank:YP_002402289.1,GeneID:7148292;gbkey=CDS;product=50S ribosomal protein L32;protein_id=YP_002402289.1;transl_table=11
NC_011748.1	RefSeq	gene	1257759	1258829	.	+	.	ID=gene1225;Name=plsX;Dbxref=GeneID:7147491;gbkey=Gene;gene=plsX;locus_tag=EC55989_1202
NC_011748.1	RefSeq	CDS	1257759	1258829	.	+	0	ID=cds1146;Name=YP_002402290.1;Parent=gene1225;Note=involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis%3B functions with PlsY;Dbxref=Genbank:YP_002402290.1,GeneID:7147491;gbkey=CDS;product=glycerol-3-phosphate acyltransferase PlsX;protein_id=YP_002402290.1;transl_table=11
NC_011748.1	RefSeq	gene	1258897	1259850	.	+	.	ID=gene1226;Name=fabH;Dbxref=GeneID:7147197;gbkey=Gene;gene=fabH;locus_tag=EC55989_1203
NC_011748.1	RefSeq	CDS	1258897	1259850	.	+	0	ID=cds1147;Name=YP_002402291.1;Parent=gene1226;Note=FabH%3B beta-ketoacyl-acyl carrier protein synthase III%3B catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation%3B differs from 3-oxoacyl-%28acyl carrier protein%29 synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs;Dbxref=Genbank:YP_002402291.1,GeneID:7147197;gbkey=CDS;product=3-oxoacyl-ACP synthase;protein_id=YP_002402291.1;transl_table=11
NC_011748.1	RefSeq	gene	1259866	1260795	.	+	.	ID=gene1227;Name=fabD;Dbxref=GeneID:7146051;gbkey=Gene;gene=fabD;locus_tag=EC55989_1204
NC_011748.1	RefSeq	CDS	1259866	1260795	.	+	0	ID=cds1148;Name=YP_002402292.1;Parent=gene1227;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 92052166%2C 92183950%2C 92210530%2C 92234941%2C 7700236%2C 7768883%2C 9298646%3B Product type e : enzyme;Dbxref=Genbank:YP_002402292.1,GeneID:7146051;gbkey=CDS;product=malonyl-CoA-%5Bacyl-carrier-protein%5D transacylase;protein_id=YP_002402292.1;transl_table=11
NC_011748.1	RefSeq	gene	1260808	1261542	.	+	.	ID=gene1228;Name=fabG;Dbxref=GeneID:7146048;gbkey=Gene;gene=fabG;locus_tag=EC55989_1205
NC_011748.1	RefSeq	CDS	1260808	1261542	.	+	0	ID=cds1149;Name=YP_002402293.1;Parent=gene1228;Note=catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis;Dbxref=Genbank:YP_002402293.1,GeneID:7146048;gbkey=CDS;product=3-ketoacyl-ACP reductase;protein_id=YP_002402293.1;transl_table=11
NC_011748.1	RefSeq	gene	1261753	1261989	.	+	.	ID=gene1229;Name=acpP;Dbxref=GeneID:7146050;gbkey=Gene;gene=acpP;locus_tag=EC55989_1206
NC_011748.1	RefSeq	CDS	1261753	1261989	.	+	0	ID=cds1150;Name=YP_002402294.1;Parent=gene1229;Note=carries the fatty acid chain in fatty acid biosynthesis;Dbxref=Genbank:YP_002402294.1,GeneID:7146050;gbkey=CDS;product=acyl carrier protein;protein_id=YP_002402294.1;transl_table=11
NC_011748.1	RefSeq	gene	1262077	1263318	.	+	.	ID=gene1230;Name=fabF;Dbxref=GeneID:7145441;gbkey=Gene;gene=fabF;locus_tag=EC55989_1207
NC_011748.1	RefSeq	CDS	1262077	1263318	.	+	0	ID=cds1151;Name=YP_002402295.1;Parent=gene1230;Note=FabF%3B beta-ketoacyl-ACP synthase II%2C KASII%3B catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP%3B required for the elongation of short-chain unsaturated acyl-ACP;Dbxref=Genbank:YP_002402295.1,GeneID:7145441;gbkey=CDS;product=3-oxoacyl-ACP synthase;protein_id=YP_002402295.1;transl_table=11
NC_011748.1	RefSeq	gene	1263438	1264247	.	+	.	ID=gene1231;Name=pabC;Dbxref=GeneID:7146049;gbkey=Gene;gene=pabC;locus_tag=EC55989_1208
NC_011748.1	RefSeq	CDS	1263438	1264247	.	+	0	ID=cds1152;Name=YP_002402296.1;Parent=gene1231;Note=catalyzes the formation of 4-aminobenzoate and pyruvate from 4-amino-4-deoxychorismate;Dbxref=Genbank:YP_002402296.1,GeneID:7146049;gbkey=CDS;product=4-amino-4-deoxychorismate lyase;protein_id=YP_002402296.1;transl_table=11
NC_011748.1	RefSeq	gene	1264250	1265272	.	+	.	ID=gene1232;Name=yceG;Dbxref=GeneID:7147108;gbkey=Gene;gene=yceG;locus_tag=EC55989_1209
NC_011748.1	RefSeq	CDS	1264250	1265272	.	+	0	ID=cds1153;Name=YP_002402297.1;Parent=gene1232;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002402297.1,GeneID:7147108;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402297.1;transl_table=11
NC_011748.1	RefSeq	gene	1265262	1265903	.	+	.	ID=gene1233;Name=tmk;Dbxref=GeneID:7148294;gbkey=Gene;gene=tmk;locus_tag=EC55989_1210
NC_011748.1	RefSeq	CDS	1265262	1265903	.	+	0	ID=cds1154;Name=YP_002402298.1;Parent=gene1233;Note=catalyzes the reversible phosphoryl transfer from adenosine triphosphate %28ATP%29 to thymidine monophosphate %28dTMP%29 to form thymidine diphosphate %28dTDP%29;Dbxref=Genbank:YP_002402298.1,GeneID:7148294;gbkey=CDS;product=thymidylate kinase;protein_id=YP_002402298.1;transl_table=11
NC_011748.1	RefSeq	gene	1265900	1266904	.	+	.	ID=gene1234;Name=holB;Dbxref=GeneID:7147807;gbkey=Gene;gene=holB;locus_tag=EC55989_1211
NC_011748.1	RefSeq	CDS	1265900	1266904	.	+	0	ID=cds1155;Name=YP_002402299.1;Parent=gene1234;Note=catalyzes the DNA-template-directed extension of the 3%27-end of a DNA strand%3B the delta%27 subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA;Dbxref=Genbank:YP_002402299.1,GeneID:7147807;gbkey=CDS;product=DNA polymerase III subunit delta%27;protein_id=YP_002402299.1;transl_table=11
NC_011748.1	RefSeq	gene	1266915	1267712	.	+	.	ID=gene1235;Name=ycfH;Dbxref=GeneID:7146454;gbkey=Gene;gene=ycfH;locus_tag=EC55989_1212
NC_011748.1	RefSeq	CDS	1266915	1267712	.	+	0	ID=cds1156;Name=YP_002402300.1;Parent=gene1235;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 8505303%2C 8509334%2C 10747959%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002402300.1,GeneID:7146454;gbkey=CDS;product=metallodependent hydrolase;protein_id=YP_002402300.1;transl_table=11
NC_011748.1	RefSeq	gene	1268007	1269440	.	+	.	ID=gene1236;Name=ptsG;Dbxref=GeneID:7148300;gbkey=Gene;gene=ptsG;locus_tag=EC55989_1213
NC_011748.1	RefSeq	CDS	1268007	1269440	.	+	0	ID=cds1157;Name=YP_002402301.1;Parent=gene1236;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;Dbxref=Genbank:YP_002402301.1,GeneID:7148300;gbkey=CDS;product=PTS system glucose-specific transporter subunit IIBC;protein_id=YP_002402301.1;transl_table=11
NC_011748.1	RefSeq	gene	1269500	1271689	.	-	.	ID=gene1237;Name=fhuE;Dbxref=GeneID:7147286;gbkey=Gene;gene=fhuE;locus_tag=EC55989_1214
NC_011748.1	RefSeq	CDS	1269500	1271689	.	-	0	ID=cds1158;Name=YP_002402302.1;Parent=gene1237;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 90286919%2C 3032906%2C 10529396%3B Product type t : transporter;Dbxref=Genbank:YP_002402302.1,GeneID:7147286;gbkey=CDS;product=ferric-rhodotorulic acid outer membrane transporter;protein_id=YP_002402302.1;transl_table=11
NC_011748.1	RefSeq	gene	1272023	1272382	.	+	.	ID=gene1238;Name=hinT;Dbxref=GeneID:7146103;gbkey=Gene;gene=hinT;locus_tag=EC55989_1215
NC_011748.1	RefSeq	CDS	1272023	1272382	.	+	0	ID=cds1159;Name=YP_002402303.1;Parent=gene1238;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 15703176%2C 10493123%2C 2162465%3B Product type e : enzyme;Dbxref=Genbank:YP_002402303.1,GeneID:7146103;gbkey=CDS;product=purine nucleoside phosphoramidase;protein_id=YP_002402303.1;transl_table=11
NC_011748.1	RefSeq	gene	1272385	1272762	.	+	.	ID=gene1239;Name=ycfL;Dbxref=GeneID:7146427;gbkey=Gene;gene=ycfL;locus_tag=EC55989_1216
NC_011748.1	RefSeq	CDS	1272385	1272762	.	+	0	ID=cds1160;Name=YP_002402304.1;Parent=gene1239;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402304.1,GeneID:7146427;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402304.1;transl_table=11
NC_011748.1	RefSeq	gene	1272776	1273417	.	+	.	ID=gene1240;Name=ycfM;Dbxref=GeneID:7148302;gbkey=Gene;gene=ycfM;locus_tag=EC55989_1217
NC_011748.1	RefSeq	CDS	1272776	1273417	.	+	0	ID=cds1161;Name=YP_002402305.1;Parent=gene1240;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002402305.1,GeneID:7148302;gbkey=CDS;product=outer membrane lipoprotein;protein_id=YP_002402305.1;transl_table=11
NC_011748.1	RefSeq	gene	1273398	1274222	.	+	.	ID=gene1241;Name=thiK;Dbxref=GeneID:7148303;gbkey=Gene;gene=thiK;locus_tag=EC55989_1218
NC_011748.1	RefSeq	CDS	1273398	1274222	.	+	0	ID=cds1162;Name=YP_002402306.1;Parent=gene1241;Note=catalyzes the phosphorylation of thiamine to thiamine phosphate;Dbxref=Genbank:YP_002402306.1,GeneID:7148303;gbkey=CDS;product=thiamine kinase;protein_id=YP_002402306.1;transl_table=11
NC_011748.1	RefSeq	gene	1274233	1275258	.	+	.	ID=gene1242;Name=nagZ;Dbxref=GeneID:7148304;gbkey=Gene;gene=nagZ;locus_tag=EC55989_1219
NC_011748.1	RefSeq	CDS	1274233	1275258	.	+	0	ID=cds1163;Name=YP_002402307.1;Parent=gene1242;Note=hydrolyzes the terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides;Dbxref=Genbank:YP_002402307.1,GeneID:7148304;gbkey=CDS;product=beta-hexosaminidase;protein_id=YP_002402307.1;transl_table=11
NC_011748.1	RefSeq	gene	1275281	1275823	.	+	.	ID=gene1243;Name=ycfP;Dbxref=GeneID:7146953;gbkey=Gene;gene=ycfP;locus_tag=EC55989_1220
NC_011748.1	RefSeq	CDS	1275281	1275823	.	+	0	ID=cds1164;Name=YP_002402308.1;Parent=gene1243;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402308.1,GeneID:7146953;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402308.1;transl_table=11
NC_011748.1	RefSeq	gene	1276231	1277535	.	+	.	ID=gene1244;Name=ndh;Dbxref=GeneID:7148305;gbkey=Gene;gene=ndh;locus_tag=EC55989_1221
NC_011748.1	RefSeq	CDS	1276231	1277535	.	+	0	ID=cds1165;Name=YP_002402309.1;Parent=gene1244;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 14766919%2C 20130027%2C 81256452%2C 92296775%2C 94042945%2C 99441207%2C 6265208%3B Product type e : enzyme;Dbxref=Genbank:YP_002402309.1,GeneID:7148305;gbkey=CDS;product=respiratory NADH dehydrogenase 2%2Fcupric reductase;protein_id=YP_002402309.1;transl_table=11
NC_011748.1	RefSeq	gene	1277745	1278284	.	+	.	ID=gene1245;Name=ycfJ;Dbxref=GeneID:7146981;gbkey=Gene;gene=ycfJ;locus_tag=EC55989_1222
NC_011748.1	RefSeq	CDS	1277745	1278284	.	+	0	ID=cds1166;Name=YP_002402310.1;Parent=gene1245;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 6265208%2C 7984428;Dbxref=Genbank:YP_002402310.1,GeneID:7146981;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402310.1;transl_table=11
NC_011748.1	RefSeq	gene	1278346	1278978	.	-	.	ID=gene1246;Name=ycfQ;Dbxref=GeneID:7148301;gbkey=Gene;gene=ycfQ;locus_tag=EC55989_1223
NC_011748.1	RefSeq	CDS	1278346	1278978	.	-	0	ID=cds1167;Name=YP_002402311.1;Parent=gene1246;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pr :  regulator;Dbxref=Genbank:YP_002402311.1,GeneID:7148301;gbkey=CDS;product=DNA-binding transcriptional regulator;protein_id=YP_002402311.1;transl_table=11
NC_011748.1	RefSeq	gene	1279219	1279476	.	+	.	ID=gene1247;Name=ycfR;Dbxref=GeneID:7148306;gbkey=Gene;gene=ycfR;locus_tag=EC55989_1224
NC_011748.1	RefSeq	CDS	1279219	1279476	.	+	0	ID=cds1168;Name=YP_002402312.1;Parent=gene1247;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 14727089;Dbxref=Genbank:YP_002402312.1,GeneID:7148306;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402312.1;transl_table=11
NC_011748.1	RefSeq	gene	1279559	1280521	.	-	.	ID=gene1248;Name=ycfS;Dbxref=GeneID:7148307;gbkey=Gene;gene=ycfS;locus_tag=EC55989_1225
NC_011748.1	RefSeq	CDS	1279559	1280521	.	-	0	ID=cds1169;Name=YP_002402313.1;Parent=gene1248;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402313.1,GeneID:7148307;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402313.1;transl_table=11
NC_011748.1	RefSeq	gene	1280665	1284111	.	-	.	ID=gene1249;Name=mfd;Dbxref=GeneID:7148308;gbkey=Gene;gene=mfd;locus_tag=EC55989_1226
NC_011748.1	RefSeq	CDS	1280665	1284111	.	-	0	ID=cds1170;Name=YP_002402314.1;Parent=gene1249;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 14602898%2C 90158497%2C 92107993%2C 8465200%3B Product type f : factor;Dbxref=Genbank:YP_002402314.1,GeneID:7148308;gbkey=CDS;product=transcription-repair coupling factor;protein_id=YP_002402314.1;transl_table=11
NC_011748.1	RefSeq	gene	1284239	1285312	.	-	.	ID=gene1250;Name=ycfT;Dbxref=GeneID:7146838;gbkey=Gene;gene=ycfT;locus_tag=EC55989_1227
NC_011748.1	RefSeq	CDS	1284239	1285312	.	-	0	ID=cds1171;Name=YP_002402315.1;Parent=gene1250;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002402315.1,GeneID:7146838;gbkey=CDS;product=inner membrane protein;protein_id=YP_002402315.1;transl_table=11
NC_011748.1	RefSeq	gene	1285574	1286773	.	+	.	ID=gene1251;Name=lolC;Dbxref=GeneID:7148309;gbkey=Gene;gene=lolC;locus_tag=EC55989_1228
NC_011748.1	RefSeq	CDS	1285574	1286773	.	+	0	ID=cds1172;Name=YP_002402316.1;Parent=gene1251;Note=part of the ATP-dependent transport system LolCDE%3B responsible for the localization of lipoproteins to the periplasmic surface of the outer membrane;Dbxref=Genbank:YP_002402316.1,GeneID:7148309;gbkey=CDS;product=outer membrane-specific lipoprotein transporter subunit LolC;protein_id=YP_002402316.1;transl_table=11
NC_011748.1	RefSeq	gene	1286766	1287467	.	+	.	ID=gene1252;Name=lolD;Dbxref=GeneID:7146717;gbkey=Gene;gene=lolD;locus_tag=EC55989_1229
NC_011748.1	RefSeq	CDS	1286766	1287467	.	+	0	ID=cds1173;Name=YP_002402317.1;Parent=gene1252;Note=outer membrane specific%3B part of transporter complex lolCDE involved in the translocation of mature outer membrane-directed lipoproteins%2C from the inner membrane to the periplasmic chaperone;Dbxref=Genbank:YP_002402317.1,GeneID:7146717;gbkey=CDS;product=lipoprotein transporter ATP-binding subunit;protein_id=YP_002402317.1;transl_table=11
NC_011748.1	RefSeq	gene	1287467	1288711	.	+	.	ID=gene1253;Name=lolE;Dbxref=GeneID:7146718;gbkey=Gene;gene=lolE;locus_tag=EC55989_1230
NC_011748.1	RefSeq	CDS	1287467	1288711	.	+	0	ID=cds1174;Name=YP_002402318.1;Parent=gene1253;Note=part of the ATP-dependent transport system LolCDE%3B responsible for the localization of lipoproteins to the periplasmic surface of the outer membrane;Dbxref=Genbank:YP_002402318.1,GeneID:7146718;gbkey=CDS;product=outer membrane-specific lipoprotein transporter subunit LolE;protein_id=YP_002402318.1;transl_table=11
NC_011748.1	RefSeq	gene	1288740	1289651	.	+	.	ID=gene1254;Name=ycfX;Dbxref=GeneID:7146719;gbkey=Gene;gene=ycfX;locus_tag=EC55989_1231
NC_011748.1	RefSeq	CDS	1288740	1289651	.	+	0	ID=cds1175;Name=YP_002402319.1;Parent=gene1254;Note=catalyzes the formation of N-acetyl-D-glucosamine-6-phosphate from N-acetyl-D-glucosamine;Dbxref=Genbank:YP_002402319.1,GeneID:7146719;gbkey=CDS;product=N-acetyl-D-glucosamine kinase;protein_id=YP_002402319.1;transl_table=11
NC_011748.1	RefSeq	gene	1289667	1290488	.	+	.	ID=gene1255;Name=cobB;Dbxref=GeneID:7148310;gbkey=Gene;gene=cobB;locus_tag=EC55989_1232
NC_011748.1	RefSeq	CDS	1289667	1290488	.	+	0	ID=cds1176;Name=YP_002402320.1;Parent=gene1255;Note=Modulates the activities of several enzymes which are inactive in their acetylated form;Dbxref=Genbank:YP_002402320.1,GeneID:7148310;gbkey=CDS;product=NAD-dependent deacetylase;protein_id=YP_002402320.1;transl_table=11
NC_011748.1	RefSeq	gene	1290627	1291349	.	-	.	ID=gene1256;Name=ycfZ;Dbxref=GeneID:7145735;gbkey=Gene;gene=ycfZ;locus_tag=EC55989_1233
NC_011748.1	RefSeq	CDS	1290627	1291349	.	-	0	ID=cds1177;Name=YP_002402321.1;Parent=gene1256;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002402321.1,GeneID:7145735;gbkey=CDS;product=inner membrane protein;protein_id=YP_002402321.1;transl_table=11
NC_011748.1	RefSeq	gene	1291412	1291882	.	-	.	ID=gene1257;Name=EC55989_1234;Dbxref=GeneID:7148311;gbkey=Gene;locus_tag=EC55989_1234
NC_011748.1	RefSeq	CDS	1291412	1291882	.	-	0	ID=cds1178;Name=YP_002402322.1;Parent=gene1257;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402322.1,GeneID:7148311;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402322.1;transl_table=11
NC_011748.1	RefSeq	gene	1291931	1292977	.	-	.	ID=gene1258;Name=potD;Dbxref=GeneID:7144535;gbkey=Gene;gene=potD;locus_tag=EC55989_1235
NC_011748.1	RefSeq	CDS	1291931	1292977	.	-	0	ID=cds1179;Name=YP_002402323.1;Parent=gene1258;Note=can transport spermidine and putrescine but affinity is higher for spermidine%3B forms a complex of PotA2BCD%3B PotD is a periplasmic component that binds the substrate;Dbxref=Genbank:YP_002402323.1,GeneID:7144535;gbkey=CDS;product=spermidine%2Fputrescine ABC transporter substrate-binding protein;protein_id=YP_002402323.1;transl_table=11
NC_011748.1	RefSeq	gene	1292974	1293768	.	-	.	ID=gene1259;Name=potC;Dbxref=GeneID:7147212;gbkey=Gene;gene=potC;locus_tag=EC55989_1236
NC_011748.1	RefSeq	CDS	1292974	1293768	.	-	0	ID=cds1180;Name=YP_002402324.1;Parent=gene1259;Note=can transport spermidine and putrescine but affinity is higher for spermidine%3B forms a complex of PotA2BCD%3B PotC is a membrane component;Dbxref=Genbank:YP_002402324.1,GeneID:7147212;gbkey=CDS;product=spermidine%2Fputrescine ABC transporter membrane protein;protein_id=YP_002402324.1;transl_table=11
NC_011748.1	RefSeq	gene	1293765	1294592	.	-	.	ID=gene1260;Name=potB;Dbxref=GeneID:7147211;gbkey=Gene;gene=potB;locus_tag=EC55989_1237
NC_011748.1	RefSeq	CDS	1293765	1294592	.	-	0	ID=cds1181;Name=YP_002402325.1;Parent=gene1260;Note=can transport spermidine and putrescine but affinity is higher for spermidine%3B forms a complex of PotA2BCD%3B PotB is a membrane component;Dbxref=Genbank:YP_002402325.1,GeneID:7147211;gbkey=CDS;product=spermidine%2Fputrescine ABC transporter membrane protein;protein_id=YP_002402325.1;transl_table=11
NC_011748.1	RefSeq	gene	1294606	1295742	.	-	.	ID=gene1261;Name=potA;Dbxref=GeneID:7147210;gbkey=Gene;gene=potA;locus_tag=EC55989_1238
NC_011748.1	RefSeq	CDS	1294606	1295742	.	-	0	ID=cds1182;Name=YP_002402326.1;Parent=gene1261;Note=functions together with PotBCD %28A2BCD%29 in ATP-dependent polyamine transport%3B PotA is the membrane-associated ATPase;Dbxref=Genbank:YP_002402326.1,GeneID:7147210;gbkey=CDS;product=putrescine%2Fspermidine ABC transporter ATPase;protein_id=YP_002402326.1;transl_table=11
NC_011748.1	RefSeq	gene	1295721	1295972	.	-	.	ID=gene1262;Name=EC55989_1239;Dbxref=GeneID:7147209;gbkey=Gene;locus_tag=EC55989_1239
NC_011748.1	RefSeq	CDS	1295721	1295972	.	-	0	ID=cds1183;Name=YP_002402327.1;Parent=gene1262;Note=Evidence 6 : Doubtful CDS;Dbxref=Genbank:YP_002402327.1,GeneID:7147209;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402327.1;transl_table=11
NC_011748.1	RefSeq	gene	1295950	1297221	.	+	.	ID=gene1263;Name=pepT;Dbxref=GeneID:7144536;gbkey=Gene;gene=pepT;locus_tag=EC55989_1240
NC_011748.1	RefSeq	CDS	1295950	1297221	.	+	0	ID=cds1184;Name=YP_002402328.1;Parent=gene1263;Note=catalyzes the release of the N-terminal amino acid from a tripeptide;Dbxref=Genbank:YP_002402328.1,GeneID:7144536;gbkey=CDS;product=peptidase T;protein_id=YP_002402328.1;transl_table=11
NC_011748.1	RefSeq	gene	1297367	1298488	.	-	.	ID=gene1264;Name=ycfD;Dbxref=GeneID:7147137;gbkey=Gene;gene=ycfD;locus_tag=EC55989_1241
NC_011748.1	RefSeq	CDS	1297367	1298488	.	-	0	ID=cds1185;Name=YP_002402329.1;Parent=gene1264;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402329.1,GeneID:7147137;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402329.1;transl_table=11
NC_011748.1	RefSeq	gene	1298564	1300024	.	-	.	ID=gene1265;Name=phoQ;Dbxref=GeneID:7148299;gbkey=Gene;gene=phoQ;locus_tag=EC55989_1242
NC_011748.1	RefSeq	CDS	1298564	1300024	.	-	0	ID=cds1186;Name=YP_002402330.1;Parent=gene1265;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 92105017%3B Product type r : regulator;Dbxref=Genbank:YP_002402330.1,GeneID:7148299;gbkey=CDS;product=sensor protein PhoQ;protein_id=YP_002402330.1;transl_table=11
NC_011748.1	RefSeq	gene	1300024	1300695	.	-	.	ID=gene1266;Name=phoP;Dbxref=GeneID:7147184;gbkey=Gene;gene=phoP;locus_tag=EC55989_1243
NC_011748.1	RefSeq	CDS	1300024	1300695	.	-	0	ID=cds1187;Name=YP_002402331.1;Parent=gene1266;Note=response regulator in two-component regulatory system with PhoQ%3B involved in magnesium starvation and stress;Dbxref=Genbank:YP_002402331.1,GeneID:7147184;gbkey=CDS;product=DNA-binding transcriptional regulator PhoP;protein_id=YP_002402331.1;transl_table=11
NC_011748.1	RefSeq	gene	1300863	1302233	.	-	.	ID=gene1267;Name=purB;Dbxref=GeneID:7147183;gbkey=Gene;gene=purB;locus_tag=EC55989_1244
NC_011748.1	RefSeq	CDS	1300863	1302233	.	-	0	ID=cds1188;Name=YP_002402332.1;Parent=gene1267;Note=Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide;Dbxref=Genbank:YP_002402332.1,GeneID:7147183;gbkey=CDS;product=adenylosuccinate lyase;protein_id=YP_002402332.1;transl_table=11
NC_011748.1	RefSeq	gene	1302237	1302878	.	-	.	ID=gene1268;Name=hflD;Dbxref=GeneID:7147293;gbkey=Gene;gene=hflD;locus_tag=EC55989_1245
NC_011748.1	RefSeq	CDS	1302237	1302878	.	-	0	ID=cds1189;Name=YP_002402333.1;Parent=gene1268;Note=HflD%3B UPF0274%3B in Escherichia coli this protein is peripherally associated with the membrane and appears to act with lambda CII protein%3B in Haemophilus influenzae a knockout of the HI0638 gene affected paracytosis;Dbxref=Genbank:YP_002402333.1,GeneID:7147293;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402333.1;transl_table=11
NC_011748.1	RefSeq	gene	1302914	1304020	.	-	.	ID=gene1269;Name=mnmA;Dbxref=GeneID:7146421;gbkey=Gene;gene=mnmA;locus_tag=EC55989_1246
NC_011748.1	RefSeq	CDS	1302914	1304020	.	-	0	ID=cds1190;Name=YP_002402334.1;Parent=gene1269;Note=catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs;Dbxref=Genbank:YP_002402334.1,GeneID:7146421;gbkey=CDS;product=tRNA-specific 2-thiouridylase MnmA;protein_id=YP_002402334.1;transl_table=11
NC_011748.1	RefSeq	gene	1304074	1304535	.	-	.	ID=gene1270;Name=ymfB;Dbxref=GeneID:7147849;gbkey=Gene;gene=ymfB;locus_tag=EC55989_1247
NC_011748.1	RefSeq	CDS	1304074	1304535	.	-	0	ID=cds1191;Name=YP_002402335.1;Parent=gene1270;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 15292217%3B Product type e : enzyme;Dbxref=Genbank:YP_002402335.1,GeneID:7147849;gbkey=CDS;product=bifunctional thiamin pyrimidine pyrophosphate hydrolase and thiamin pyrophosphate hydrolase;protein_id=YP_002402335.1;transl_table=11
NC_011748.1	RefSeq	gene	1304545	1305198	.	-	.	ID=gene1271;Name=ymfC;Dbxref=GeneID:7149272;gbkey=Gene;gene=ymfC;locus_tag=EC55989_1248
NC_011748.1	RefSeq	CDS	1304545	1305198	.	-	0	ID=cds1192;Name=YP_002402336.1;Parent=gene1271;Note=catalyzes the formation of pseudouridine from uracil-2457 in 23S ribosomal RNA;Dbxref=Genbank:YP_002402336.1,GeneID:7149272;gbkey=CDS;product=23S rRNA pseudouridine synthase E;protein_id=YP_002402336.1;transl_table=11
NC_011748.1	RefSeq	gene	1305370	1306620	.	+	.	ID=gene1272;Name=icd;Dbxref=GeneID:7149273;gbkey=Gene;gene=icd;locus_tag=EC55989_1249
NC_011748.1	RefSeq	CDS	1305370	1306620	.	+	0	ID=cds1193;Name=YP_002402337.1;Parent=gene1272;Note=Converts isocitrate to alpha ketoglutarate;Dbxref=Genbank:YP_002402337.1,GeneID:7149273;gbkey=CDS;product=isocitrate dehydrogenase;protein_id=YP_002402337.1;transl_table=11
NC_011748.1	RefSeq	gene	1306723	1307046	.	-	.	ID=gene1273;Name=elbA;Dbxref=GeneID:7146537;gbkey=Gene;gene=elbA;locus_tag=EC55989_1250
NC_011748.1	RefSeq	CDS	1306723	1307046	.	-	0	ID=cds1194;Name=YP_002402338.1;Parent=gene1273;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 9603997;Dbxref=Genbank:YP_002402338.1,GeneID:7146537;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402338.1;transl_table=11
NC_011748.1	RefSeq	gene	1307742	1308146	.	-	.	ID=gene1274;Name=ycgX;Dbxref=GeneID:7145987;gbkey=Gene;gene=ycgX;locus_tag=EC55989_1251
NC_011748.1	RefSeq	CDS	1307742	1308146	.	-	0	ID=cds1195;Name=YP_002402339.1;Parent=gene1274;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402339.1,GeneID:7145987;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402339.1;transl_table=11
NC_011748.1	RefSeq	gene	1308367	1309098	.	-	.	ID=gene1275;Name=ycgE;Dbxref=GeneID:7148323;gbkey=Gene;gene=ycgE;locus_tag=EC55989_1252
NC_011748.1	RefSeq	CDS	1308367	1309098	.	-	0	ID=cds1196;Name=YP_002402340.1;Parent=gene1275;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pr :  regulator;Dbxref=Genbank:YP_002402340.1,GeneID:7148323;gbkey=CDS;product=DNA-binding transcriptional regulator;protein_id=YP_002402340.1;transl_table=11
NC_011748.1	RefSeq	gene	1309303	1310514	.	-	.	ID=gene1276;Name=ycgF;Dbxref=GeneID:7148313;gbkey=Gene;gene=ycgF;locus_tag=EC55989_1253
NC_011748.1	RefSeq	CDS	1309303	1310514	.	-	0	ID=cds1197;Name=YP_002402341.1;Parent=gene1276;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 16533062%2C 15453820%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002402341.1,GeneID:7148313;gbkey=CDS;product=cyclic-di-GMP phosphodiesterase%3B blue-light sensing protein using FAD %28BLUF%29;protein_id=YP_002402341.1;transl_table=11
NC_011748.1	RefSeq	gene	1310828	1311064	.	+	.	ID=gene1277;Name=ycgZ;Dbxref=GeneID:7148314;gbkey=Gene;gene=ycgZ;locus_tag=EC55989_1254
NC_011748.1	RefSeq	CDS	1310828	1311064	.	+	0	ID=cds1198;Name=YP_002402342.1;Parent=gene1277;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402342.1,GeneID:7148314;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402342.1;transl_table=11
NC_011748.1	RefSeq	gene	1311107	1311379	.	+	.	ID=gene1278;Name=ymgA;Dbxref=GeneID:7148325;gbkey=Gene;gene=ymgA;locus_tag=EC55989_1255
NC_011748.1	RefSeq	CDS	1311107	1311379	.	+	0	ID=cds1199;Name=YP_002402343.1;Parent=gene1278;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402343.1,GeneID:7148325;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402343.1;transl_table=11
NC_011748.1	RefSeq	gene	1311408	1311674	.	+	.	ID=gene1279;Name=ymgB;Dbxref=GeneID:7149275;gbkey=Gene;gene=ymgB;locus_tag=EC55989_1256
NC_011748.1	RefSeq	CDS	1311408	1311674	.	+	0	ID=cds1200;Name=YP_002402344.1;Parent=gene1279;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402344.1,GeneID:7149275;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402344.1;transl_table=11
NC_011748.1	RefSeq	gene	1311787	1312035	.	+	.	ID=gene1280;Name=ymgC;Dbxref=GeneID:7149276;gbkey=Gene;gene=ymgC;locus_tag=EC55989_1257
NC_011748.1	RefSeq	CDS	1311787	1312035	.	+	0	ID=cds1201;Name=YP_002402345.1;Parent=gene1280;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402345.1,GeneID:7149276;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402345.1;transl_table=11
NC_011748.1	RefSeq	gene	1312367	1313890	.	+	.	ID=gene1281;Name=ycgG;Dbxref=GeneID:7149277;gbkey=Gene;gene=ycgG;locus_tag=EC55989_1258
NC_011748.1	RefSeq	CDS	1312367	1313890	.	+	0	ID=cds1202;Name=YP_002402346.1;Parent=gene1281;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002402346.1,GeneID:7149277;gbkey=CDS;product=inner membrane protein;protein_id=YP_002402346.1;transl_table=11
NC_011748.1	RefSeq	gene	1314022	1314240	.	+	.	ID=gene1282;Name=ymgF;Dbxref=GeneID:7148315;gbkey=Gene;gene=ymgF;locus_tag=EC55989_1259
NC_011748.1	RefSeq	CDS	1314022	1314240	.	+	0	ID=cds1203;Name=YP_002402347.1;Parent=gene1282;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402347.1,GeneID:7148315;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402347.1;transl_table=11
NC_011748.1	RefSeq	gene	1314640	1314849	.	+	.	ID=gene1283;Name=EC55989_1260;Dbxref=GeneID:7149280;gbkey=Gene;locus_tag=EC55989_1260
NC_011748.1	RefSeq	CDS	1314640	1314849	.	+	0	ID=cds1204;Name=YP_002402348.1;Parent=gene1283;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402348.1,GeneID:7149280;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402348.1;transl_table=11
NC_011748.1	RefSeq	gene	1315056	1315331	.	+	.	ID=gene1284;Name=insA;Dbxref=GeneID:7144537;gbkey=Gene;gene=insA;locus_tag=EC55989_1261
NC_011748.1	RefSeq	CDS	1315056	1315331	.	+	0	ID=cds1205;Name=YP_002402349.1;Parent=gene1284;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 9689094%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402349.1,GeneID:7144537;gbkey=CDS;product=IS1 repressor protein InsA;protein_id=YP_002402349.1;transl_table=11
NC_011748.1	RefSeq	gene	1315250	1315753	.	+	.	ID=gene1285;Name=insB;Dbxref=GeneID:7146574;gbkey=Gene;gene=insB;locus_tag=EC55989_1262
NC_011748.1	RefSeq	CDS	1315250	1315753	.	+	0	ID=cds1206;Name=YP_002402350.1;Parent=gene1285;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 9689094%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402350.1,GeneID:7146574;gbkey=CDS;product=IS1 transposase InsAB%27;protein_id=YP_002402350.1;transl_table=11
NC_011748.1	RefSeq	gene	1315755	1318064	.	+	.	ID=gene1286;Name=EC55989_1263;Dbxref=GeneID:7146586;gbkey=Gene;locus_tag=EC55989_1263
NC_011748.1	RefSeq	CDS	1315755	1318064	.	+	0	ID=cds1207;Name=YP_002402351.1;Parent=gene1286;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002402351.1,GeneID:7146586;gbkey=CDS;product=Outer membrane autotransporter barrel%2C pectin lyase fold;protein_id=YP_002402351.1;transl_table=11
NC_011748.1	RefSeq	gene	1318121	1318450	.	-	.	ID=gene1287;Name=ymgD;Dbxref=GeneID:7144538;gbkey=Gene;gene=ymgD;locus_tag=EC55989_1264
NC_011748.1	RefSeq	CDS	1318121	1318450	.	-	0	ID=cds1208;Name=YP_002402352.1;Parent=gene1287;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402352.1,GeneID:7144538;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402352.1;transl_table=11
NC_011748.1	RefSeq	gene	1318460	1318735	.	-	.	ID=gene1288;Name=ymgG;Dbxref=GeneID:7149278;gbkey=Gene;gene=ymgG;locus_tag=EC55989_1265
NC_011748.1	RefSeq	CDS	1318460	1318735	.	-	0	ID=cds1209;Name=YP_002402353.1;Parent=gene1288;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402353.1,GeneID:7149278;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402353.1;transl_table=11
NC_011748.1	RefSeq	gene	1319281	1319724	.	+	.	ID=gene1289;Name=EC55989_1266;Dbxref=GeneID:7149281;gbkey=Gene;locus_tag=EC55989_1266
NC_011748.1	RefSeq	CDS	1319281	1319724	.	+	0	ID=cds1210;Name=YP_002402354.1;Parent=gene1289;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402354.1,GeneID:7149281;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402354.1;transl_table=11
NC_011748.1	RefSeq	gene	1320096	1320362	.	-	.	ID=gene1290;Name=minE;Dbxref=GeneID:7144539;gbkey=Gene;gene=minE;locus_tag=EC55989_1267
NC_011748.1	RefSeq	CDS	1320096	1320362	.	-	0	ID=cds1211;Name=YP_002402355.1;Parent=gene1290;Note=works in conjunction with MinC and MinD to enable cell division at the midpoint of the long axis of the cell;Dbxref=Genbank:YP_002402355.1,GeneID:7144539;gbkey=CDS;product=cell division topological specificity factor MinE;protein_id=YP_002402355.1;transl_table=11
NC_011748.1	RefSeq	gene	1320366	1321178	.	-	.	ID=gene1291;Name=minD;Dbxref=GeneID:7146859;gbkey=Gene;gene=minD;locus_tag=EC55989_1268
NC_011748.1	RefSeq	CDS	1320366	1321178	.	-	0	ID=cds1212;Name=YP_002402356.1;Parent=gene1291;Note=ATPase%3B with MinC inhibits cell division by blocking formation of the polar Z ring septums;Dbxref=Genbank:YP_002402356.1,GeneID:7146859;gbkey=CDS;product=cell division inhibitor MinD;protein_id=YP_002402356.1;transl_table=11
NC_011748.1	RefSeq	gene	1321202	1321897	.	-	.	ID=gene1292;Name=minC;Dbxref=GeneID:7146858;gbkey=Gene;gene=minC;locus_tag=EC55989_1269
NC_011748.1	RefSeq	CDS	1321202	1321897	.	-	0	ID=cds1213;Name=YP_002402357.1;Parent=gene1292;Note=blocks the formation of polar Z-ring septums;Dbxref=Genbank:YP_002402357.1,GeneID:7146858;gbkey=CDS;product=septum formation inhibitor;protein_id=YP_002402357.1;transl_table=11
NC_011748.1	RefSeq	gene	1322417	1322785	.	+	.	ID=gene1293;Name=ycgJ;Dbxref=GeneID:7146857;gbkey=Gene;gene=ycgJ;locus_tag=EC55989_1270
NC_011748.1	RefSeq	CDS	1322417	1322785	.	+	0	ID=cds1214;Name=YP_002402358.1;Parent=gene1293;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402358.1,GeneID:7146857;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402358.1;transl_table=11
NC_011748.1	RefSeq	gene	1322905	1323306	.	-	.	ID=gene1294;Name=ycgK;Dbxref=GeneID:7148316;gbkey=Gene;gene=ycgK;locus_tag=EC55989_1271
NC_011748.1	RefSeq	CDS	1322905	1323306	.	-	0	ID=cds1215;Name=YP_002402359.1;Parent=gene1294;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402359.1,GeneID:7148316;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402359.1;transl_table=11
NC_011748.1	RefSeq	gene	1323515	1323841	.	+	.	ID=gene1295;Name=ycgL;Dbxref=GeneID:7148317;gbkey=Gene;gene=ycgL;locus_tag=EC55989_1272
NC_011748.1	RefSeq	CDS	1323515	1323841	.	+	0	ID=cds1216;Name=YP_002402360.1;Parent=gene1295;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402360.1,GeneID:7148317;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402360.1;transl_table=11
NC_011748.1	RefSeq	gene	1323913	1324572	.	+	.	ID=gene1296;Name=ycgM;Dbxref=GeneID:7148318;gbkey=Gene;gene=ycgM;locus_tag=EC55989_1273
NC_011748.1	RefSeq	CDS	1323913	1324572	.	+	0	ID=cds1217;Name=YP_002402361.1;Parent=gene1296;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 15551868%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002402361.1,GeneID:7148318;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402361.1;transl_table=11
NC_011748.1	RefSeq	gene	1324664	1325110	.	+	.	ID=gene1297;Name=ycgN;Dbxref=GeneID:7148319;gbkey=Gene;gene=ycgN;locus_tag=EC55989_1274
NC_011748.1	RefSeq	CDS	1324664	1325110	.	+	0	ID=cds1218;Name=YP_002402362.1;Parent=gene1297;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402362.1,GeneID:7148319;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402362.1;transl_table=11
NC_011748.1	RefSeq	gene	1325317	1325598	.	-	.	ID=gene1298;Name=hlyE;Dbxref=GeneID:7148320;gbkey=Gene;gene=hlyE;locus_tag=EC55989_1275;pseudo=true
NC_011748.1	RefSeq	region	1325317	1325598	.	-	.	ID=id95;Note=fragment of hemolysin E %28part 2%29%3BEvidence 7 : Gene remnant%3B Product type c : carrier;Dbxref=GeneID:7148320;gbkey=misc_feature
NC_011748.1	RefSeq	gene	1325718	1326020	.	-	.	ID=gene1299;Name=hlyE;Dbxref=GeneID:7146445;gbkey=Gene;gene=hlyE;locus_tag=EC55989_1276;pseudo=true
NC_011748.1	RefSeq	region	1325718	1326020	.	-	.	ID=id96;Note=fragment of hemolysin E %28part 1%29%3BEvidence 7 : Gene remnant%3B Product type c : carrier;Dbxref=GeneID:7146445;gbkey=misc_feature
NC_011748.1	RefSeq	gene	1326117	1326371	.	-	.	ID=gene1300;Name=EC55989_1277;Dbxref=GeneID:7146446;gbkey=Gene;locus_tag=EC55989_1277
NC_011748.1	RefSeq	CDS	1326117	1326371	.	-	0	ID=cds1219;Name=YP_002402363.1;Parent=gene1300;Dbxref=Genbank:YP_002402363.1,GeneID:7146446;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402363.1;transl_table=11
NC_011748.1	RefSeq	gene	1326462	1326540	.	+	.	ID=gene1301;Name=C0299;Dbxref=GeneID:7144540;gbkey=Gene;gene=C0299;locus_tag=EC55989_misc_RNA_24
NC_011748.1	RefSeq	transcript	1326462	1326540	.	+	.	ID=rna53;Parent=gene1301;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 12202758%3B Product type n : RNA;Dbxref=GeneID:7144540;gbkey=misc_RNA;product=C0299
NC_011748.1	RefSeq	exon	1326462	1326540	.	+	.	ID=id97;Parent=rna53;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 12202758%3B Product type n : RNA;Dbxref=GeneID:7144540;gbkey=misc_RNA;product=C0299
NC_011748.1	RefSeq	gene	1326600	1327019	.	+	.	ID=gene1302;Name=umuD;Dbxref=GeneID:7145648;gbkey=Gene;gene=umuD;locus_tag=EC55989_1278
NC_011748.1	RefSeq	CDS	1326600	1327019	.	+	0	ID=cds1220;Name=YP_002402364.1;Parent=gene1302;Note=binds with UmuC protein to form functional DNA pol V %28UmuD%272UmuC%29%3B involved in translesion polymerization;Dbxref=Genbank:YP_002402364.1,GeneID:7145648;gbkey=CDS;product=DNA polymerase V subunit UmuD;protein_id=YP_002402364.1;transl_table=11
NC_011748.1	RefSeq	gene	1327019	1328287	.	+	.	ID=gene1303;Name=umuC;Dbxref=GeneID:7147922;gbkey=Gene;gene=umuC;locus_tag=EC55989_1279
NC_011748.1	RefSeq	CDS	1327019	1328287	.	+	0	ID=cds1221;Name=YP_002402365.1;Parent=gene1303;Note=binds processed UmuD protein to form functional DNA pol V %28UmuD%272UmuC%29%3B involved in translesion polymerization;Dbxref=Genbank:YP_002402365.1,GeneID:7147922;gbkey=CDS;product=DNA polymerase V subunit UmuC;protein_id=YP_002402365.1;transl_table=11
NC_011748.1	RefSeq	gene	1328333	1328863	.	-	.	ID=gene1304;Name=dsbB;Dbxref=GeneID:7147921;gbkey=Gene;gene=dsbB;locus_tag=EC55989_1280
NC_011748.1	RefSeq	CDS	1328333	1328863	.	-	0	ID=cds1222;Name=YP_002402366.1;Parent=gene1304;Note=disulfide oxidoreductase%3B integral membrane protein%3B required for perioplasmic disulfide bond formation%3B oxidizes DsbA protein;Dbxref=Genbank:YP_002402366.1,GeneID:7147921;gbkey=CDS;product=disulfide bond formation protein B;protein_id=YP_002402366.1;transl_table=11
NC_011748.1	RefSeq	gene	1329009	1330550	.	-	.	ID=gene1305;Name=nhaB;Dbxref=GeneID:7145951;gbkey=Gene;gene=nhaB;locus_tag=EC55989_1281
NC_011748.1	RefSeq	CDS	1329009	1330550	.	-	0	ID=cds1223;Name=YP_002402367.1;Parent=gene1305;Note=involved in regulation of intracellular pH under alkaline conditions;Dbxref=Genbank:YP_002402367.1,GeneID:7145951;gbkey=CDS;product=sodium%2Fproton antiporter;protein_id=YP_002402367.1;transl_table=11
NC_011748.1	RefSeq	gene	1330772	1331491	.	+	.	ID=gene1306;Name=fadR;Dbxref=GeneID:7146992;gbkey=Gene;gene=fadR;locus_tag=EC55989_1282
NC_011748.1	RefSeq	CDS	1330772	1331491	.	+	0	ID=cds1224;Name=YP_002402368.1;Parent=gene1306;Note=Multifunctional regulator of fatty acid metabolism;Dbxref=Genbank:YP_002402368.1,GeneID:7146992;gbkey=CDS;product=fatty acid metabolism regulator;protein_id=YP_002402368.1;transl_table=11
NC_011748.1	RefSeq	gene	1331543	1333075	.	-	.	ID=gene1307;Name=ycgB;Dbxref=GeneID:7146061;gbkey=Gene;gene=ycgB;locus_tag=EC55989_1283
NC_011748.1	RefSeq	CDS	1331543	1333075	.	-	0	ID=cds1225;Name=YP_002402369.1;Parent=gene1307;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402369.1,GeneID:7146061;gbkey=CDS;product=SpoVR family protein;protein_id=YP_002402369.1;transl_table=11
NC_011748.1	RefSeq	gene	1333405	1334703	.	+	.	ID=gene1308;Name=dadA;Dbxref=GeneID:7148312;gbkey=Gene;gene=dadA;locus_tag=EC55989_1284
NC_011748.1	RefSeq	CDS	1333405	1334703	.	+	0	ID=cds1226;Name=YP_002402370.1;Parent=gene1308;Note=catalyzes the oxidative deamination of D-amino acids;Dbxref=Genbank:YP_002402370.1,GeneID:7148312;gbkey=CDS;product=D-amino acid dehydrogenase small subunit;protein_id=YP_002402370.1;transl_table=11
NC_011748.1	RefSeq	gene	1334713	1335783	.	+	.	ID=gene1309;Name=dadX;Dbxref=GeneID:7145845;gbkey=Gene;gene=dadX;locus_tag=EC55989_1285
NC_011748.1	RefSeq	CDS	1334713	1335783	.	+	0	ID=cds1227;Name=YP_002402371.1;Parent=gene1309;Note=catabolic enzyme%2C converts L-alanine to D-alanine which is then oxidized to pyruvate by dadA;Dbxref=Genbank:YP_002402371.1,GeneID:7145845;gbkey=CDS;product=alanine racemase;protein_id=YP_002402371.1;transl_table=11
NC_011748.1	RefSeq	gene	1336169	1337905	.	-	.	ID=gene1310;Name=cvrA;Dbxref=GeneID:7145846;gbkey=Gene;gene=cvrA;locus_tag=EC55989_1287
NC_011748.1	RefSeq	CDS	1336169	1337905	.	-	0	ID=cds1228;Name=YP_002402372.1;Parent=gene1310;Note=the Vibrio parahaemolyticus gene VP2867 was found to be a potassium%2Fproton antiporter%3B can rapidly extrude potassium against a potassium gradient at alkaline pH when cloned and expressed in Escherichia coli;Dbxref=Genbank:YP_002402372.1,GeneID:7145846;gbkey=CDS;product=potassium%2Fproton antiporter;protein_id=YP_002402372.1;transl_table=11
NC_011748.1	RefSeq	gene	1338000	1338914	.	-	.	ID=gene1311;Name=ldcA;Dbxref=GeneID:7145801;gbkey=Gene;gene=ldcA;locus_tag=EC55989_1288
NC_011748.1	RefSeq	CDS	1338000	1338914	.	-	0	ID=cds1229;Name=YP_002402373.1;Parent=gene1311;Note=catalyzes the release of D-alanine from L-alanyl-D-glutamyl-meso-diaminopimelyl-D-alanine;Dbxref=Genbank:YP_002402373.1,GeneID:7145801;gbkey=CDS;product=L%2CD-carboxypeptidase A;protein_id=YP_002402373.1;transl_table=11
NC_011748.1	RefSeq	gene	1339014	1339625	.	+	.	ID=gene1312;Name=emtA;Dbxref=GeneID:7146680;gbkey=Gene;gene=emtA;locus_tag=EC55989_1289
NC_011748.1	RefSeq	CDS	1339014	1339625	.	+	0	ID=cds1230;Name=YP_002402374.1;Parent=gene1312;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 98317285%3B Product type e : enzyme;Dbxref=Genbank:YP_002402374.1,GeneID:7146680;gbkey=CDS;product=lytic murein endotransglycosylase E;protein_id=YP_002402374.1;transl_table=11
NC_011748.1	RefSeq	gene	1339627	1340361	.	-	.	ID=gene1313;Name=ycgR;Dbxref=GeneID:7145996;gbkey=Gene;gene=ycgR;locus_tag=EC55989_1290
NC_011748.1	RefSeq	CDS	1339627	1340361	.	-	0	ID=cds1231;Name=YP_002402375.1;Parent=gene1313;Note=Evidence 2b : Function of strongly homologous gene%3B PubMedId : 11031114%3B Product type cp : cell process;Dbxref=Genbank:YP_002402375.1,GeneID:7145996;gbkey=CDS;product=protein involved in flagellar function;protein_id=YP_002402375.1;transl_table=11
NC_011748.1	RefSeq	gene	1340562	1340816	.	+	.	ID=gene1314;Name=ymgE;Dbxref=GeneID:7148321;gbkey=Gene;gene=ymgE;locus_tag=EC55989_1291
NC_011748.1	RefSeq	CDS	1340562	1340816	.	+	0	ID=cds1232;Name=YP_002402376.1;Parent=gene1314;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002402376.1,GeneID:7148321;gbkey=CDS;product=inner membrane protein with transglycosylase-associated domain;protein_id=YP_002402376.1;transl_table=11
NC_011748.1	RefSeq	gene	1340994	1341434	.	+	.	ID=gene1315;Name=ycgY;Dbxref=GeneID:7149279;gbkey=Gene;gene=ycgY;locus_tag=EC55989_1292
NC_011748.1	RefSeq	CDS	1340994	1341434	.	+	0	ID=cds1233;Name=YP_002402377.1;Parent=gene1315;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402377.1,GeneID:7149279;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402377.1;transl_table=11
NC_011748.1	RefSeq	gene	1341513	1343210	.	-	.	ID=gene1316;Name=treA;Dbxref=GeneID:7148324;gbkey=Gene;gene=treA;locus_tag=EC55989_1293
NC_011748.1	RefSeq	CDS	1341513	1343210	.	-	0	ID=cds1234;Name=YP_002402378.1;Parent=gene1316;Note=periplasmic%3B catalyzes the hydrolysis of trehalose to glucose which can then be imported into the cell;Dbxref=Genbank:YP_002402378.1,GeneID:7148324;gbkey=CDS;product=trehalase;protein_id=YP_002402378.1;transl_table=11
NC_011748.1	RefSeq	gene	1343530	1344948	.	-	.	ID=gene1317;Name=dhaH;Dbxref=GeneID:7147835;gbkey=Gene;gene=dhaH;locus_tag=EC55989_1294
NC_011748.1	RefSeq	CDS	1343530	1344948	.	-	0	ID=cds1235;Name=YP_002402379.1;Parent=gene1317;Note=phosphotransferaese subunit%3B phosphorylates dihydroxyacetone along with DhaK%2FDhaL;Dbxref=Genbank:YP_002402379.1,GeneID:7147835;gbkey=CDS;product=dihydroxyacetone kinase subunit DhaM;protein_id=YP_002402379.1;transl_table=11
NC_011748.1	RefSeq	gene	1344959	1345591	.	-	.	ID=gene1318;Name=dhaL;Dbxref=GeneID:7145902;gbkey=Gene;gene=dhaL;locus_tag=EC55989_1295
NC_011748.1	RefSeq	CDS	1344959	1345591	.	-	0	ID=cds1236;Name=YP_002402380.1;Parent=gene1318;Note=with DhaK and DhaM catalyzes the phosphorylation of dihydroxyacetone;Dbxref=Genbank:YP_002402380.1,GeneID:7145902;gbkey=CDS;product=dihydroxyacetone kinase subunit DhaL;protein_id=YP_002402380.1;transl_table=11
NC_011748.1	RefSeq	gene	1345602	1346672	.	-	.	ID=gene1319;Name=dhaK;Dbxref=GeneID:7145904;gbkey=Gene;gene=dhaK;locus_tag=EC55989_1296
NC_011748.1	RefSeq	CDS	1345602	1346672	.	-	0	ID=cds1237;Name=YP_002402381.1;Parent=gene1319;Note=with DhaL and DhaM forms dihydroxyacetone kinase%2C which is responsible for phosphorylating dihydroxyacetone%3B DhaK is the dihydroxyacetone binding subunit of the dihydroxyacetone kinase;Dbxref=Genbank:YP_002402381.1,GeneID:7145904;gbkey=CDS;product=dihydroxyacetone kinase subunit DhaK;protein_id=YP_002402381.1;transl_table=11
NC_011748.1	RefSeq	gene	1346900	1348819	.	+	.	ID=gene1320;Name=dhaR;Dbxref=GeneID:7145903;gbkey=Gene;gene=dhaR;locus_tag=EC55989_1297
NC_011748.1	RefSeq	CDS	1346900	1348819	.	+	0	ID=cds1238;Name=YP_002402382.1;Parent=gene1320;Note=Positively regulates the dhaKLM operon from a sigma-70 promoter;Dbxref=Genbank:YP_002402382.1,GeneID:7145903;gbkey=CDS;product=DNA-binding transcriptional regulator DhaR;protein_id=YP_002402382.1;transl_table=11
NC_011748.1	RefSeq	gene	1348919	1351786	.	-	.	ID=gene1321;Name=ycgV;Dbxref=GeneID:7145905;gbkey=Gene;gene=ycgV;locus_tag=EC55989_1298
NC_011748.1	RefSeq	CDS	1348919	1351786	.	-	0	ID=cds1239;Name=YP_002402383.1;Parent=gene1321;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 15659678%3B Product type pf :  factor;Dbxref=Genbank:YP_002402383.1,GeneID:7145905;gbkey=CDS;product=adhesin%3B autotransporter;protein_id=YP_002402383.1;transl_table=11
NC_011748.1	RefSeq	gene	1352555	1353646	.	-	.	ID=gene1322;Name=ychF;Dbxref=GeneID:7148322;gbkey=Gene;gene=ychF;locus_tag=EC55989_1299
NC_011748.1	RefSeq	CDS	1352555	1353646	.	-	0	ID=cds1240;Name=YP_002402384.1;Parent=gene1322;Note=translation-associated GTPase%3B the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure %28PDB: 1NI3%29%3B fluorescence spectroscopy revealed nucleic acid binding%3B the yeast protein YBR025c interacts with the translation elongation factor eEF1;Dbxref=Genbank:YP_002402384.1,GeneID:7148322;gbkey=CDS;product=GTP-dependent nucleic acid-binding protein EngD;protein_id=YP_002402384.1;transl_table=11
NC_011748.1	RefSeq	gene	1353763	1354347	.	-	.	ID=gene1323;Name=pth;Dbxref=GeneID:7148328;gbkey=Gene;gene=pth;locus_tag=EC55989_1300
NC_011748.1	RefSeq	CDS	1353763	1354347	.	-	0	ID=cds1241;Name=YP_002402385.1;Parent=gene1323;Note=Enables the recycling of peptidyl-tRNAs produced at termination of translation;Dbxref=Genbank:YP_002402385.1,GeneID:7148328;gbkey=CDS;product=peptidyl-tRNA hydrolase;protein_id=YP_002402385.1;transl_table=11
NC_011748.1	RefSeq	gene	1354625	1354903	.	+	.	ID=gene1324;Name=ychH;Dbxref=GeneID:7147282;gbkey=Gene;gene=ychH;locus_tag=EC55989_1301
NC_011748.1	RefSeq	CDS	1354625	1354903	.	+	0	ID=cds1242;Name=YP_002402386.1;Parent=gene1324;Note=YchH%3B transcription activated by CRP %28cyclic AMP receptor protein%29%2C a global transcription factor involved in regulation of metabolism in enteric bacteria%3B ychH presents a class II promoter to bind CRP%3B unknown function;Dbxref=Genbank:YP_002402386.1,GeneID:7147282;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402386.1;transl_table=11
NC_011748.1	RefSeq	gene	1354958	1356637	.	-	.	ID=gene1325;Name=ychM;Dbxref=GeneID:7148330;gbkey=Gene;gene=ychM;locus_tag=EC55989_1302
NC_011748.1	RefSeq	CDS	1354958	1356637	.	-	0	ID=cds1243;Name=YP_002402387.1;Parent=gene1325;Note=role in sulfate transport across the inner membrane%3B member of the SulP family of sulfate transporters%3B seems to mediate transport via sulfate%2Fproton symport;Dbxref=Genbank:YP_002402387.1,GeneID:7148330;gbkey=CDS;product=sulfate transporter YchM;protein_id=YP_002402387.1;transl_table=11
NC_011748.1	RefSeq	gene	1356762	1357709	.	-	.	ID=gene1326;Name=prsA;Dbxref=GeneID:7148332;gbkey=Gene;gene=prsA;locus_tag=EC55989_1303
NC_011748.1	RefSeq	CDS	1356762	1357709	.	-	0	ID=cds1244;Name=YP_002402388.1;Parent=gene1326;Note=catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP;Dbxref=Genbank:YP_002402388.1,GeneID:7148332;gbkey=CDS;product=ribose-phosphate pyrophosphokinase;protein_id=YP_002402388.1;transl_table=11
NC_011748.1	RefSeq	gene	1357860	1358711	.	-	.	ID=gene1327;Name=ipk;Dbxref=GeneID:7147267;gbkey=Gene;gene=ipk;locus_tag=EC55989_1304
NC_011748.1	RefSeq	CDS	1357860	1358711	.	-	0	ID=cds1245;Name=YP_002402389.1;Parent=gene1327;Note=An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis;Dbxref=Genbank:YP_002402389.1,GeneID:7147267;gbkey=CDS;product=4-diphosphocytidyl-2-C-methyl-D-erythritol kinase;protein_id=YP_002402389.1;transl_table=11
NC_011748.1	RefSeq	gene	1358711	1359334	.	-	.	ID=gene1328;Name=lolB;Dbxref=GeneID:7146628;gbkey=Gene;gene=lolB;locus_tag=EC55989_1305
NC_011748.1	RefSeq	CDS	1358711	1359334	.	-	0	ID=cds1246;Name=YP_002402390.1;Parent=gene1328;Note=Incorporates lipoproteins in the outer membrane after they are released by the LolA protein;Dbxref=Genbank:YP_002402390.1,GeneID:7146628;gbkey=CDS;product=outer membrane lipoprotein LolB;protein_id=YP_002402390.1;transl_table=11
NC_011748.1	RefSeq	gene	1359548	1360804	.	+	.	ID=gene1329;Name=hemA;Dbxref=GeneID:7146716;gbkey=Gene;gene=hemA;locus_tag=EC55989_1306
NC_011748.1	RefSeq	CDS	1359548	1360804	.	+	0	ID=cds1247;Name=YP_002402391.1;Parent=gene1329;Note=catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA%28Glu%29 and NADPH%3B the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid%3B functions in porphyrin %28tetrapyrroles%29 biosynthesis%3B the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins;Dbxref=Genbank:YP_002402391.1,GeneID:7146716;gbkey=CDS;product=glutamyl-tRNA reductase;protein_id=YP_002402391.1;transl_table=11
NC_011748.1	RefSeq	gene	1360846	1361928	.	+	.	ID=gene1330;Name=prfA;Dbxref=GeneID:7146407;gbkey=Gene;gene=prfA;locus_tag=EC55989_1307
NC_011748.1	RefSeq	CDS	1360846	1361928	.	+	0	ID=cds1248;Name=YP_002402392.1;Parent=gene1330;Note=recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1%3B this protein is similar to release factor 2;Dbxref=Genbank:YP_002402392.1,GeneID:7146407;gbkey=CDS;product=peptide chain release factor 1;protein_id=YP_002402392.1;transl_table=11
NC_011748.1	RefSeq	gene	1361928	1362761	.	+	.	ID=gene1331;Name=prmC;Dbxref=GeneID:7147240;gbkey=Gene;gene=prmC;locus_tag=EC55989_1308
NC_011748.1	RefSeq	CDS	1361928	1362761	.	+	0	ID=cds1249;Name=YP_002402393.1;Parent=gene1331;Note=HemK%3B PrmC%3B transfers a methyl group from S-adenosylmethionine to amide nitrogen of specific glutamine residues in protein chain release factors PrfA and PrfB;Dbxref=Genbank:YP_002402393.1,GeneID:7147240;gbkey=CDS;product=N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase;protein_id=YP_002402393.1;transl_table=11
NC_011748.1	RefSeq	gene	1362758	1363150	.	+	.	ID=gene1332;Name=ychQ;Dbxref=GeneID:7147251;gbkey=Gene;gene=ychQ;locus_tag=EC55989_1309
NC_011748.1	RefSeq	CDS	1362758	1363150	.	+	0	ID=cds1250;Name=YP_002402394.1;Parent=gene1332;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 10322010%3B Product type pr :  regulator;Dbxref=Genbank:YP_002402394.1,GeneID:7147251;gbkey=CDS;product=transcriptional regulator;protein_id=YP_002402394.1;transl_table=11
NC_011748.1	RefSeq	gene	1363154	1363963	.	+	.	ID=gene1333;Name=ychA;Dbxref=GeneID:7148335;gbkey=Gene;gene=ychA;locus_tag=EC55989_1310
NC_011748.1	RefSeq	CDS	1363154	1363963	.	+	0	ID=cds1251;Name=YP_002402395.1;Parent=gene1333;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 10322010%3B Product type pr :  regulator;Dbxref=Genbank:YP_002402395.1,GeneID:7148335;gbkey=CDS;product=transcriptional regulator;protein_id=YP_002402395.1;transl_table=11
NC_011748.1	RefSeq	gene	1363999	1364853	.	+	.	ID=gene1334;Name=kdsA;Dbxref=GeneID:7148326;gbkey=Gene;gene=kdsA;locus_tag=EC55989_1311
NC_011748.1	RefSeq	CDS	1363999	1364853	.	+	0	ID=cds1252;Name=YP_002402396.1;Parent=gene1334;Note=catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis;Dbxref=Genbank:YP_002402396.1,GeneID:7148326;gbkey=CDS;product=2-dehydro-3-deoxyphosphooctonate aldolase;protein_id=YP_002402396.1;transl_table=11
NC_011748.1	RefSeq	gene	1365002	1365169	.	-	.	ID=gene1335;Name=ldrB;Dbxref=GeneID:7146659;gbkey=Gene;gene=ldrB;locus_tag=EC55989_1312
NC_011748.1	RefSeq	CDS	1365002	1365169	.	-	0	ID=cds1253;Name=YP_002402397.1;Parent=gene1335;Note=Evidence 2b : Function of strongly homologous gene%3B Product type f : factor;Dbxref=Genbank:YP_002402397.1,GeneID:7146659;gbkey=CDS;product=small toxic polypeptide;protein_id=YP_002402397.1;transl_table=11
NC_011748.1	RefSeq	gene	1365162	1365221	.	+	.	ID=gene1336;Name=rdlA;Dbxref=GeneID:7146683;gbkey=Gene;gene=rdlA;locus_tag=EC55989_misc_RNA_25
NC_011748.1	RefSeq	transcript	1365162	1365221	.	+	.	ID=rna54;Parent=gene1336;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 12123448%3B Product type n : RNA;Dbxref=GeneID:7146683;gbkey=misc_RNA;product=RdlA
NC_011748.1	RefSeq	exon	1365162	1365221	.	+	.	ID=id98;Parent=rna54;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 12123448%3B Product type n : RNA;Dbxref=GeneID:7146683;gbkey=misc_RNA;product=RdlA
NC_011748.1	RefSeq	gene	1365538	1365645	.	-	.	ID=gene1337;Name=ldrB;Dbxref=GeneID:7147353;gbkey=Gene;gene=ldrB;locus_tag=EC55989_1313
NC_011748.1	RefSeq	CDS	1365538	1365645	.	-	0	ID=cds1254;Name=YP_002402398.1;Parent=gene1337;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B Product type f : factor;Dbxref=Genbank:YP_002402398.1,GeneID:7147353;gbkey=CDS;product=toxic polypeptide%2C small;protein_id=YP_002402398.1;transl_table=11
NC_011748.1	RefSeq	gene	1365693	1365756	.	+	.	ID=gene1338;Name=rdlB;Dbxref=GeneID:7146684;gbkey=Gene;gene=rdlB;locus_tag=EC55989_misc_RNA_26
NC_011748.1	RefSeq	transcript	1365693	1365756	.	+	.	ID=rna55;Parent=gene1338;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B Product type n : RNA;Dbxref=GeneID:7146684;gbkey=misc_RNA;product=RdlB
NC_011748.1	RefSeq	exon	1365693	1365756	.	+	.	ID=id99;Parent=rna55;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B Product type n : RNA;Dbxref=GeneID:7146684;gbkey=misc_RNA;product=RdlB
NC_011748.1	RefSeq	gene	1366050	1367150	.	-	.	ID=gene1339;Name=chaA;Dbxref=GeneID:7147354;gbkey=Gene;gene=chaA;locus_tag=EC55989_1314
NC_011748.1	RefSeq	CDS	1366050	1367150	.	-	0	ID=cds1255;Name=YP_002402399.1;Parent=gene1339;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 93266586%2C 94193576%2C 94292460%3B Product type t : transporter;Dbxref=Genbank:YP_002402399.1,GeneID:7147354;gbkey=CDS;product=calcium%2Fsodium:proton antiporter;protein_id=YP_002402399.1;transl_table=11
NC_011748.1	RefSeq	gene	1367420	1367650	.	+	.	ID=gene1340;Name=chaB;Dbxref=GeneID:7145688;gbkey=Gene;gene=chaB;locus_tag=EC55989_1315
NC_011748.1	RefSeq	CDS	1367420	1367650	.	+	0	ID=cds1256;Name=YP_002402400.1;Parent=gene1340;Note=in Escherichia coli this protein ly regulates the sodium%2Fproton %28also pH-independent calcium%2Fproton%29 antiporter chaA%3B has weak affinity for calcium and magnesium ions;Dbxref=Genbank:YP_002402400.1,GeneID:7145688;gbkey=CDS;product=cation transport regulator;protein_id=YP_002402400.1;transl_table=11
NC_011748.1	RefSeq	gene	1367787	1368503	.	+	.	ID=gene1341;Name=chaC;Dbxref=GeneID:7145689;gbkey=Gene;gene=chaC;locus_tag=EC55989_1316
NC_011748.1	RefSeq	CDS	1367787	1368503	.	+	0	ID=cds1257;Name=YP_002402401.1;Parent=gene1341;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B Product type r : regulator;Dbxref=Genbank:YP_002402401.1,GeneID:7145689;gbkey=CDS;product=regulatory protein for cation transport;protein_id=YP_002402401.1;transl_table=11
NC_011748.1	RefSeq	gene	1368547	1368900	.	-	.	ID=gene1342;Name=ychN;Dbxref=GeneID:7145690;gbkey=Gene;gene=ychN;locus_tag=EC55989_1317
NC_011748.1	RefSeq	CDS	1368547	1368900	.	-	0	ID=cds1258;Name=YP_002402402.1;Parent=gene1342;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402402.1,GeneID:7145690;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402402.1;transl_table=11
NC_011748.1	RefSeq	gene	1369226	1370479	.	+	.	ID=gene1343;Name=ychP;Dbxref=GeneID:7148333;gbkey=Gene;gene=ychP;locus_tag=EC55989_1318
NC_011748.1	RefSeq	CDS	1369226	1370479	.	+	0	ID=cds1259;Name=YP_002402403.1;Parent=gene1343;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 7567469%3B Product type pf :  factor;Dbxref=Genbank:YP_002402403.1,GeneID:7148333;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402403.1;transl_table=11
NC_011748.1	RefSeq	gene	1370480	1371130	.	-	.	ID=gene1344;Name=narL;Dbxref=GeneID:7148334;gbkey=Gene;gene=narL;locus_tag=EC55989_1319
NC_011748.1	RefSeq	CDS	1370480	1371130	.	-	0	ID=cds1260;Name=YP_002402404.1;Parent=gene1344;Note=two-component response regulator NarL%3B phosphorylated by NarQ%3B activates transcription of nitrate and nitrite reductase genes and represses transcription of fumarate reductase;Dbxref=Genbank:YP_002402404.1,GeneID:7148334;gbkey=CDS;product=transcriptional regulator NarL;protein_id=YP_002402404.1;transl_table=11
NC_011748.1	RefSeq	gene	1371123	1372919	.	-	.	ID=gene1345;Name=narX;Dbxref=GeneID:7146972;gbkey=Gene;gene=narX;locus_tag=EC55989_1320
NC_011748.1	RefSeq	CDS	1371123	1372919	.	-	0	ID=cds1261;Name=YP_002402405.1;Parent=gene1345;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 92276349%2C 92374842%2C 94083940%2C 2649492%2C 2657652%2C 2668029%3B Product type r : regulator;Dbxref=Genbank:YP_002402405.1,GeneID:7146972;gbkey=CDS;product=nitrate%2Fnitrite sensor protein NarX;protein_id=YP_002402405.1;transl_table=11
NC_011748.1	RefSeq	gene	1373258	1374649	.	+	.	ID=gene1346;Name=narK;Dbxref=GeneID:7146978;gbkey=Gene;gene=narK;locus_tag=EC55989_1321
NC_011748.1	RefSeq	CDS	1373258	1374649	.	+	0	ID=cds1262;Name=YP_002402406.1;Parent=gene1346;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 91258310%2C 2657652%2C 2668029%3B Product type t : transporter;Dbxref=Genbank:YP_002402406.1,GeneID:7146978;gbkey=CDS;product=nitrate%2Fnitrite transporter;protein_id=YP_002402406.1;transl_table=11
NC_011748.1	RefSeq	gene	1375165	1378908	.	+	.	ID=gene1347;Name=narG;Dbxref=GeneID:7146971;gbkey=Gene;gene=narG;locus_tag=EC55989_1322
NC_011748.1	RefSeq	CDS	1375165	1378908	.	+	0	ID=cds1263;Name=YP_002402407.1;Parent=gene1347;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 74167294%2C 89384449%2C 92121125%2C 2233673%2C 2668029%2C 2995309%2C 3053688%2C 3308846%2C 6094247%3B Product type e : enzyme;Dbxref=Genbank:YP_002402407.1,GeneID:7146971;gbkey=CDS;product=nitrate reductase 1 subunit alpha;protein_id=YP_002402407.1;transl_table=11
NC_011748.1	RefSeq	gene	1378905	1380443	.	+	.	ID=gene1348;Name=narH;Dbxref=GeneID:7146967;gbkey=Gene;gene=narH;locus_tag=EC55989_1323
NC_011748.1	RefSeq	CDS	1378905	1380443	.	+	0	ID=cds1264;Name=YP_002402408.1;Parent=gene1348;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 74167294%2C 89384449%2C 92121125%2C 1321049%2C 2832376%2C 3053688%2C 8383531%2C 8388253%2C 8664273%2C 9516445%3B Product type c : carrier;Dbxref=Genbank:YP_002402408.1,GeneID:7146967;gbkey=CDS;product=nitrate reductase 1 subunit%2C beta %28Fe-S%29;protein_id=YP_002402408.1;transl_table=11
NC_011748.1	RefSeq	gene	1380440	1381150	.	+	.	ID=gene1349;Name=narJ;Dbxref=GeneID:7146968;gbkey=Gene;gene=narJ;locus_tag=EC55989_1324
NC_011748.1	RefSeq	CDS	1380440	1381150	.	+	0	ID=cds1265;Name=YP_002402409.1;Parent=gene1349;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 89384449%2C 92121125%2C 9632249%2C 2832376%3B Product type f : factor;Dbxref=Genbank:YP_002402409.1,GeneID:7146968;gbkey=CDS;product=molybdenum-cofactor-assembly chaperone subunit %28delta subunit%29 of nitrate reductase 1;protein_id=YP_002402409.1;transl_table=11
NC_011748.1	RefSeq	gene	1381150	1381827	.	+	.	ID=gene1350;Name=narI;Dbxref=GeneID:7146970;gbkey=Gene;gene=narI;locus_tag=EC55989_1325
NC_011748.1	RefSeq	CDS	1381150	1381827	.	+	0	ID=cds1266;Name=YP_002402410.1;Parent=gene1350;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 75114694%2C 89384449%2C 92121125%2C 2832376%2C 3053688%3B Product type c : carrier;Dbxref=Genbank:YP_002402410.1,GeneID:7146970;gbkey=CDS;product=nitrate reductase 1 subunit gamma %28cytochrome b%28NR%29%29;protein_id=YP_002402410.1;transl_table=11
NC_011748.1	RefSeq	gene	1382011	1382181	.	-	.	ID=gene1351;Name=rtt;Dbxref=GeneID:7144541;gbkey=Gene;gene=rtt;locus_tag=EC55989_misc_RNA_27
NC_011748.1	RefSeq	transcript	1382011	1382181	.	-	.	ID=rna56;Parent=gene1351;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 1840671%3B Product type n : RNA;Dbxref=GeneID:7144541;gbkey=misc_RNA;product=Rtt
NC_011748.1	RefSeq	exon	1382011	1382181	.	-	.	ID=id100;Parent=rna56;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 1840671%3B Product type n : RNA;Dbxref=GeneID:7144541;gbkey=misc_RNA;product=Rtt
NC_011748.1	RefSeq	gene	1382189	1382273	.	-	.	ID=gene1352;Name=EC55989_tRNA84;Dbxref=GeneID:7147556;gbkey=Gene;locus_tag=EC55989_tRNA84
NC_011748.1	RefSeq	tRNA	1382189	1382273	.	-	.	ID=rna57;Dbxref=GeneID:7147556;gbkey=tRNA;product=tRNA-Tyr
NC_011748.1	RefSeq	exon	1382189	1382273	.	-	.	ID=id101;Parent=rna57;Dbxref=GeneID:7147556;gbkey=tRNA;product=tRNA-Tyr
NC_011748.1	RefSeq	gene	1382308	1382392	.	-	.	ID=gene1353;Name=EC55989_tRNA83;Dbxref=GeneID:7145399;gbkey=Gene;locus_tag=EC55989_tRNA83
NC_011748.1	RefSeq	tRNA	1382308	1382392	.	-	.	ID=rna58;Dbxref=GeneID:7145399;gbkey=tRNA;product=tRNA-Tyr
NC_011748.1	RefSeq	exon	1382308	1382392	.	-	.	ID=id102;Parent=rna58;Dbxref=GeneID:7145399;gbkey=tRNA;product=tRNA-Tyr
NC_011748.1	RefSeq	gene	1382552	1383394	.	-	.	ID=gene1354;Name=purU;Dbxref=GeneID:7145398;gbkey=Gene;gene=purU;locus_tag=EC55989_1327
NC_011748.1	RefSeq	CDS	1382552	1383394	.	-	0	ID=cds1267;Name=YP_002402412.1;Parent=gene1354;Note=produces formate from formyl-tetrahydrofolate which is the major source of formate for PurT in de novo purine nucleotide biosynthesis%3B has a role in one-carbon metabolism%3B forms a homohexamer%3B activated by methionine and inhibited by glycine;Dbxref=Genbank:YP_002402412.1,GeneID:7145398;gbkey=CDS;product=formyltetrahydrofolate deformylase;protein_id=YP_002402412.1;transl_table=11
NC_011748.1	RefSeq	gene	1383444	1383902	.	-	.	ID=gene1355;Name=ychJ;Dbxref=GeneID:7147305;gbkey=Gene;gene=ychJ;locus_tag=EC55989_1328
NC_011748.1	RefSeq	CDS	1383444	1383902	.	-	0	ID=cds1268;Name=YP_002402413.1;Parent=gene1355;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402413.1,GeneID:7147305;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402413.1;transl_table=11
NC_011748.1	RefSeq	gene	1383976	1384920	.	+	.	ID=gene1356;Name=rssA;Dbxref=GeneID:7148331;gbkey=Gene;gene=rssA;locus_tag=EC55989_1329
NC_011748.1	RefSeq	CDS	1383976	1384920	.	+	0	ID=cds1269;Name=YP_002402414.1;Parent=gene1356;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002402414.1,GeneID:7148331;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402414.1;transl_table=11
NC_011748.1	RefSeq	gene	1385012	1386025	.	+	.	ID=gene1357;Name=rssB;Dbxref=GeneID:7147541;gbkey=Gene;gene=rssB;locus_tag=EC55989_1330
NC_011748.1	RefSeq	CDS	1385012	1386025	.	+	0	ID=cds1270;Name=YP_002402415.1;Parent=gene1357;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 10339606%2C 12912910%2C 9495753%3B Product type r : regulator;Dbxref=Genbank:YP_002402415.1,GeneID:7147541;gbkey=CDS;product=response regulator of RpoS;protein_id=YP_002402415.1;transl_table=11
NC_011748.1	RefSeq	gene	1386227	1387135	.	+	.	ID=gene1358;Name=galU;Dbxref=GeneID:7147542;gbkey=Gene;gene=galU;locus_tag=EC55989_1331
NC_011748.1	RefSeq	CDS	1386227	1387135	.	+	0	ID=cds1271;Name=YP_002402416.1;Parent=gene1358;Note=together with GalF subunit composes the UTP--glucose-1-phosphate uridylyltransferase%2C an enzyme that catalyzes the formation of UDP-glucose from UTP and alpha-D-glucose 1-phosphate%3B regulates cellular levels of UDP-glucose;Dbxref=Genbank:YP_002402416.1,GeneID:7147542;gbkey=CDS;product=UTP-glucose-1-phosphate uridylyltransferase;protein_id=YP_002402416.1;transl_table=11
NC_011748.1	RefSeq	gene	1387279	1387692	.	-	.	ID=gene1359;Name=hns;Dbxref=GeneID:7146255;gbkey=Gene;gene=hns;locus_tag=EC55989_1332
NC_011748.1	RefSeq	CDS	1387279	1387692	.	-	0	ID=cds1272;Name=YP_002402417.1;Parent=gene1359;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 89056689%2C 94335643%2C 95267838%2C 95286558%2C 99355427%2C 2404280%2C 11298273%3B Product type r : regulator;Dbxref=Genbank:YP_002402417.1,GeneID:7146255;gbkey=CDS;product=global DNA-binding transcriptional dual regulator H-NS;protein_id=YP_002402417.1;transl_table=11
NC_011748.1	RefSeq	gene	1388298	1388915	.	+	.	ID=gene1360;Name=tdk;Dbxref=GeneID:7146448;gbkey=Gene;gene=tdk;locus_tag=EC55989_1333
NC_011748.1	RefSeq	CDS	1388298	1388915	.	+	0	ID=cds1273;Name=YP_002402418.1;Parent=gene1360;Note=catalyzes the formation of thymidine 5%27-phosphate from thymidine;Dbxref=Genbank:YP_002402418.1,GeneID:7146448;gbkey=CDS;product=thymidine kinase;protein_id=YP_002402418.1;transl_table=11
NC_011748.1	RefSeq	gene	1389197	1389739	.	-	.	ID=gene1361;Name=EC55989_1334;Dbxref=GeneID:7147772;gbkey=Gene;locus_tag=EC55989_1334
NC_011748.1	RefSeq	CDS	1389197	1389739	.	-	0	ID=cds1274;Name=YP_002402419.1;Parent=gene1361;Dbxref=Genbank:YP_002402419.1,GeneID:7147772;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402419.1;transl_table=11
NC_011748.1	RefSeq	gene	1389743	1389973	.	-	.	ID=gene1362;Name=EC55989_1335;Dbxref=GeneID:7144542;gbkey=Gene;locus_tag=EC55989_1335
NC_011748.1	RefSeq	CDS	1389743	1389973	.	-	0	ID=cds1275;Name=YP_002402420.1;Parent=gene1362;Dbxref=Genbank:YP_002402420.1,GeneID:7144542;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402420.1;transl_table=11
NC_011748.1	RefSeq	gene	1389912	1390097	.	-	.	ID=gene1363;Name=ychG;Dbxref=GeneID:7144543;gbkey=Gene;gene=ychG;locus_tag=EC55989_1336
NC_011748.1	RefSeq	CDS	1389912	1390097	.	-	0	ID=cds1276;Name=YP_002402421.1;Parent=gene1363;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402421.1,GeneID:7144543;gbkey=CDS;product=transposase;protein_id=YP_002402421.1;transl_table=11
NC_011748.1	RefSeq	gene	1390221	1392896	.	-	.	ID=gene1364;Name=adhE;Dbxref=GeneID:7148329;gbkey=Gene;gene=adhE;locus_tag=EC55989_1337
NC_011748.1	RefSeq	CDS	1390221	1392896	.	-	0	ID=cds1277;Name=YP_002402422.1;Parent=gene1364;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 12783863%2C 4301680%2C 89291706%2C 91200315%3B Product type e : enzyme;Dbxref=Genbank:YP_002402422.1,GeneID:7148329;gbkey=CDS;product=bifunctional acetaldehyde-CoA%2Falcohol dehydrogenase;protein_id=YP_002402422.1;transl_table=11
NC_011748.1	RefSeq	gene	1393373	1394020	.	+	.	ID=gene1365;Name=ychE;Dbxref=GeneID:7145455;gbkey=Gene;gene=ychE;locus_tag=EC55989_1338
NC_011748.1	RefSeq	CDS	1393373	1394020	.	+	0	ID=cds1278;Name=YP_002402423.1;Parent=gene1365;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002402423.1,GeneID:7145455;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402423.1;transl_table=11
NC_011748.1	RefSeq	gene	1394178	1394339	.	-	.	ID=gene1366;Name=EC55989_1339;Dbxref=GeneID:7148327;gbkey=Gene;locus_tag=EC55989_1339;pseudo=true
NC_011748.1	RefSeq	region	1394178	1394339	.	-	.	ID=id103;Note=fragment of conserved hypothetical protein %28partial%29%3BEvidence 7 : Gene remnant;Dbxref=GeneID:7148327;gbkey=misc_feature
NC_011748.1	RefSeq	gene	1394758	1396389	.	+	.	ID=gene1367;Name=oppA;Dbxref=GeneID:7144544;gbkey=Gene;gene=oppA;locus_tag=EC55989_1340
NC_011748.1	RefSeq	CDS	1394758	1396389	.	+	0	ID=cds1279;Name=YP_002402424.1;Parent=gene1367;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 20256410%2C 86111605%2C 90256748%2C 92325017%2C 2015910%2C 9298646%2C 9600841%2C 2187863%2C 8740179%2C 9740056%2C 10972807%3B Product type t : transporter;Dbxref=Genbank:YP_002402424.1,GeneID:7144544;gbkey=CDS;product=oligopeptide transporter subunit %3B periplasmic-binding component of ABC superfamily;protein_id=YP_002402424.1;transl_table=11
NC_011748.1	RefSeq	gene	1396475	1397395	.	+	.	ID=gene1368;Name=oppB;Dbxref=GeneID:7147075;gbkey=Gene;gene=oppB;locus_tag=EC55989_1341
NC_011748.1	RefSeq	CDS	1396475	1397395	.	+	0	ID=cds1280;Name=YP_002402425.1;Parent=gene1368;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 86111606%2C 93106975%2C 2187863%3B Product type t : transporter;Dbxref=Genbank:YP_002402425.1,GeneID:7147075;gbkey=CDS;product=oligopeptide transporter permease;protein_id=YP_002402425.1;transl_table=11
NC_011748.1	RefSeq	gene	1397410	1398318	.	+	.	ID=gene1369;Name=oppC;Dbxref=GeneID:7147076;gbkey=Gene;gene=oppC;locus_tag=EC55989_1342
NC_011748.1	RefSeq	CDS	1397410	1398318	.	+	0	ID=cds1281;Name=YP_002402426.1;Parent=gene1369;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 86111606%3B Product type t : transporter;Dbxref=Genbank:YP_002402426.1,GeneID:7147076;gbkey=CDS;product=oligopeptide transporter subunit %3B membrane component of ABC superfamily;protein_id=YP_002402426.1;transl_table=11
NC_011748.1	RefSeq	STS	1397795	1398096	.	+	.	ID=id104;Dbxref=UniSTS:25469,GeneID:7147076;gbkey=STS
NC_011748.1	RefSeq	gene	1398330	1399343	.	+	.	ID=gene1370;Name=oppD;Dbxref=GeneID:7147077;gbkey=Gene;gene=oppD;locus_tag=EC55989_1343
NC_011748.1	RefSeq	CDS	1398330	1399343	.	+	0	ID=cds1282;Name=YP_002402427.1;Parent=gene1370;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 86111606%3B Product type t : transporter;Dbxref=Genbank:YP_002402427.1,GeneID:7147077;gbkey=CDS;product=oligopeptide ABC transporter ATP-binding protein;protein_id=YP_002402427.1;transl_table=11
NC_011748.1	RefSeq	gene	1399340	1400344	.	+	.	ID=gene1371;Name=oppF;Dbxref=GeneID:7147078;gbkey=Gene;gene=oppF;locus_tag=EC55989_1344
NC_011748.1	RefSeq	CDS	1399340	1400344	.	+	0	ID=cds1283;Name=YP_002402428.1;Parent=gene1371;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 86111606%3B Product type t : transporter;Dbxref=Genbank:YP_002402428.1,GeneID:7147078;gbkey=CDS;product=oligopeptide transporter subunit %3B ATP-binding component of ABC superfamily;protein_id=YP_002402428.1;transl_table=11
NC_011748.1	RefSeq	gene	1400397	1400726	.	-	.	ID=gene1372;Name=yciU;Dbxref=GeneID:7147079;gbkey=Gene;gene=yciU;locus_tag=EC55989_1345
NC_011748.1	RefSeq	CDS	1400397	1400726	.	-	0	ID=cds1284;Name=YP_002402429.1;Parent=gene1372;Note=highly acidic protein%3B the structure of the Haemophilus influenzae protein shows similarity to uracil DNA glycosylase inhibitor %28Ugi%29%3B binds heat-unstable protein %28HU-alpha%29 which is a histone-like protein;Dbxref=Genbank:YP_002402429.1,GeneID:7147079;gbkey=CDS;product=dsDNA-mimic protein;protein_id=YP_002402429.1;transl_table=11
NC_011748.1	RefSeq	gene	1400761	1402221	.	-	.	ID=gene1373;Name=cls;Dbxref=GeneID:7148352;gbkey=Gene;gene=cls;locus_tag=EC55989_1346
NC_011748.1	RefSeq	CDS	1400761	1402221	.	-	0	ID=cds1285;Name=YP_002402430.1;Parent=gene1373;Note=catalyzes the transfer of a phosphatidyl group to phosphodidylglycerol to form cardiolipin %28diphosphatidylglycerol%29;Dbxref=Genbank:YP_002402430.1,GeneID:7148352;gbkey=CDS;product=cardiolipin synthetase;protein_id=YP_002402430.1;transl_table=11
NC_011748.1	RefSeq	gene	1402253	1402537	.	+	.	ID=gene1374;Name=EC55989_1347;Dbxref=GeneID:7145727;gbkey=Gene;locus_tag=EC55989_1347
NC_011748.1	RefSeq	CDS	1402253	1402537	.	+	0	ID=cds1286;Name=YP_002402431.1;Parent=gene1374;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402431.1,GeneID:7145727;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402431.1;transl_table=11
NC_011748.1	RefSeq	gene	1402592	1403845	.	-	.	ID=gene1375;Name=kch;Dbxref=GeneID:7144545;gbkey=Gene;gene=kch;locus_tag=EC55989_1348
NC_011748.1	RefSeq	CDS	1402592	1403845	.	-	0	ID=cds1287;Name=YP_002402432.1;Parent=gene1375;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 12220501%2C 12912904%2C 94224769%2C 98319474%3B Product type t : transporter;Dbxref=Genbank:YP_002402432.1,GeneID:7144545;gbkey=CDS;product=voltage-gated potassium channel;protein_id=YP_002402432.1;transl_table=11
NC_011748.1	RefSeq	gene	1404145	1404441	.	-	.	ID=gene1376;Name=yciI;Dbxref=GeneID:7146650;gbkey=Gene;gene=yciI;locus_tag=EC55989_1349
NC_011748.1	RefSeq	CDS	1404145	1404441	.	-	0	ID=cds1288;Name=YP_002402433.1;Parent=gene1376;Note=unknown function%3B YciI from Haemophilus influenzae presents crystal structure similarity to a muconolactone isomerase%2C but does not seem to catalyze any of the predicted reactions based on sequence and structure similarity;Dbxref=Genbank:YP_002402433.1,GeneID:7146650;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402433.1;transl_table=11
NC_011748.1	RefSeq	gene	1404665	1405384	.	+	.	ID=gene1377;Name=tonB;Dbxref=GeneID:7148346;gbkey=Gene;gene=tonB;locus_tag=EC55989_1350
NC_011748.1	RefSeq	CDS	1404665	1405384	.	+	0	ID=cds1289;Name=YP_002402434.1;Parent=gene1377;Note=membrane spanning protein in TonB-ExbB-ExbD complex%3B transduces proton motive force of the cytoplasmic membrane to outer membrane transporters%3B involved in the transport of ron-siderophore complexes%2C vitamin B12 and colicins;Dbxref=Genbank:YP_002402434.1,GeneID:7148346;gbkey=CDS;product=transporter;protein_id=YP_002402434.1;transl_table=11
NC_011748.1	RefSeq	gene	1405424	1405822	.	-	.	ID=gene1378;Name=yciA;Dbxref=GeneID:7147817;gbkey=Gene;gene=yciA;locus_tag=EC55989_1351
NC_011748.1	RefSeq	CDS	1405424	1405822	.	-	0	ID=cds1290;Name=YP_002402435.1;Parent=gene1378;Note=YciA%3B hydrolase that catalyzes the hydrolysis of the thioester bond in palmitoyl-CoA and malonyl-CoA%3B member of the the acyl coenzyme A hydrolase family of proteins;Dbxref=Genbank:YP_002402435.1,GeneID:7147817;gbkey=CDS;product=acyl-CoA thioester hydrolase;protein_id=YP_002402435.1;transl_table=11
NC_011748.1	RefSeq	gene	1405927	1406466	.	-	.	ID=gene1379;Name=yciB;Dbxref=GeneID:7148336;gbkey=Gene;gene=yciB;locus_tag=EC55989_1352
NC_011748.1	RefSeq	CDS	1405927	1406466	.	-	0	ID=cds1291;Name=YP_002402436.1;Parent=gene1379;Note=Involved in cell division%3B probably involved in intracellular septation;Dbxref=Genbank:YP_002402436.1,GeneID:7148336;gbkey=CDS;product=intracellular septation protein A;protein_id=YP_002402436.1;transl_table=11
NC_011748.1	RefSeq	gene	1406496	1407239	.	-	.	ID=gene1380;Name=yciC;Dbxref=GeneID:7148337;gbkey=Gene;gene=yciC;locus_tag=EC55989_1353
NC_011748.1	RefSeq	CDS	1406496	1407239	.	-	0	ID=cds1292;Name=YP_002402437.1;Parent=gene1380;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002402437.1,GeneID:7148337;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402437.1;transl_table=11
NC_011748.1	RefSeq	gene	1407596	1408234	.	+	.	ID=gene1381;Name=ompW;Dbxref=GeneID:7148338;gbkey=Gene;gene=ompW;locus_tag=EC55989_1354
NC_011748.1	RefSeq	CDS	1407596	1408234	.	+	0	ID=cds1293;Name=YP_002402438.1;Parent=gene1381;Note=receptor for colicin S4;Dbxref=Genbank:YP_002402438.1,GeneID:7148338;gbkey=CDS;product=outer membrane protein W;protein_id=YP_002402438.1;transl_table=11
NC_011748.1	RefSeq	gene	1408280	1409410	.	-	.	ID=gene1382;Name=EC55989_1355;Dbxref=GeneID:7147071;gbkey=Gene;locus_tag=EC55989_1355
NC_011748.1	RefSeq	CDS	1408280	1409410	.	-	0	ID=cds1294;Name=YP_002402439.1;Parent=gene1382;Note=Evidence 2b : Function of strongly homologous gene%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402439.1,GeneID:7147071;gbkey=CDS;product=phage integrase;protein_id=YP_002402439.1;transl_table=11
NC_011748.1	RefSeq	gene	1409388	1409636	.	-	.	ID=gene1383;Name=EC55989_1356;Dbxref=GeneID:7144546;gbkey=Gene;locus_tag=EC55989_1356
NC_011748.1	RefSeq	CDS	1409388	1409636	.	-	0	ID=cds1295;Name=YP_002402440.1;Parent=gene1383;Note=Evidence 2b : Function of strongly homologous gene%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402440.1,GeneID:7144546;gbkey=CDS;product=phage excisionase;protein_id=YP_002402440.1;transl_table=11
NC_011748.1	RefSeq	gene	1409701	1412172	.	-	.	ID=gene1384;Name=EC55989_1357;Dbxref=GeneID:7144547;gbkey=Gene;locus_tag=EC55989_1357
NC_011748.1	RefSeq	CDS	1409701	1412172	.	-	0	ID=cds1296;Name=YP_002402441.1;Parent=gene1384;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402441.1,GeneID:7144547;gbkey=CDS;product=exonuclease from phage origin;protein_id=YP_002402441.1;transl_table=11
NC_011748.1	RefSeq	gene	1412265	1412456	.	-	.	ID=gene1385;Name=ydfD;Dbxref=GeneID:7144548;gbkey=Gene;gene=ydfD;locus_tag=EC55989_1358
NC_011748.1	RefSeq	CDS	1412265	1412456	.	-	0	ID=cds1297;Name=YP_002402442.1;Parent=gene1385;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402442.1,GeneID:7144548;gbkey=CDS;product=Qin prophage;protein_id=YP_002402442.1;transl_table=11
NC_011748.1	RefSeq	gene	1412453	1412746	.	-	.	ID=gene1386;Name=EC55989_1359;Dbxref=GeneID:7148432;gbkey=Gene;locus_tag=EC55989_1359
NC_011748.1	RefSeq	CDS	1412453	1412746	.	-	0	ID=cds1298;Name=YP_002402443.1;Parent=gene1386;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402443.1,GeneID:7148432;gbkey=CDS;product=regulator of cell division encoded by prophage;protein_id=YP_002402443.1;transl_table=11
NC_011748.1	RefSeq	gene	1412816	1412868	.	-	.	ID=gene1387;Name=dicF;Dbxref=GeneID:7144549;gbkey=Gene;gene=dicF;locus_tag=EC55989_misc_RNA_28
NC_011748.1	RefSeq	transcript	1412816	1412868	.	-	.	ID=rna59;Parent=gene1387;Dbxref=GeneID:7144549;gbkey=misc_RNA;product=DicF
NC_011748.1	RefSeq	exon	1412816	1412868	.	-	.	ID=id105;Parent=rna59;Dbxref=GeneID:7144549;gbkey=misc_RNA;product=DicF
NC_011748.1	RefSeq	gene	1412991	1413206	.	+	.	ID=gene1388;Name=EC55989_1360;Dbxref=GeneID:7145912;gbkey=Gene;locus_tag=EC55989_1360
NC_011748.1	RefSeq	CDS	1412991	1413206	.	+	0	ID=cds1299;Name=YP_002402444.1;Parent=gene1388;Note=Evidence 6 : Doubtful CDS;Dbxref=Genbank:YP_002402444.1,GeneID:7145912;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402444.1;transl_table=11
NC_011748.1	RefSeq	gene	1413136	1413402	.	+	.	ID=gene1389;Name=EC55989_1361;Dbxref=GeneID:7144550;gbkey=Gene;locus_tag=EC55989_1361
NC_011748.1	RefSeq	CDS	1413136	1413402	.	+	0	ID=cds1300;Name=YP_002402445.1;Parent=gene1389;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402445.1,GeneID:7144550;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402445.1;transl_table=11
NC_011748.1	RefSeq	gene	1413391	1413741	.	-	.	ID=gene1390;Name=EC55989_1362;Dbxref=GeneID:7144551;gbkey=Gene;locus_tag=EC55989_1362
NC_011748.1	RefSeq	CDS	1413391	1413741	.	-	0	ID=cds1301;Name=YP_002402446.1;Parent=gene1390;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402446.1,GeneID:7144551;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402446.1;transl_table=11
NC_011748.1	RefSeq	gene	1413741	1414049	.	-	.	ID=gene1391;Name=EC55989_1363;Dbxref=GeneID:7144552;gbkey=Gene;locus_tag=EC55989_1363
NC_011748.1	RefSeq	CDS	1413741	1414049	.	-	0	ID=cds1302;Name=YP_002402447.1;Parent=gene1391;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402447.1,GeneID:7144552;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402447.1;transl_table=11
NC_011748.1	RefSeq	gene	1414086	1414544	.	-	.	ID=gene1392;Name=dicA;Dbxref=GeneID:7144553;gbkey=Gene;gene=dicA;locus_tag=EC55989_1364
NC_011748.1	RefSeq	CDS	1414086	1414544	.	-	0	ID=cds1303;Name=YP_002402448.1;Parent=gene1392;Note=The transcriptional repressor of DicA %28divison cell%29 has a hypothetical DNA binding domain. It represses the transcription of dicB and dicC%2C but its specific role in cellular replication and mode of action are still unknown.;Dbxref=Genbank:YP_002402448.1,GeneID:7144553;gbkey=CDS;product=transcriptional repressor DicA;protein_id=YP_002402448.1;transl_table=11
NC_011748.1	RefSeq	gene	1414544	1414798	.	+	.	ID=gene1393;Name=EC55989_1365;Dbxref=GeneID:7145907;gbkey=Gene;locus_tag=EC55989_1365
NC_011748.1	RefSeq	CDS	1414544	1414798	.	+	0	ID=cds1304;Name=YP_002402449.1;Parent=gene1393;Note=Evidence 2b : Function of strongly homologous gene%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402449.1,GeneID:7145907;gbkey=CDS;product=DNA-binding transcriptional regulator DicC;protein_id=YP_002402449.1;transl_table=11
NC_011748.1	RefSeq	gene	1414782	1415303	.	+	.	ID=gene1394;Name=EC55989_1366;Dbxref=GeneID:7144554;gbkey=Gene;locus_tag=EC55989_1366
NC_011748.1	RefSeq	CDS	1414782	1415303	.	+	0	ID=cds1305;Name=YP_002402450.1;Parent=gene1394;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402450.1,GeneID:7144554;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402450.1;transl_table=11
NC_011748.1	RefSeq	gene	1415230	1416249	.	+	.	ID=gene1395;Name=EC55989_1367;Dbxref=GeneID:7144555;gbkey=Gene;locus_tag=EC55989_1367
NC_011748.1	RefSeq	CDS	1415230	1416249	.	+	0	ID=cds1306;Name=YP_002402451.1;Parent=gene1395;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402451.1,GeneID:7144555;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402451.1;transl_table=11
NC_011748.1	RefSeq	gene	1416290	1416712	.	+	.	ID=gene1396;Name=EC55989_1368;Dbxref=GeneID:7144556;gbkey=Gene;locus_tag=EC55989_1368
NC_011748.1	RefSeq	CDS	1416290	1416712	.	+	0	ID=cds1307;Name=YP_002402452.1;Parent=gene1396;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402452.1,GeneID:7144556;gbkey=CDS;product=phage protein;protein_id=YP_002402452.1;transl_table=11
NC_011748.1	RefSeq	gene	1416965	1417864	.	+	.	ID=gene1397;Name=EC55989_1369;Dbxref=GeneID:7144557;gbkey=Gene;locus_tag=EC55989_1369
NC_011748.1	RefSeq	CDS	1416965	1417864	.	+	0	ID=cds1308;Name=YP_002402453.1;Parent=gene1397;Note=Evidence 5 : No homology to any previously reported sequences%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402453.1,GeneID:7144557;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402453.1;transl_table=11
NC_011748.1	RefSeq	gene	1418179	1418838	.	-	.	ID=gene1398;Name=ymfD;Dbxref=GeneID:7144558;gbkey=Gene;gene=ymfD;locus_tag=EC55989_1370
NC_011748.1	RefSeq	CDS	1418179	1418838	.	-	0	ID=cds1309;Name=YP_002402454.1;Parent=gene1398;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402454.1,GeneID:7144558;gbkey=CDS;product=S-adenosyl-L-methionine-dependent methyltransferases;protein_id=YP_002402454.1;transl_table=11
NC_011748.1	RefSeq	gene	1418845	1419552	.	-	.	ID=gene1399;Name=EC55989_1371;Dbxref=GeneID:7149274;gbkey=Gene;locus_tag=EC55989_1371
NC_011748.1	RefSeq	CDS	1418845	1419552	.	-	0	ID=cds1310;Name=YP_002402455.1;Parent=gene1399;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402455.1,GeneID:7149274;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402455.1;transl_table=11
NC_011748.1	RefSeq	gene	1419725	1419892	.	-	.	ID=gene1400;Name=EC55989_1372;Dbxref=GeneID:7144559;gbkey=Gene;locus_tag=EC55989_1372
NC_011748.1	RefSeq	CDS	1419725	1419892	.	-	0	ID=cds1311;Name=YP_002402456.1;Parent=gene1400;Note=Evidence 5 : No homology to any previously reported sequences%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402456.1,GeneID:7144559;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402456.1;transl_table=11
NC_011748.1	RefSeq	gene	1420655	1420906	.	+	.	ID=gene1401;Name=rem;Dbxref=GeneID:7144560;gbkey=Gene;gene=rem;locus_tag=EC55989_1373
NC_011748.1	RefSeq	CDS	1420655	1420906	.	+	0	ID=cds1312;Name=YP_002402457.1;Parent=gene1401;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 2990907%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402457.1,GeneID:7144560;gbkey=CDS;product=Qin prophage;protein_id=YP_002402457.1;transl_table=11
NC_011748.1	RefSeq	gene	1421253	1422302	.	+	.	ID=gene1402;Name=ydfU;Dbxref=GeneID:7147371;gbkey=Gene;gene=ydfU;locus_tag=EC55989_1374
NC_011748.1	RefSeq	CDS	1421253	1422302	.	+	0	ID=cds1313;Name=YP_002402458.1;Parent=gene1402;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402458.1,GeneID:7147371;gbkey=CDS;product=Qin prophage;protein_id=YP_002402458.1;transl_table=11
NC_011748.1	RefSeq	gene	1422308	1422508	.	+	.	ID=gene1403;Name=EC55989_1375;Dbxref=GeneID:7148443;gbkey=Gene;locus_tag=EC55989_1375
NC_011748.1	RefSeq	CDS	1422308	1422508	.	+	0	ID=cds1314;Name=YP_002402459.1;Parent=gene1403;Note=Evidence 6 : Doubtful CDS;Dbxref=Genbank:YP_002402459.1,GeneID:7148443;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402459.1;transl_table=11
NC_011748.1	RefSeq	gene	1422315	1422674	.	+	.	ID=gene1404;Name=EC55989_1376;Dbxref=GeneID:7144561;gbkey=Gene;locus_tag=EC55989_1376
NC_011748.1	RefSeq	CDS	1422315	1422674	.	+	0	ID=cds1315;Name=YP_002402460.1;Parent=gene1404;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402460.1,GeneID:7144561;gbkey=CDS;product=crossover junction endodeoxyribonuclease rusA %28Holliday junction nuclease rusA%29 %28Holliday juction resolvase%29 %28Gp67%29;protein_id=YP_002402460.1;transl_table=11
NC_011748.1	RefSeq	gene	1422665	1423360	.	+	.	ID=gene1405;Name=Q;Dbxref=GeneID:7144562;gbkey=Gene;gene=Q;locus_tag=EC55989_1377
NC_011748.1	RefSeq	CDS	1422665	1423360	.	+	0	ID=cds1316;Name=YP_002402461.1;Parent=gene1405;Note=Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402461.1,GeneID:7144562;gbkey=CDS;product=Antitermination protein Q;protein_id=YP_002402461.1;transl_table=11
NC_011748.1	RefSeq	gene	1423432	1424271	.	+	.	ID=gene1406;Name=EC55989_1378;Dbxref=GeneID:7147326;gbkey=Gene;locus_tag=EC55989_1378
NC_011748.1	RefSeq	CDS	1423432	1424271	.	+	0	ID=cds1317;Name=YP_002402462.1;Parent=gene1406;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402462.1,GeneID:7147326;gbkey=CDS;product=protein kinase from phage origin;protein_id=YP_002402462.1;transl_table=11
NC_011748.1	RefSeq	gene	1424268	1425011	.	+	.	ID=gene1407;Name=EC55989_1379;Dbxref=GeneID:7144563;gbkey=Gene;locus_tag=EC55989_1379
NC_011748.1	RefSeq	CDS	1424268	1425011	.	+	0	ID=cds1318;Name=YP_002402463.1;Parent=gene1407;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402463.1,GeneID:7144563;gbkey=CDS;product=protein phosphatase from phage origin;protein_id=YP_002402463.1;transl_table=11
NC_011748.1	RefSeq	gene	1425122	1425448	.	+	.	ID=gene1408;Name=EC55989_1380;Dbxref=GeneID:7144564;gbkey=Gene;locus_tag=EC55989_1380;pseudo=true
NC_011748.1	RefSeq	region	1425122	1425448	.	+	.	ID=id106;Note=fragment of  DNA adenine methyltransferase %28 DNA methylase%29 from phage origin %28partial%29%3BEvidence 7 : Gene remnant%3B Product type h : extrachromosomal origin;Dbxref=GeneID:7144564;gbkey=misc_feature
NC_011748.1	RefSeq	gene	1425498	1425573	.	+	.	ID=gene1409;Name=EC55989_tRNA18;Dbxref=GeneID:7144565;gbkey=Gene;locus_tag=EC55989_tRNA18
NC_011748.1	RefSeq	tRNA	1425498	1425573	.	+	.	ID=rna60;Dbxref=GeneID:7144565;gbkey=tRNA;product=tRNA-Met
NC_011748.1	RefSeq	exon	1425498	1425573	.	+	.	ID=id107;Parent=rna60;Dbxref=GeneID:7144565;gbkey=tRNA;product=tRNA-Met
NC_011748.1	RefSeq	gene	1425671	1425747	.	+	.	ID=gene1410;Name=EC55989_tRNA19;Dbxref=GeneID:7145326;gbkey=Gene;locus_tag=EC55989_tRNA19
NC_011748.1	RefSeq	tRNA	1425671	1425747	.	+	.	ID=rna61;Dbxref=GeneID:7145326;gbkey=tRNA;product=tRNA-Arg
NC_011748.1	RefSeq	exon	1425671	1425747	.	+	.	ID=id108;Parent=rna61;Dbxref=GeneID:7145326;gbkey=tRNA;product=tRNA-Arg
NC_011748.1	RefSeq	gene	1426724	1428580	.	+	.	ID=gene1411;Name=EC55989_1381;Dbxref=GeneID:7145327;gbkey=Gene;locus_tag=EC55989_1381
NC_011748.1	RefSeq	CDS	1426724	1428580	.	+	0	ID=cds1319;Name=YP_002402464.1;Parent=gene1411;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402464.1,GeneID:7145327;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402464.1;transl_table=11
NC_011748.1	RefSeq	gene	1428653	1428946	.	+	.	ID=gene1412;Name=EC55989_1382;Dbxref=GeneID:7144566;gbkey=Gene;locus_tag=EC55989_1382;pseudo=true
NC_011748.1	RefSeq	region	1428653	1428946	.	+	.	ID=id109;Note=fragment of Lysis protein S homolog from lambdoid prophage %28partial%29%3BEvidence 7 : Gene remnant%3B Product type h : extrachromosomal origin;Dbxref=GeneID:7144566;gbkey=misc_feature
NC_011748.1	RefSeq	gene	1428951	1429265	.	+	.	ID=gene1413;Name=EC55989_1383;Dbxref=GeneID:7144567;gbkey=Gene;locus_tag=EC55989_1383;pseudo=true
NC_011748.1	RefSeq	region	1428951	1429265	.	+	.	ID=id110;Note=fragment of conserved hypothetical protein %28partial%29%3BEvidence 7 : Gene remnant%3B Product type h : extrachromosomal origin;Dbxref=GeneID:7144567;gbkey=misc_feature
NC_011748.1	RefSeq	gene	1429321	1429854	.	+	.	ID=gene1414;Name=ydfQ;Dbxref=GeneID:7144568;gbkey=Gene;gene=ydfQ;locus_tag=EC55989_1384
NC_011748.1	RefSeq	CDS	1429321	1429854	.	+	0	ID=cds1320;Name=YP_002402465.1;Parent=gene1414;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002402465.1,GeneID:7144568;gbkey=CDS;product=membrane-associated lysozyme%3B Qin prophage;protein_id=YP_002402465.1;transl_table=11
NC_011748.1	RefSeq	gene	1429836	1430309	.	+	.	ID=gene1415;Name=Rz;Dbxref=GeneID:7148440;gbkey=Gene;gene=Rz;locus_tag=EC55989_1385
NC_011748.1	RefSeq	CDS	1429836	1430309	.	+	0	ID=cds1321;Name=YP_002402466.1;Parent=gene1415;Note=Evidence 2b : Function of strongly homologous gene%3B PubMedId : 2763468%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402466.1,GeneID:7148440;gbkey=CDS;product=Endopeptidase %28Lysis protein Rz%29;protein_id=YP_002402466.1;transl_table=11
NC_011748.1	RefSeq	gene	1430726	1431346	.	+	.	ID=gene1416;Name=EC55989_1386;Dbxref=GeneID:7147597;gbkey=Gene;locus_tag=EC55989_1386
NC_011748.1	RefSeq	CDS	1430726	1431346	.	+	0	ID=cds1322;Name=YP_002402467.1;Parent=gene1416;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402467.1,GeneID:7147597;gbkey=CDS;product=phage regulatory protein;protein_id=YP_002402467.1;transl_table=11
NC_011748.1	RefSeq	gene	1431288	1432355	.	-	.	ID=gene1417;Name=EC55989_1387;Dbxref=GeneID:7144569;gbkey=Gene;locus_tag=EC55989_1387
NC_011748.1	RefSeq	CDS	1431288	1432355	.	-	0	ID=cds1323;Name=YP_002402468.1;Parent=gene1417;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402468.1,GeneID:7144569;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402468.1;transl_table=11
NC_011748.1	RefSeq	gene	1432470	1432622	.	+	.	ID=gene1418;Name=EC55989_1388;Dbxref=GeneID:7144570;gbkey=Gene;locus_tag=EC55989_1388
NC_011748.1	RefSeq	CDS	1432470	1432622	.	+	0	ID=cds1324;Name=YP_002402469.1;Parent=gene1418;Note=Evidence 6 : Doubtful CDS%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402469.1,GeneID:7144570;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402469.1;transl_table=11
NC_011748.1	RefSeq	gene	1432760	1433308	.	+	.	ID=gene1419;Name=EC55989_1389;Dbxref=GeneID:7144571;gbkey=Gene;locus_tag=EC55989_1389
NC_011748.1	RefSeq	CDS	1432760	1433308	.	+	0	ID=cds1325;Name=YP_002402470.1;Parent=gene1419;Note=Evidence 2b : Function of strongly homologous gene%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402470.1,GeneID:7144571;gbkey=CDS;product=Terminase small subunit %28gp1%29;protein_id=YP_002402470.1;transl_table=11
NC_011748.1	RefSeq	gene	1433238	1435208	.	+	.	ID=gene1420;Name=EC55989_1390;Dbxref=GeneID:7144572;gbkey=Gene;locus_tag=EC55989_1390
NC_011748.1	RefSeq	CDS	1433238	1435208	.	+	0	ID=cds1326;Name=YP_002402471.1;Parent=gene1420;Note=Evidence 2b : Function of strongly homologous gene%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402471.1,GeneID:7144572;gbkey=CDS;product=Terminase large subunit %28Gp2%29;protein_id=YP_002402471.1;transl_table=11
NC_011748.1	RefSeq	gene	1435192	1435398	.	+	.	ID=gene1421;Name=EC55989_1391;Dbxref=GeneID:7144573;gbkey=Gene;locus_tag=EC55989_1391
NC_011748.1	RefSeq	CDS	1435192	1435398	.	+	0	ID=cds1327;Name=YP_002402472.1;Parent=gene1421;Note=Evidence 2b : Function of strongly homologous gene%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402472.1,GeneID:7144573;gbkey=CDS;product=Head stabilization protein %28Head protein GP3%29;protein_id=YP_002402472.1;transl_table=11
NC_011748.1	RefSeq	gene	1435395	1436987	.	+	.	ID=gene1422;Name=EC55989_1392;Dbxref=GeneID:7144574;gbkey=Gene;locus_tag=EC55989_1392
NC_011748.1	RefSeq	CDS	1435395	1436987	.	+	0	ID=cds1328;Name=YP_002402473.1;Parent=gene1422;Note=Evidence 2b : Function of strongly homologous gene%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402473.1,GeneID:7144574;gbkey=CDS;product=Portal protein %28Head protein Gp4%29;protein_id=YP_002402473.1;transl_table=11
NC_011748.1	RefSeq	gene	1436977	1438482	.	+	.	ID=gene1423;Name=EC55989_1393;Dbxref=GeneID:7144575;gbkey=Gene;locus_tag=EC55989_1393
NC_011748.1	RefSeq	CDS	1436977	1438482	.	+	0	ID=cds1329;Name=YP_002402474.1;Parent=gene1423;Note=Evidence 2b : Function of strongly homologous gene%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402474.1,GeneID:7144575;gbkey=CDS;product=Head-tail preconnector protein GP5 %5BContains: Scaffold protein GP6 %28Head protein GP6%29%5D;protein_id=YP_002402474.1;transl_table=11
NC_011748.1	RefSeq	gene	1438519	1438866	.	+	.	ID=gene1424;Name=EC55989_1394;Dbxref=GeneID:7144576;gbkey=Gene;locus_tag=EC55989_1394
NC_011748.1	RefSeq	CDS	1438519	1438866	.	+	0	ID=cds1330;Name=YP_002402475.1;Parent=gene1424;Note=Evidence 2b : Function of strongly homologous gene%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402475.1,GeneID:7144576;gbkey=CDS;product=Head decoration protein %28gpD%29 %28Major capsid protein D%29;protein_id=YP_002402475.1;transl_table=11
NC_011748.1	RefSeq	gene	1438924	1439952	.	+	.	ID=gene1425;Name=EC55989_1395;Dbxref=GeneID:7144577;gbkey=Gene;locus_tag=EC55989_1395
NC_011748.1	RefSeq	CDS	1438924	1439952	.	+	0	ID=cds1331;Name=YP_002402476.1;Parent=gene1425;Note=Evidence 2b : Function of strongly homologous gene%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402476.1,GeneID:7144577;gbkey=CDS;product=Major head protein %28Head protein gp7%29;protein_id=YP_002402476.1;transl_table=11
NC_011748.1	RefSeq	gene	1439956	1440387	.	+	.	ID=gene1426;Name=EC55989_1396;Dbxref=GeneID:7144578;gbkey=Gene;locus_tag=EC55989_1396
NC_011748.1	RefSeq	CDS	1439956	1440387	.	+	0	ID=cds1332;Name=YP_002402477.1;Parent=gene1426;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402477.1,GeneID:7144578;gbkey=CDS;product=phage protein;protein_id=YP_002402477.1;transl_table=11
NC_011748.1	RefSeq	gene	1440380	1440733	.	+	.	ID=gene1427;Name=EC55989_1397;Dbxref=GeneID:7144579;gbkey=Gene;locus_tag=EC55989_1397
NC_011748.1	RefSeq	CDS	1440380	1440733	.	+	0	ID=cds1333;Name=YP_002402478.1;Parent=gene1427;Note=Evidence 2b : Function of strongly homologous gene%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402478.1,GeneID:7144579;gbkey=CDS;product=Tail attachment protein %28Minor capsid protein FII%29;protein_id=YP_002402478.1;transl_table=11
NC_011748.1	RefSeq	gene	1440748	1441323	.	+	.	ID=gene1428;Name=EC55989_1398;Dbxref=GeneID:7144580;gbkey=Gene;locus_tag=EC55989_1398
NC_011748.1	RefSeq	CDS	1440748	1441323	.	+	0	ID=cds1334;Name=YP_002402479.1;Parent=gene1428;Note=Evidence 2b : Function of strongly homologous gene%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402479.1,GeneID:7144580;gbkey=CDS;product=Minor tail protein Z %28GpZ%29;protein_id=YP_002402479.1;transl_table=11
NC_011748.1	RefSeq	gene	1441320	1441715	.	+	.	ID=gene1429;Name=EC55989_1399;Dbxref=GeneID:7144581;gbkey=Gene;locus_tag=EC55989_1399
NC_011748.1	RefSeq	CDS	1441320	1441715	.	+	0	ID=cds1335;Name=YP_002402480.1;Parent=gene1429;Note=Evidence 2b : Function of strongly homologous gene%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402480.1,GeneID:7144581;gbkey=CDS;product=Minor tail protein U;protein_id=YP_002402480.1;transl_table=11
NC_011748.1	RefSeq	gene	1441723	1442475	.	+	.	ID=gene1430;Name=EC55989_1400;Dbxref=GeneID:7144582;gbkey=Gene;locus_tag=EC55989_1400
NC_011748.1	RefSeq	CDS	1441723	1442475	.	+	0	ID=cds1336;Name=YP_002402481.1;Parent=gene1430;Note=Evidence 2b : Function of strongly homologous gene%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402481.1,GeneID:7144582;gbkey=CDS;product=Major tail protein V;protein_id=YP_002402481.1;transl_table=11
NC_011748.1	RefSeq	gene	1442489	1442920	.	+	.	ID=gene1431;Name=EC55989_1401;Dbxref=GeneID:7144583;gbkey=Gene;locus_tag=EC55989_1401
NC_011748.1	RefSeq	CDS	1442489	1442920	.	+	0	ID=cds1337;Name=YP_002402482.1;Parent=gene1431;Note=Evidence 2b : Function of strongly homologous gene%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402482.1,GeneID:7144583;gbkey=CDS;product=Minor tail protein G;protein_id=YP_002402482.1;transl_table=11
NC_011748.1	RefSeq	gene	1442947	1443360	.	+	.	ID=gene1432;Name=EC55989_1402;Dbxref=GeneID:7144584;gbkey=Gene;locus_tag=EC55989_1402
NC_011748.1	RefSeq	CDS	1442947	1443360	.	+	0	ID=cds1338;Name=YP_002402483.1;Parent=gene1432;Note=Evidence 2b : Function of strongly homologous gene%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402483.1,GeneID:7144584;gbkey=CDS;product=Minor tail protein T;protein_id=YP_002402483.1;transl_table=11
NC_011748.1	RefSeq	gene	1443341	1445914	.	+	.	ID=gene1433;Name=EC55989_1403;Dbxref=GeneID:7144585;gbkey=Gene;locus_tag=EC55989_1403
NC_011748.1	RefSeq	CDS	1443341	1445914	.	+	0	ID=cds1339;Name=YP_002402484.1;Parent=gene1433;Note=Evidence 2b : Function of strongly homologous gene%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402484.1,GeneID:7144585;gbkey=CDS;product=Minor tail protein precursor H;protein_id=YP_002402484.1;transl_table=11
NC_011748.1	RefSeq	gene	1445911	1446240	.	+	.	ID=gene1434;Name=EC55989_1405;Dbxref=GeneID:7144586;gbkey=Gene;locus_tag=EC55989_1405
NC_011748.1	RefSeq	CDS	1445911	1446240	.	+	0	ID=cds1340;Name=YP_002402485.1;Parent=gene1434;Note=Evidence 2b : Function of strongly homologous gene%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402485.1,GeneID:7144586;gbkey=CDS;product=Minor tail protein M;protein_id=YP_002402485.1;transl_table=11
NC_011748.1	RefSeq	gene	1446240	1446938	.	+	.	ID=gene1435;Name=EC55989_1406;Dbxref=GeneID:7144587;gbkey=Gene;locus_tag=EC55989_1406
NC_011748.1	RefSeq	CDS	1446240	1446938	.	+	0	ID=cds1341;Name=YP_002402486.1;Parent=gene1435;Note=Evidence 2b : Function of strongly homologous gene%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402486.1,GeneID:7144587;gbkey=CDS;product=Minor tail protein L;protein_id=YP_002402486.1;transl_table=11
NC_011748.1	RefSeq	gene	1446688	1447692	.	+	.	ID=gene1436;Name=EC55989_1407;Dbxref=GeneID:7144588;gbkey=Gene;locus_tag=EC55989_1407
NC_011748.1	RefSeq	CDS	1446688	1447692	.	+	0	ID=cds1342;Name=YP_002402487.1;Parent=gene1436;Note=Evidence 2b : Function of strongly homologous gene%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402487.1,GeneID:7144588;gbkey=CDS;product=tail fiber component K;protein_id=YP_002402487.1;transl_table=11
NC_011748.1	RefSeq	gene	1447590	1448270	.	+	.	ID=gene1437;Name=EC55989_1408;Dbxref=GeneID:7144589;gbkey=Gene;locus_tag=EC55989_1408
NC_011748.1	RefSeq	CDS	1447590	1448270	.	+	0	ID=cds1343;Name=YP_002402488.1;Parent=gene1437;Note=Evidence 2b : Function of strongly homologous gene%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402488.1,GeneID:7144589;gbkey=CDS;product=Tail assembly protein I;protein_id=YP_002402488.1;transl_table=11
NC_011748.1	RefSeq	gene	1448613	1452086	.	+	.	ID=gene1438;Name=EC55989_1409;Dbxref=GeneID:7144590;gbkey=Gene;locus_tag=EC55989_1409
NC_011748.1	RefSeq	CDS	1448613	1452086	.	+	0	ID=cds1344;Name=YP_002402489.1;Parent=gene1438;Note=Evidence 2b : Function of strongly homologous gene%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402489.1,GeneID:7144590;gbkey=CDS;product=Host specificity protein J;protein_id=YP_002402489.1;transl_table=11
NC_011748.1	RefSeq	gene	1452154	1452753	.	+	.	ID=gene1439;Name=EC55989_1410;Dbxref=GeneID:7144591;gbkey=Gene;locus_tag=EC55989_1410
NC_011748.1	RefSeq	CDS	1452154	1452753	.	+	0	ID=cds1345;Name=YP_002402490.1;Parent=gene1439;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402490.1,GeneID:7144591;gbkey=CDS;product=Lom-like outer membrane protein of phage origin;protein_id=YP_002402490.1;transl_table=11
NC_011748.1	RefSeq	gene	1452905	1456075	.	+	.	ID=gene1440;Name=EC55989_1411;Dbxref=GeneID:7144592;gbkey=Gene;locus_tag=EC55989_1411
NC_011748.1	RefSeq	CDS	1452905	1456075	.	+	0	ID=cds1346;Name=YP_002402491.1;Parent=gene1440;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402491.1,GeneID:7144592;gbkey=CDS;product=tail fiber protein;protein_id=YP_002402491.1;transl_table=11
NC_011748.1	RefSeq	gene	1456075	1456659	.	+	.	ID=gene1441;Name=tfaQ;Dbxref=GeneID:7144593;gbkey=Gene;gene=tfaQ;locus_tag=EC55989_1412
NC_011748.1	RefSeq	CDS	1456075	1456659	.	+	0	ID=cds1347;Name=YP_002402492.1;Parent=gene1441;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pf :  factor;Dbxref=Genbank:YP_002402492.1,GeneID:7144593;gbkey=CDS;product=tail fiber chaperone%3B Qin prophage;protein_id=YP_002402492.1;transl_table=11
NC_011748.1	RefSeq	gene	1456714	1457298	.	-	.	ID=gene1442;Name=ybcY;Dbxref=GeneID:7147778;gbkey=Gene;gene=ybcY;locus_tag=EC55989_1413
NC_011748.1	RefSeq	CDS	1456714	1457298	.	-	0	ID=cds1348;Name=YP_002402493.1;Parent=gene1442;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002402493.1,GeneID:7147778;gbkey=CDS;product=AdoMet-dependent methyltransferase%3B DLP12 prophage;protein_id=YP_002402493.1;transl_table=11
NC_011748.1	RefSeq	gene	1457439	1457708	.	+	.	ID=gene1443;Name=EC55989_1414;Dbxref=GeneID:7148137;gbkey=Gene;locus_tag=EC55989_1414
NC_011748.1	RefSeq	CDS	1457439	1457708	.	+	0	ID=cds1349;Name=YP_002402494.1;Parent=gene1443;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402494.1,GeneID:7148137;gbkey=CDS;product=tail fiber assembly protein;protein_id=YP_002402494.1;transl_table=11
NC_011748.1	RefSeq	gene	1458482	1458988	.	-	.	ID=gene1444;Name=yciE;Dbxref=GeneID:7144594;gbkey=Gene;gene=yciE;locus_tag=EC55989_1415
NC_011748.1	RefSeq	CDS	1458482	1458988	.	-	0	ID=cds1350;Name=YP_002402495.1;Parent=gene1444;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 15388941%2C 3058546%2C 8455549;Dbxref=Genbank:YP_002402495.1,GeneID:7144594;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402495.1;transl_table=11
NC_011748.1	RefSeq	gene	1459034	1459534	.	-	.	ID=gene1445;Name=yciF;Dbxref=GeneID:7148339;gbkey=Gene;gene=yciF;locus_tag=EC55989_1416
NC_011748.1	RefSeq	CDS	1459034	1459534	.	-	0	ID=cds1351;Name=YP_002402496.1;Parent=gene1445;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 3058546%2C 8455549;Dbxref=Genbank:YP_002402496.1,GeneID:7148339;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402496.1;transl_table=11
NC_011748.1	RefSeq	gene	1459620	1459799	.	-	.	ID=gene1446;Name=yciG;Dbxref=GeneID:7148341;gbkey=Gene;gene=yciG;locus_tag=EC55989_1417
NC_011748.1	RefSeq	CDS	1459620	1459799	.	-	0	ID=cds1352;Name=YP_002402497.1;Parent=gene1446;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402497.1,GeneID:7148341;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402497.1;transl_table=11
NC_011748.1	RefSeq	gene	1460180	1460986	.	-	.	ID=gene1447;Name=trpA;Dbxref=GeneID:7148343;gbkey=Gene;gene=trpA;locus_tag=EC55989_1418
NC_011748.1	RefSeq	CDS	1460180	1460986	.	-	0	ID=cds1353;Name=YP_002402498.1;Parent=gene1447;Note=catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis;Dbxref=Genbank:YP_002402498.1,GeneID:7148343;gbkey=CDS;product=tryptophan synthase subunit alpha;protein_id=YP_002402498.1;transl_table=11
NC_011748.1	RefSeq	gene	1460986	1462179	.	-	.	ID=gene1448;Name=trpB;Dbxref=GeneID:7147850;gbkey=Gene;gene=trpB;locus_tag=EC55989_1419
NC_011748.1	RefSeq	CDS	1460986	1462179	.	-	0	ID=cds1354;Name=YP_002402499.1;Parent=gene1448;Note=catalyzes the formation of L-tryptophan from L-serine and 1-%28indol-3-yl%29glycerol 3-phosphate;Dbxref=Genbank:YP_002402499.1,GeneID:7147850;gbkey=CDS;product=tryptophan synthase subunit beta;protein_id=YP_002402499.1;transl_table=11
NC_011748.1	RefSeq	gene	1462191	1463549	.	-	.	ID=gene1449;Name=trpC;Dbxref=GeneID:7147851;gbkey=Gene;gene=trpC;locus_tag=EC55989_1420
NC_011748.1	RefSeq	CDS	1462191	1463549	.	-	0	ID=cds1355;Name=YP_002402500.1;Parent=gene1449;Note=monomeric bifunctional protein%3B functions in tryptophan biosynthesis pathway%3B phosphoribosylanthranilate is rearranged to carboxyphenylaminodeoxyribulosephosphate which is then closed to form indole-3-glycerol phosphate;Dbxref=Genbank:YP_002402500.1,GeneID:7147851;gbkey=CDS;product=bifunctional indole-3-glycerol phosphate synthase%2Fphosphoribosylanthranilate isomerase;protein_id=YP_002402500.1;transl_table=11
NC_011748.1	RefSeq	gene	1463553	1465148	.	-	.	ID=gene1450;Name=trpD;Dbxref=GeneID:7147852;gbkey=Gene;gene=trpD;locus_tag=EC55989_1421
NC_011748.1	RefSeq	CDS	1463553	1465148	.	-	0	ID=cds1356;Name=YP_002402501.1;Parent=gene1450;Note=bifunctional anthranilate synthase II%2Fanthranilate phosphoribosyltransferase%3B TrpD%3B forms a heterotetramer with Trp E and the complex catalyzes the formation of anthranilate from chorismate and glutamine%3B also catalyzes the formation of N-%285-phospho-D-ribosyl%29-anthranilate from athranilate and 5-phospho-alpha-D-ribose 1-diphosphate%3B functions in tryptophan biosynthesis;Dbxref=Genbank:YP_002402501.1,GeneID:7147852;gbkey=CDS;product=bifunctional glutamine amidotransferase%2Fanthranilate phosphoribosyltransferase;protein_id=YP_002402501.1;transl_table=11
NC_011748.1	RefSeq	gene	1465148	1466710	.	-	.	ID=gene1451;Name=trpE;Dbxref=GeneID:7147853;gbkey=Gene;gene=trpE;locus_tag=EC55989_1422
NC_011748.1	RefSeq	CDS	1465148	1466710	.	-	0	ID=cds1357;Name=YP_002402502.1;Parent=gene1451;Note=with component II%2C the glutamine amidotransferase%2C catalyzes the formation of anthranilate from chorismate and glutamine;Dbxref=Genbank:YP_002402502.1,GeneID:7147853;gbkey=CDS;product=anthranilate synthase component I;protein_id=YP_002402502.1;transl_table=11
NC_011748.1	RefSeq	gene	1466732	1466825	.	-	.	ID=gene1452;Name=EC55989_misc_RNA_29;Dbxref=GeneID:7147854;gbkey=Gene;locus_tag=EC55989_misc_RNA_29
NC_011748.1	RefSeq	transcript	1466732	1466825	.	-	.	ID=rna62;Parent=gene1452;Dbxref=GeneID:7147854;gbkey=misc_RNA;product=Trp_leader
NC_011748.1	RefSeq	exon	1466732	1466825	.	-	.	ID=id111;Parent=rna62;Dbxref=GeneID:7147854;gbkey=misc_RNA;product=Trp_leader
NC_011748.1	RefSeq	gene	1466802	1466846	.	-	.	ID=gene1453;Name=trpL;Dbxref=GeneID:7145303;gbkey=Gene;gene=trpL;locus_tag=EC55989_5068
NC_011748.1	RefSeq	CDS	1466802	1466846	.	-	0	ID=cds1358;Name=YP_002402503.1;Parent=gene1453;Note=Evidence 1c : Function experimentally demonstrated in the studied genus%3B Product type l : leader peptide;Dbxref=Genbank:YP_002402503.1,GeneID:7145303;gbkey=CDS;product=trp operon leader peptide;protein_id=YP_002402503.1;transl_table=11
NC_011748.1	RefSeq	gene	1466984	1467865	.	+	.	ID=gene1454;Name=yciV;Dbxref=GeneID:7147855;gbkey=Gene;gene=yciV;locus_tag=EC55989_1423
NC_011748.1	RefSeq	CDS	1466984	1467865	.	+	0	ID=cds1359;Name=YP_002402504.1;Parent=gene1454;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402504.1,GeneID:7147855;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402504.1;transl_table=11
NC_011748.1	RefSeq	gene	1467862	1468482	.	+	.	ID=gene1455;Name=yciO;Dbxref=GeneID:7148353;gbkey=Gene;gene=yciO;locus_tag=EC55989_1424
NC_011748.1	RefSeq	CDS	1467862	1468482	.	+	0	ID=cds1360;Name=YP_002402505.1;Parent=gene1455;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402505.1,GeneID:7148353;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402505.1;transl_table=11
NC_011748.1	RefSeq	gene	1468556	1469455	.	+	.	ID=gene1456;Name=rluB;Dbxref=GeneID:7148350;gbkey=Gene;gene=rluB;locus_tag=EC55989_1425
NC_011748.1	RefSeq	CDS	1468556	1469455	.	+	0	ID=cds1361;Name=YP_002402506.1;Parent=gene1456;Note=catalyzes the synthesis of pseudouridine from uracil-2605 in 23S ribosomal RNA;Dbxref=Genbank:YP_002402506.1,GeneID:7148350;gbkey=CDS;product=23S rRNA pseudouridylate synthase B;protein_id=YP_002402506.1;transl_table=11
NC_011748.1	RefSeq	gene	1469495	1470085	.	-	.	ID=gene1457;Name=btuR;Dbxref=GeneID:7147427;gbkey=Gene;gene=btuR;locus_tag=EC55989_1426
NC_011748.1	RefSeq	CDS	1469495	1470085	.	-	0	ID=cds1362;Name=YP_002402507.1;Parent=gene1457;Note=catalyzes the formation of adenosylcob%28III%29yrinic acid a%2Cc-diamide from cob%28I%29yrinic acid a%2Cc-diamide;Dbxref=Genbank:YP_002402507.1,GeneID:7147427;gbkey=CDS;product=cob%28I%29yrinic acid a%2Cc-diamide adenosyltransferase;protein_id=YP_002402507.1;transl_table=11
NC_011748.1	RefSeq	gene	1470082	1470840	.	-	.	ID=gene1458;Name=yciK;Dbxref=GeneID:7145644;gbkey=Gene;gene=yciK;locus_tag=EC55989_1427
NC_011748.1	RefSeq	CDS	1470082	1470840	.	-	0	ID=cds1363;Name=YP_002402508.1;Parent=gene1458;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002402508.1,GeneID:7145644;gbkey=CDS;product=short chain dehydrogenase;protein_id=YP_002402508.1;transl_table=11
NC_011748.1	RefSeq	gene	1470884	1471048	.	-	.	ID=gene1459;Name=EC55989_1428;Dbxref=GeneID:7148347;gbkey=Gene;locus_tag=EC55989_1428
NC_011748.1	RefSeq	CDS	1470884	1471048	.	-	0	ID=cds1364;Name=YP_002402509.1;Parent=gene1459;Note=Evidence 6 : Doubtful CDS;Dbxref=Genbank:YP_002402509.1,GeneID:7148347;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402509.1;transl_table=11
NC_011748.1	RefSeq	gene	1471060	1472109	.	+	.	ID=gene1460;Name=sohB;Dbxref=GeneID:7144595;gbkey=Gene;gene=sohB;locus_tag=EC55989_1429
NC_011748.1	RefSeq	CDS	1471060	1472109	.	+	0	ID=cds1365;Name=YP_002402510.1;Parent=gene1460;Note=SohB%3B periplasmic protein%3B member of the peptidase S49 family;Dbxref=Genbank:YP_002402510.1,GeneID:7144595;gbkey=CDS;product=periplasmic protease;protein_id=YP_002402510.1;transl_table=11
NC_011748.1	RefSeq	gene	1472145	1472396	.	-	.	ID=gene1461;Name=yciN;Dbxref=GeneID:7147675;gbkey=Gene;gene=yciN;locus_tag=EC55989_1430
NC_011748.1	RefSeq	CDS	1472145	1472396	.	-	0	ID=cds1366;Name=YP_002402511.1;Parent=gene1461;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 3029379%2C 7567469%2C 9868784;Dbxref=Genbank:YP_002402511.1,GeneID:7147675;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402511.1;transl_table=11
NC_011748.1	RefSeq	gene	1472441	1472653	.	+	.	ID=gene1462;Name=EC55989_1431;Dbxref=GeneID:7148349;gbkey=Gene;locus_tag=EC55989_1431
NC_011748.1	RefSeq	CDS	1472441	1472653	.	+	0	ID=cds1367;Name=YP_002402512.1;Parent=gene1462;Note=Evidence 6 : Doubtful CDS;Dbxref=Genbank:YP_002402512.1,GeneID:7148349;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402512.1;transl_table=11
NC_011748.1	RefSeq	gene	1472776	1475373	.	+	.	ID=gene1463;Name=topA;Dbxref=GeneID:7144596;gbkey=Gene;gene=topA;locus_tag=EC55989_1432
NC_011748.1	RefSeq	CDS	1472776	1475373	.	+	0	ID=cds1368;Name=YP_002402513.1;Parent=gene1463;Note=catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining%2C maintains net negative superhelicity;Dbxref=Genbank:YP_002402513.1,GeneID:7144596;gbkey=CDS;product=DNA topoisomerase I;protein_id=YP_002402513.1;transl_table=11
NC_011748.1	RefSeq	gene	1475583	1476557	.	+	.	ID=gene1464;Name=cysB;Dbxref=GeneID:7147818;gbkey=Gene;gene=cysB;locus_tag=EC55989_1433
NC_011748.1	RefSeq	CDS	1475583	1476557	.	+	0	ID=cds1369;Name=YP_002402514.1;Parent=gene1464;Note=LysR-type transcriptional regulator%3B contains helix-turn-helix %28HTH%29 motif%3B in Escherichia coli this protein regulates cysteine biosynthesis by controlling expression of the cys regulon%3B autoregulates expression%3B crystal structure of Klebsiella aerogenes showed tetramer formation;Dbxref=Genbank:YP_002402514.1,GeneID:7147818;gbkey=CDS;product=transcriptional regulator CysB;protein_id=YP_002402514.1;transl_table=11
NC_011748.1	RefSeq	gene	1476851	1477015	.	+	.	ID=gene1465;Name=EC55989_1434;Dbxref=GeneID:7145821;gbkey=Gene;locus_tag=EC55989_1434
NC_011748.1	RefSeq	CDS	1476851	1477015	.	+	0	ID=cds1370;Name=YP_002402515.1;Parent=gene1465;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402515.1,GeneID:7145821;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402515.1;transl_table=11
NC_011748.1	RefSeq	gene	1476997	1477185	.	+	.	ID=gene1466;Name=EC55989_1435;Dbxref=GeneID:7144597;gbkey=Gene;locus_tag=EC55989_1435
NC_011748.1	RefSeq	CDS	1476997	1477185	.	+	0	ID=cds1371;Name=YP_002402516.1;Parent=gene1466;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402516.1,GeneID:7144597;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402516.1;transl_table=11
NC_011748.1	RefSeq	gene	1477322	1477504	.	+	.	ID=gene1467;Name=EC55989_1436;Dbxref=GeneID:7144598;gbkey=Gene;locus_tag=EC55989_1436
NC_011748.1	RefSeq	CDS	1477322	1477504	.	+	0	ID=cds1372;Name=YP_002402517.1;Parent=gene1467;Note=Evidence 6 : Doubtful CDS;Dbxref=Genbank:YP_002402517.1,GeneID:7144598;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402517.1;transl_table=11
NC_011748.1	RefSeq	gene	1477558	1480233	.	+	.	ID=gene1468;Name=acnA;Dbxref=GeneID:7144599;gbkey=Gene;gene=acnA;locus_tag=EC55989_1437
NC_011748.1	RefSeq	CDS	1477558	1480233	.	+	0	ID=cds1373;Name=YP_002402518.1;Parent=gene1468;Note=Catalyzes the conversion of citrate to isocitrate;Dbxref=Genbank:YP_002402518.1,GeneID:7144599;gbkey=CDS;product=aconitate hydratase;protein_id=YP_002402518.1;transl_table=11
NC_011748.1	RefSeq	gene	1480297	1480887	.	-	.	ID=gene1469;Name=ribA;Dbxref=GeneID:7145438;gbkey=Gene;gene=ribA;locus_tag=EC55989_1438
NC_011748.1	RefSeq	CDS	1480297	1480887	.	-	0	ID=cds1374;Name=YP_002402519.1;Parent=gene1469;Note=catalyzes the conversion of GTP to formate and 2%2C5-diamino-6-hydroxy-4-%285-phosphoribosylamino%29pyrimidine and diphosphate;Dbxref=Genbank:YP_002402519.1,GeneID:7145438;gbkey=CDS;product=GTP cyclohydrolase II;protein_id=YP_002402519.1;transl_table=11
NC_011748.1	RefSeq	gene	1481057	1481821	.	+	.	ID=gene1470;Name=pgpB;Dbxref=GeneID:7147409;gbkey=Gene;gene=pgpB;locus_tag=EC55989_1439
NC_011748.1	RefSeq	CDS	1481057	1481821	.	+	0	ID=cds1375;Name=YP_002402520.1;Parent=gene1470;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 89033893%2C 92104964%3B Product type e : enzyme;Dbxref=Genbank:YP_002402520.1,GeneID:7147409;gbkey=CDS;product=phosphatidylglycerophosphatase B;protein_id=YP_002402520.1;transl_table=11
NC_011748.1	RefSeq	gene	1481970	1482278	.	+	.	ID=gene1471;Name=yciS;Dbxref=GeneID:7147155;gbkey=Gene;gene=yciS;locus_tag=EC55989_1440
NC_011748.1	RefSeq	CDS	1481970	1482278	.	+	0	ID=cds1376;Name=YP_002402521.1;Parent=gene1471;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002402521.1,GeneID:7147155;gbkey=CDS;product=inner membrane protein;protein_id=YP_002402521.1;transl_table=11
NC_011748.1	RefSeq	gene	1482285	1483454	.	+	.	ID=gene1472;Name=yciM;Dbxref=GeneID:7148351;gbkey=Gene;gene=yciM;locus_tag=EC55989_1441
NC_011748.1	RefSeq	CDS	1482285	1483454	.	+	0	ID=cds1377;Name=YP_002402522.1;Parent=gene1472;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402522.1,GeneID:7148351;gbkey=CDS;product=tetratricopeptide repeat protein;protein_id=YP_002402522.1;transl_table=11
NC_011748.1	RefSeq	gene	1483647	1484384	.	+	.	ID=gene1473;Name=pyrF;Dbxref=GeneID:7148348;gbkey=Gene;gene=pyrF;locus_tag=EC55989_1442
NC_011748.1	RefSeq	CDS	1483647	1484384	.	+	0	ID=cds1378;Name=YP_002402523.1;Parent=gene1473;Note=type 1 subfamily%3B involved in last step of pyrimidine biosynthesis%3B converts orotidine 5%27-phosphate to UMP and carbon dioxide%3B OMP decarboxylase%3B OMPDCase%3B OMPdecase;Dbxref=Genbank:YP_002402523.1,GeneID:7148348;gbkey=CDS;product=orotidine 5%27-phosphate decarboxylase;protein_id=YP_002402523.1;transl_table=11
NC_011748.1	RefSeq	gene	1484384	1484710	.	+	.	ID=gene1474;Name=yciH;Dbxref=GeneID:7147321;gbkey=Gene;gene=yciH;locus_tag=EC55989_1443
NC_011748.1	RefSeq	CDS	1484384	1484710	.	+	0	ID=cds1379;Name=YP_002402524.1;Parent=gene1474;Note=involved in start site selection during the initiation of translation;Dbxref=Genbank:YP_002402524.1,GeneID:7147321;gbkey=CDS;product=translation initiation factor Sui1;protein_id=YP_002402524.1;transl_table=11
NC_011748.1	RefSeq	gene	1484836	1485054	.	-	.	ID=gene1475;Name=osmB;Dbxref=GeneID:7148345;gbkey=Gene;gene=osmB;locus_tag=EC55989_1444
NC_011748.1	RefSeq	CDS	1484836	1485054	.	-	0	ID=cds1380;Name=YP_002402525.1;Parent=gene1475;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 92078100%2C 2644204%3B Product type lp : lipoprotein;Dbxref=Genbank:YP_002402525.1,GeneID:7148345;gbkey=CDS;product=lipoprotein;protein_id=YP_002402525.1;transl_table=11
NC_011748.1	RefSeq	gene	1485323	1486072	.	-	.	ID=gene1476;Name=deoT;Dbxref=GeneID:7147081;gbkey=Gene;gene=deoT;locus_tag=EC55989_1445
NC_011748.1	RefSeq	CDS	1485323	1486072	.	-	0	ID=cds1381;Name=YP_002402526.1;Parent=gene1476;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 16451192%3B Product type r : regulator;Dbxref=Genbank:YP_002402526.1,GeneID:7147081;gbkey=CDS;product=DNA-binding transcriptional repressor%2C DeoR family;protein_id=YP_002402526.1;transl_table=11
NC_011748.1	RefSeq	gene	1486162	1486377	.	-	.	ID=gene1477;Name=EC55989_1446;Dbxref=GeneID:7145891;gbkey=Gene;locus_tag=EC55989_1446
NC_011748.1	RefSeq	CDS	1486162	1486377	.	-	0	ID=cds1382;Name=YP_002402527.1;Parent=gene1477;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402527.1,GeneID:7145891;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402527.1;transl_table=11
NC_011748.1	RefSeq	gene	1486482	1488467	.	-	.	ID=gene1478;Name=gmr;Dbxref=GeneID:7144600;gbkey=Gene;gene=gmr;locus_tag=EC55989_1447
NC_011748.1	RefSeq	CDS	1486482	1488467	.	-	0	ID=cds1383;Name=YP_002402528.1;Parent=gene1478;Note=c-di-GMP phosphodiesterase%3B probably degrades signalling molecule c-di-GMP;Dbxref=Genbank:YP_002402528.1,GeneID:7144600;gbkey=CDS;product=RNase II stability modulator;protein_id=YP_002402528.1;transl_table=11
NC_011748.1	RefSeq	gene	1488702	1490636	.	-	.	ID=gene1479;Name=rnb;Dbxref=GeneID:7146345;gbkey=Gene;gene=rnb;locus_tag=EC55989_1448
NC_011748.1	RefSeq	CDS	1488702	1490636	.	-	0	ID=cds1384;Name=YP_002402529.1;Parent=gene1479;Note=Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3%27 to 5%27 direction;Dbxref=Genbank:YP_002402529.1,GeneID:7146345;gbkey=CDS;product=exoribonuclease II;protein_id=YP_002402529.1;transl_table=11
NC_011748.1	RefSeq	gene	1490704	1491831	.	-	.	ID=gene1480;Name=yciW;Dbxref=GeneID:7147444;gbkey=Gene;gene=yciW;locus_tag=EC55989_1449
NC_011748.1	RefSeq	CDS	1490704	1491831	.	-	0	ID=cds1385;Name=YP_002402530.1;Parent=gene1480;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002402530.1,GeneID:7147444;gbkey=CDS;product=amidase;protein_id=YP_002402530.1;transl_table=11
NC_011748.1	RefSeq	gene	1491976	1492764	.	-	.	ID=gene1481;Name=fabI;Dbxref=GeneID:7148354;gbkey=Gene;gene=fabI;locus_tag=EC55989_1450
NC_011748.1	RefSeq	CDS	1491976	1492764	.	-	0	ID=cds1386;Name=YP_002402531.1;Parent=gene1481;Note=Catalyzes a key regulatory step in fatty acid biosynthesis;Dbxref=Genbank:YP_002402531.1,GeneID:7148354;gbkey=CDS;product=enoyl-%28acyl carrier protein%29 reductase;protein_id=YP_002402531.1;transl_table=11
NC_011748.1	RefSeq	gene	1493134	1493487	.	-	.	ID=gene1482;Name=ycjD;Dbxref=GeneID:7146052;gbkey=Gene;gene=ycjD;locus_tag=EC55989_1451
NC_011748.1	RefSeq	CDS	1493134	1493487	.	-	0	ID=cds1387;Name=YP_002402532.1;Parent=gene1482;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402532.1,GeneID:7146052;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402532.1;transl_table=11
NC_011748.1	RefSeq	gene	1493555	1494361	.	-	.	ID=gene1483;Name=sapF;Dbxref=GeneID:7148355;gbkey=Gene;gene=sapF;locus_tag=EC55989_1452
NC_011748.1	RefSeq	CDS	1493555	1494361	.	-	0	ID=cds1388;Name=YP_002402533.1;Parent=gene1483;Note=Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism%3B PubMedId : 2109018%2C 10720487%2C 9634580%3B Product type t : transporter;Dbxref=Genbank:YP_002402533.1,GeneID:7148355;gbkey=CDS;product=antimicrobial peptide transporter subunit %3B ATP-binding component of ABC superfamily transporter;protein_id=YP_002402533.1;transl_table=11
NC_011748.1	RefSeq	gene	1494363	1495355	.	-	.	ID=gene1484;Name=sapD;Dbxref=GeneID:7147605;gbkey=Gene;gene=sapD;locus_tag=EC55989_1453
NC_011748.1	RefSeq	CDS	1494363	1495355	.	-	0	ID=cds1389;Name=YP_002402534.1;Parent=gene1484;Note=Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism%3B PubMedId : 2109018%2C 10720487%2C 9634580%2C 1987159%3B Product type t : transporter;Dbxref=Genbank:YP_002402534.1,GeneID:7147605;gbkey=CDS;product=antimicrobial peptide transporter subunit%3B ATP-binding component of ABC superfamily transporter;protein_id=YP_002402534.1;transl_table=11
NC_011748.1	RefSeq	gene	1495355	1496245	.	-	.	ID=gene1485;Name=sapC;Dbxref=GeneID:7147604;gbkey=Gene;gene=sapC;locus_tag=EC55989_1454
NC_011748.1	RefSeq	CDS	1495355	1496245	.	-	0	ID=cds1390;Name=YP_002402535.1;Parent=gene1485;Note=Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism%3B PubMedId : 2109018%2C 9634580%3B Product type t : transporter;Dbxref=Genbank:YP_002402535.1,GeneID:7147604;gbkey=CDS;product=antimicrobial peptide transporter subunit %3B permease component of ABC superfamily transporter;protein_id=YP_002402535.1;transl_table=11
NC_011748.1	RefSeq	gene	1496232	1497197	.	-	.	ID=gene1486;Name=sapB;Dbxref=GeneID:7147603;gbkey=Gene;gene=sapB;locus_tag=EC55989_1455
NC_011748.1	RefSeq	CDS	1496232	1497197	.	-	0	ID=cds1391;Name=YP_002402536.1;Parent=gene1486;Note=Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism%3B PubMedId : 2109018%2C 9634580%3B Product type t : transporter;Dbxref=Genbank:YP_002402536.1,GeneID:7147603;gbkey=CDS;product=antimicrobial peptide transporter subunit %3B permease component of ABC superfamily transporter;protein_id=YP_002402536.1;transl_table=11
NC_011748.1	RefSeq	gene	1497194	1498837	.	-	.	ID=gene1487;Name=sapA;Dbxref=GeneID:7147602;gbkey=Gene;gene=sapA;locus_tag=EC55989_1456
NC_011748.1	RefSeq	CDS	1497194	1498837	.	-	0	ID=cds1392;Name=YP_002402537.1;Parent=gene1487;Note=Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism%3B PubMedId : 2109018%2C 9634580%3B Product type t : transporter;Dbxref=Genbank:YP_002402537.1,GeneID:7147602;gbkey=CDS;product=antimicrobial peptide transporter subunit%3B periplasmic-binding component of ABC superfamily transporter;protein_id=YP_002402537.1;transl_table=11
NC_011748.1	RefSeq	gene	1499149	1499394	.	-	.	ID=gene1488;Name=ymjA;Dbxref=GeneID:7147601;gbkey=Gene;gene=ymjA;locus_tag=EC55989_1457
NC_011748.1	RefSeq	CDS	1499149	1499394	.	-	0	ID=cds1393;Name=YP_002402538.1;Parent=gene1488;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402538.1,GeneID:7147601;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402538.1;transl_table=11
NC_011748.1	RefSeq	gene	1499528	1500913	.	-	.	ID=gene1489;Name=puuP;Dbxref=GeneID:7149282;gbkey=Gene;gene=puuP;locus_tag=EC55989_1458
NC_011748.1	RefSeq	CDS	1499528	1500913	.	-	0	ID=cds1394;Name=YP_002402539.1;Parent=gene1489;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 15590624%3B Product type t : transporter;Dbxref=Genbank:YP_002402539.1,GeneID:7149282;gbkey=CDS;product=putrescine importer;protein_id=YP_002402539.1;transl_table=11
NC_011748.1	RefSeq	gene	1501216	1502634	.	-	.	ID=gene1490;Name=puuA;Dbxref=GeneID:7147313;gbkey=Gene;gene=puuA;locus_tag=EC55989_1459
NC_011748.1	RefSeq	CDS	1501216	1502634	.	-	0	ID=cds1395;Name=YP_002402540.1;Parent=gene1490;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 15590624%3B Product type e : enzyme;Dbxref=Genbank:YP_002402540.1,GeneID:7147313;gbkey=CDS;product=gamma-Glu-putrescine synthase;protein_id=YP_002402540.1;transl_table=11
NC_011748.1	RefSeq	gene	1502846	1503610	.	+	.	ID=gene1491;Name=puuD;Dbxref=GeneID:7147308;gbkey=Gene;gene=puuD;locus_tag=EC55989_1460
NC_011748.1	RefSeq	CDS	1502846	1503610	.	+	0	ID=cds1396;Name=YP_002402541.1;Parent=gene1491;Note=catalyzes the degradation of gamma-glutamyl-gamma-aminobutyrate into glutamate and gamma-aminobutyrate;Dbxref=Genbank:YP_002402541.1,GeneID:7147308;gbkey=CDS;product=gamma-glutamyl-gamma-aminobutyrate hydrolase;protein_id=YP_002402541.1;transl_table=11
NC_011748.1	RefSeq	gene	1503637	1504194	.	+	.	ID=gene1492;Name=puuR;Dbxref=GeneID:7147311;gbkey=Gene;gene=puuR;locus_tag=EC55989_1461
NC_011748.1	RefSeq	CDS	1503637	1504194	.	+	0	ID=cds1397;Name=YP_002402542.1;Parent=gene1492;Note=regulates genes involved in putrescine degradation;Dbxref=Genbank:YP_002402542.1,GeneID:7147311;gbkey=CDS;product=DNA-binding transcriptional repressor PuuR;protein_id=YP_002402542.1;transl_table=11
NC_011748.1	RefSeq	gene	1504469	1505956	.	+	.	ID=gene1493;Name=puuC;Dbxref=GeneID:7147314;gbkey=Gene;gene=puuC;locus_tag=EC55989_1462
NC_011748.1	RefSeq	CDS	1504469	1505956	.	+	0	ID=cds1398;Name=YP_002402543.1;Parent=gene1493;Note=catalyzes the formation of gamma-glutamyl-gamma-aminobutyrate from Gamma-glutamyl-gamma-aminobutyraldehyde%3B involved in putrescine degradation;Dbxref=Genbank:YP_002402543.1,GeneID:7147314;gbkey=CDS;product=gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase;protein_id=YP_002402543.1;transl_table=11
NC_011748.1	RefSeq	gene	1505958	1507238	.	+	.	ID=gene1494;Name=puuB;Dbxref=GeneID:7147310;gbkey=Gene;gene=puuB;locus_tag=EC55989_1463
NC_011748.1	RefSeq	CDS	1505958	1507238	.	+	0	ID=cds1399;Name=YP_002402544.1;Parent=gene1494;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 9150200%2C 15590624%3B Product type e : enzyme;Dbxref=Genbank:YP_002402544.1,GeneID:7147310;gbkey=CDS;product=gamma-Glu-putrescine oxidase;protein_id=YP_002402544.1;transl_table=11
NC_011748.1	RefSeq	gene	1507276	1508541	.	+	.	ID=gene1495;Name=puuE;Dbxref=GeneID:7147309;gbkey=Gene;gene=puuE;locus_tag=EC55989_1464
NC_011748.1	RefSeq	CDS	1507276	1508541	.	+	0	ID=cds1400;Name=YP_002402545.1;Parent=gene1495;Note=putrescine-inducible GABA aminotransferase%3B catalyzes the formation of glutamate and succinate semialdehyde from 4-aminobutyrate and 2-oxoglutarate;Dbxref=Genbank:YP_002402545.1,GeneID:7147309;gbkey=CDS;product=4-aminobutyrate aminotransferase;protein_id=YP_002402545.1;transl_table=11
NC_011748.1	RefSeq	gene	1508661	1509638	.	-	.	ID=gene1496;Name=pspF;Dbxref=GeneID:7147312;gbkey=Gene;gene=pspF;locus_tag=EC55989_1465
NC_011748.1	RefSeq	CDS	1508661	1509638	.	-	0	ID=cds1401;Name=YP_002402546.1;Parent=gene1496;Note=transcriptional activator for pspABCE which are induced in response to phage proteins%2C membrane altering stresses%2C and impaired proton expor;Dbxref=Genbank:YP_002402546.1,GeneID:7147312;gbkey=CDS;product=phage shock protein operon transcriptional activator;protein_id=YP_002402546.1;transl_table=11
NC_011748.1	RefSeq	STS	1508934	1509091	.	+	.	ID=id112;Dbxref=UniSTS:9831;gbkey=STS
NC_011748.1	RefSeq	gene	1509805	1510473	.	+	.	ID=gene1497;Name=pspA;Dbxref=GeneID:7147275;gbkey=Gene;gene=pspA;locus_tag=EC55989_1467
NC_011748.1	RefSeq	CDS	1509805	1510473	.	+	0	ID=cds1402;Name=YP_002402547.1;Parent=gene1497;Note=involved in maintaining membrane potential under membrane stress conditions%3B also acts as a negative transcriptional regulator of the phage shock protein %28psp%29 operon%28pspABCDE%29 by regulating the transcriptional activator PspF;Dbxref=Genbank:YP_002402547.1,GeneID:7147275;gbkey=CDS;product=phage shock protein PspA;protein_id=YP_002402547.1;transl_table=11
NC_011748.1	RefSeq	gene	1510527	1510751	.	+	.	ID=gene1498;Name=pspB;Dbxref=GeneID:7147270;gbkey=Gene;gene=pspB;locus_tag=EC55989_1468
NC_011748.1	RefSeq	CDS	1510527	1510751	.	+	0	ID=cds1403;Name=YP_002402548.1;Parent=gene1498;Note=acts together with PspC to induce psp operon during infection with phage%2C exposure to ethanol or osmotic shock%3B forms a complex with PspA and C%3B PspC is required for PspAB binding;Dbxref=Genbank:YP_002402548.1,GeneID:7147270;gbkey=CDS;product=phage shock protein B;protein_id=YP_002402548.1;transl_table=11
NC_011748.1	RefSeq	gene	1510751	1511110	.	+	.	ID=gene1499;Name=pspC;Dbxref=GeneID:7147271;gbkey=Gene;gene=pspC;locus_tag=EC55989_1469
NC_011748.1	RefSeq	CDS	1510751	1511110	.	+	0	ID=cds1404;Name=YP_002402549.1;Parent=gene1499;Note=with PsbB forms toxin%2Fantitoxin pair%3B activates the psp operon in response to phage infection%2C exposure to ethanol or osmotic shock;Dbxref=Genbank:YP_002402549.1,GeneID:7147271;gbkey=CDS;product=DNA-binding transcriptional activator PspC;protein_id=YP_002402549.1;transl_table=11
NC_011748.1	RefSeq	gene	1511119	1511340	.	+	.	ID=gene1500;Name=pspD;Dbxref=GeneID:7147272;gbkey=Gene;gene=pspD;locus_tag=EC55989_1470
NC_011748.1	RefSeq	CDS	1511119	1511340	.	+	0	ID=cds1405;Name=YP_002402550.1;Parent=gene1500;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 91295203%2C 97303082%3B Product type ph : phenotype;Dbxref=Genbank:YP_002402550.1,GeneID:7147272;gbkey=CDS;product=peripheral inner membrane phage-shock protein;protein_id=YP_002402550.1;transl_table=11
NC_011748.1	RefSeq	gene	1511415	1511729	.	+	.	ID=gene1501;Name=pspE;Dbxref=GeneID:7147273;gbkey=Gene;gene=pspE;locus_tag=EC55989_1471
NC_011748.1	RefSeq	CDS	1511415	1511729	.	+	0	ID=cds1406;Name=YP_002402551.1;Parent=gene1501;Note=rhodanese%3B catalyzes the formation of thiocyanate from thiosulfate and hydrogen cyanide;Dbxref=Genbank:YP_002402551.1,GeneID:7147273;gbkey=CDS;product=thiosulfate:cyanide sulfurtransferase;protein_id=YP_002402551.1;transl_table=11
NC_011748.1	RefSeq	gene	1511941	1513620	.	+	.	ID=gene1502;Name=ycjM;Dbxref=GeneID:7147274;gbkey=Gene;gene=ycjM;locus_tag=EC55989_1472
NC_011748.1	RefSeq	CDS	1511941	1513620	.	+	0	ID=cds1407;Name=YP_002402552.1;Parent=gene1502;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002402552.1,GeneID:7147274;gbkey=CDS;product=glucosyltransferase;protein_id=YP_002402552.1;transl_table=11
NC_011748.1	RefSeq	gene	1513634	1514926	.	+	.	ID=gene1503;Name=ycjN;Dbxref=GeneID:7148358;gbkey=Gene;gene=ycjN;locus_tag=EC55989_1473
NC_011748.1	RefSeq	CDS	1513634	1514926	.	+	0	ID=cds1408;Name=YP_002402553.1;Parent=gene1503;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002402553.1,GeneID:7148358;gbkey=CDS;product=sugar transporter subunit: periplasmic-binding component of ABC superfamily transporter;protein_id=YP_002402553.1;transl_table=11
NC_011748.1	RefSeq	gene	1514947	1515828	.	+	.	ID=gene1504;Name=ycjO;Dbxref=GeneID:7148359;gbkey=Gene;gene=ycjO;locus_tag=EC55989_1474
NC_011748.1	RefSeq	CDS	1514947	1515828	.	+	0	ID=cds1409;Name=YP_002402554.1;Parent=gene1504;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002402554.1,GeneID:7148359;gbkey=CDS;product=sugar transporter subunit: permease component of ABC superfamily transporter;protein_id=YP_002402554.1;transl_table=11
NC_011748.1	RefSeq	gene	1515815	1516657	.	+	.	ID=gene1505;Name=ycjP;Dbxref=GeneID:7148360;gbkey=Gene;gene=ycjP;locus_tag=EC55989_1475
NC_011748.1	RefSeq	CDS	1515815	1516657	.	+	0	ID=cds1410;Name=YP_002402555.1;Parent=gene1505;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002402555.1,GeneID:7148360;gbkey=CDS;product=sugar transporter subunit: permease component of ABC superfamily transporter;protein_id=YP_002402555.1;transl_table=11
NC_011748.1	RefSeq	gene	1516688	1517740	.	+	.	ID=gene1506;Name=ycjQ;Dbxref=GeneID:7148361;gbkey=Gene;gene=ycjQ;locus_tag=EC55989_1476
NC_011748.1	RefSeq	CDS	1516688	1517740	.	+	0	ID=cds1411;Name=YP_002402556.1;Parent=gene1506;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002402556.1,GeneID:7148361;gbkey=CDS;product=oxidoreductase%2C Zn-dependent and NAD%28P%29-binding;protein_id=YP_002402556.1;transl_table=11
NC_011748.1	RefSeq	gene	1517758	1518546	.	+	.	ID=gene1507;Name=ycjR;Dbxref=GeneID:7148362;gbkey=Gene;gene=ycjR;locus_tag=EC55989_1477
NC_011748.1	RefSeq	CDS	1517758	1518546	.	+	0	ID=cds1412;Name=YP_002402557.1;Parent=gene1507;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002402557.1,GeneID:7148362;gbkey=CDS;product=isomerase%2Fepimerase;protein_id=YP_002402557.1;transl_table=11
NC_011748.1	RefSeq	gene	1518556	1519305	.	+	.	ID=gene1508;Name=ycjS;Dbxref=GeneID:7148363;gbkey=Gene;gene=ycjS;locus_tag=EC55989_1478;pseudo=true
NC_011748.1	RefSeq	region	1518556	1519305	.	+	.	ID=id113;Note=fragment of  oxidoreductase%2C NADH-binding %28part 1%29%3BEvidence 7 : Gene remnant%3B Product type pe :  enzyme;Dbxref=GeneID:7148363;gbkey=misc_feature
NC_011748.1	RefSeq	gene	1519348	1519611	.	+	.	ID=gene1509;Name=ycjS;Dbxref=GeneID:7148364;gbkey=Gene;gene=ycjS;locus_tag=EC55989_1479;pseudo=true
NC_011748.1	RefSeq	region	1519348	1519611	.	+	.	ID=id114;Note=fragment of  oxidoreductase%2C NADH-binding %28part 2%29%3BEvidence 7 : Gene remnant%3B Product type pe :  enzyme;Dbxref=GeneID:7148364;gbkey=misc_feature
NC_011748.1	RefSeq	gene	1519608	1521875	.	+	.	ID=gene1510;Name=ycjT;Dbxref=GeneID:7148365;gbkey=Gene;gene=ycjT;locus_tag=EC55989_1480
NC_011748.1	RefSeq	CDS	1519608	1521875	.	+	0	ID=cds1413;Name=YP_002402558.1;Parent=gene1510;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002402558.1,GeneID:7148365;gbkey=CDS;product=glycosyl hydrolase%2Fphosphorylase;protein_id=YP_002402558.1;transl_table=11
NC_011748.1	RefSeq	gene	1521872	1522531	.	+	.	ID=gene1511;Name=ycjU;Dbxref=GeneID:7148366;gbkey=Gene;gene=ycjU;locus_tag=EC55989_1481
NC_011748.1	RefSeq	CDS	1521872	1522531	.	+	0	ID=cds1414;Name=YP_002402559.1;Parent=gene1511;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 11972617%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002402559.1,GeneID:7148366;gbkey=CDS;product=glucose-1-phosphate phosphodismutase%2C beta-phosphoglucomutase;protein_id=YP_002402559.1;transl_table=11
NC_011748.1	RefSeq	gene	1522545	1523627	.	+	.	ID=gene1512;Name=ycjV;Dbxref=GeneID:7148367;gbkey=Gene;gene=ycjV;locus_tag=EC55989_1482
NC_011748.1	RefSeq	CDS	1522545	1523627	.	+	0	ID=cds1415;Name=YP_002402560.1;Parent=gene1512;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002402560.1,GeneID:7148367;gbkey=CDS;product=sugar transporter subunit: ATP-binding component of ABC superfamily transporter;protein_id=YP_002402560.1;transl_table=11
NC_011748.1	RefSeq	gene	1523672	1524577	.	+	.	ID=gene1513;Name=ompG;Dbxref=GeneID:7148368;gbkey=Gene;gene=ompG;locus_tag=EC55989_1483
NC_011748.1	RefSeq	CDS	1523672	1524577	.	+	0	ID=cds1416;Name=YP_002402561.1;Parent=gene1513;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 20464934%2C 89327119%2C 9721282%3B Product type t : transporter;Dbxref=Genbank:YP_002402561.1,GeneID:7148368;gbkey=CDS;product=outer membrane porin;protein_id=YP_002402561.1;transl_table=11
NC_011748.1	RefSeq	gene	1524688	1525686	.	-	.	ID=gene1514;Name=ycjW;Dbxref=GeneID:7147068;gbkey=Gene;gene=ycjW;locus_tag=EC55989_1484
NC_011748.1	RefSeq	CDS	1524688	1525686	.	-	0	ID=cds1417;Name=YP_002402562.1;Parent=gene1514;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pr :  regulator;Dbxref=Genbank:YP_002402562.1,GeneID:7147068;gbkey=CDS;product=DNA-binding transcriptional regulator;protein_id=YP_002402562.1;transl_table=11
NC_011748.1	RefSeq	gene	1525841	1527238	.	+	.	ID=gene1515;Name=ycjX;Dbxref=GeneID:7148369;gbkey=Gene;gene=ycjX;locus_tag=EC55989_1485
NC_011748.1	RefSeq	CDS	1525841	1527238	.	+	0	ID=cds1418;Name=YP_002402563.1;Parent=gene1515;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402563.1,GeneID:7148369;gbkey=CDS;product=nucleoside triphosphate hydrolase domain;protein_id=YP_002402563.1;transl_table=11
NC_011748.1	RefSeq	gene	1527235	1528296	.	+	.	ID=gene1516;Name=ycjF;Dbxref=GeneID:7148370;gbkey=Gene;gene=ycjF;locus_tag=EC55989_1486
NC_011748.1	RefSeq	CDS	1527235	1528296	.	+	0	ID=cds1419;Name=YP_002402564.1;Parent=gene1516;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002402564.1,GeneID:7148370;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402564.1;transl_table=11
NC_011748.1	RefSeq	gene	1528444	1529985	.	+	.	ID=gene1517;Name=tyrR;Dbxref=GeneID:7148356;gbkey=Gene;gene=tyrR;locus_tag=EC55989_1487
NC_011748.1	RefSeq	CDS	1528444	1529985	.	+	0	ID=cds1420;Name=YP_002402565.1;Parent=gene1517;Note=regulates genes involved in the biosynthesis and transport of aromatic amino acids;Dbxref=Genbank:YP_002402565.1,GeneID:7148356;gbkey=CDS;product=DNA-binding transcriptional regulator TyrR;protein_id=YP_002402565.1;transl_table=11
NC_011748.1	RefSeq	gene	1530029	1530535	.	-	.	ID=gene1518;Name=tpx;Dbxref=GeneID:7147884;gbkey=Gene;gene=tpx;locus_tag=EC55989_1488
NC_011748.1	RefSeq	CDS	1530029	1530535	.	-	0	ID=cds1421;Name=YP_002402566.1;Parent=gene1518;Note=antioxidant activity%3B thioredoxin-dependent thiol peroxidase%3B forms homodimers in solution%3B shows substrate specificity to alkyl hydroperoxides%3B periplasmic protein;Dbxref=Genbank:YP_002402566.1,GeneID:7147884;gbkey=CDS;product=thiol peroxidase;protein_id=YP_002402566.1;transl_table=11
NC_011748.1	RefSeq	gene	1530654	1531619	.	+	.	ID=gene1519;Name=ycjG;Dbxref=GeneID:7147833;gbkey=Gene;gene=ycjG;locus_tag=EC55989_1489
NC_011748.1	RefSeq	CDS	1530654	1531619	.	+	0	ID=cds1422;Name=YP_002402567.1;Parent=gene1519;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 11747447%2C 11747448%2C 7499381%3B Product type e : enzyme;Dbxref=Genbank:YP_002402567.1,GeneID:7147833;gbkey=CDS;product=L-Ala-D%2FL-Glu epimerase;protein_id=YP_002402567.1;transl_table=11
NC_011748.1	RefSeq	gene	1531594	1532382	.	-	.	ID=gene1520;Name=mpaA;Dbxref=GeneID:7148357;gbkey=Gene;gene=mpaA;locus_tag=EC55989_1490
NC_011748.1	RefSeq	CDS	1531594	1532382	.	-	0	ID=cds1423;Name=YP_002402568.1;Parent=gene1520;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 12511517%3B Product type e : enzyme;Dbxref=Genbank:YP_002402568.1,GeneID:7148357;gbkey=CDS;product=murein peptide amidase A;protein_id=YP_002402568.1;transl_table=11
NC_011748.1	RefSeq	gene	1532423	1532587	.	-	.	ID=gene1521;Name=ymjC;Dbxref=GeneID:7146890;gbkey=Gene;gene=ymjC;locus_tag=EC55989_1491;pseudo=true
NC_011748.1	RefSeq	region	1532423	1532587	.	-	.	ID=id115;Note=fragment of  NAD%28P%29 binding enzyme %28partial%29%3BEvidence 7 : Gene remnant%3B Product type pe :  enzyme;Dbxref=GeneID:7146890;gbkey=misc_feature
NC_011748.1	RefSeq	gene	1532658	1533590	.	-	.	ID=gene1522;Name=ycjY;Dbxref=GeneID:7149283;gbkey=Gene;gene=ycjY;locus_tag=EC55989_1492
NC_011748.1	RefSeq	CDS	1532658	1533590	.	-	0	ID=cds1424;Name=YP_002402569.1;Parent=gene1522;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002402569.1,GeneID:7149283;gbkey=CDS;product=hydrolase;protein_id=YP_002402569.1;transl_table=11
NC_011748.1	RefSeq	gene	1533716	1534615	.	+	.	ID=gene1523;Name=ycjZ;Dbxref=GeneID:7148371;gbkey=Gene;gene=ycjZ;locus_tag=EC55989_1493
NC_011748.1	RefSeq	CDS	1533716	1534615	.	+	0	ID=cds1425;Name=YP_002402570.1;Parent=gene1523;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 17366475%3B Product type pr :  regulator;Dbxref=Genbank:YP_002402570.1,GeneID:7148371;gbkey=CDS;product=nucleic acid-binding regulator;protein_id=YP_002402570.1;transl_table=11
NC_011748.1	RefSeq	gene	1534952	1536565	.	+	.	ID=gene1524;Name=mppA;Dbxref=GeneID:7148372;gbkey=Gene;gene=mppA;locus_tag=EC55989_1494
NC_011748.1	RefSeq	CDS	1534952	1536565	.	+	0	ID=cds1426;Name=YP_002402571.1;Parent=gene1524;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 10438753%2C 9495761%3B Product type t : transporter;Dbxref=Genbank:YP_002402571.1,GeneID:7148372;gbkey=CDS;product=murein tripeptide %28L-ala-gamma-D-glutamyl-meso-DAP%29 transporter subunit %3B periplasmic-binding component of ABC superfamily;protein_id=YP_002402571.1;transl_table=11
NC_011748.1	RefSeq	gene	1536616	1537647	.	-	.	ID=gene1525;Name=ynaI;Dbxref=GeneID:7146892;gbkey=Gene;gene=ynaI;locus_tag=EC55989_1495
NC_011748.1	RefSeq	CDS	1536616	1537647	.	-	0	ID=cds1427;Name=YP_002402572.1;Parent=gene1525;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002402572.1,GeneID:7146892;gbkey=CDS;product=inner membrane protein;protein_id=YP_002402572.1;transl_table=11
NC_011748.1	RefSeq	gene	1537891	1538148	.	+	.	ID=gene1526;Name=ynaJ;Dbxref=GeneID:7149284;gbkey=Gene;gene=ynaJ;locus_tag=EC55989_1496
NC_011748.1	RefSeq	CDS	1537891	1538148	.	+	0	ID=cds1428;Name=YP_002402573.1;Parent=gene1526;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002402573.1,GeneID:7149284;gbkey=CDS;product=inner membrane protein;protein_id=YP_002402573.1;transl_table=11
NC_011748.1	RefSeq	gene	1538198	1539148	.	-	.	ID=gene1527;Name=uspE;Dbxref=GeneID:7149285;gbkey=Gene;gene=uspE;locus_tag=EC55989_1497
NC_011748.1	RefSeq	CDS	1538198	1539148	.	-	0	ID=cds1429;Name=YP_002402574.1;Parent=gene1527;Note=with UspC and UspD is involved in resistance to UV irradiation;Dbxref=Genbank:YP_002402574.1,GeneID:7149285;gbkey=CDS;product=universal stress protein UspE;protein_id=YP_002402574.1;transl_table=11
NC_011748.1	RefSeq	gene	1539300	1540052	.	-	.	ID=gene1528;Name=fnr;Dbxref=GeneID:7147929;gbkey=Gene;gene=fnr;locus_tag=EC55989_1498
NC_011748.1	RefSeq	CDS	1539300	1540052	.	-	0	ID=cds1430;Name=YP_002402575.1;Parent=gene1528;Note=Global transcription factor that controls the expression of over 100 target genes in response to anoxia;Dbxref=Genbank:YP_002402575.1,GeneID:7147929;gbkey=CDS;product=fumarate%2Fnitrate reduction transcriptional regulator;protein_id=YP_002402575.1;transl_table=11
NC_011748.1	RefSeq	gene	1540247	1540762	.	-	.	ID=gene1529;Name=ogt;Dbxref=GeneID:7146165;gbkey=Gene;gene=ogt;locus_tag=EC55989_1499
NC_011748.1	RefSeq	CDS	1540247	1540762	.	-	0	ID=cds1431;Name=YP_002402576.1;Parent=gene1529;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 88067749%2C 91161525%2C 94252990%2C 98125595%2C 1520330%3B Product type e : enzyme;Dbxref=Genbank:YP_002402576.1,GeneID:7146165;gbkey=CDS;product=O-6-alkylguanine-DNA:cysteine-protein methyltransferase;protein_id=YP_002402576.1;transl_table=11
NC_011748.1	RefSeq	gene	1540773	1542299	.	-	.	ID=gene1530;Name=abgT;Dbxref=GeneID:7147064;gbkey=Gene;gene=abgT;locus_tag=EC55989_1500
NC_011748.1	RefSeq	CDS	1540773	1542299	.	-	0	ID=cds1432;Name=YP_002402577.1;Parent=gene1530;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 9829935%2C 2825131%2C 7567469%3B Product type t : transporter;Dbxref=Genbank:YP_002402577.1,GeneID:7147064;gbkey=CDS;product=aminobenzoyl-glutamate transporter;protein_id=YP_002402577.1;transl_table=11
NC_011748.1	RefSeq	gene	1542229	1542423	.	-	.	ID=gene1531;Name=EC55989_1501;Dbxref=GeneID:7145426;gbkey=Gene;locus_tag=EC55989_1501
NC_011748.1	RefSeq	CDS	1542229	1542423	.	-	0	ID=cds1433;Name=YP_002402578.1;Parent=gene1531;Note=Evidence 6 : Doubtful CDS;Dbxref=Genbank:YP_002402578.1,GeneID:7145426;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402578.1;transl_table=11
NC_011748.1	RefSeq	gene	1542336	1543781	.	-	.	ID=gene1532;Name=abgB;Dbxref=GeneID:7144601;gbkey=Gene;gene=abgB;locus_tag=EC55989_1502
NC_011748.1	RefSeq	CDS	1542336	1543781	.	-	0	ID=cds1434;Name=YP_002402579.1;Parent=gene1532;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 9829935%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002402579.1,GeneID:7144601;gbkey=CDS;product=peptidase%2C aminobenzoyl-glutamate utilization protein;protein_id=YP_002402579.1;transl_table=11
NC_011748.1	RefSeq	gene	1543781	1545091	.	-	.	ID=gene1533;Name=abgA;Dbxref=GeneID:7145424;gbkey=Gene;gene=abgA;locus_tag=EC55989_1503
NC_011748.1	RefSeq	CDS	1543781	1545091	.	-	0	ID=cds1435;Name=YP_002402580.1;Parent=gene1533;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 9829935%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002402580.1,GeneID:7145424;gbkey=CDS;product=peptidase%2C para-aminobenzoyl-glutamate utilization protein;protein_id=YP_002402580.1;transl_table=11
NC_011748.1	RefSeq	gene	1545267	1546175	.	+	.	ID=gene1534;Name=abgR;Dbxref=GeneID:7145423;gbkey=Gene;gene=abgR;locus_tag=EC55989_1504
NC_011748.1	RefSeq	CDS	1545267	1546175	.	+	0	ID=cds1436;Name=YP_002402581.1;Parent=gene1534;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 9829935%3B Product type r : regulator;Dbxref=Genbank:YP_002402581.1,GeneID:7145423;gbkey=CDS;product=DNA-binding transcriptional regulator;protein_id=YP_002402581.1;transl_table=11
NC_011748.1	RefSeq	gene	1546178	1546335	.	+	.	ID=gene1535;Name=isrA;Dbxref=GeneID:7145425;gbkey=Gene;gene=isrA;locus_tag=EC55989_misc_RNA_30
NC_011748.1	RefSeq	transcript	1546178	1546335	.	+	.	ID=rna63;Parent=gene1535;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 12069726%3B Product type n : RNA;Dbxref=GeneID:7145425;gbkey=misc_RNA;product=IsrA
NC_011748.1	RefSeq	exon	1546178	1546335	.	+	.	ID=id116;Parent=rna63;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 12069726%3B Product type n : RNA;Dbxref=GeneID:7145425;gbkey=misc_RNA;product=IsrA
NC_011748.1	RefSeq	gene	1546505	1547068	.	+	.	ID=gene1536;Name=ydaL;Dbxref=GeneID:7146633;gbkey=Gene;gene=ydaL;locus_tag=EC55989_1505
NC_011748.1	RefSeq	CDS	1546505	1547068	.	+	0	ID=cds1437;Name=YP_002402582.1;Parent=gene1536;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402582.1,GeneID:7146633;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402582.1;transl_table=11
NC_011748.1	RefSeq	gene	1547089	1548321	.	-	.	ID=gene1537;Name=ydaM;Dbxref=GeneID:7148373;gbkey=Gene;gene=ydaM;locus_tag=EC55989_1506
NC_011748.1	RefSeq	CDS	1547089	1548321	.	-	0	ID=cds1438;Name=YP_002402583.1;Parent=gene1537;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 16045609%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002402583.1,GeneID:7148373;gbkey=CDS;product=diguanylate cyclase%2C GG%5BD%2FE%5DEF domain signalling protein;protein_id=YP_002402583.1;transl_table=11
NC_011748.1	RefSeq	gene	1548576	1549559	.	+	.	ID=gene1538;Name=zntB;Dbxref=GeneID:7148374;gbkey=Gene;gene=zntB;locus_tag=EC55989_1507
NC_011748.1	RefSeq	CDS	1548576	1549559	.	+	0	ID=cds1439;Name=YP_002402584.1;Parent=gene1538;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002402584.1,GeneID:7148374;gbkey=CDS;product=zinc transporter;protein_id=YP_002402584.1;transl_table=11
NC_011748.1	RefSeq	gene	1549834	1550007	.	+	.	ID=gene1539;Name=EC55989_1508;Dbxref=GeneID:7148375;gbkey=Gene;locus_tag=EC55989_1508
NC_011748.1	RefSeq	CDS	1549834	1550007	.	+	0	ID=cds1440;Name=YP_002402585.1;Parent=gene1539;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402585.1,GeneID:7148375;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402585.1;transl_table=11
NC_011748.1	RefSeq	gene	1549889	1549963	.	+	.	ID=gene1540;Name=C0343;Dbxref=GeneID:7144602;gbkey=Gene;gene=C0343;locus_tag=EC55989_misc_RNA_31
NC_011748.1	RefSeq	transcript	1549889	1549963	.	+	.	ID=rna64;Parent=gene1540;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type n : RNA;Dbxref=GeneID:7144602;gbkey=misc_RNA;product=C0343
NC_011748.1	RefSeq	exon	1549889	1549963	.	+	.	ID=id117;Parent=rna64;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type n : RNA;Dbxref=GeneID:7144602;gbkey=misc_RNA;product=C0343
NC_011748.1	RefSeq	gene	1550037	1551410	.	+	.	ID=gene1541;Name=dbpA;Dbxref=GeneID:7145649;gbkey=Gene;gene=dbpA;locus_tag=EC55989_1509
NC_011748.1	RefSeq	CDS	1550037	1551410	.	+	0	ID=cds1441;Name=YP_002402586.1;Parent=gene1541;Note=exhibits an RNA-dependent ATPase activity%2C specifically stimulated by bacterial 23S rRNA;Dbxref=Genbank:YP_002402586.1,GeneID:7145649;gbkey=CDS;product=ATP-dependent RNA helicase DbpA;protein_id=YP_002402586.1;transl_table=11
NC_011748.1	RefSeq	gene	1551539	1552474	.	-	.	ID=gene1542;Name=ydaO;Dbxref=GeneID:7145854;gbkey=Gene;gene=ydaO;locus_tag=EC55989_1510
NC_011748.1	RefSeq	CDS	1551539	1552474	.	-	0	ID=cds1442;Name=YP_002402587.1;Parent=gene1542;Note=TtcA%3B YdaO%3B catalyzes the thiolation of cytosine 32 in specific tRNAs;Dbxref=Genbank:YP_002402587.1,GeneID:7145854;gbkey=CDS;product=C32 tRNA thiolase;protein_id=YP_002402587.1;transl_table=11
NC_011748.1	RefSeq	gene	1552650	1553084	.	-	.	ID=gene1543;Name=uspF;Dbxref=GeneID:7148376;gbkey=Gene;gene=uspF;locus_tag=EC55989_1511
NC_011748.1	RefSeq	CDS	1552650	1553084	.	-	0	ID=cds1443;Name=YP_002402588.1;Parent=gene1543;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 12732303%2C 12381839%2C 11849540%2C 9298646%3B Product type f : factor;Dbxref=Genbank:YP_002402588.1,GeneID:7148376;gbkey=CDS;product=stress-induced protein%2C ATP-binding protein;protein_id=YP_002402588.1;transl_table=11
NC_011748.1	RefSeq	gene	1553225	1554358	.	-	.	ID=gene1544;Name=ompN;Dbxref=GeneID:7147930;gbkey=Gene;gene=ompN;locus_tag=EC55989_1512
NC_011748.1	RefSeq	CDS	1553225	1554358	.	-	0	ID=cds1444;Name=YP_002402589.1;Parent=gene1544;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 9642192%3B Product type t : transporter;Dbxref=Genbank:YP_002402589.1,GeneID:7147930;gbkey=CDS;product=outer membrane pore protein N%2C non-specific;protein_id=YP_002402589.1;transl_table=11
NC_011748.1	RefSeq	gene	1554586	1554694	.	+	.	ID=gene1545;Name=micC;Dbxref=GeneID:7147069;gbkey=Gene;gene=micC;locus_tag=EC55989_misc_RNA_32
NC_011748.1	RefSeq	transcript	1554586	1554694	.	+	.	ID=rna65;Parent=gene1545;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 15466019%3B Product type n : RNA;Dbxref=GeneID:7147069;gbkey=misc_RNA;product=MicC
NC_011748.1	RefSeq	exon	1554586	1554694	.	+	.	ID=id118;Parent=rna65;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 15466019%3B Product type n : RNA;Dbxref=GeneID:7147069;gbkey=misc_RNA;product=MicC
NC_011748.1	RefSeq	gene	1554725	1558249	.	-	.	ID=gene1546;Name=ydbK;Dbxref=GeneID:7146855;gbkey=Gene;gene=ydbK;locus_tag=EC55989_1513
NC_011748.1	RefSeq	CDS	1554725	1558249	.	-	0	ID=cds1445;Name=YP_002402590.1;Parent=gene1546;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 9025293%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002402590.1,GeneID:7146855;gbkey=CDS;product=2-oxoacid-flavodoxin fused oxidoreductase:conserved protein%3B 4Fe-4S cluster binding protein;protein_id=YP_002402590.1;transl_table=11
NC_011748.1	RefSeq	gene	1558523	1558789	.	+	.	ID=gene1547;Name=ydbJ;Dbxref=GeneID:7148381;gbkey=Gene;gene=ydbJ;locus_tag=EC55989_1514
NC_011748.1	RefSeq	CDS	1558523	1558789	.	+	0	ID=cds1446;Name=YP_002402591.1;Parent=gene1547;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402591.1,GeneID:7148381;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402591.1;transl_table=11
NC_011748.1	RefSeq	gene	1558786	1559208	.	-	.	ID=gene1548;Name=hslJ;Dbxref=GeneID:7148380;gbkey=Gene;gene=hslJ;locus_tag=EC55989_1515
NC_011748.1	RefSeq	CDS	1558786	1559208	.	-	0	ID=cds1447;Name=YP_002402592.1;Parent=gene1548;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 12892888%2C 8349564%2C 9025293%3B Product type f : factor;Dbxref=Genbank:YP_002402592.1,GeneID:7148380;gbkey=CDS;product=heat-inducible protein;protein_id=YP_002402592.1;transl_table=11
NC_011748.1	RefSeq	gene	1559319	1560308	.	-	.	ID=gene1549;Name=ldhA;Dbxref=GeneID:7146467;gbkey=Gene;gene=ldhA;locus_tag=EC55989_1516
NC_011748.1	RefSeq	CDS	1559319	1560308	.	-	0	ID=cds1448;Name=YP_002402593.1;Parent=gene1549;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 4297266%2C 89123040%2C 90198524%2C 8349564%2C 9025293%3B Product type e : enzyme;Dbxref=Genbank:YP_002402593.1,GeneID:7146467;gbkey=CDS;product=fermentative D-lactate dehydrogenase%2C NAD-dependent;protein_id=YP_002402593.1;transl_table=11
NC_011748.1	RefSeq	gene	1560516	1563155	.	+	.	ID=gene1550;Name=ydbH;Dbxref=GeneID:7146682;gbkey=Gene;gene=ydbH;locus_tag=EC55989_1517
NC_011748.1	RefSeq	CDS	1560516	1563155	.	+	0	ID=cds1449;Name=YP_002402594.1;Parent=gene1550;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402594.1,GeneID:7146682;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402594.1;transl_table=11
NC_011748.1	RefSeq	gene	1563152	1563337	.	+	.	ID=gene1551;Name=ynbE;Dbxref=GeneID:7148379;gbkey=Gene;gene=ynbE;locus_tag=EC55989_1518
NC_011748.1	RefSeq	CDS	1563152	1563337	.	+	0	ID=cds1450;Name=YP_002402595.1;Parent=gene1551;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type lp : lipoprotein;Dbxref=Genbank:YP_002402595.1,GeneID:7148379;gbkey=CDS;product=lipoprotein;protein_id=YP_002402595.1;transl_table=11
NC_011748.1	RefSeq	gene	1563345	1563671	.	+	.	ID=gene1552;Name=ydbL;Dbxref=GeneID:7149290;gbkey=Gene;gene=ydbL;locus_tag=EC55989_1519
NC_011748.1	RefSeq	CDS	1563345	1563671	.	+	0	ID=cds1451;Name=YP_002402596.1;Parent=gene1552;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402596.1,GeneID:7149290;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402596.1;transl_table=11
NC_011748.1	RefSeq	gene	1563843	1564748	.	-	.	ID=gene1553;Name=feaR;Dbxref=GeneID:7148382;gbkey=Gene;gene=feaR;locus_tag=EC55989_1520
NC_011748.1	RefSeq	CDS	1563843	1564748	.	-	0	ID=cds1452;Name=YP_002402597.1;Parent=gene1553;Note=activator of genes involved in phenylacetic acid catabolism;Dbxref=Genbank:YP_002402597.1,GeneID:7148382;gbkey=CDS;product=DNA-binding transcriptional activator FeaR;protein_id=YP_002402597.1;transl_table=11
NC_011748.1	RefSeq	gene	1564984	1566483	.	+	.	ID=gene1554;Name=feaB;Dbxref=GeneID:7146078;gbkey=Gene;gene=feaB;locus_tag=EC55989_1521
NC_011748.1	RefSeq	CDS	1564984	1566483	.	+	0	ID=cds1453;Name=YP_002402598.1;Parent=gene1554;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 96213037%2C 97263463%2C 9043126%3B Product type e : enzyme;Dbxref=Genbank:YP_002402598.1,GeneID:7146078;gbkey=CDS;product=phenylacetaldehyde dehydrogenase;protein_id=YP_002402598.1;transl_table=11
NC_011748.1	RefSeq	gene	1566541	1568814	.	-	.	ID=gene1555;Name=tynA;Dbxref=GeneID:7146077;gbkey=Gene;gene=tynA;locus_tag=EC55989_1522
NC_011748.1	RefSeq	CDS	1566541	1568814	.	-	0	ID=cds1454;Name=YP_002402599.1;Parent=gene1555;Note=catalyzes the formation of phenylacetaldehyde from 2-phenylethylamine;Dbxref=Genbank:YP_002402599.1,GeneID:7146077;gbkey=CDS;product=tyramine oxidase;protein_id=YP_002402599.1;transl_table=11
NC_011748.1	RefSeq	gene	1569062	1571107	.	-	.	ID=gene1556;Name=maoC;Dbxref=GeneID:7147880;gbkey=Gene;gene=maoC;locus_tag=EC55989_1523
NC_011748.1	RefSeq	CDS	1569062	1571107	.	-	0	ID=cds1455;Name=YP_002402600.1;Parent=gene1556;Note=catalyzes the ring cleavage reaction in phenylacetate degradation and the formation of 3-hydroxyacyl-CoA from crotonyl-CoA;Dbxref=Genbank:YP_002402600.1,GeneID:7147880;gbkey=CDS;product=bifunctional aldehyde dehydrogenase%2Fenoyl-CoA hydratase;protein_id=YP_002402600.1;transl_table=11
NC_011748.1	RefSeq	gene	1571392	1572321	.	+	.	ID=gene1557;Name=paaA;Dbxref=GeneID:7146785;gbkey=Gene;gene=paaA;locus_tag=EC55989_1524
NC_011748.1	RefSeq	CDS	1571392	1572321	.	+	0	ID=cds1456;Name=YP_002402601.1;Parent=gene1557;Note=with PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA;Dbxref=Genbank:YP_002402601.1,GeneID:7146785;gbkey=CDS;product=phenylacetate-CoA oxygenase subunit PaaA;protein_id=YP_002402601.1;transl_table=11
NC_011748.1	RefSeq	gene	1572333	1572620	.	+	.	ID=gene1558;Name=paaB;Dbxref=GeneID:7147093;gbkey=Gene;gene=paaB;locus_tag=EC55989_1525
NC_011748.1	RefSeq	CDS	1572333	1572620	.	+	0	ID=cds1457;Name=YP_002402602.1;Parent=gene1558;Note=with PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA%3B involved in phenylacetate degradation;Dbxref=Genbank:YP_002402602.1,GeneID:7147093;gbkey=CDS;product=phenylacetate-CoA oxygenase subunit PaaB;protein_id=YP_002402602.1;transl_table=11
NC_011748.1	RefSeq	gene	1572629	1573375	.	+	.	ID=gene1559;Name=paaC;Dbxref=GeneID:7147094;gbkey=Gene;gene=paaC;locus_tag=EC55989_1526
NC_011748.1	RefSeq	CDS	1572629	1573375	.	+	0	ID=cds1458;Name=YP_002402603.1;Parent=gene1559;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 12846838%2C 9748275%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002402603.1,GeneID:7147094;gbkey=CDS;product=multicomponent oxygenase%2Freductase subunit for phenylacetic acid degradation;protein_id=YP_002402603.1;transl_table=11
NC_011748.1	RefSeq	gene	1573390	1573887	.	+	.	ID=gene1560;Name=paaD;Dbxref=GeneID:7147095;gbkey=Gene;gene=paaD;locus_tag=EC55989_1527
NC_011748.1	RefSeq	CDS	1573390	1573887	.	+	0	ID=cds1459;Name=YP_002402604.1;Parent=gene1560;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 12846838%2C 9748275%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002402604.1,GeneID:7147095;gbkey=CDS;product=multicomponent oxygenase%2Freductase subunit for phenylacetic acid degradation;protein_id=YP_002402604.1;transl_table=11
NC_011748.1	RefSeq	gene	1573895	1574965	.	+	.	ID=gene1561;Name=paaJ;Dbxref=GeneID:7147096;gbkey=Gene;gene=paaJ;locus_tag=EC55989_1528
NC_011748.1	RefSeq	CDS	1573895	1574965	.	+	0	ID=cds1460;Name=YP_002402605.1;Parent=gene1561;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 17259607%2C 11260461%2C 12846838%2C 9748275%3B Product type e : enzyme;Dbxref=Genbank:YP_002402605.1,GeneID:7147096;gbkey=CDS;product=subunit of the phenylacetly-CoA oxygenase%2Freductase;protein_id=YP_002402605.1;transl_table=11
NC_011748.1	RefSeq	gene	1574962	1575729	.	+	.	ID=gene1562;Name=paaF;Dbxref=GeneID:7147102;gbkey=Gene;gene=paaF;locus_tag=EC55989_1529
NC_011748.1	RefSeq	CDS	1574962	1575729	.	+	0	ID=cds1461;Name=YP_002402606.1;Parent=gene1562;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 12846838%2C 9748275%2C 10766858%3B Product type e : enzyme;Dbxref=Genbank:YP_002402606.1,GeneID:7147102;gbkey=CDS;product=enoyl-CoA hydratase-isomerase;protein_id=YP_002402606.1;transl_table=11
NC_011748.1	RefSeq	gene	1575729	1576517	.	+	.	ID=gene1563;Name=paaG;Dbxref=GeneID:7147098;gbkey=Gene;gene=paaG;locus_tag=EC55989_1530
NC_011748.1	RefSeq	CDS	1575729	1576517	.	+	0	ID=cds1462;Name=YP_002402607.1;Parent=gene1563;Note=Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA;Dbxref=Genbank:YP_002402607.1,GeneID:7147098;gbkey=CDS;product=enoyl-CoA hydratase;protein_id=YP_002402607.1;transl_table=11
NC_011748.1	RefSeq	gene	1576519	1577946	.	+	.	ID=gene1564;Name=paaH;Dbxref=GeneID:7147099;gbkey=Gene;gene=paaH;locus_tag=EC55989_1531
NC_011748.1	RefSeq	CDS	1576519	1577946	.	+	0	ID=cds1463;Name=YP_002402608.1;Parent=gene1564;Note=converts 3-hydroxyadipyl-CoA to beta-ketoadipyl-CoA in phenylacetate degradation;Dbxref=Genbank:YP_002402608.1,GeneID:7147099;gbkey=CDS;product=3-hydroxyacyl-CoA dehydrogenase;protein_id=YP_002402608.1;transl_table=11
NC_011748.1	RefSeq	gene	1577936	1578358	.	+	.	ID=gene1565;Name=paaI;Dbxref=GeneID:7147100;gbkey=Gene;gene=paaI;locus_tag=EC55989_1532
NC_011748.1	RefSeq	CDS	1577936	1578358	.	+	0	ID=cds1464;Name=YP_002402609.1;Parent=gene1565;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 16464851%2C 12846838%2C 9748275%3B Product type e : enzyme;Dbxref=Genbank:YP_002402609.1,GeneID:7147100;gbkey=CDS;product=phenylacetate pathway hotdog-fold thioesterase;protein_id=YP_002402609.1;transl_table=11
NC_011748.1	RefSeq	gene	1578358	1579563	.	+	.	ID=gene1566;Name=paaE;Dbxref=GeneID:7147101;gbkey=Gene;gene=paaE;locus_tag=EC55989_1533
NC_011748.1	RefSeq	CDS	1578358	1579563	.	+	0	ID=cds1465;Name=YP_002402610.1;Parent=gene1566;Note=catalyzes the thiolytic cleavage of beta-ketoadipyl-CoA to succinate and acetyl-CoA;Dbxref=Genbank:YP_002402610.1,GeneID:7147101;gbkey=CDS;product=beta-ketoadipyl CoA thiolase;protein_id=YP_002402610.1;transl_table=11
NC_011748.1	RefSeq	gene	1579590	1580903	.	+	.	ID=gene1567;Name=paaK;Dbxref=GeneID:7147097;gbkey=Gene;gene=paaK;locus_tag=EC55989_1534
NC_011748.1	RefSeq	CDS	1579590	1580903	.	+	0	ID=cds1466;Name=YP_002402611.1;Parent=gene1567;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 12846838%2C 9748275%2C 10766858%3B Product type e : enzyme;Dbxref=Genbank:YP_002402611.1,GeneID:7147097;gbkey=CDS;product=phenylacetyl-CoA ligase;protein_id=YP_002402611.1;transl_table=11
NC_011748.1	RefSeq	gene	1581004	1581954	.	+	.	ID=gene1568;Name=paaX;Dbxref=GeneID:7147103;gbkey=Gene;gene=paaX;locus_tag=EC55989_1535
NC_011748.1	RefSeq	CDS	1581004	1581954	.	+	0	ID=cds1467;Name=YP_002402612.1;Parent=gene1568;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 12846838%2C 20229831%2C 9748275%3B Product type r : regulator;Dbxref=Genbank:YP_002402612.1,GeneID:7147103;gbkey=CDS;product=DNA-binding transcriptional repressor of phenylacetic acid degradation%2C aryl-CoA responsive;protein_id=YP_002402612.1;transl_table=11
NC_011748.1	RefSeq	gene	1581936	1582526	.	+	.	ID=gene1569;Name=paaY;Dbxref=GeneID:7147104;gbkey=Gene;gene=paaY;locus_tag=EC55989_1536
NC_011748.1	RefSeq	CDS	1581936	1582526	.	+	0	ID=cds1468;Name=YP_002402613.1;Parent=gene1569;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 12846838%2C 9748275%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002402613.1,GeneID:7147104;gbkey=CDS;product=hexapeptide repeat acetyltransferase;protein_id=YP_002402613.1;transl_table=11
NC_011748.1	RefSeq	gene	1582756	1583616	.	+	.	ID=gene1570;Name=ydbC;Dbxref=GeneID:7147105;gbkey=Gene;gene=ydbC;locus_tag=EC55989_1537
NC_011748.1	RefSeq	CDS	1582756	1583616	.	+	0	ID=cds1469;Name=YP_002402614.1;Parent=gene1570;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002402614.1,GeneID:7147105;gbkey=CDS;product=oxidoreductase;protein_id=YP_002402614.1;transl_table=11
NC_011748.1	RefSeq	gene	1583680	1585986	.	+	.	ID=gene1571;Name=ydbD;Dbxref=GeneID:7148377;gbkey=Gene;gene=ydbD;locus_tag=EC55989_1538
NC_011748.1	RefSeq	CDS	1583680	1585986	.	+	0	ID=cds1470;Name=YP_002402615.1;Parent=gene1571;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402615.1,GeneID:7148377;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402615.1;transl_table=11
NC_011748.1	RefSeq	gene	1586157	1586762	.	+	.	ID=gene1572;Name=ynbA;Dbxref=GeneID:7148378;gbkey=Gene;gene=ynbA;locus_tag=EC55989_1539
NC_011748.1	RefSeq	CDS	1586157	1586762	.	+	0	ID=cds1471;Name=YP_002402616.1;Parent=gene1572;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002402616.1,GeneID:7148378;gbkey=CDS;product=inner membrane protein;protein_id=YP_002402616.1;transl_table=11
NC_011748.1	RefSeq	gene	1586762	1587658	.	+	.	ID=gene1573;Name=ynbB;Dbxref=GeneID:7149286;gbkey=Gene;gene=ynbB;locus_tag=EC55989_1540
NC_011748.1	RefSeq	CDS	1586762	1587658	.	+	0	ID=cds1472;Name=YP_002402617.1;Parent=gene1573;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002402617.1,GeneID:7149286;gbkey=CDS;product=membrane associated CTP-phosphosubstrate transferase;protein_id=YP_002402617.1;transl_table=11
NC_011748.1	RefSeq	gene	1587674	1589431	.	+	.	ID=gene1574;Name=ynbC;Dbxref=GeneID:7149287;gbkey=Gene;gene=ynbC;locus_tag=EC55989_1541
NC_011748.1	RefSeq	CDS	1587674	1589431	.	+	0	ID=cds1473;Name=YP_002402618.1;Parent=gene1574;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002402618.1,GeneID:7149287;gbkey=CDS;product=hydrolase;protein_id=YP_002402618.1;transl_table=11
NC_011748.1	RefSeq	gene	1589445	1590737	.	+	.	ID=gene1575;Name=ynbD;Dbxref=GeneID:7149288;gbkey=Gene;gene=ynbD;locus_tag=EC55989_1542
NC_011748.1	RefSeq	CDS	1589445	1590737	.	+	0	ID=cds1474;Name=YP_002402619.1;Parent=gene1575;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002402619.1,GeneID:7149288;gbkey=CDS;product=membrane associated phosphatase;protein_id=YP_002402619.1;transl_table=11
NC_011748.1	RefSeq	gene	1590788	1591393	.	-	.	ID=gene1576;Name=azoR;Dbxref=GeneID:7149289;gbkey=Gene;gene=azoR;locus_tag=EC55989_1543
NC_011748.1	RefSeq	CDS	1590788	1591393	.	-	0	ID=cds1475;Name=YP_002402620.1;Parent=gene1576;Note=FMN-dependent%3B requires NADH%3B catalyzes the cleavage of azo bond in aromatic azo compounds;Dbxref=Genbank:YP_002402620.1,GeneID:7149289;gbkey=CDS;product=azoreductase;protein_id=YP_002402620.1;transl_table=11
NC_011748.1	RefSeq	gene	1591651	1595496	.	+	.	ID=gene1577;Name=hrpA;Dbxref=GeneID:7145590;gbkey=Gene;gene=hrpA;locus_tag=EC55989_1544
NC_011748.1	RefSeq	CDS	1591651	1595496	.	+	0	ID=cds1476;Name=YP_002402621.1;Parent=gene1577;Note=involved in the post-transcriptional processing of the daa operon mRNA%2C which encodes proteins involved in fimbrial biogenesis of an enteropathogenic E. coli strain;Dbxref=Genbank:YP_002402621.1,GeneID:7145590;gbkey=CDS;product=ATP-dependent RNA helicase HrpA;protein_id=YP_002402621.1;transl_table=11
NC_011748.1	RefSeq	gene	1595768	1596568	.	+	.	ID=gene1578;Name=ydcF;Dbxref=GeneID:7146459;gbkey=Gene;gene=ydcF;locus_tag=EC55989_1545
NC_011748.1	RefSeq	CDS	1595768	1596568	.	+	0	ID=cds1477;Name=YP_002402622.1;Parent=gene1578;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402622.1,GeneID:7146459;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402622.1;transl_table=11
NC_011748.1	RefSeq	gene	1596765	1598204	.	+	.	ID=gene1579;Name=aldA;Dbxref=GeneID:7148385;gbkey=Gene;gene=aldA;locus_tag=EC55989_1546
NC_011748.1	RefSeq	CDS	1596765	1598204	.	+	0	ID=cds1478;Name=YP_002402623.1;Parent=gene1579;Note=NAD-linked;Dbxref=Genbank:YP_002402623.1,GeneID:7148385;gbkey=CDS;product=aldehyde dehydrogenase;protein_id=YP_002402623.1;transl_table=11
NC_011748.1	RefSeq	gene	1598246	1599247	.	-	.	ID=gene1580;Name=gapC;Dbxref=GeneID:7145479;gbkey=Gene;gene=gapC;locus_tag=EC55989_1547
NC_011748.1	RefSeq	CDS	1598246	1599247	.	-	0	ID=cds1479;Name=YP_002402624.1;Parent=gene1580;Note=Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism%3B PubMedId : 9622357%2C 9019141%2C 1917845%2C 3780374%3B Product type e : enzyme;Dbxref=Genbank:YP_002402624.1,GeneID:7145479;gbkey=CDS;product=glyceraldehyde-3-phosphate dehydrogenase;protein_id=YP_002402624.1;transl_table=11
NC_011748.1	RefSeq	gene	1599436	1599966	.	+	.	ID=gene1581;Name=cybB;Dbxref=GeneID:7146257;gbkey=Gene;gene=cybB;locus_tag=EC55989_1548
NC_011748.1	RefSeq	CDS	1599436	1599966	.	+	0	ID=cds1480;Name=YP_002402625.1;Parent=gene1581;Note=B-type di-heme cytochrome with a major alpha-absorption peak at 561 nm and a minor peak at 555 nm;Dbxref=Genbank:YP_002402625.1,GeneID:7146257;gbkey=CDS;product=cytochrome b561;protein_id=YP_002402625.1;transl_table=11
NC_011748.1	RefSeq	gene	1599977	1600040	.	-	.	ID=gene1582;Name=rydC;Dbxref=GeneID:7145804;gbkey=Gene;gene=rydC;locus_tag=EC55989_misc_RNA_33
NC_011748.1	RefSeq	transcript	1599977	1600040	.	-	.	ID=rna66;Parent=gene1582;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 15618228%3B Product type n : RNA;Dbxref=GeneID:7145804;gbkey=misc_RNA;product=RydC
NC_011748.1	RefSeq	exon	1599977	1600040	.	-	.	ID=id119;Parent=rna66;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 15618228%3B Product type n : RNA;Dbxref=GeneID:7145804;gbkey=misc_RNA;product=RydC
NC_011748.1	RefSeq	gene	1600211	1600384	.	+	.	ID=gene1583;Name=ydcA;Dbxref=GeneID:7147577;gbkey=Gene;gene=ydcA;locus_tag=EC55989_1549
NC_011748.1	RefSeq	CDS	1600211	1600384	.	+	0	ID=cds1481;Name=YP_002402626.1;Parent=gene1583;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402626.1,GeneID:7147577;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402626.1;transl_table=11
NC_011748.1	RefSeq	gene	1600496	1600663	.	-	.	ID=gene1584;Name=mokB;Dbxref=GeneID:7148383;gbkey=Gene;gene=mokB;locus_tag=EC55989_1550
NC_011748.1	RefSeq	CDS	1600496	1600663	.	-	0	ID=cds1482;Name=YP_002402627.1;Parent=gene1584;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 9689094%3B Product type r : regulator;Dbxref=Genbank:YP_002402627.1,GeneID:7148383;gbkey=CDS;product=regulatory peptide;protein_id=YP_002402627.1;transl_table=11
NC_011748.1	RefSeq	gene	1600653	1600705	.	+	.	ID=gene1585;Name=sokB;Dbxref=GeneID:7146887;gbkey=Gene;gene=sokB;locus_tag=EC55989_misc_RNA_34
NC_011748.1	RefSeq	transcript	1600653	1600705	.	+	.	ID=rna67;Parent=gene1585;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 10361310%3B Product type n : RNA;Dbxref=GeneID:7146887;gbkey=misc_RNA;product=SokB
NC_011748.1	RefSeq	exon	1600653	1600705	.	+	.	ID=id120;Parent=rna67;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 10361310%3B Product type n : RNA;Dbxref=GeneID:7146887;gbkey=misc_RNA;product=SokB
NC_011748.1	RefSeq	gene	1601004	1602644	.	+	.	ID=gene1586;Name=trg;Dbxref=GeneID:7147676;gbkey=Gene;gene=trg;locus_tag=EC55989_1551
NC_011748.1	RefSeq	CDS	1601004	1602644	.	+	0	ID=cds1483;Name=YP_002402628.1;Parent=gene1586;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 90008892%2C 92390356%2C 93259131%2C 6374654%3B Product type r : regulator;Dbxref=Genbank:YP_002402628.1,GeneID:7147676;gbkey=CDS;product=methyl-accepting chemotaxis protein III%2C ribose and galactose sensor receptor;protein_id=YP_002402628.1;transl_table=11
NC_011748.1	RefSeq	gene	1602682	1603605	.	-	.	ID=gene1587;Name=ydcI;Dbxref=GeneID:7147840;gbkey=Gene;gene=ydcI;locus_tag=EC55989_1552
NC_011748.1	RefSeq	CDS	1602682	1603605	.	-	0	ID=cds1484;Name=YP_002402629.1;Parent=gene1587;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pr :  regulator;Dbxref=Genbank:YP_002402629.1,GeneID:7147840;gbkey=CDS;product=DNA-binding transcriptional regulator;protein_id=YP_002402629.1;transl_table=11
NC_011748.1	RefSeq	gene	1603822	1605165	.	+	.	ID=gene1588;Name=ydcJ;Dbxref=GeneID:7148387;gbkey=Gene;gene=ydcJ;locus_tag=EC55989_1553
NC_011748.1	RefSeq	CDS	1603822	1605165	.	+	0	ID=cds1485;Name=YP_002402630.1;Parent=gene1588;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402630.1,GeneID:7148387;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402630.1;transl_table=11
NC_011748.1	RefSeq	gene	1605420	1607045	.	+	.	ID=gene1589;Name=mdoD;Dbxref=GeneID:7148388;gbkey=Gene;gene=mdoD;locus_tag=EC55989_1555
NC_011748.1	RefSeq	CDS	1605420	1607045	.	+	0	ID=cds1486;Name=YP_002402631.1;Parent=gene1589;Note=involved in the control of the structural glucose backbone of osmoregulated periplasmic glucans;Dbxref=Genbank:YP_002402631.1,GeneID:7148388;gbkey=CDS;product=glucan biosynthesis protein D;protein_id=YP_002402631.1;transl_table=11
NC_011748.1	RefSeq	gene	1606966	1607169	.	-	.	ID=gene1590;Name=EC55989_1556;Dbxref=GeneID:7146799;gbkey=Gene;locus_tag=EC55989_1556
NC_011748.1	RefSeq	CDS	1606966	1607169	.	-	0	ID=cds1487;Name=YP_002402632.1;Parent=gene1590;Note=Evidence 6 : Doubtful CDS;Dbxref=Genbank:YP_002402632.1,GeneID:7146799;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402632.1;transl_table=11
NC_011748.1	RefSeq	gene	1607185	1607409	.	+	.	ID=gene1591;Name=ydcH;Dbxref=GeneID:7144603;gbkey=Gene;gene=ydcH;locus_tag=EC55989_1557
NC_011748.1	RefSeq	CDS	1607185	1607409	.	+	0	ID=cds1488;Name=YP_002402633.1;Parent=gene1591;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402633.1,GeneID:7144603;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402633.1;transl_table=11
NC_011748.1	RefSeq	gene	1607457	1608008	.	+	.	ID=gene1592;Name=rimL;Dbxref=GeneID:7148386;gbkey=Gene;gene=rimL;locus_tag=EC55989_1558
NC_011748.1	RefSeq	CDS	1607457	1608008	.	+	0	ID=cds1489;Name=YP_002402634.1;Parent=gene1592;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 89364711%3B Product type e : enzyme;Dbxref=Genbank:YP_002402634.1,GeneID:7148386;gbkey=CDS;product=ribosomal-protein-L7%2FL12-serine acetyltransferase;protein_id=YP_002402634.1;transl_table=11
NC_011748.1	RefSeq	gene	1608003	1608983	.	-	.	ID=gene1593;Name=ydcK;Dbxref=GeneID:7147421;gbkey=Gene;gene=ydcK;locus_tag=EC55989_1559
NC_011748.1	RefSeq	CDS	1608003	1608983	.	-	0	ID=cds1490;Name=YP_002402635.1;Parent=gene1593;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002402635.1,GeneID:7147421;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402635.1;transl_table=11
NC_011748.1	RefSeq	gene	1609107	1610099	.	+	.	ID=gene1594;Name=tehA;Dbxref=GeneID:7148389;gbkey=Gene;gene=tehA;locus_tag=EC55989_1560
NC_011748.1	RefSeq	CDS	1609107	1610099	.	+	0	ID=cds1491;Name=YP_002402636.1;Parent=gene1594;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 94222856%2C 2060788%3B Product type t : transporter;Dbxref=Genbank:YP_002402636.1,GeneID:7148389;gbkey=CDS;product=potassium-tellurite ethidium and proflavin transporter;protein_id=YP_002402636.1;transl_table=11
NC_011748.1	RefSeq	gene	1610096	1610689	.	+	.	ID=gene1595;Name=tehB;Dbxref=GeneID:7147773;gbkey=Gene;gene=tehB;locus_tag=EC55989_1561
NC_011748.1	RefSeq	CDS	1610096	1610689	.	+	0	ID=cds1492;Name=YP_002402637.1;Parent=gene1595;Note=with TehA confers resistance to tellurite;Dbxref=Genbank:YP_002402637.1,GeneID:7147773;gbkey=CDS;product=tellurite resistance protein TehB;protein_id=YP_002402637.1;transl_table=11
NC_011748.1	RefSeq	gene	1610992	1611660	.	+	.	ID=gene1596;Name=ydcL;Dbxref=GeneID:7147774;gbkey=Gene;gene=ydcL;locus_tag=EC55989_1562
NC_011748.1	RefSeq	CDS	1610992	1611660	.	+	0	ID=cds1493;Name=YP_002402638.1;Parent=gene1596;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type lp : lipoprotein;Dbxref=Genbank:YP_002402638.1,GeneID:7147774;gbkey=CDS;product=lipoprotein;protein_id=YP_002402638.1;transl_table=11
NC_011748.1	RefSeq	gene	1611678	1611845	.	-	.	ID=gene1597;Name=EC55989_1563;Dbxref=GeneID:7148390;gbkey=Gene;locus_tag=EC55989_1563
NC_011748.1	RefSeq	CDS	1611678	1611845	.	-	0	ID=cds1494;Name=YP_002402639.1;Parent=gene1597;Note=Evidence 7 : Gene remnant%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002402639.1,GeneID:7148390;gbkey=CDS;product=transposase ORF A %28fragment%29%2C IS605 family;protein_id=YP_002402639.1;transl_table=11
NC_011748.1	RefSeq	gene	1611957	1612112	.	-	.	ID=gene1598;Name=EC55989_1564;Dbxref=GeneID:7144604;gbkey=Gene;locus_tag=EC55989_1564
NC_011748.1	RefSeq	CDS	1611957	1612112	.	-	0	ID=cds1495;Name=YP_002402640.1;Parent=gene1598;Note=Evidence 7 : Gene remnant%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002402640.1,GeneID:7144604;gbkey=CDS;product=transposase ORF A %28fragment%29%2C IS605 family;protein_id=YP_002402640.1;transl_table=11
NC_011748.1	RefSeq	gene	1612187	1613395	.	+	.	ID=gene1599;Name=ydcM;Dbxref=GeneID:7144605;gbkey=Gene;gene=ydcM;locus_tag=EC55989_1565
NC_011748.1	RefSeq	CDS	1612187	1613395	.	+	0	ID=cds1496;Name=YP_002402641.1;Parent=gene1599;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002402641.1,GeneID:7144605;gbkey=CDS;product=transposase;protein_id=YP_002402641.1;transl_table=11
NC_011748.1	RefSeq	gene	1613435	1614610	.	-	.	ID=gene1600;Name=ydcO;Dbxref=GeneID:7148391;gbkey=Gene;gene=ydcO;locus_tag=EC55989_1566
NC_011748.1	RefSeq	CDS	1613435	1614610	.	-	0	ID=cds1497;Name=YP_002402642.1;Parent=gene1600;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 1885518%3B Product type pt :  transporter;Dbxref=Genbank:YP_002402642.1,GeneID:7148391;gbkey=CDS;product=benzoate transporter;protein_id=YP_002402642.1;transl_table=11
NC_011748.1	RefSeq	gene	1614702	1615238	.	+	.	ID=gene1601;Name=ydcN;Dbxref=GeneID:7148395;gbkey=Gene;gene=ydcN;locus_tag=EC55989_1567
NC_011748.1	RefSeq	CDS	1614702	1615238	.	+	0	ID=cds1498;Name=YP_002402643.1;Parent=gene1601;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pr :  regulator;Dbxref=Genbank:YP_002402643.1,GeneID:7148395;gbkey=CDS;product=DNA-binding transcriptional regulator;protein_id=YP_002402643.1;transl_table=11
NC_011748.1	RefSeq	gene	1615311	1617272	.	+	.	ID=gene1602;Name=ydcP;Dbxref=GeneID:7148394;gbkey=Gene;gene=ydcP;locus_tag=EC55989_1568
NC_011748.1	RefSeq	CDS	1615311	1617272	.	+	0	ID=cds1499;Name=YP_002402644.1;Parent=gene1602;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002402644.1,GeneID:7148394;gbkey=CDS;product=peptidase;protein_id=YP_002402644.1;transl_table=11
NC_011748.1	RefSeq	gene	1617364	1617594	.	-	.	ID=gene1603;Name=yncJ;Dbxref=GeneID:7148396;gbkey=Gene;gene=yncJ;locus_tag=EC55989_1569
NC_011748.1	RefSeq	CDS	1617364	1617594	.	-	0	ID=cds1500;Name=YP_002402645.1;Parent=gene1603;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402645.1,GeneID:7148396;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402645.1;transl_table=11
NC_011748.1	RefSeq	gene	1617995	1618432	.	+	.	ID=gene1604;Name=ydcQ;Dbxref=GeneID:7149298;gbkey=Gene;gene=ydcQ;locus_tag=EC55989_1570
NC_011748.1	RefSeq	CDS	1617995	1618432	.	+	0	ID=cds1501;Name=YP_002402646.1;Parent=gene1604;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pr :  regulator;Dbxref=Genbank:YP_002402646.1,GeneID:7149298;gbkey=CDS;product=DNA-binding transcriptional regulator;protein_id=YP_002402646.1;transl_table=11
NC_011748.1	RefSeq	gene	1618511	1619917	.	+	.	ID=gene1605;Name=ydcR;Dbxref=GeneID:7148397;gbkey=Gene;gene=ydcR;locus_tag=EC55989_1571
NC_011748.1	RefSeq	CDS	1618511	1619917	.	+	0	ID=cds1502;Name=YP_002402647.1;Parent=gene1605;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 15223311%3B Product type pr :  regulator;Dbxref=Genbank:YP_002402647.1,GeneID:7148397;gbkey=CDS;product=DNA-binding transcriptional regulator fused with a domain with PLP-binding motif;protein_id=YP_002402647.1;transl_table=11
NC_011748.1	RefSeq	gene	1620162	1621307	.	+	.	ID=gene1606;Name=ydcS;Dbxref=GeneID:7148398;gbkey=Gene;gene=ydcS;locus_tag=EC55989_1572
NC_011748.1	RefSeq	CDS	1620162	1621307	.	+	0	ID=cds1503;Name=YP_002402648.1;Parent=gene1606;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 11683869%3B Product type pt :  transporter;Dbxref=Genbank:YP_002402648.1,GeneID:7148398;gbkey=CDS;product=spermidine%2Fputrescine transporter subunit %3B periplasmic-binding component of ABC superfamily transporter;protein_id=YP_002402648.1;transl_table=11
NC_011748.1	RefSeq	gene	1621325	1622338	.	+	.	ID=gene1607;Name=ydcT;Dbxref=GeneID:7148399;gbkey=Gene;gene=ydcT;locus_tag=EC55989_1573
NC_011748.1	RefSeq	CDS	1621325	1622338	.	+	0	ID=cds1504;Name=YP_002402649.1;Parent=gene1607;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002402649.1,GeneID:7148399;gbkey=CDS;product=spermidine%2Fputrescine transporter subunit %3B ATP-binding component of ABC superfamily tranporter;protein_id=YP_002402649.1;transl_table=11
NC_011748.1	RefSeq	gene	1622339	1623280	.	+	.	ID=gene1608;Name=ydcU;Dbxref=GeneID:7148400;gbkey=Gene;gene=ydcU;locus_tag=EC55989_1574
NC_011748.1	RefSeq	CDS	1622339	1623280	.	+	0	ID=cds1505;Name=YP_002402650.1;Parent=gene1608;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002402650.1,GeneID:7148400;gbkey=CDS;product=spermidine%2Fputrescine transporter subunit %3B permease of ABC superfamily transporter;protein_id=YP_002402650.1;transl_table=11
NC_011748.1	RefSeq	gene	1623270	1624064	.	+	.	ID=gene1609;Name=ydcV;Dbxref=GeneID:7148401;gbkey=Gene;gene=ydcV;locus_tag=EC55989_1575
NC_011748.1	RefSeq	CDS	1623270	1624064	.	+	0	ID=cds1506;Name=YP_002402651.1;Parent=gene1609;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002402651.1,GeneID:7148401;gbkey=CDS;product=spermidine%2Fputrescine transporter subunit%3B permease component of ABC superfamily;protein_id=YP_002402651.1;transl_table=11
NC_011748.1	RefSeq	gene	1624086	1625510	.	+	.	ID=gene1610;Name=ydcW;Dbxref=GeneID:7148402;gbkey=Gene;gene=ydcW;locus_tag=EC55989_1576
NC_011748.1	RefSeq	CDS	1624086	1625510	.	+	0	ID=cds1507;Name=YP_002402652.1;Parent=gene1610;Note=catalyzes the formation of 4-aminobutanoate from 4-aminobutanal%3B involved in putrescine degradation;Dbxref=Genbank:YP_002402652.1,GeneID:7148402;gbkey=CDS;product=gamma-aminobutyraldehyde dehydrogenase;protein_id=YP_002402652.1;transl_table=11
NC_011748.1	RefSeq	gene	1625720	1626529	.	+	.	ID=gene1611;Name=EC55989_1577;Dbxref=GeneID:7148403;gbkey=Gene;locus_tag=EC55989_1577
NC_011748.1	RefSeq	CDS	1625720	1626529	.	+	0	ID=cds1508;Name=YP_002402653.1;Parent=gene1611;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 8257133%2C 11841212%2C 12771141%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002402653.1,GeneID:7148403;gbkey=CDS;product=acetyltransferase;protein_id=YP_002402653.1;transl_table=11
NC_011748.1	RefSeq	gene	1627146	1627394	.	+	.	ID=gene1612;Name=ydcX;Dbxref=GeneID:7144606;gbkey=Gene;gene=ydcX;locus_tag=EC55989_1578
NC_011748.1	RefSeq	CDS	1627146	1627394	.	+	0	ID=cds1509;Name=YP_002402654.1;Parent=gene1612;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002402654.1,GeneID:7144606;gbkey=CDS;product=inner membrane protein;protein_id=YP_002402654.1;transl_table=11
NC_011748.1	RefSeq	gene	1627480	1627713	.	+	.	ID=gene1613;Name=ydcY;Dbxref=GeneID:7148404;gbkey=Gene;gene=ydcY;locus_tag=EC55989_1579
NC_011748.1	RefSeq	CDS	1627480	1627713	.	+	0	ID=cds1510;Name=YP_002402655.1;Parent=gene1613;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402655.1,GeneID:7148404;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402655.1;transl_table=11
NC_011748.1	RefSeq	gene	1627714	1628163	.	-	.	ID=gene1614;Name=ydcZ;Dbxref=GeneID:7148405;gbkey=Gene;gene=ydcZ;locus_tag=EC55989_1580
NC_011748.1	RefSeq	CDS	1627714	1628163	.	-	0	ID=cds1511;Name=YP_002402656.1;Parent=gene1614;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002402656.1,GeneID:7148405;gbkey=CDS;product=inner membrane protein;protein_id=YP_002402656.1;transl_table=11
NC_011748.1	RefSeq	gene	1628160	1628912	.	-	.	ID=gene1615;Name=yncA;Dbxref=GeneID:7148406;gbkey=Gene;gene=yncA;locus_tag=EC55989_1581
NC_011748.1	RefSeq	CDS	1628160	1628912	.	-	0	ID=cds1512;Name=YP_002402657.1;Parent=gene1615;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002402657.1,GeneID:7148406;gbkey=CDS;product=acyl-CoA N-acyltransferase;protein_id=YP_002402657.1;transl_table=11
NC_011748.1	RefSeq	gene	1628859	1629896	.	+	.	ID=gene1616;Name=yncB;Dbxref=GeneID:7149291;gbkey=Gene;gene=yncB;locus_tag=EC55989_1582
NC_011748.1	RefSeq	CDS	1628859	1629896	.	+	0	ID=cds1513;Name=YP_002402658.1;Parent=gene1616;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002402658.1,GeneID:7149291;gbkey=CDS;product=conserved oxidoreductase%2C Zn-dependent and NAD%28P%29-binding;protein_id=YP_002402658.1;transl_table=11
NC_011748.1	RefSeq	gene	1630094	1630759	.	+	.	ID=gene1617;Name=yncC;Dbxref=GeneID:7149292;gbkey=Gene;gene=yncC;locus_tag=EC55989_1583
NC_011748.1	RefSeq	CDS	1630094	1630759	.	+	0	ID=cds1514;Name=YP_002402659.1;Parent=gene1617;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 11004173%3B Product type pr :  regulator;Dbxref=Genbank:YP_002402659.1,GeneID:7149292;gbkey=CDS;product=DNA-binding transcriptional regulator;protein_id=YP_002402659.1;transl_table=11
NC_011748.1	RefSeq	gene	1630795	1632897	.	-	.	ID=gene1618;Name=yncD;Dbxref=GeneID:7149293;gbkey=Gene;gene=yncD;locus_tag=EC55989_1584
NC_011748.1	RefSeq	CDS	1630795	1632897	.	-	0	ID=cds1515;Name=YP_002402660.1;Parent=gene1618;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type prc :  receptor;Dbxref=Genbank:YP_002402660.1,GeneID:7149293;gbkey=CDS;product=iron outer membrane receptor;protein_id=YP_002402660.1;transl_table=11
NC_011748.1	RefSeq	gene	1633139	1634200	.	+	.	ID=gene1619;Name=yncE;Dbxref=GeneID:7149294;gbkey=Gene;gene=yncE;locus_tag=EC55989_1585
NC_011748.1	RefSeq	CDS	1633139	1634200	.	+	0	ID=cds1516;Name=YP_002402661.1;Parent=gene1619;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402661.1,GeneID:7149294;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402661.1;transl_table=11
NC_011748.1	RefSeq	gene	1634313	1635812	.	-	.	ID=gene1620;Name=ansP;Dbxref=GeneID:7149295;gbkey=Gene;gene=ansP;locus_tag=EC55989_1586
NC_011748.1	RefSeq	CDS	1634313	1635812	.	-	0	ID=cds1517;Name=YP_002402662.1;Parent=gene1620;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 76005443%3B Product type t : transporter;Dbxref=Genbank:YP_002402662.1,GeneID:7149295;gbkey=CDS;product=L-asparagine transporter;protein_id=YP_002402662.1;transl_table=11
NC_011748.1	RefSeq	gene	1636079	1636696	.	+	.	ID=gene1621;Name=yncG;Dbxref=GeneID:7145504;gbkey=Gene;gene=yncG;locus_tag=EC55989_1587
NC_011748.1	RefSeq	CDS	1636079	1636696	.	+	0	ID=cds1518;Name=YP_002402663.1;Parent=gene1621;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002402663.1,GeneID:7145504;gbkey=CDS;product=glutathione S-transferase-like protein;protein_id=YP_002402663.1;transl_table=11
NC_011748.1	RefSeq	gene	1637768	1639912	.	+	.	ID=gene1622;Name=EC55989_1588;Dbxref=GeneID:7149296;gbkey=Gene;locus_tag=EC55989_1588
NC_011748.1	RefSeq	CDS	1637768	1639912	.	+	0	ID=cds1519;Name=YP_002402664.1;Parent=gene1622;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402664.1,GeneID:7149296;gbkey=CDS;product=VgrG protein%2C Encoded within repeats that are hotspots for chromosomal duplication formation%3B Function of protein is unknown;protein_id=YP_002402664.1;transl_table=11
NC_011748.1	RefSeq	gene	1639980	1644221	.	+	.	ID=gene1623;Name=rhsD;Dbxref=GeneID:7144607;gbkey=Gene;gene=rhsD;locus_tag=EC55989_1589
NC_011748.1	RefSeq	CDS	1639980	1644221	.	+	0	ID=cds1520;Name=YP_002402665.1;Parent=gene1623;Note=Evidence 2b : Function of strongly homologous gene%3B PubMedId : 98361897%2C 1766878%2C 2403547%2C 2644231%2C 7934896%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402665.1,GeneID:7144607;gbkey=CDS;product=rhsD element protein;protein_id=YP_002402665.1;transl_table=11
NC_011748.1	RefSeq	gene	1644221	1644682	.	+	.	ID=gene1624;Name=EC55989_1590;Dbxref=GeneID:7147404;gbkey=Gene;locus_tag=EC55989_1590
NC_011748.1	RefSeq	CDS	1644221	1644682	.	+	0	ID=cds1521;Name=YP_002402666.1;Parent=gene1624;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 9696756;Dbxref=Genbank:YP_002402666.1,GeneID:7147404;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402666.1;transl_table=11
NC_011748.1	RefSeq	gene	1645018	1645734	.	+	.	ID=gene1625;Name=yhhI;Dbxref=GeneID:7144608;gbkey=Gene;gene=yhhI;locus_tag=EC55989_1591;pseudo=true
NC_011748.1	RefSeq	region	1645018	1645734	.	+	.	ID=id121;Note=fragment of  transposase %28partial%29%3BEvidence 7 : Gene remnant%3B Product type ph : phenotype;Dbxref=GeneID:7144608;gbkey=misc_feature
NC_011748.1	RefSeq	gene	1645701	1645994	.	+	.	ID=gene1626;Name=EC55989_1592;Dbxref=GeneID:7148983;gbkey=Gene;locus_tag=EC55989_1592
NC_011748.1	RefSeq	CDS	1645701	1645994	.	+	0	ID=cds1522;Name=YP_002402667.1;Parent=gene1626;Note=4-OT%3B member of subfamily 5%3B forms a dimer%3B the function in the Escherichia coli cell is unknown;Dbxref=Genbank:YP_002402667.1,GeneID:7148983;gbkey=CDS;product=4-oxalocrotonate tautomerase;protein_id=YP_002402667.1;transl_table=11
NC_011748.1	RefSeq	gene	1645998	1646567	.	-	.	ID=gene1627;Name=yddH;Dbxref=GeneID:7144609;gbkey=Gene;gene=yddH;locus_tag=EC55989_1593
NC_011748.1	RefSeq	CDS	1645998	1646567	.	-	0	ID=cds1523;Name=YP_002402668.1;Parent=gene1627;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402668.1,GeneID:7144609;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402668.1;transl_table=11
NC_011748.1	RefSeq	gene	1646740	1647585	.	+	.	ID=gene1628;Name=nhoA;Dbxref=GeneID:7148411;gbkey=Gene;gene=nhoA;locus_tag=EC55989_1594
NC_011748.1	RefSeq	CDS	1646740	1647585	.	+	0	ID=cds1524;Name=YP_002402669.1;Parent=gene1628;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 20267568%3B Product type e : enzyme;Dbxref=Genbank:YP_002402669.1,GeneID:7148411;gbkey=CDS;product=N-hydroxyarylamine O-acetyltransferase;protein_id=YP_002402669.1;transl_table=11
NC_011748.1	RefSeq	gene	1647681	1648574	.	-	.	ID=gene1629;Name=yddE;Dbxref=GeneID:7146994;gbkey=Gene;gene=yddE;locus_tag=EC55989_1595
NC_011748.1	RefSeq	CDS	1647681	1648574	.	-	0	ID=cds1525;Name=YP_002402670.1;Parent=gene1629;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 14611652%2C 15103639%2C 2233673;Dbxref=Genbank:YP_002402670.1,GeneID:7146994;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402670.1;transl_table=11
NC_011748.1	RefSeq	gene	1648653	1649333	.	-	.	ID=gene1630;Name=narV;Dbxref=GeneID:7148409;gbkey=Gene;gene=narV;locus_tag=EC55989_1596
NC_011748.1	RefSeq	CDS	1648653	1649333	.	-	0	ID=cds1526;Name=YP_002402671.1;Parent=gene1630;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 91042410%3B Product type e : enzyme;Dbxref=Genbank:YP_002402671.1,GeneID:7148409;gbkey=CDS;product=nitrate reductase 2 %28NRZ%29%2C gamma subunit;protein_id=YP_002402671.1;transl_table=11
NC_011748.1	RefSeq	gene	1649330	1650025	.	-	.	ID=gene1631;Name=narW;Dbxref=GeneID:7146976;gbkey=Gene;gene=narW;locus_tag=EC55989_1597
NC_011748.1	RefSeq	CDS	1649330	1650025	.	-	0	ID=cds1527;Name=YP_002402672.1;Parent=gene1631;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 91042410%2C 92186712%3B Product type f : factor;Dbxref=Genbank:YP_002402672.1,GeneID:7146976;gbkey=CDS;product=nitrate reductase 2 %28NRZ%29%2C delta subunit %28assembly subunit%29;protein_id=YP_002402672.1;transl_table=11
NC_011748.1	RefSeq	gene	1650025	1651569	.	-	.	ID=gene1632;Name=narY;Dbxref=GeneID:7146977;gbkey=Gene;gene=narY;locus_tag=EC55989_1598
NC_011748.1	RefSeq	CDS	1650025	1651569	.	-	0	ID=cds1528;Name=YP_002402673.1;Parent=gene1632;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 91042410%3B Product type c : carrier;Dbxref=Genbank:YP_002402673.1,GeneID:7146977;gbkey=CDS;product=nitrate reductase 2 %28NRZ%29%2C beta subunit;protein_id=YP_002402673.1;transl_table=11
NC_011748.1	RefSeq	gene	1651566	1655306	.	-	.	ID=gene1633;Name=narZ;Dbxref=GeneID:7146979;gbkey=Gene;gene=narZ;locus_tag=EC55989_1599
NC_011748.1	RefSeq	CDS	1651566	1655306	.	-	0	ID=cds1529;Name=YP_002402674.1;Parent=gene1633;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 91042410%3B Product type e : enzyme;Dbxref=Genbank:YP_002402674.1,GeneID:7146979;gbkey=CDS;product=nitrate reductase 2 %28NRZ%29%2C alpha subunit;protein_id=YP_002402674.1;transl_table=11
NC_011748.1	RefSeq	gene	1655388	1656776	.	-	.	ID=gene1634;Name=narU;Dbxref=GeneID:7146980;gbkey=Gene;gene=narU;locus_tag=EC55989_1601
NC_011748.1	RefSeq	CDS	1655388	1656776	.	-	0	ID=cds1530;Name=YP_002402675.1;Parent=gene1634;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 95266795%2C 2233673%3B Product type t : transporter;Dbxref=Genbank:YP_002402675.1,GeneID:7146980;gbkey=CDS;product=nitrate%2Fnitrite transporter;protein_id=YP_002402675.1;transl_table=11
NC_011748.1	RefSeq	gene	1657100	1658431	.	-	.	ID=gene1635;Name=EC55989_1602;Dbxref=GeneID:7146975;gbkey=Gene;locus_tag=EC55989_1602
NC_011748.1	RefSeq	CDS	1657100	1658431	.	-	0	ID=cds1531;Name=YP_002402676.1;Parent=gene1635;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402676.1,GeneID:7146975;gbkey=CDS;product=glycoprotein with ribonuclease inhibitor domain %28yddK%29 %28modular protein%29;protein_id=YP_002402676.1;transl_table=11
NC_011748.1	RefSeq	gene	1658455	1658745	.	-	.	ID=gene1636;Name=yddL;Dbxref=GeneID:7144610;gbkey=Gene;gene=yddL;locus_tag=EC55989_1603
NC_011748.1	RefSeq	CDS	1658455	1658745	.	-	0	ID=cds1532;Name=YP_002402677.1;Parent=gene1636;Note=Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism%3B PubMedId : 7926834%3B Product type m : membrane component;Dbxref=Genbank:YP_002402677.1,GeneID:7144610;gbkey=CDS;product=outer membrane porin;protein_id=YP_002402677.1;transl_table=11
NC_011748.1	RefSeq	gene	1659004	1659828	.	-	.	ID=gene1637;Name=yddG;Dbxref=GeneID:7148412;gbkey=Gene;gene=yddG;locus_tag=EC55989_1604
NC_011748.1	RefSeq	CDS	1659004	1659828	.	-	0	ID=cds1533;Name=YP_002402678.1;Parent=gene1637;Note=Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism%3B PubMedId : 12410826%3B Product type t : transporter;Dbxref=Genbank:YP_002402678.1,GeneID:7148412;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402678.1;transl_table=11
NC_011748.1	RefSeq	gene	1660117	1663164	.	+	.	ID=gene1638;Name=fdnG;Dbxref=GeneID:7148410;gbkey=Gene;gene=fdnG;locus_tag=EC55989_1605
NC_011748.1	RefSeq	CDS	1660117	1663164	.	+	0	ID=cds1534;Name=YP_002402679.1;Parent=gene1638;Note=Evidence 1c : Function experimentally demonstrated in the studied genus%3B Product type e : enzyme;Dbxref=Genbank:YP_002402679.1,GeneID:7148410;gbkey=CDS;product=formate dehydrogenase-N subunit alpha%2C nitrate-inducible;protein_id=YP_002402679.1;transl_except=%28pos:1660702..1660704%2Caa%3DOTHER%29;transl_table=11
NC_011748.1	RefSeq	gene	1663177	1664061	.	+	.	ID=gene1639;Name=fdnH;Dbxref=GeneID:7146069;gbkey=Gene;gene=fdnH;locus_tag=EC55989_1607
NC_011748.1	RefSeq	CDS	1663177	1664061	.	+	0	ID=cds1535;Name=YP_002402680.1;Parent=gene1639;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 76005553%2C 90375017%2C 92332427%2C 11884747%2C 1834669%3B Product type c : carrier;Dbxref=Genbank:YP_002402680.1,GeneID:7146069;gbkey=CDS;product=formate dehydrogenase-N%2C Fe-S %28beta%29 subunit%2C nitrate-inducible;protein_id=YP_002402680.1;transl_table=11
NC_011748.1	RefSeq	gene	1664054	1664707	.	+	.	ID=gene1640;Name=fdnI;Dbxref=GeneID:7146070;gbkey=Gene;gene=fdnI;locus_tag=EC55989_1608
NC_011748.1	RefSeq	CDS	1664054	1664707	.	+	0	ID=cds1536;Name=YP_002402681.1;Parent=gene1640;Note=nitrate-inducible%2C cytochrome b556%28fdn%29 component of formate dehydrogenase;Dbxref=Genbank:YP_002402681.1,GeneID:7146070;gbkey=CDS;product=formate dehydrogenase-N subunit gamma;protein_id=YP_002402681.1;transl_table=11
NC_011748.1	RefSeq	gene	1664758	1665120	.	-	.	ID=gene1641;Name=yddM;Dbxref=GeneID:7146071;gbkey=Gene;gene=yddM;locus_tag=EC55989_1609
NC_011748.1	RefSeq	CDS	1664758	1665120	.	-	0	ID=cds1537;Name=YP_002402682.1;Parent=gene1641;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pr :  regulator;Dbxref=Genbank:YP_002402682.1,GeneID:7146071;gbkey=CDS;product=DNA-binding transcriptional regulator;protein_id=YP_002402682.1;transl_table=11
NC_011748.1	RefSeq	gene	1665189	1666199	.	-	.	ID=gene1642;Name=adhP;Dbxref=GeneID:7148413;gbkey=Gene;gene=adhP;locus_tag=EC55989_1610
NC_011748.1	RefSeq	CDS	1665189	1666199	.	-	0	ID=cds1538;Name=YP_002402683.1;Parent=gene1642;Note=similar to zinc-dependent eukaryotic ADH enzymes and distinct from fermentative ADHs;Dbxref=Genbank:YP_002402683.1,GeneID:7148413;gbkey=CDS;product=alcohol dehydrogenase;protein_id=YP_002402683.1;transl_table=11
NC_011748.1	RefSeq	gene	1666333	1668030	.	-	.	ID=gene1643;Name=sfcA;Dbxref=GeneID:7145456;gbkey=Gene;gene=sfcA;locus_tag=EC55989_1611
NC_011748.1	RefSeq	CDS	1666333	1668030	.	-	0	ID=cds1539;Name=YP_002402684.1;Parent=gene1643;Note=malic enzyme%3B oxaloacetate-decarboxylating%3B NAD-dependent%3B catalyzes the formation of pyruvate form malate;Dbxref=Genbank:YP_002402684.1,GeneID:7145456;gbkey=CDS;product=malate dehydrogenase;protein_id=YP_002402684.1;transl_table=11
NC_011748.1	RefSeq	gene	1668426	1668641	.	-	.	ID=gene1644;Name=bdm;Dbxref=GeneID:7147639;gbkey=Gene;gene=bdm;locus_tag=EC55989_1612
NC_011748.1	RefSeq	CDS	1668426	1668641	.	-	0	ID=cds1540;Name=YP_002402685.1;Parent=gene1644;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 10498711%2C 13129944%3B Product type f : factor;Dbxref=Genbank:YP_002402685.1,GeneID:7147639;gbkey=CDS;product=biofilm-dependent modulation protein;protein_id=YP_002402685.1;transl_table=11
NC_011748.1	RefSeq	gene	1668987	1669418	.	+	.	ID=gene1645;Name=osmC;Dbxref=GeneID:7145609;gbkey=Gene;gene=osmC;locus_tag=EC55989_1614
NC_011748.1	RefSeq	CDS	1668987	1669418	.	+	0	ID=cds1541;Name=YP_002402686.1;Parent=gene1645;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 14512736%2C 91350191%2C 9298646%3B Product type m : membrane component;Dbxref=Genbank:YP_002402686.1,GeneID:7145609;gbkey=CDS;product=osmotically inducible%2C stress-inducible membrane protein;protein_id=YP_002402686.1;transl_table=11
NC_011748.1	RefSeq	gene	1669474	1670400	.	-	.	ID=gene1646;Name=ddpF;Dbxref=GeneID:7147082;gbkey=Gene;gene=ddpF;locus_tag=EC55989_1615
NC_011748.1	RefSeq	CDS	1669474	1670400	.	-	0	ID=cds1542;Name=YP_002402687.1;Parent=gene1646;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 99432174%3B Product type t : transporter;Dbxref=Genbank:YP_002402687.1,GeneID:7147082;gbkey=CDS;product=D-ala-D-ala transporter subunit %3B ATP-binding component of ABC superfamily;protein_id=YP_002402687.1;transl_table=11
NC_011748.1	RefSeq	gene	1670393	1671379	.	-	.	ID=gene1647;Name=ddpD;Dbxref=GeneID:7145873;gbkey=Gene;gene=ddpD;locus_tag=EC55989_1616
NC_011748.1	RefSeq	CDS	1670393	1671379	.	-	0	ID=cds1543;Name=YP_002402688.1;Parent=gene1647;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 99432174%3B Product type t : transporter;Dbxref=Genbank:YP_002402688.1,GeneID:7145873;gbkey=CDS;product=D-ala-D-ala transporter subunit %3B ATP-binding component of ABC superfamily;protein_id=YP_002402688.1;transl_table=11
NC_011748.1	RefSeq	gene	1671376	1672272	.	-	.	ID=gene1648;Name=ddpC;Dbxref=GeneID:7145872;gbkey=Gene;gene=ddpC;locus_tag=EC55989_1617
NC_011748.1	RefSeq	CDS	1671376	1672272	.	-	0	ID=cds1544;Name=YP_002402689.1;Parent=gene1648;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 99432174%3B Product type t : transporter;Dbxref=Genbank:YP_002402689.1,GeneID:7145872;gbkey=CDS;product=ATP-dependent peptide transporter membrane subunit;protein_id=YP_002402689.1;transl_table=11
NC_011748.1	RefSeq	gene	1672269	1673291	.	-	.	ID=gene1649;Name=ddpB;Dbxref=GeneID:7145871;gbkey=Gene;gene=ddpB;locus_tag=EC55989_1618
NC_011748.1	RefSeq	CDS	1672269	1673291	.	-	0	ID=cds1545;Name=YP_002402690.1;Parent=gene1649;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 99432174%3B Product type t : transporter;Dbxref=Genbank:YP_002402690.1,GeneID:7145871;gbkey=CDS;product=D-ala-D-ala transporter subunit %3B membrane component of ABC superfamily;protein_id=YP_002402690.1;transl_table=11
NC_011748.1	RefSeq	gene	1673293	1674843	.	-	.	ID=gene1650;Name=ddpA;Dbxref=GeneID:7145870;gbkey=Gene;gene=ddpA;locus_tag=EC55989_1619
NC_011748.1	RefSeq	CDS	1673293	1674843	.	-	0	ID=cds1546;Name=YP_002402691.1;Parent=gene1650;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 99432174%3B Product type t : transporter;Dbxref=Genbank:YP_002402691.1,GeneID:7145870;gbkey=CDS;product=D-ala-D-a la transporter subunit %3B periplasmic-binding component of ABC superfamily;protein_id=YP_002402691.1;transl_table=11
NC_011748.1	RefSeq	gene	1674857	1675438	.	-	.	ID=gene1651;Name=ddpX;Dbxref=GeneID:7145869;gbkey=Gene;gene=ddpX;locus_tag=EC55989_1620
NC_011748.1	RefSeq	CDS	1674857	1675438	.	-	0	ID=cds1547;Name=YP_002402692.1;Parent=gene1651;Note=catalyzes the hydrolysis of D-alanyl-D-alanine dipeptide: Zn dependent%3B involved in peptidoglycan synthesis;Dbxref=Genbank:YP_002402692.1,GeneID:7145869;gbkey=CDS;product=D-alanyl-D-alanine dipeptidase;protein_id=YP_002402692.1;transl_table=11
NC_011748.1	RefSeq	gene	1675696	1678095	.	-	.	ID=gene1652;Name=dos;Dbxref=GeneID:7145874;gbkey=Gene;gene=dos;locus_tag=EC55989_1621
NC_011748.1	RefSeq	CDS	1675696	1678095	.	-	0	ID=cds1548;Name=YP_002402693.1;Parent=gene1652;Note=heme-regulated phosphodiesterase with phosphodiesterase activity with cAMP but not with cGMP%2C bis%28p-nitrophenyl%29 phosphate or p-nitrophenyl phosphate;Dbxref=Genbank:YP_002402693.1,GeneID:7145874;gbkey=CDS;product=cAMP phosphodiesterase;protein_id=YP_002402693.1;transl_table=11
NC_011748.1	RefSeq	gene	1678120	1679502	.	-	.	ID=gene1653;Name=yddV;Dbxref=GeneID:7145943;gbkey=Gene;gene=yddV;locus_tag=EC55989_1622
NC_011748.1	RefSeq	CDS	1678120	1679502	.	-	0	ID=cds1549;Name=YP_002402694.1;Parent=gene1653;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 16497924%2C 15142243%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002402694.1,GeneID:7145943;gbkey=CDS;product=diguanylate cyclase YddV;protein_id=YP_002402694.1;transl_table=11
NC_011748.1	RefSeq	gene	1679874	1681193	.	-	.	ID=gene1654;Name=yddW;Dbxref=GeneID:7148414;gbkey=Gene;gene=yddW;locus_tag=EC55989_1623
NC_011748.1	RefSeq	CDS	1679874	1681193	.	-	0	ID=cds1550;Name=YP_002402695.1;Parent=gene1654;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 10960106%3B Product type lp : lipoprotein;Dbxref=Genbank:YP_002402695.1,GeneID:7148414;gbkey=CDS;product=lipoprotein;protein_id=YP_002402695.1;transl_table=11
NC_011748.1	RefSeq	gene	1681324	1682859	.	-	.	ID=gene1655;Name=gadC;Dbxref=GeneID:7148415;gbkey=Gene;gene=gadC;locus_tag=EC55989_1624
NC_011748.1	RefSeq	CDS	1681324	1682859	.	-	0	ID=cds1551;Name=YP_002402696.1;Parent=gene1655;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 15795232%2C 15489450%3B Product type t : transporter;Dbxref=Genbank:YP_002402696.1,GeneID:7148415;gbkey=CDS;product=glutamate:gamma-aminobutyric acid antiporter;protein_id=YP_002402696.1;transl_table=11
NC_011748.1	RefSeq	gene	1683015	1684415	.	-	.	ID=gene1656;Name=gadB;Dbxref=GeneID:7146242;gbkey=Gene;gene=gadB;locus_tag=EC55989_1625
NC_011748.1	RefSeq	CDS	1683015	1684415	.	-	0	ID=cds1552;Name=YP_002402697.1;Parent=gene1656;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 12912902%2C 92155241%2C 92394884%2C 99406302%2C 8455549%3B Product type e : enzyme;Dbxref=Genbank:YP_002402697.1,GeneID:7146242;gbkey=CDS;product=glutamate decarboxylase;protein_id=YP_002402697.1;transl_table=11
NC_011748.1	RefSeq	gene	1684777	1687572	.	-	.	ID=gene1657;Name=pqqL;Dbxref=GeneID:7146241;gbkey=Gene;gene=pqqL;locus_tag=EC55989_1626
NC_011748.1	RefSeq	CDS	1684777	1687572	.	-	0	ID=cds1553;Name=YP_002402698.1;Parent=gene1657;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 1659611%2C 11514505%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002402698.1,GeneID:7146241;gbkey=CDS;product=membrane-associated peptidase;protein_id=YP_002402698.1;transl_table=11
NC_011748.1	RefSeq	gene	1687617	1689989	.	-	.	ID=gene1658;Name=yddB;Dbxref=GeneID:7147238;gbkey=Gene;gene=yddB;locus_tag=EC55989_1627
NC_011748.1	RefSeq	CDS	1687617	1689989	.	-	0	ID=cds1554;Name=YP_002402699.1;Parent=gene1658;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002402699.1,GeneID:7147238;gbkey=CDS;product=porin protein;protein_id=YP_002402699.1;transl_table=11
NC_011748.1	RefSeq	gene	1690027	1691712	.	-	.	ID=gene1659;Name=yddA;Dbxref=GeneID:7148408;gbkey=Gene;gene=yddA;locus_tag=EC55989_1628
NC_011748.1	RefSeq	CDS	1690027	1691712	.	-	0	ID=cds1555;Name=YP_002402700.1;Parent=gene1659;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002402700.1,GeneID:7148408;gbkey=CDS;product=multidrug transporter fused subunits of ABC superfamily transporter: permease component%3B ATP-binding component;protein_id=YP_002402700.1;transl_table=11
NC_011748.1	RefSeq	gene	1692003	1693160	.	-	.	ID=gene1660;Name=ydeM;Dbxref=GeneID:7148407;gbkey=Gene;gene=ydeM;locus_tag=EC55989_1629
NC_011748.1	RefSeq	CDS	1692003	1693160	.	-	0	ID=cds1556;Name=YP_002402701.1;Parent=gene1660;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pr :  regulator;Dbxref=Genbank:YP_002402701.1,GeneID:7148407;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402701.1;transl_table=11
NC_011748.1	RefSeq	gene	1693212	1694894	.	-	.	ID=gene1661;Name=ydeN;Dbxref=GeneID:7148421;gbkey=Gene;gene=ydeN;locus_tag=EC55989_1630
NC_011748.1	RefSeq	CDS	1693212	1694894	.	-	0	ID=cds1557;Name=YP_002402702.1;Parent=gene1661;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002402702.1,GeneID:7148421;gbkey=CDS;product=sulfatase;protein_id=YP_002402702.1;transl_table=11
NC_011748.1	RefSeq	gene	1695296	1696057	.	-	.	ID=gene1662;Name=ydeO;Dbxref=GeneID:7148422;gbkey=Gene;gene=ydeO;locus_tag=EC55989_1631
NC_011748.1	RefSeq	CDS	1695296	1696057	.	-	0	ID=cds1558;Name=YP_002402703.1;Parent=gene1662;Note=regulates the cellular response to acid resistance;Dbxref=Genbank:YP_002402703.1,GeneID:7148422;gbkey=CDS;product=transcriptional regulator YdeO;protein_id=YP_002402703.1;transl_table=11
NC_011748.1	RefSeq	gene	1696132	1696329	.	-	.	ID=gene1663;Name=EC55989_1632;Dbxref=GeneID:7148423;gbkey=Gene;locus_tag=EC55989_1632
NC_011748.1	RefSeq	CDS	1696132	1696329	.	-	0	ID=cds1559;Name=YP_002402704.1;Parent=gene1663;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402704.1,GeneID:7148423;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402704.1;transl_table=11
NC_011748.1	RefSeq	gene	1696577	1698856	.	-	.	ID=gene1664;Name=ydeP;Dbxref=GeneID:7144611;gbkey=Gene;gene=ydeP;locus_tag=EC55989_1633
NC_011748.1	RefSeq	CDS	1696577	1698856	.	-	0	ID=cds1560;Name=YP_002402705.1;Parent=gene1664;Note=in Escherichia coli it may be involved in repression of type III secretion system %28TTSS%29 genes of the host cell%3B involved with increased resistance to low pH%3B member of the prokaryotic molybdopterin-containing oxidoreductase family;Dbxref=Genbank:YP_002402705.1,GeneID:7144611;gbkey=CDS;product=oxidoreductase;protein_id=YP_002402705.1;transl_table=11
NC_011748.1	RefSeq	gene	1699190	1700104	.	-	.	ID=gene1665;Name=ydeQ;Dbxref=GeneID:7148424;gbkey=Gene;gene=ydeQ;locus_tag=EC55989_1634
NC_011748.1	RefSeq	CDS	1699190	1700104	.	-	0	ID=cds1561;Name=YP_002402706.1;Parent=gene1665;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type ps :  structure;Dbxref=Genbank:YP_002402706.1,GeneID:7148424;gbkey=CDS;product=fimbrial-like adhesin protein;protein_id=YP_002402706.1;transl_table=11
NC_011748.1	RefSeq	gene	1700163	1700666	.	-	.	ID=gene1666;Name=ydeR;Dbxref=GeneID:7148425;gbkey=Gene;gene=ydeR;locus_tag=EC55989_1635
NC_011748.1	RefSeq	CDS	1700163	1700666	.	-	0	ID=cds1562;Name=YP_002402707.1;Parent=gene1666;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type ps :  structure;Dbxref=Genbank:YP_002402707.1,GeneID:7148425;gbkey=CDS;product=fimbrial-like adhesin protein;protein_id=YP_002402707.1;transl_table=11
NC_011748.1	RefSeq	gene	1700679	1701209	.	-	.	ID=gene1667;Name=ydeS;Dbxref=GeneID:7148426;gbkey=Gene;gene=ydeS;locus_tag=EC55989_1636
NC_011748.1	RefSeq	CDS	1700679	1701209	.	-	0	ID=cds1563;Name=YP_002402708.1;Parent=gene1667;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type ps :  structure;Dbxref=Genbank:YP_002402708.1,GeneID:7148426;gbkey=CDS;product=fimbrial-like adhesin protein;protein_id=YP_002402708.1;transl_table=11
NC_011748.1	RefSeq	gene	1701223	1703874	.	-	.	ID=gene1668;Name=EC55989_1637;Dbxref=GeneID:7148427;gbkey=Gene;locus_tag=EC55989_1637
NC_011748.1	RefSeq	CDS	1701223	1703874	.	-	0	ID=cds1564;Name=YP_002402709.1;Parent=gene1668;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002402709.1,GeneID:7148427;gbkey=CDS;product=fimbrial outer membrane usher protein;protein_id=YP_002402709.1;transl_table=11
NC_011748.1	RefSeq	gene	1703916	1704635	.	-	.	ID=gene1669;Name=EC55989_1638;Dbxref=GeneID:7144612;gbkey=Gene;locus_tag=EC55989_1638
NC_011748.1	RefSeq	CDS	1703916	1704635	.	-	0	ID=cds1565;Name=YP_002402710.1;Parent=gene1669;Note=Evidence 2b : Function of strongly homologous gene%3B Product type f : factor;Dbxref=Genbank:YP_002402710.1,GeneID:7144612;gbkey=CDS;product=Periplasmic chaperone precursor;protein_id=YP_002402710.1;transl_table=11
NC_011748.1	RefSeq	gene	1704987	1705598	.	-	.	ID=gene1670;Name=EC55989_1639;Dbxref=GeneID:7144613;gbkey=Gene;locus_tag=EC55989_1639
NC_011748.1	RefSeq	CDS	1704987	1705598	.	-	0	ID=cds1566;Name=YP_002402711.1;Parent=gene1670;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type ps :  structure;Dbxref=Genbank:YP_002402711.1,GeneID:7144613;gbkey=CDS;product=major fimbrial subunit FmlA;protein_id=YP_002402711.1;transl_table=11
NC_011748.1	RefSeq	gene	1706006	1706185	.	-	.	ID=gene1671;Name=yneL;Dbxref=GeneID:7144614;gbkey=Gene;gene=yneL;locus_tag=EC55989_1640
NC_011748.1	RefSeq	CDS	1706006	1706185	.	-	0	ID=cds1567;Name=YP_002402712.1;Parent=gene1671;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pr :  regulator;Dbxref=Genbank:YP_002402712.1,GeneID:7144614;gbkey=CDS;product=transcriptional regulator;protein_id=YP_002402712.1;transl_table=11
NC_011748.1	RefSeq	gene	1706503	1707825	.	-	.	ID=gene1672;Name=hipA;Dbxref=GeneID:7149309;gbkey=Gene;gene=hipA;locus_tag=EC55989_1641
NC_011748.1	RefSeq	CDS	1706503	1707825	.	-	0	ID=cds1568;Name=YP_002402713.1;Parent=gene1672;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 91358364%2C 94292428%2C 15576765%3B Product type r : regulator;Dbxref=Genbank:YP_002402713.1,GeneID:7149309;gbkey=CDS;product=regulator with hipB;protein_id=YP_002402713.1;transl_table=11
NC_011748.1	RefSeq	gene	1707825	1708091	.	-	.	ID=gene1673;Name=hipB;Dbxref=GeneID:7146428;gbkey=Gene;gene=hipB;locus_tag=EC55989_1642
NC_011748.1	RefSeq	CDS	1707825	1708091	.	-	0	ID=cds1569;Name=YP_002402714.1;Parent=gene1673;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 91358364%2C 94292428%2C 15576765%2C 8021189%3B Product type r : regulator;Dbxref=Genbank:YP_002402714.1,GeneID:7146428;gbkey=CDS;product=DNA-binding transcriptional regulator HipB;protein_id=YP_002402714.1;transl_table=11
NC_011748.1	RefSeq	gene	1708300	1713720	.	-	.	ID=gene1674;Name=EC55989_1643;Dbxref=GeneID:7146429;gbkey=Gene;locus_tag=EC55989_1643
NC_011748.1	RefSeq	CDS	1708300	1713720	.	-	0	ID=cds1570;Name=YP_002402715.1;Parent=gene1674;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402715.1,GeneID:7146429;gbkey=CDS;product=lipoprotein%2Fautotransporter domain-containing protein;protein_id=YP_002402715.1;transl_table=11
NC_011748.1	RefSeq	gene	1714251	1715843	.	-	.	ID=gene1675;Name=lsrK;Dbxref=GeneID:7144615;gbkey=Gene;gene=lsrK;locus_tag=EC55989_1644
NC_011748.1	RefSeq	CDS	1714251	1715843	.	-	0	ID=cds1571;Name=YP_002402716.1;Parent=gene1675;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 15601708%2C 14622426%3B Product type e : enzyme;Dbxref=Genbank:YP_002402716.1,GeneID:7144615;gbkey=CDS;product=autoinducer-2 %28AI-2%29 kinase;protein_id=YP_002402716.1;transl_table=11
NC_011748.1	RefSeq	gene	1715922	1716875	.	-	.	ID=gene1676;Name=lsrR;Dbxref=GeneID:7146751;gbkey=Gene;gene=lsrR;locus_tag=EC55989_1645
NC_011748.1	RefSeq	CDS	1715922	1716875	.	-	0	ID=cds1572;Name=YP_002402717.1;Parent=gene1676;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 16321939%2C 15601708%2C 14622426%3B Product type r : regulator;Dbxref=Genbank:YP_002402717.1,GeneID:7146751;gbkey=CDS;product=DNA-binding transcriptional regulator;protein_id=YP_002402717.1;transl_table=11
NC_011748.1	RefSeq	gene	1717124	1718659	.	+	.	ID=gene1677;Name=ego;Dbxref=GeneID:7146752;gbkey=Gene;gene=ego;locus_tag=EC55989_1646
NC_011748.1	RefSeq	CDS	1717124	1718659	.	+	0	ID=cds1573;Name=YP_002402718.1;Parent=gene1677;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 12657059%2C 11722742%3B Product type t : transporter;Dbxref=Genbank:YP_002402718.1,GeneID:7146752;gbkey=CDS;product=fused AI2 transporter subunits of ABC superfamily: ATP-binding components;protein_id=YP_002402718.1;transl_table=11
NC_011748.1	RefSeq	gene	1718653	1719681	.	+	.	ID=gene1678;Name=lsrC;Dbxref=GeneID:7145982;gbkey=Gene;gene=lsrC;locus_tag=EC55989_1647
NC_011748.1	RefSeq	CDS	1718653	1719681	.	+	0	ID=cds1574;Name=YP_002402719.1;Parent=gene1678;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 11722742%3B Product type t : transporter;Dbxref=Genbank:YP_002402719.1,GeneID:7145982;gbkey=CDS;product=AI2 transporter %3B membrane component of ABC superfamily;protein_id=YP_002402719.1;transl_table=11
NC_011748.1	RefSeq	gene	1719681	1720673	.	+	.	ID=gene1679;Name=lsrD;Dbxref=GeneID:7146747;gbkey=Gene;gene=lsrD;locus_tag=EC55989_1648
NC_011748.1	RefSeq	CDS	1719681	1720673	.	+	0	ID=cds1575;Name=YP_002402720.1;Parent=gene1679;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 11722742%3B Product type t : transporter;Dbxref=Genbank:YP_002402720.1,GeneID:7146747;gbkey=CDS;product=AI2 transporter %3B membrane component of ABC superfamily;protein_id=YP_002402720.1;transl_table=11
NC_011748.1	RefSeq	gene	1720685	1721707	.	+	.	ID=gene1680;Name=lsrB;Dbxref=GeneID:7146748;gbkey=Gene;gene=lsrB;locus_tag=EC55989_1649
NC_011748.1	RefSeq	CDS	1720685	1721707	.	+	0	ID=cds1576;Name=YP_002402721.1;Parent=gene1680;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 11722742%3B Product type t : transporter;Dbxref=Genbank:YP_002402721.1,GeneID:7146748;gbkey=CDS;product=AI2 transporter %3B periplasmic-binding component of ABC superfamily;protein_id=YP_002402721.1;transl_table=11
NC_011748.1	RefSeq	gene	1721734	1722609	.	+	.	ID=gene1681;Name=lsrF;Dbxref=GeneID:7146746;gbkey=Gene;gene=lsrF;locus_tag=EC55989_1650
NC_011748.1	RefSeq	CDS	1721734	1722609	.	+	0	ID=cds1577;Name=YP_002402722.1;Parent=gene1681;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002402722.1,GeneID:7146746;gbkey=CDS;product=aldolase;protein_id=YP_002402722.1;transl_table=11
NC_011748.1	RefSeq	gene	1722633	1722923	.	+	.	ID=gene1682;Name=lsrG;Dbxref=GeneID:7146749;gbkey=Gene;gene=lsrG;locus_tag=EC55989_1651
NC_011748.1	RefSeq	CDS	1722633	1722923	.	+	0	ID=cds1578;Name=YP_002402723.1;Parent=gene1682;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402723.1,GeneID:7146749;gbkey=CDS;product=autoinducer-2 %28AI-2%29 modifying protein LsrG;protein_id=YP_002402723.1;transl_table=11
NC_011748.1	RefSeq	gene	1722980	1723738	.	+	.	ID=gene1683;Name=tam;Dbxref=GeneID:7146750;gbkey=Gene;gene=tam;locus_tag=EC55989_1652
NC_011748.1	RefSeq	CDS	1722980	1723738	.	+	0	ID=cds1579;Name=YP_002402724.1;Parent=gene1683;Note=catalyzes the formation of %28E%29-3-%28methoxycarbonyl%29pent-2-enedioate and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and trans-aconitate;Dbxref=Genbank:YP_002402724.1,GeneID:7146750;gbkey=CDS;product=trans-aconitate 2-methyltransferase;protein_id=YP_002402724.1;transl_table=11
NC_011748.1	RefSeq	gene	1723742	1724656	.	-	.	ID=gene1684;Name=yneE;Dbxref=GeneID:7147749;gbkey=Gene;gene=yneE;locus_tag=EC55989_1653
NC_011748.1	RefSeq	CDS	1723742	1724656	.	-	0	ID=cds1580;Name=YP_002402725.1;Parent=gene1684;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002402725.1,GeneID:7147749;gbkey=CDS;product=inner membrane protein;protein_id=YP_002402725.1;transl_table=11
NC_011748.1	RefSeq	gene	1724863	1726314	.	-	.	ID=gene1685;Name=uxaB;Dbxref=GeneID:7149300;gbkey=Gene;gene=uxaB;locus_tag=EC55989_1654
NC_011748.1	RefSeq	CDS	1724863	1726314	.	-	0	ID=cds1581;Name=YP_002402726.1;Parent=gene1685;Note=catalyzes the formation of D-tagaturonate from D-altronate;Dbxref=Genbank:YP_002402726.1,GeneID:7149300;gbkey=CDS;product=altronate oxidoreductase;protein_id=YP_002402726.1;transl_table=11
NC_011748.1	RefSeq	gene	1726541	1727959	.	-	.	ID=gene1686;Name=yneF;Dbxref=GeneID:7147939;gbkey=Gene;gene=yneF;locus_tag=EC55989_1655
NC_011748.1	RefSeq	CDS	1726541	1727959	.	-	0	ID=cds1582;Name=YP_002402727.1;Parent=gene1686;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002402727.1,GeneID:7147939;gbkey=CDS;product=membrane-associated diguanylate cyclase %28GGDEF domain%29;protein_id=YP_002402727.1;transl_table=11
NC_011748.1	RefSeq	gene	1728098	1728457	.	-	.	ID=gene1687;Name=yneG;Dbxref=GeneID:7149301;gbkey=Gene;gene=yneG;locus_tag=EC55989_1656
NC_011748.1	RefSeq	CDS	1728098	1728457	.	-	0	ID=cds1583;Name=YP_002402728.1;Parent=gene1687;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402728.1,GeneID:7149301;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402728.1;transl_table=11
NC_011748.1	RefSeq	gene	1728457	1729383	.	-	.	ID=gene1688;Name=yneH;Dbxref=GeneID:7149302;gbkey=Gene;gene=yneH;locus_tag=EC55989_1657
NC_011748.1	RefSeq	CDS	1728457	1729383	.	-	0	ID=cds1584;Name=YP_002402729.1;Parent=gene1688;Note=catalyzes the formation of glutamate from glutamine;Dbxref=Genbank:YP_002402729.1,GeneID:7149302;gbkey=CDS;product=glutaminase;protein_id=YP_002402729.1;transl_table=11
NC_011748.1	RefSeq	gene	1729447	1730835	.	-	.	ID=gene1689;Name=yneI;Dbxref=GeneID:7149303;gbkey=Gene;gene=yneI;locus_tag=EC55989_1658
NC_011748.1	RefSeq	CDS	1729447	1730835	.	-	0	ID=cds1585;Name=YP_002402730.1;Parent=gene1689;Note=in Escherichia coli this enzyme appears to be an NAD%2B%2FNADP%2B-dependent succinate semialdehyde dehydrogenase;Dbxref=Genbank:YP_002402730.1,GeneID:7149303;gbkey=CDS;product=succinate semialdehyde dehydrogenase;protein_id=YP_002402730.1;transl_table=11
NC_011748.1	RefSeq	gene	1730936	1731817	.	+	.	ID=gene1690;Name=yneJ;Dbxref=GeneID:7149304;gbkey=Gene;gene=yneJ;locus_tag=EC55989_1659
NC_011748.1	RefSeq	CDS	1730936	1731817	.	+	0	ID=cds1586;Name=YP_002402731.1;Parent=gene1690;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pr :  regulator;Dbxref=Genbank:YP_002402731.1,GeneID:7149304;gbkey=CDS;product=DNA-binding transcriptional regulator;protein_id=YP_002402731.1;transl_table=11
NC_011748.1	RefSeq	gene	1731895	1732353	.	+	.	ID=gene1691;Name=yneK;Dbxref=GeneID:7149305;gbkey=Gene;gene=yneK;locus_tag=EC55989_1660;pseudo=true
NC_011748.1	RefSeq	region	1731895	1732353	.	+	.	ID=id122;Note=fragment of conserved hypothetical protein %28part 1%29%3BEvidence 7 : Gene remnant;Dbxref=GeneID:7149305;gbkey=misc_feature
NC_011748.1	RefSeq	gene	1732302	1732787	.	+	.	ID=gene1692;Name=yneK;Dbxref=GeneID:7149306;gbkey=Gene;gene=yneK;locus_tag=EC55989_1661;pseudo=true
NC_011748.1	RefSeq	region	1732302	1732787	.	+	.	ID=id123;Note=fragment of conserved hypothetical protein %28part 2%29%3BEvidence 7 : Gene remnant;Dbxref=GeneID:7149306;gbkey=misc_feature
NC_011748.1	RefSeq	gene	1732760	1733008	.	+	.	ID=gene1693;Name=yneK;Dbxref=GeneID:7149307;gbkey=Gene;gene=yneK;locus_tag=EC55989_1662;pseudo=true
NC_011748.1	RefSeq	region	1732760	1733008	.	+	.	ID=id124;Note=fragment of conserved hypothetical protein %28part 3%29%3BEvidence 7 : Gene remnant;Dbxref=GeneID:7149307;gbkey=misc_feature
NC_011748.1	RefSeq	gene	1733158	1734348	.	+	.	ID=gene1694;Name=ydeA;Dbxref=GeneID:7149308;gbkey=Gene;gene=ydeA;locus_tag=EC55989_1663
NC_011748.1	RefSeq	CDS	1733158	1734348	.	+	0	ID=cds1587;Name=YP_002402732.1;Parent=gene1694;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 10094697%2C 99369894%2C 8383113%2C 10438792%3B Product type t : transporter;Dbxref=Genbank:YP_002402732.1,GeneID:7149308;gbkey=CDS;product=sugar efflux transporter;protein_id=YP_002402732.1;transl_table=11
NC_011748.1	RefSeq	gene	1734373	1735038	.	-	.	ID=gene1695;Name=marC;Dbxref=GeneID:7148416;gbkey=Gene;gene=marC;locus_tag=EC55989_1664
NC_011748.1	RefSeq	CDS	1734373	1735038	.	-	0	ID=cds1588;Name=YP_002402733.1;Parent=gene1695;Note=protein involved in resistance to different drugs %28tetracycline%2C chloramphenicol%2C beta-lactams%2C and quinolones%29%3B part of the multiple antibiotic resistance %28mar%29 locus%2C which is composed by the genes marC and marRAB%3B unknown function;Dbxref=Genbank:YP_002402733.1,GeneID:7148416;gbkey=CDS;product=multiple drug resistance protein MarC;protein_id=YP_002402733.1;transl_table=11
NC_011748.1	RefSeq	gene	1735250	1735684	.	+	.	ID=gene1696;Name=marR;Dbxref=GeneID:7146789;gbkey=Gene;gene=marR;locus_tag=EC55989_1665
NC_011748.1	RefSeq	CDS	1735250	1735684	.	+	0	ID=cds1589;Name=YP_002402734.1;Parent=gene1696;Note=Repressor of the marRAB operon which is involved in the activation of both antibiotic resistance and oxidative stress genes;Dbxref=Genbank:YP_002402734.1,GeneID:7146789;gbkey=CDS;product=DNA-binding transcriptional repressor MarR;protein_id=YP_002402734.1;transl_table=11
NC_011748.1	RefSeq	gene	1735704	1736087	.	+	.	ID=gene1697;Name=marA;Dbxref=GeneID:7146790;gbkey=Gene;gene=marA;locus_tag=EC55989_1666
NC_011748.1	RefSeq	CDS	1735704	1736087	.	+	0	ID=cds1590;Name=YP_002402735.1;Parent=gene1697;Note=transcriptional activator of genes involved in the multiple antibiotic resistance %28Mar%29 phenotype%3B also activates sodA%2C zwf and micF;Dbxref=Genbank:YP_002402735.1,GeneID:7146790;gbkey=CDS;product=DNA-binding transcriptional activator MarA;protein_id=YP_002402735.1;transl_table=11
NC_011748.1	RefSeq	gene	1736119	1736337	.	+	.	ID=gene1698;Name=marB;Dbxref=GeneID:7146787;gbkey=Gene;gene=marB;locus_tag=EC55989_1667
NC_011748.1	RefSeq	CDS	1736119	1736337	.	+	0	ID=cds1591;Name=YP_002402736.1;Parent=gene1698;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 8383113;Dbxref=Genbank:YP_002402736.1,GeneID:7146787;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402736.1;transl_table=11
NC_011748.1	RefSeq	gene	1736394	1737839	.	-	.	ID=gene1699;Name=celA;Dbxref=GeneID:7146788;gbkey=Gene;gene=celA;locus_tag=EC55989_1668
NC_011748.1	RefSeq	CDS	1736394	1737839	.	-	0	ID=cds1592;Name=YP_002402737.1;Parent=gene1699;Note=converts 6-phospho-beta-D-glucosyl-%281%2C4%29-D-glucose to glucose and glucose 6-phosphate%3B required for cellobiose uptake and metabolism;Dbxref=Genbank:YP_002402737.1,GeneID:7146788;gbkey=CDS;product=6-phospho-beta-glucosidase;protein_id=YP_002402737.1;transl_table=11
NC_011748.1	RefSeq	gene	1737858	1739531	.	-	.	ID=gene1700;Name=EC55989_1669;Dbxref=GeneID:7144616;gbkey=Gene;locus_tag=EC55989_1669
NC_011748.1	RefSeq	CDS	1737858	1739531	.	-	0	ID=cds1593;Name=YP_002402738.1;Parent=gene1700;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002402738.1,GeneID:7144616;gbkey=CDS;product=carbohydrate-specific outer membrane porin;protein_id=YP_002402738.1;transl_table=11
NC_011748.1	RefSeq	gene	1739587	1739901	.	-	.	ID=gene1701;Name=EC55989_1670;Dbxref=GeneID:7144617;gbkey=Gene;locus_tag=EC55989_1670
NC_011748.1	RefSeq	CDS	1739587	1739901	.	-	0	ID=cds1594;Name=YP_002402739.1;Parent=gene1701;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002402739.1,GeneID:7144617;gbkey=CDS;product=PTS system lactose%2Fcellobiose-specific transporter subunit IIA;protein_id=YP_002402739.1;transl_table=11
NC_011748.1	RefSeq	gene	1739926	1741287	.	-	.	ID=gene1702;Name=EC55989_1671;Dbxref=GeneID:7144618;gbkey=Gene;locus_tag=EC55989_1671
NC_011748.1	RefSeq	CDS	1739926	1741287	.	-	0	ID=cds1595;Name=YP_002402740.1;Parent=gene1702;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002402740.1,GeneID:7144618;gbkey=CDS;product=PTS system transporter subunit IIC;protein_id=YP_002402740.1;transl_table=11
NC_011748.1	RefSeq	gene	1741363	1741674	.	-	.	ID=gene1703;Name=EC55989_1672;Dbxref=GeneID:7144619;gbkey=Gene;locus_tag=EC55989_1672
NC_011748.1	RefSeq	CDS	1741363	1741674	.	-	0	ID=cds1596;Name=YP_002402741.1;Parent=gene1703;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002402741.1,GeneID:7144619;gbkey=CDS;product=cellobiose-specific phosphotransferase enzyme IIB component;protein_id=YP_002402741.1;transl_table=11
NC_011748.1	RefSeq	gene	1741873	1742571	.	+	.	ID=gene1704;Name=EC55989_1673;Dbxref=GeneID:7144620;gbkey=Gene;locus_tag=EC55989_1673
NC_011748.1	RefSeq	CDS	1741873	1742571	.	+	0	ID=cds1597;Name=YP_002402742.1;Parent=gene1704;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pr :  regulator;Dbxref=Genbank:YP_002402742.1,GeneID:7144620;gbkey=CDS;product=DNA-binding transcriptional regulator HTH family;protein_id=YP_002402742.1;transl_table=11
NC_011748.1	RefSeq	gene	1742616	1743515	.	-	.	ID=gene1705;Name=eamA;Dbxref=GeneID:7144621;gbkey=Gene;gene=eamA;locus_tag=EC55989_1674
NC_011748.1	RefSeq	CDS	1742616	1743515	.	-	0	ID=cds1598;Name=YP_002402743.1;Parent=gene1705;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 20305052%3B Product type t : transporter;Dbxref=Genbank:YP_002402743.1,GeneID:7144621;gbkey=CDS;product=O-acetylserine%2Fcysteine export protein;protein_id=YP_002402743.1;transl_table=11
NC_011748.1	RefSeq	gene	1743710	1744897	.	+	.	ID=gene1706;Name=ydeE;Dbxref=GeneID:7145966;gbkey=Gene;gene=ydeE;locus_tag=EC55989_1675
NC_011748.1	RefSeq	CDS	1743710	1744897	.	+	0	ID=cds1599;Name=YP_002402744.1;Parent=gene1706;Note=YdeF%3B uncharacterized member of the major facilitator superfamily %28MFS%29 of transporters;Dbxref=Genbank:YP_002402744.1,GeneID:7145966;gbkey=CDS;product=MFS-type transporter YdeE;protein_id=YP_002402744.1;transl_table=11
NC_011748.1	RefSeq	gene	1745339	1746229	.	-	.	ID=gene1707;Name=ydeH;Dbxref=GeneID:7148417;gbkey=Gene;gene=ydeH;locus_tag=EC55989_1676
NC_011748.1	RefSeq	CDS	1745339	1746229	.	-	0	ID=cds1600;Name=YP_002402745.1;Parent=gene1707;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402745.1,GeneID:7148417;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402745.1;transl_table=11
NC_011748.1	RefSeq	gene	1746484	1746876	.	-	.	ID=gene1708;Name=ydeI;Dbxref=GeneID:7148418;gbkey=Gene;gene=ydeI;locus_tag=EC55989_1677
NC_011748.1	RefSeq	CDS	1746484	1746876	.	-	0	ID=cds1601;Name=YP_002402746.1;Parent=gene1708;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402746.1,GeneID:7148418;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402746.1;transl_table=11
NC_011748.1	RefSeq	gene	1747152	1747670	.	+	.	ID=gene1709;Name=ydeJ;Dbxref=GeneID:7148419;gbkey=Gene;gene=ydeJ;locus_tag=EC55989_1678
NC_011748.1	RefSeq	CDS	1747152	1747670	.	+	0	ID=cds1602;Name=YP_002402747.1;Parent=gene1709;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402747.1,GeneID:7148419;gbkey=CDS;product=competence damage-inducible protein A;protein_id=YP_002402747.1;transl_table=11
NC_011748.1	RefSeq	gene	1747715	1749760	.	-	.	ID=gene1710;Name=dcp;Dbxref=GeneID:7148420;gbkey=Gene;gene=dcp;locus_tag=EC55989_1679
NC_011748.1	RefSeq	CDS	1747715	1749760	.	-	0	ID=cds1603;Name=YP_002402748.1;Parent=gene1710;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 216006%2C 8226676%3B Product type e : enzyme;Dbxref=Genbank:YP_002402748.1,GeneID:7148420;gbkey=CDS;product=dipeptidyl carboxypeptidase II;protein_id=YP_002402748.1;transl_table=11
NC_011748.1	RefSeq	gene	1749897	1750643	.	+	.	ID=gene1711;Name=ydfG;Dbxref=GeneID:7145857;gbkey=Gene;gene=ydfG;locus_tag=EC55989_1680
NC_011748.1	RefSeq	CDS	1749897	1750643	.	+	0	ID=cds1604;Name=YP_002402749.1;Parent=gene1711;Note=NADP%28%2B%29-dependent%3B catalyzes the formation of 2-aminomalonate-semialdehyde from L-serine%3B can also use 3-hydroxybutyrate%2C 3-hydroxy-isobutyrate%2C D-threonine%2C L-allo-threonine%2CD-serine;Dbxref=Genbank:YP_002402749.1,GeneID:7145857;gbkey=CDS;product=3-hydroxy acid dehydrogenase;protein_id=YP_002402749.1;transl_table=11
NC_011748.1	RefSeq	gene	1750732	1751418	.	+	.	ID=gene1712;Name=ydfH;Dbxref=GeneID:7148434;gbkey=Gene;gene=ydfH;locus_tag=EC55989_1681
NC_011748.1	RefSeq	CDS	1750732	1751418	.	+	0	ID=cds1605;Name=YP_002402750.1;Parent=gene1712;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pr :  regulator;Dbxref=Genbank:YP_002402750.1,GeneID:7148434;gbkey=CDS;product=DNA-binding transcriptional regulator;protein_id=YP_002402750.1;transl_table=11
NC_011748.1	RefSeq	gene	1751596	1751799	.	+	.	ID=gene1713;Name=ydfZ;Dbxref=GeneID:7148435;gbkey=Gene;gene=ydfZ;locus_tag=EC55989_1682
NC_011748.1	RefSeq	CDS	1751596	1751799	.	+	0	ID=cds1606;Name=YP_002402751.1;Parent=gene1713;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 12084818%3B Product type pc :  carrier;Dbxref=Genbank:YP_002402751.1,GeneID:7148435;gbkey=CDS;product=selenium carrying protein;protein_id=YP_002402751.1;transl_table=11
NC_011748.1	RefSeq	gene	1751835	1753295	.	-	.	ID=gene1714;Name=ydfI;Dbxref=GeneID:7148445;gbkey=Gene;gene=ydfI;locus_tag=EC55989_1683
NC_011748.1	RefSeq	CDS	1751835	1753295	.	-	0	ID=cds1607;Name=YP_002402752.1;Parent=gene1714;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002402752.1,GeneID:7148445;gbkey=CDS;product=mannonate dehydrogenase;protein_id=YP_002402752.1;transl_table=11
NC_011748.1	RefSeq	gene	1753384	1754667	.	-	.	ID=gene1715;Name=ydfJ;Dbxref=GeneID:7148436;gbkey=Gene;gene=ydfJ;locus_tag=EC55989_1684
NC_011748.1	RefSeq	CDS	1753384	1754667	.	-	0	ID=cds1608;Name=YP_002402753.1;Parent=gene1715;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002402753.1,GeneID:7148436;gbkey=CDS;product=transporter;protein_id=YP_002402753.1;transl_table=11
NC_011748.1	RefSeq	gene	1755403	1755585	.	+	.	ID=gene1716;Name=yciG;Dbxref=GeneID:7148437;gbkey=Gene;gene=yciG;locus_tag=EC55989_1686
NC_011748.1	RefSeq	CDS	1755403	1755585	.	+	0	ID=cds1609;Name=YP_002402754.1;Parent=gene1716;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402754.1,GeneID:7148437;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402754.1;transl_table=11
NC_011748.1	RefSeq	gene	1755658	1756164	.	+	.	ID=gene1717;Name=yciF;Dbxref=GeneID:7148344;gbkey=Gene;gene=yciF;locus_tag=EC55989_1687
NC_011748.1	RefSeq	CDS	1755658	1756164	.	+	0	ID=cds1610;Name=YP_002402755.1;Parent=gene1717;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 3058546%2C 8455549;Dbxref=Genbank:YP_002402755.1,GeneID:7148344;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402755.1;transl_table=11
NC_011748.1	RefSeq	gene	1756201	1756707	.	+	.	ID=gene1718;Name=yciE;Dbxref=GeneID:7148342;gbkey=Gene;gene=yciE;locus_tag=EC55989_1688
NC_011748.1	RefSeq	CDS	1756201	1756707	.	+	0	ID=cds1611;Name=YP_002402756.1;Parent=gene1718;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 15388941%2C 3058546%2C 8455549;Dbxref=Genbank:YP_002402756.1,GeneID:7148342;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402756.1;transl_table=11
NC_011748.1	RefSeq	gene	1756726	1757616	.	+	.	ID=gene1719;Name=EC55989_1689;Dbxref=GeneID:7148340;gbkey=Gene;locus_tag=EC55989_1689
NC_011748.1	RefSeq	CDS	1756726	1757616	.	+	0	ID=cds1612;Name=YP_002402757.1;Parent=gene1719;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402757.1,GeneID:7148340;gbkey=CDS;product=Manganese Catalase of prophage;protein_id=YP_002402757.1;transl_table=11
NC_011748.1	RefSeq	gene	1757736	1758317	.	-	.	ID=gene1720;Name=tfaQ;Dbxref=GeneID:7144622;gbkey=Gene;gene=tfaQ;locus_tag=EC55989_1690
NC_011748.1	RefSeq	CDS	1757736	1758317	.	-	0	ID=cds1613;Name=YP_002402758.1;Parent=gene1720;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pf :  factor;Dbxref=Genbank:YP_002402758.1,GeneID:7144622;gbkey=CDS;product=tail fiber chaperone%3B Qin prophage;protein_id=YP_002402758.1;transl_table=11
NC_011748.1	RefSeq	gene	1758317	1761280	.	-	.	ID=gene1721;Name=EC55989_1691;Dbxref=GeneID:7147779;gbkey=Gene;locus_tag=EC55989_1691
NC_011748.1	RefSeq	CDS	1758317	1761280	.	-	0	ID=cds1614;Name=YP_002402759.1;Parent=gene1721;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402759.1,GeneID:7147779;gbkey=CDS;product=tail fiber protein;protein_id=YP_002402759.1;transl_table=11
NC_011748.1	RefSeq	gene	1761345	1761944	.	-	.	ID=gene1722;Name=EC55989_1692;Dbxref=GeneID:7144623;gbkey=Gene;locus_tag=EC55989_1692
NC_011748.1	RefSeq	CDS	1761345	1761944	.	-	0	ID=cds1615;Name=YP_002402760.1;Parent=gene1722;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402760.1,GeneID:7144623;gbkey=CDS;product=Lom-like outer membrane protein of phage origin;protein_id=YP_002402760.1;transl_table=11
NC_011748.1	RefSeq	gene	1762014	1765427	.	-	.	ID=gene1723;Name=EC55989_1693;Dbxref=GeneID:7144624;gbkey=Gene;locus_tag=EC55989_1693
NC_011748.1	RefSeq	CDS	1762014	1765427	.	-	0	ID=cds1616;Name=YP_002402761.1;Parent=gene1723;Note=Evidence 2b : Function of strongly homologous gene%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402761.1,GeneID:7144624;gbkey=CDS;product=Host specificity protein J;protein_id=YP_002402761.1;transl_table=11
NC_011748.1	RefSeq	gene	1765488	1766135	.	-	.	ID=gene1724;Name=EC55989_1694;Dbxref=GeneID:7144625;gbkey=Gene;locus_tag=EC55989_1694
NC_011748.1	RefSeq	CDS	1765488	1766135	.	-	0	ID=cds1617;Name=YP_002402762.1;Parent=gene1724;Note=Evidence 2b : Function of strongly homologous gene%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402762.1,GeneID:7144625;gbkey=CDS;product=Tail assembly protein I from prophage;protein_id=YP_002402762.1;transl_table=11
NC_011748.1	RefSeq	gene	1766033	1766776	.	-	.	ID=gene1725;Name=EC55989_1695;Dbxref=GeneID:7144626;gbkey=Gene;locus_tag=EC55989_1695
NC_011748.1	RefSeq	CDS	1766033	1766776	.	-	0	ID=cds1618;Name=YP_002402763.1;Parent=gene1725;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402763.1,GeneID:7144626;gbkey=CDS;product=tail fiber component K of prophage;protein_id=YP_002402763.1;transl_table=11
NC_011748.1	RefSeq	gene	1766782	1767480	.	-	.	ID=gene1726;Name=EC55989_1696;Dbxref=GeneID:7144627;gbkey=Gene;locus_tag=EC55989_1696
NC_011748.1	RefSeq	CDS	1766782	1767480	.	-	0	ID=cds1619;Name=YP_002402764.1;Parent=gene1726;Note=Evidence 2b : Function of strongly homologous gene%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402764.1,GeneID:7144627;gbkey=CDS;product=Minor tail protein L;protein_id=YP_002402764.1;transl_table=11
NC_011748.1	RefSeq	gene	1767490	1767819	.	-	.	ID=gene1727;Name=EC55989_1697;Dbxref=GeneID:7144628;gbkey=Gene;locus_tag=EC55989_1697
NC_011748.1	RefSeq	CDS	1767490	1767819	.	-	0	ID=cds1620;Name=YP_002402765.1;Parent=gene1727;Note=Evidence 2b : Function of strongly homologous gene%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402765.1,GeneID:7144628;gbkey=CDS;product=Minor tail protein M;protein_id=YP_002402765.1;transl_table=11
NC_011748.1	RefSeq	gene	1767819	1770905	.	-	.	ID=gene1728;Name=EC55989_1698;Dbxref=GeneID:7144629;gbkey=Gene;locus_tag=EC55989_1698
NC_011748.1	RefSeq	CDS	1767819	1770905	.	-	0	ID=cds1621;Name=YP_002402766.1;Parent=gene1728;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402766.1,GeneID:7144629;gbkey=CDS;product=tail length tape measure protein from prophage;protein_id=YP_002402766.1;transl_table=11
NC_011748.1	RefSeq	gene	1770847	1771176	.	-	.	ID=gene1729;Name=EC55989_1699;Dbxref=GeneID:7144630;gbkey=Gene;locus_tag=EC55989_1699
NC_011748.1	RefSeq	CDS	1770847	1771176	.	-	0	ID=cds1622;Name=YP_002402767.1;Parent=gene1729;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402767.1,GeneID:7144630;gbkey=CDS;product=minor tail protein T of prophage;protein_id=YP_002402767.1;transl_table=11
NC_011748.1	RefSeq	gene	1771185	1771613	.	-	.	ID=gene1730;Name=EC55989_1700;Dbxref=GeneID:7144631;gbkey=Gene;locus_tag=EC55989_1700
NC_011748.1	RefSeq	CDS	1771185	1771613	.	-	0	ID=cds1623;Name=YP_002402768.1;Parent=gene1730;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402768.1,GeneID:7144631;gbkey=CDS;product=minor tail component of prophage;protein_id=YP_002402768.1;transl_table=11
NC_011748.1	RefSeq	gene	1771632	1772450	.	-	.	ID=gene1731;Name=EC55989_1701;Dbxref=GeneID:7144639;gbkey=Gene;locus_tag=EC55989_1701
NC_011748.1	RefSeq	CDS	1771632	1772450	.	-	0	ID=cds1624;Name=YP_002402769.1;Parent=gene1731;Note=Evidence 2b : Function of strongly homologous gene%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402769.1,GeneID:7144639;gbkey=CDS;product=Major tail protein V;protein_id=YP_002402769.1;transl_table=11
NC_011748.1	RefSeq	gene	1772386	1772799	.	-	.	ID=gene1732;Name=EC55989_1702;Dbxref=GeneID:7144640;gbkey=Gene;locus_tag=EC55989_1702
NC_011748.1	RefSeq	CDS	1772386	1772799	.	-	0	ID=cds1625;Name=YP_002402770.1;Parent=gene1732;Note=Evidence 2b : Function of strongly homologous gene%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402770.1,GeneID:7144640;gbkey=CDS;product=Minor tail protein U;protein_id=YP_002402770.1;transl_table=11
NC_011748.1	RefSeq	gene	1772784	1773362	.	-	.	ID=gene1733;Name=EC55989_1703;Dbxref=GeneID:7144641;gbkey=Gene;locus_tag=EC55989_1703
NC_011748.1	RefSeq	CDS	1772784	1773362	.	-	0	ID=cds1626;Name=YP_002402771.1;Parent=gene1733;Note=Evidence 2b : Function of strongly homologous gene%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402771.1,GeneID:7144641;gbkey=CDS;product=Minor tail protein Z %28GPZ%29 of prophage;protein_id=YP_002402771.1;transl_table=11
NC_011748.1	RefSeq	gene	1773374	1773649	.	-	.	ID=gene1734;Name=EC55989_1704;Dbxref=GeneID:7144642;gbkey=Gene;locus_tag=EC55989_1704
NC_011748.1	RefSeq	CDS	1773374	1773649	.	-	0	ID=cds1627;Name=YP_002402772.1;Parent=gene1734;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402772.1,GeneID:7144642;gbkey=CDS;product=prophage protein;protein_id=YP_002402772.1;transl_table=11
NC_011748.1	RefSeq	gene	1773642	1774010	.	-	.	ID=gene1735;Name=EC55989_1705;Dbxref=GeneID:7144643;gbkey=Gene;locus_tag=EC55989_1705
NC_011748.1	RefSeq	CDS	1773642	1774010	.	-	0	ID=cds1628;Name=YP_002402773.1;Parent=gene1735;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402773.1,GeneID:7144643;gbkey=CDS;product=prophage protein;protein_id=YP_002402773.1;transl_table=11
NC_011748.1	RefSeq	gene	1774052	1776271	.	-	.	ID=gene1736;Name=EC55989_1706;Dbxref=GeneID:7144644;gbkey=Gene;locus_tag=EC55989_1706
NC_011748.1	RefSeq	CDS	1774052	1776271	.	-	0	ID=cds1629;Name=YP_002402774.1;Parent=gene1736;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402774.1,GeneID:7144644;gbkey=CDS;product=ATP-dependent Clp protease proteolytic subunit;protein_id=YP_002402774.1;transl_table=11
NC_011748.1	RefSeq	gene	1776024	1777604	.	-	.	ID=gene1737;Name=EC55989_1707;Dbxref=GeneID:7144645;gbkey=Gene;locus_tag=EC55989_1707
NC_011748.1	RefSeq	CDS	1776024	1777604	.	-	0	ID=cds1630;Name=YP_002402775.1;Parent=gene1737;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402775.1,GeneID:7144645;gbkey=CDS;product=portal protein %28head-tail preconnector protein%29 from prophage;protein_id=YP_002402775.1;transl_table=11
NC_011748.1	RefSeq	gene	1777532	1777750	.	-	.	ID=gene1738;Name=EC55989_1708;Dbxref=GeneID:7144646;gbkey=Gene;locus_tag=EC55989_1708
NC_011748.1	RefSeq	CDS	1777532	1777750	.	-	0	ID=cds1631;Name=YP_002402776.1;Parent=gene1738;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402776.1,GeneID:7144646;gbkey=CDS;product=prophage protein;protein_id=YP_002402776.1;transl_table=11
NC_011748.1	RefSeq	gene	1777741	1779843	.	-	.	ID=gene1739;Name=EC55989_1709;Dbxref=GeneID:7144647;gbkey=Gene;locus_tag=EC55989_1709
NC_011748.1	RefSeq	CDS	1777741	1779843	.	-	0	ID=cds1632;Name=YP_002402777.1;Parent=gene1739;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402777.1,GeneID:7144647;gbkey=CDS;product=DNA packaging protein of prophage %28 terminase large subunit%29;protein_id=YP_002402777.1;transl_table=11
NC_011748.1	RefSeq	gene	1779843	1780337	.	-	.	ID=gene1740;Name=EC55989_1710;Dbxref=GeneID:7144648;gbkey=Gene;locus_tag=EC55989_1710
NC_011748.1	RefSeq	CDS	1779843	1780337	.	-	0	ID=cds1633;Name=YP_002402778.1;Parent=gene1740;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402778.1,GeneID:7144648;gbkey=CDS;product=prophage protein;protein_id=YP_002402778.1;transl_table=11
NC_011748.1	RefSeq	gene	1780890	1781096	.	-	.	ID=gene1741;Name=EC55989_1711;Dbxref=GeneID:7144649;gbkey=Gene;locus_tag=EC55989_1711
NC_011748.1	RefSeq	CDS	1780890	1781096	.	-	0	ID=cds1634;Name=YP_002402779.1;Parent=gene1741;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402779.1,GeneID:7144649;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402779.1;transl_table=11
NC_011748.1	RefSeq	gene	1781384	1781794	.	+	.	ID=gene1742;Name=ydfO;Dbxref=GeneID:7144650;gbkey=Gene;gene=ydfO;locus_tag=EC55989_1712
NC_011748.1	RefSeq	CDS	1781384	1781794	.	+	0	ID=cds1635;Name=YP_002402780.1;Parent=gene1742;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402780.1,GeneID:7144650;gbkey=CDS;product=Qin prophage;protein_id=YP_002402780.1;transl_table=11
NC_011748.1	RefSeq	gene	1782114	1782578	.	-	.	ID=gene1743;Name=rzpD;Dbxref=GeneID:7148438;gbkey=Gene;gene=rzpD;locus_tag=EC55989_1713
NC_011748.1	RefSeq	CDS	1782114	1782578	.	-	0	ID=cds1636;Name=YP_002402781.1;Parent=gene1743;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 2019562%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002402781.1,GeneID:7148438;gbkey=CDS;product=murein endopeptidase%3B DLP12 prophage;protein_id=YP_002402781.1;transl_table=11
NC_011748.1	RefSeq	STS	1782274	1782291	.	+	.	ID=id125;Dbxref=UniSTS:98954;gbkey=STS
NC_011748.1	RefSeq	gene	1782580	1782753	.	-	.	ID=gene1744;Name=EC55989_1714;Dbxref=GeneID:7147598;gbkey=Gene;locus_tag=EC55989_1714
NC_011748.1	RefSeq	CDS	1782580	1782753	.	-	0	ID=cds1637;Name=YP_002402782.1;Parent=gene1744;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402782.1,GeneID:7147598;gbkey=CDS;product=phage protein;protein_id=YP_002402782.1;transl_table=11
NC_011748.1	RefSeq	gene	1782877	1783410	.	-	.	ID=gene1745;Name=ydfQ;Dbxref=GeneID:7144651;gbkey=Gene;gene=ydfQ;locus_tag=EC55989_1715
NC_011748.1	RefSeq	CDS	1782877	1783410	.	-	0	ID=cds1638;Name=YP_002402783.1;Parent=gene1745;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002402783.1,GeneID:7144651;gbkey=CDS;product=membrane-associated lysozyme%3B Qin prophage;protein_id=YP_002402783.1;transl_table=11
NC_011748.1	RefSeq	gene	1783466	1783780	.	-	.	ID=gene1746;Name=EC55989_1716;Dbxref=GeneID:7148441;gbkey=Gene;locus_tag=EC55989_1716;pseudo=true
NC_011748.1	RefSeq	region	1783466	1783780	.	-	.	ID=id126;Note=fragment of conserved hypothetical protein %28partial%29%3BEvidence 7 : Gene remnant%3B Product type h : extrachromosomal origin;Dbxref=GeneID:7148441;gbkey=misc_feature
NC_011748.1	RefSeq	gene	1783785	1784000	.	-	.	ID=gene1747;Name=essD;Dbxref=GeneID:7144652;gbkey=Gene;gene=essD;locus_tag=EC55989_1717
NC_011748.1	RefSeq	CDS	1783785	1784000	.	-	0	ID=cds1639;Name=YP_002402784.1;Parent=gene1747;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 2019562%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002402784.1,GeneID:7144652;gbkey=CDS;product=phage lysis protein S%3B DLP12 prophage;protein_id=YP_002402784.1;transl_table=11
NC_011748.1	RefSeq	gene	1784252	1784647	.	-	.	ID=gene1748;Name=EC55989_1718;Dbxref=GeneID:7146024;gbkey=Gene;locus_tag=EC55989_1718
NC_011748.1	RefSeq	CDS	1784252	1784647	.	-	0	ID=cds1640;Name=YP_002402785.1;Parent=gene1748;Note=Evidence 7 : Gene remnant%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402785.1,GeneID:7146024;gbkey=CDS;product=tolA protein %28fragment%29 of prophage;protein_id=YP_002402785.1;transl_table=11
NC_011748.1	RefSeq	gene	1784798	1785226	.	-	.	ID=gene1749;Name=tolA;Dbxref=GeneID:7144653;gbkey=Gene;gene=tolA;locus_tag=EC55989_1719
NC_011748.1	RefSeq	CDS	1784798	1785226	.	-	0	ID=cds1641;Name=YP_002402786.1;Parent=gene1749;Note=Evidence 7 : Gene remnant%3B PubMedId : 2068069%2C 10404600%2C 8978668%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402786.1,GeneID:7144653;gbkey=CDS;product=TolA protein %28fragment%29 of prophage;protein_id=YP_002402786.1;transl_table=11
NC_011748.1	RefSeq	gene	1785593	1785679	.	-	.	ID=gene1750;Name=EC55989_1720;Dbxref=GeneID:7147812;gbkey=Gene;locus_tag=EC55989_1720;pseudo=true
NC_011748.1	RefSeq	region	1785593	1785679	.	-	.	ID=id127;Note=fragment of   protein %28partial%29%3BEvidence 7 : Gene remnant;Dbxref=GeneID:7147812;gbkey=misc_feature
NC_011748.1	RefSeq	gene	1785760	1786113	.	-	.	ID=gene1751;Name=EC55989_1721;Dbxref=GeneID:7144654;gbkey=Gene;locus_tag=EC55989_1721
NC_011748.1	RefSeq	CDS	1785760	1786113	.	-	0	ID=cds1642;Name=YP_002402787.1;Parent=gene1751;Note=Evidence 5 : No homology to any previously reported sequences%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402787.1,GeneID:7144654;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402787.1;transl_table=11
NC_011748.1	RefSeq	gene	1786224	1786300	.	-	.	ID=gene1752;Name=EC55989_tRNA82;Dbxref=GeneID:7144655;gbkey=Gene;locus_tag=EC55989_tRNA82
NC_011748.1	RefSeq	tRNA	1786224	1786300	.	-	.	ID=rna68;Dbxref=GeneID:7144655;gbkey=tRNA;product=tRNA-Arg
NC_011748.1	RefSeq	exon	1786224	1786300	.	-	.	ID=id128;Parent=rna68;Dbxref=GeneID:7144655;gbkey=tRNA;product=tRNA-Arg
NC_011748.1	RefSeq	gene	1786258	1786422	.	+	.	ID=gene1753;Name=EC55989_1722;Dbxref=GeneID:7145397;gbkey=Gene;locus_tag=EC55989_1722
NC_011748.1	RefSeq	CDS	1786258	1786422	.	+	0	ID=cds1643;Name=YP_002402788.1;Parent=gene1753;Note=Evidence 5 : No homology to any previously reported sequences%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402788.1,GeneID:7145397;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402788.1;transl_table=11
NC_011748.1	RefSeq	gene	1786401	1786476	.	-	.	ID=gene1754;Name=EC55989_tRNA81;Dbxref=GeneID:7144656;gbkey=Gene;locus_tag=EC55989_tRNA81
NC_011748.1	RefSeq	tRNA	1786401	1786476	.	-	.	ID=rna69;Dbxref=GeneID:7144656;gbkey=tRNA;product=tRNA-Met
NC_011748.1	RefSeq	exon	1786401	1786476	.	-	.	ID=id129;Parent=rna69;Dbxref=GeneID:7144656;gbkey=tRNA;product=tRNA-Met
NC_011748.1	RefSeq	gene	1786620	1787441	.	-	.	ID=gene1755;Name=EC55989_1723;Dbxref=GeneID:7145396;gbkey=Gene;locus_tag=EC55989_1723
NC_011748.1	RefSeq	CDS	1786620	1787441	.	-	0	ID=cds1644;Name=YP_002402789.1;Parent=gene1755;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402789.1,GeneID:7145396;gbkey=CDS;product=antitermination protein Q of prophage;protein_id=YP_002402789.1;transl_table=11
NC_011748.1	RefSeq	gene	1787438	1787815	.	-	.	ID=gene1756;Name=EC55989_1724;Dbxref=GeneID:7144657;gbkey=Gene;locus_tag=EC55989_1724
NC_011748.1	RefSeq	CDS	1787438	1787815	.	-	0	ID=cds1645;Name=YP_002402790.1;Parent=gene1756;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402790.1,GeneID:7144657;gbkey=CDS;product=crossover junction endodeoxyribonuclease rusA %28Holliday junction nuclease rusA%29 %28Holliday juction resolvase%29 %28Gp67%29;protein_id=YP_002402790.1;transl_table=11
NC_011748.1	RefSeq	gene	1787619	1787819	.	-	.	ID=gene1757;Name=EC55989_1725;Dbxref=GeneID:7144658;gbkey=Gene;locus_tag=EC55989_1725
NC_011748.1	RefSeq	CDS	1787619	1787819	.	-	0	ID=cds1646;Name=YP_002402791.1;Parent=gene1757;Note=Evidence 6 : Doubtful CDS;Dbxref=Genbank:YP_002402791.1,GeneID:7144658;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402791.1;transl_table=11
NC_011748.1	RefSeq	gene	1787825	1788874	.	-	.	ID=gene1758;Name=ydfU;Dbxref=GeneID:7144659;gbkey=Gene;gene=ydfU;locus_tag=EC55989_1726
NC_011748.1	RefSeq	CDS	1787825	1788874	.	-	0	ID=cds1647;Name=YP_002402792.1;Parent=gene1758;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402792.1,GeneID:7144659;gbkey=CDS;product=Qin prophage;protein_id=YP_002402792.1;transl_table=11
NC_011748.1	RefSeq	gene	1789221	1789472	.	-	.	ID=gene1759;Name=rem;Dbxref=GeneID:7148444;gbkey=Gene;gene=rem;locus_tag=EC55989_1727
NC_011748.1	RefSeq	CDS	1789221	1789472	.	-	0	ID=cds1648;Name=YP_002402793.1;Parent=gene1759;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 2990907%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402793.1,GeneID:7148444;gbkey=CDS;product=Qin prophage;protein_id=YP_002402793.1;transl_table=11
NC_011748.1	RefSeq	gene	1790060	1790383	.	-	.	ID=gene1760;Name=EC55989_1728;Dbxref=GeneID:7147372;gbkey=Gene;locus_tag=EC55989_1728
NC_011748.1	RefSeq	CDS	1790060	1790383	.	-	0	ID=cds1649;Name=YP_002402794.1;Parent=gene1760;Note=Evidence 5 : No homology to any previously reported sequences;Dbxref=Genbank:YP_002402794.1,GeneID:7147372;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402794.1;transl_table=11
NC_011748.1	RefSeq	gene	1790432	1791469	.	-	.	ID=gene1761;Name=EC55989_1729;Dbxref=GeneID:7144660;gbkey=Gene;locus_tag=EC55989_1729
NC_011748.1	RefSeq	CDS	1790432	1791469	.	-	0	ID=cds1650;Name=YP_002402795.1;Parent=gene1761;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402795.1,GeneID:7144660;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402795.1;transl_table=11
NC_011748.1	RefSeq	gene	1791685	1792110	.	-	.	ID=gene1762;Name=EC55989_1730;Dbxref=GeneID:7144661;gbkey=Gene;locus_tag=EC55989_1730
NC_011748.1	RefSeq	CDS	1791685	1792110	.	-	0	ID=cds1651;Name=YP_002402796.1;Parent=gene1762;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402796.1,GeneID:7144661;gbkey=CDS;product=phage protein;protein_id=YP_002402796.1;transl_table=11
NC_011748.1	RefSeq	gene	1792151	1793170	.	-	.	ID=gene1763;Name=EC55989_1731;Dbxref=GeneID:7144662;gbkey=Gene;locus_tag=EC55989_1731
NC_011748.1	RefSeq	CDS	1792151	1793170	.	-	0	ID=cds1652;Name=YP_002402797.1;Parent=gene1763;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402797.1,GeneID:7144662;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402797.1;transl_table=11
NC_011748.1	RefSeq	gene	1793097	1793618	.	-	.	ID=gene1764;Name=EC55989_1732;Dbxref=GeneID:7144663;gbkey=Gene;locus_tag=EC55989_1732
NC_011748.1	RefSeq	CDS	1793097	1793618	.	-	0	ID=cds1653;Name=YP_002402798.1;Parent=gene1764;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402798.1,GeneID:7144663;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402798.1;transl_table=11
NC_011748.1	RefSeq	gene	1793602	1793832	.	-	.	ID=gene1765;Name=dicC;Dbxref=GeneID:7144664;gbkey=Gene;gene=dicC;locus_tag=EC55989_1733
NC_011748.1	RefSeq	CDS	1793602	1793832	.	-	0	ID=cds1654;Name=YP_002402799.1;Parent=gene1765;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 88232418%2C 3532030%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402799.1,GeneID:7144664;gbkey=CDS;product=DNA-binding transcriptional regulator DicC;protein_id=YP_002402799.1;transl_table=11
NC_011748.1	RefSeq	gene	1793910	1794317	.	+	.	ID=gene1766;Name=dicA;Dbxref=GeneID:7145910;gbkey=Gene;gene=dicA;locus_tag=EC55989_1734
NC_011748.1	RefSeq	CDS	1793910	1794317	.	+	0	ID=cds1655;Name=YP_002402800.1;Parent=gene1766;Note=The transcriptional repressor of DicA %28divison cell%29 has a hypothetical DNA binding domain. It represses the transcription of dicB and dicC%2C but its specific role in cellular replication and mode of action are still unknown.;Dbxref=Genbank:YP_002402800.1,GeneID:7145910;gbkey=CDS;product=transcriptional repressor DicA;protein_id=YP_002402800.1;transl_table=11
NC_011748.1	RefSeq	gene	1794486	1794641	.	+	.	ID=gene1767;Name=ydfA;Dbxref=GeneID:7145908;gbkey=Gene;gene=ydfA;locus_tag=EC55989_1735
NC_011748.1	RefSeq	CDS	1794486	1794641	.	+	0	ID=cds1656;Name=YP_002402801.1;Parent=gene1767;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402801.1,GeneID:7145908;gbkey=CDS;product=Qin prophage;protein_id=YP_002402801.1;transl_table=11
NC_011748.1	RefSeq	gene	1794601	1795218	.	+	.	ID=gene1768;Name=EC55989_1736;Dbxref=GeneID:7148429;gbkey=Gene;locus_tag=EC55989_1736
NC_011748.1	RefSeq	CDS	1794601	1795218	.	+	0	ID=cds1657;Name=YP_002402802.1;Parent=gene1768;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402802.1,GeneID:7148429;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402802.1;transl_table=11
NC_011748.1	RefSeq	gene	1795478	1795530	.	+	.	ID=gene1769;Name=dicF;Dbxref=GeneID:7144665;gbkey=Gene;gene=dicF;locus_tag=EC55989_misc_RNA_35
NC_011748.1	RefSeq	transcript	1795478	1795530	.	+	.	ID=rna70;Parent=gene1769;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 7651342%3B Product type n : RNA;Dbxref=GeneID:7144665;gbkey=misc_RNA;product=DicF
NC_011748.1	RefSeq	exon	1795478	1795530	.	+	.	ID=id130;Parent=rna70;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 7651342%3B Product type n : RNA;Dbxref=GeneID:7144665;gbkey=misc_RNA;product=DicF
NC_011748.1	RefSeq	gene	1795600	1795893	.	+	.	ID=gene1770;Name=EC55989_1737;Dbxref=GeneID:7145913;gbkey=Gene;locus_tag=EC55989_1737
NC_011748.1	RefSeq	CDS	1795600	1795893	.	+	0	ID=cds1658;Name=YP_002402803.1;Parent=gene1770;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402803.1,GeneID:7145913;gbkey=CDS;product=regulator of cell division encoded by prophage;protein_id=YP_002402803.1;transl_table=11
NC_011748.1	RefSeq	gene	1795890	1796081	.	+	.	ID=gene1771;Name=ydfD;Dbxref=GeneID:7144666;gbkey=Gene;gene=ydfD;locus_tag=EC55989_1738
NC_011748.1	RefSeq	CDS	1795890	1796081	.	+	0	ID=cds1659;Name=YP_002402804.1;Parent=gene1771;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402804.1,GeneID:7144666;gbkey=CDS;product=Qin prophage;protein_id=YP_002402804.1;transl_table=11
NC_011748.1	RefSeq	gene	1796175	1798646	.	+	.	ID=gene1772;Name=EC55989_1739;Dbxref=GeneID:7148433;gbkey=Gene;locus_tag=EC55989_1739
NC_011748.1	RefSeq	CDS	1796175	1798646	.	+	0	ID=cds1660;Name=YP_002402805.1;Parent=gene1772;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402805.1,GeneID:7148433;gbkey=CDS;product=exonuclease from phage origin;protein_id=YP_002402805.1;transl_table=11
NC_011748.1	RefSeq	gene	1798719	1798970	.	+	.	ID=gene1773;Name=xis;Dbxref=GeneID:7144667;gbkey=Gene;gene=xis;locus_tag=EC55989_1740
NC_011748.1	RefSeq	CDS	1798719	1798970	.	+	0	ID=cds1661;Name=YP_002402806.1;Parent=gene1773;Note=Evidence 2b : Function of strongly homologous gene%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002402806.1,GeneID:7144667;gbkey=CDS;product=prophage excisionase;protein_id=YP_002402806.1;transl_table=11
NC_011748.1	RefSeq	gene	1798990	1800285	.	+	.	ID=gene1774;Name=intQ;Dbxref=GeneID:7147991;gbkey=Gene;gene=intQ;locus_tag=EC55989_1741
NC_011748.1	RefSeq	CDS	1798990	1800285	.	+	0	ID=cds1662;Name=YP_002402807.1;Parent=gene1774;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002402807.1,GeneID:7147991;gbkey=CDS;product=defective integrase%3B Qin prophage;protein_id=YP_002402807.1;transl_table=11
NC_011748.1	RefSeq	gene	1800305	1800415	.	-	.	ID=gene1775;Name=ynfP;Dbxref=GeneID:7146609;gbkey=Gene;gene=ynfP;locus_tag=EC55989_1742
NC_011748.1	RefSeq	CDS	1800305	1800415	.	-	0	ID=cds1663;Name=YP_002402808.1;Parent=gene1775;Note=Evidence 6 : Doubtful CDS;Dbxref=Genbank:YP_002402808.1,GeneID:7146609;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402808.1;transl_table=11
NC_011748.1	RefSeq	gene	1800473	1801162	.	-	.	ID=gene1776;Name=rspB;Dbxref=GeneID:7149322;gbkey=Gene;gene=rspB;locus_tag=EC55989_1743;pseudo=true
NC_011748.1	RefSeq	region	1800473	1801162	.	-	.	ID=id131;Note=fragment of  oxidoreductase%2C Zn-dependent and NAD%28P%29-binding %28part 2%29%3BEvidence 7 : Gene remnant%3B Product type pe :  enzyme;Dbxref=GeneID:7149322;gbkey=misc_feature
NC_011748.1	RefSeq	gene	1801258	1801326	.	-	.	ID=gene1777;Name=RNAout;Dbxref=GeneID:7147539;gbkey=Gene;gene=RNAout;locus_tag=EC55989_misc_RNA_36
NC_011748.1	RefSeq	transcript	1801258	1801326	.	-	.	ID=rna71;Parent=gene1777;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 1691096%3B Product type n : RNA;Dbxref=GeneID:7147539;gbkey=misc_RNA;product=RNA-OUT
NC_011748.1	RefSeq	exon	1801258	1801326	.	-	.	ID=id132;Parent=rna71;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 1691096%3B Product type n : RNA;Dbxref=GeneID:7147539;gbkey=misc_RNA;product=RNA-OUT
NC_011748.1	RefSeq	gene	1801318	1802526	.	+	.	ID=gene1778;Name=EC55989_1744;Dbxref=GeneID:7147441;gbkey=Gene;locus_tag=EC55989_1744
NC_011748.1	RefSeq	CDS	1801318	1802526	.	+	0	ID=cds1664;Name=YP_002402809.1;Parent=gene1778;Note=Evidence 2b : Function of strongly homologous gene%3B PubMedId : 10781570%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002402809.1,GeneID:7147441;gbkey=CDS;product=transposase%2C IS4 family%2C IS10L;protein_id=YP_002402809.1;transl_table=11
NC_011748.1	RefSeq	gene	1802495	1802854	.	-	.	ID=gene1779;Name=rspB;Dbxref=GeneID:7144668;gbkey=Gene;gene=rspB;locus_tag=EC55989_1745;pseudo=true
NC_011748.1	RefSeq	region	1802495	1802854	.	-	.	ID=id133;Note=fragment of  oxidoreductase%2C Zn-dependent and NAD%28P%29-binding %28part 1%29%3BEvidence 7 : Gene remnant%3B Product type pe :  enzyme;Dbxref=GeneID:7144668;gbkey=misc_feature
NC_011748.1	RefSeq	gene	1802842	1804056	.	-	.	ID=gene1780;Name=rspA;Dbxref=GeneID:7147540;gbkey=Gene;gene=rspA;locus_tag=EC55989_1746
NC_011748.1	RefSeq	CDS	1802842	1804056	.	-	0	ID=cds1665;Name=YP_002402810.1;Parent=gene1780;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 93341455%2C 94310441%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002402810.1,GeneID:7147540;gbkey=CDS;product=enolase%2Fdehydratase;protein_id=YP_002402810.1;transl_table=11
NC_011748.1	RefSeq	gene	1804262	1804588	.	-	.	ID=gene1781;Name=ynfA;Dbxref=GeneID:7147537;gbkey=Gene;gene=ynfA;locus_tag=EC55989_1747
NC_011748.1	RefSeq	CDS	1804262	1804588	.	-	0	ID=cds1666;Name=YP_002402811.1;Parent=gene1781;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002402811.1,GeneID:7147537;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402811.1;transl_table=11
NC_011748.1	RefSeq	gene	1804723	1805064	.	+	.	ID=gene1782;Name=ynfB;Dbxref=GeneID:7149310;gbkey=Gene;gene=ynfB;locus_tag=EC55989_1748
NC_011748.1	RefSeq	CDS	1804723	1805064	.	+	0	ID=cds1667;Name=YP_002402812.1;Parent=gene1782;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402812.1,GeneID:7149310;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402812.1;transl_table=11
NC_011748.1	RefSeq	gene	1805099	1805659	.	+	.	ID=gene1783;Name=speG;Dbxref=GeneID:7149311;gbkey=Gene;gene=speG;locus_tag=EC55989_1749
NC_011748.1	RefSeq	CDS	1805099	1805659	.	+	0	ID=cds1668;Name=YP_002402813.1;Parent=gene1783;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 94357898%3B Product type e : enzyme;Dbxref=Genbank:YP_002402813.1,GeneID:7149311;gbkey=CDS;product=spermidine N1-acetyltransferase;protein_id=YP_002402813.1;transl_table=11
NC_011748.1	RefSeq	gene	1805662	1806372	.	-	.	ID=gene1784;Name=ynfC;Dbxref=GeneID:7147691;gbkey=Gene;gene=ynfC;locus_tag=EC55989_1750
NC_011748.1	RefSeq	CDS	1805662	1806372	.	-	0	ID=cds1669;Name=YP_002402814.1;Parent=gene1784;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402814.1,GeneID:7147691;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402814.1;transl_table=11
NC_011748.1	RefSeq	gene	1806480	1806785	.	+	.	ID=gene1785;Name=ynfD;Dbxref=GeneID:7149312;gbkey=Gene;gene=ynfD;locus_tag=EC55989_1751
NC_011748.1	RefSeq	CDS	1806480	1806785	.	+	0	ID=cds1670;Name=YP_002402815.1;Parent=gene1785;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 9868784;Dbxref=Genbank:YP_002402815.1,GeneID:7149312;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402815.1;transl_table=11
NC_011748.1	RefSeq	gene	1806984	1809410	.	+	.	ID=gene1786;Name=ynfE;Dbxref=GeneID:7149313;gbkey=Gene;gene=ynfE;locus_tag=EC55989_1752
NC_011748.1	RefSeq	CDS	1806984	1809410	.	+	0	ID=cds1671;Name=YP_002402816.1;Parent=gene1786;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 14522592%3B Product type e : enzyme;Dbxref=Genbank:YP_002402816.1,GeneID:7149313;gbkey=CDS;product=oxidoreductase subunit;protein_id=YP_002402816.1;transl_table=11
NC_011748.1	RefSeq	gene	1809471	1811894	.	+	.	ID=gene1787;Name=ynfF;Dbxref=GeneID:7149314;gbkey=Gene;gene=ynfF;locus_tag=EC55989_1753
NC_011748.1	RefSeq	CDS	1809471	1811894	.	+	0	ID=cds1672;Name=YP_002402817.1;Parent=gene1787;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 14522592%3B Product type e : enzyme;Dbxref=Genbank:YP_002402817.1,GeneID:7149314;gbkey=CDS;product=oxidoreductase subunit;protein_id=YP_002402817.1;transl_table=11
NC_011748.1	RefSeq	gene	1811905	1812522	.	+	.	ID=gene1788;Name=ynfG;Dbxref=GeneID:7149315;gbkey=Gene;gene=ynfG;locus_tag=EC55989_1754
NC_011748.1	RefSeq	CDS	1811905	1812522	.	+	0	ID=cds1673;Name=YP_002402818.1;Parent=gene1788;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 14522592%3B Product type c : carrier;Dbxref=Genbank:YP_002402818.1,GeneID:7149315;gbkey=CDS;product=oxidoreductase%2C Fe-S subunit;protein_id=YP_002402818.1;transl_table=11
NC_011748.1	RefSeq	gene	1812524	1813378	.	+	.	ID=gene1789;Name=ynfH;Dbxref=GeneID:7149316;gbkey=Gene;gene=ynfH;locus_tag=EC55989_1755
NC_011748.1	RefSeq	CDS	1812524	1813378	.	+	0	ID=cds1674;Name=YP_002402819.1;Parent=gene1789;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 14522592%3B Product type m : membrane component;Dbxref=Genbank:YP_002402819.1,GeneID:7149316;gbkey=CDS;product=oxidoreductase%2C membrane subunit;protein_id=YP_002402819.1;transl_table=11
NC_011748.1	RefSeq	gene	1813421	1814035	.	+	.	ID=gene1790;Name=dmsD;Dbxref=GeneID:7149317;gbkey=Gene;gene=dmsD;locus_tag=EC55989_1756
NC_011748.1	RefSeq	CDS	1813421	1814035	.	+	0	ID=cds1675;Name=YP_002402820.1;Parent=gene1790;Note=binds to the twin-arginine signal peptides of certain proteins%2C including dimethylsulfoxide reductase and trimethylamine N-oxide reductase that are translocated to the cytoplasmic membrane;Dbxref=Genbank:YP_002402820.1,GeneID:7149317;gbkey=CDS;product=twin-argninine leader-binding protein DmsD;protein_id=YP_002402820.1;transl_table=11
NC_011748.1	RefSeq	gene	1814230	1815486	.	+	.	ID=gene1791;Name=clcB;Dbxref=GeneID:7145931;gbkey=Gene;gene=clcB;locus_tag=EC55989_1757
NC_011748.1	RefSeq	CDS	1814230	1815486	.	+	0	ID=cds1676;Name=YP_002402821.1;Parent=gene1791;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 12384697%3B Product type pt :  transporter;Dbxref=Genbank:YP_002402821.1,GeneID:7145931;gbkey=CDS;product=voltage-gated ClC-type chloride channel ClcB;protein_id=YP_002402821.1;transl_table=11
NC_011748.1	RefSeq	gene	1815439	1816134	.	-	.	ID=gene1792;Name=ynfK;Dbxref=GeneID:7145719;gbkey=Gene;gene=ynfK;locus_tag=EC55989_1758
NC_011748.1	RefSeq	CDS	1815439	1816134	.	-	0	ID=cds1677;Name=YP_002402822.1;Parent=gene1792;Note=DTB synthetase%3B dethiobiotin synthase%3B involved in production of dethiobiotin from ATP and 7%2C8-diaminononanoate and carbon dioxide%3B contains magnesium;Dbxref=Genbank:YP_002402822.1,GeneID:7145719;gbkey=CDS;product=dithiobiotin synthetase;protein_id=YP_002402822.1;transl_table=11
NC_011748.1	RefSeq	gene	1816259	1817479	.	-	.	ID=gene1793;Name=dgsA;Dbxref=GeneID:7149318;gbkey=Gene;gene=dgsA;locus_tag=EC55989_1759
NC_011748.1	RefSeq	CDS	1816259	1817479	.	-	0	ID=cds1678;Name=YP_002402823.1;Parent=gene1793;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 10318813%2C 20490366%2C 6989798%2C 99340206%2C 99395104%2C 99398866%2C 7766024%3B Product type r : regulator;Dbxref=Genbank:YP_002402823.1,GeneID:7149318;gbkey=CDS;product=DNA-binding transcriptional repressor;protein_id=YP_002402823.1;transl_table=11
NC_011748.1	RefSeq	gene	1817614	1818507	.	-	.	ID=gene1794;Name=ynfL;Dbxref=GeneID:7145900;gbkey=Gene;gene=ynfL;locus_tag=EC55989_1760
NC_011748.1	RefSeq	CDS	1817614	1818507	.	-	0	ID=cds1679;Name=YP_002402824.1;Parent=gene1794;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pr :  regulator;Dbxref=Genbank:YP_002402824.1,GeneID:7145900;gbkey=CDS;product=DNA-binding transcriptional regulator;protein_id=YP_002402824.1;transl_table=11
NC_011748.1	RefSeq	gene	1818614	1819867	.	+	.	ID=gene1795;Name=ynfM;Dbxref=GeneID:7149319;gbkey=Gene;gene=ynfM;locus_tag=EC55989_1761
NC_011748.1	RefSeq	CDS	1818614	1819867	.	+	0	ID=cds1680;Name=YP_002402825.1;Parent=gene1795;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002402825.1,GeneID:7149319;gbkey=CDS;product=transporter%3B MFS type;protein_id=YP_002402825.1;transl_table=11
NC_011748.1	RefSeq	gene	1820291	1820599	.	+	.	ID=gene1796;Name=asr;Dbxref=GeneID:7149320;gbkey=Gene;gene=asr;locus_tag=EC55989_1762
NC_011748.1	RefSeq	CDS	1820291	1820599	.	+	0	ID=cds1681;Name=YP_002402826.1;Parent=gene1796;Note=required for growth and survival under moderately acid conditions;Dbxref=Genbank:YP_002402826.1,GeneID:7149320;gbkey=CDS;product=acid shock protein;protein_id=YP_002402826.1;transl_table=11
NC_011748.1	RefSeq	gene	1820875	1821696	.	+	.	ID=gene1797;Name=ydgD;Dbxref=GeneID:7145574;gbkey=Gene;gene=ydgD;locus_tag=EC55989_1763
NC_011748.1	RefSeq	CDS	1820875	1821696	.	+	0	ID=cds1682;Name=YP_002402827.1;Parent=gene1797;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002402827.1,GeneID:7145574;gbkey=CDS;product=metallopeptidase;protein_id=YP_002402827.1;transl_table=11
NC_011748.1	RefSeq	gene	1821735	1822064	.	-	.	ID=gene1798;Name=mdtI;Dbxref=GeneID:7148448;gbkey=Gene;gene=mdtI;locus_tag=EC55989_1764
NC_011748.1	RefSeq	CDS	1821735	1822064	.	-	0	ID=cds1683;Name=YP_002402828.1;Parent=gene1798;Note=with MdtJ is involved in resistance to deoxycholate%2C nalidixic acid%2C fosfomycin%2C and SDS;Dbxref=Genbank:YP_002402828.1,GeneID:7148448;gbkey=CDS;product=multidrug efflux system protein MdtI;protein_id=YP_002402828.1;transl_table=11
NC_011748.1	RefSeq	gene	1822051	1822416	.	-	.	ID=gene1799;Name=mdtJ;Dbxref=GeneID:7146810;gbkey=Gene;gene=mdtJ;locus_tag=EC55989_1765
NC_011748.1	RefSeq	CDS	1822051	1822416	.	-	0	ID=cds1684;Name=YP_002402829.1;Parent=gene1799;Note=with MdtI is involved in resistance to deoxycholate %2C nalidixic acid%2C fosfomycin%2C and SDS;Dbxref=Genbank:YP_002402829.1,GeneID:7146810;gbkey=CDS;product=multidrug efflux system protein MdtJ;protein_id=YP_002402829.1;transl_table=11
NC_011748.1	RefSeq	gene	1822828	1823862	.	+	.	ID=gene1800;Name=tqsA;Dbxref=GeneID:7146811;gbkey=Gene;gene=tqsA;locus_tag=EC55989_1766
NC_011748.1	RefSeq	CDS	1822828	1823862	.	+	0	ID=cds1685;Name=YP_002402830.1;Parent=gene1800;Note=transport of quorum-sensing signal%3B mutations in this gene alters the transport of the quorum-sensing signal autoinducer 2 %28AI-2%29 which affects expression of a large number of genes;Dbxref=Genbank:YP_002402830.1,GeneID:7146811;gbkey=CDS;product=transporter;protein_id=YP_002402830.1;transl_table=11
NC_011748.1	RefSeq	gene	1823887	1825275	.	-	.	ID=gene1801;Name=pntB;Dbxref=GeneID:7148449;gbkey=Gene;gene=pntB;locus_tag=EC55989_1767
NC_011748.1	RefSeq	CDS	1823887	1825275	.	-	0	ID=cds1686;Name=YP_002402831.1;Parent=gene1801;Note=catalyzes reversible transfer of hydride ion equivalent between NAD and NADP%3B membrane-bound proton pump that translocates protons from cytosolic to periplasmic side of the inner membrane%3B forms a tetramer composed of two alpha and 2 beta subunits%3B AB-stereospecific enzyme;Dbxref=Genbank:YP_002402831.1,GeneID:7148449;gbkey=CDS;product=pyridine nucleotide transhydrogenase;protein_id=YP_002402831.1;transl_table=11
NC_011748.1	RefSeq	gene	1825286	1826818	.	-	.	ID=gene1802;Name=pntA;Dbxref=GeneID:7147205;gbkey=Gene;gene=pntA;locus_tag=EC55989_1768
NC_011748.1	RefSeq	CDS	1825286	1826818	.	-	0	ID=cds1687;Name=YP_002402832.1;Parent=gene1802;Note=forms a tetramer composed of 2 alpha subunits and 2 beta subunits in the inner membrane%3B involved in catalyzing transfer of hydride ion equivalents between NAD and NADP%3B stereospecific %28AB-specific%29%3B functions as a proton pump by translocating protons from cytoplasm to periplasm;Dbxref=Genbank:YP_002402832.1,GeneID:7147205;gbkey=CDS;product=NAD%28P%29 transhydrogenase subunit alpha;protein_id=YP_002402832.1;transl_table=11
NC_011748.1	RefSeq	gene	1827342	1828286	.	+	.	ID=gene1803;Name=ydgH;Dbxref=GeneID:7147204;gbkey=Gene;gene=ydgH;locus_tag=EC55989_1769
NC_011748.1	RefSeq	CDS	1827342	1828286	.	+	0	ID=cds1688;Name=YP_002402833.1;Parent=gene1803;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402833.1,GeneID:7147204;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402833.1;transl_table=11
NC_011748.1	RefSeq	gene	1828472	1829854	.	+	.	ID=gene1804;Name=ydgI;Dbxref=GeneID:7148450;gbkey=Gene;gene=ydgI;locus_tag=EC55989_1770
NC_011748.1	RefSeq	CDS	1828472	1829854	.	+	0	ID=cds1689;Name=YP_002402834.1;Parent=gene1804;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 1311296%3B Product type pt :  transporter;Dbxref=Genbank:YP_002402834.1,GeneID:7148450;gbkey=CDS;product=arginine%2Fornithine antiporter transporter;protein_id=YP_002402834.1;transl_table=11
NC_011748.1	RefSeq	gene	1829891	1830613	.	+	.	ID=gene1805;Name=folM;Dbxref=GeneID:7148451;gbkey=Gene;gene=folM;locus_tag=EC55989_1771
NC_011748.1	RefSeq	CDS	1829891	1830613	.	+	0	ID=cds1690;Name=YP_002402835.1;Parent=gene1805;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 14617668%3B Product type e : enzyme;Dbxref=Genbank:YP_002402835.1,GeneID:7148451;gbkey=CDS;product=short chain dehydrogenase;protein_id=YP_002402835.1;transl_table=11
NC_011748.1	RefSeq	gene	1830610	1830945	.	-	.	ID=gene1806;Name=ydgC;Dbxref=GeneID:7146174;gbkey=Gene;gene=ydgC;locus_tag=EC55989_1773
NC_011748.1	RefSeq	CDS	1830610	1830945	.	-	0	ID=cds1691;Name=YP_002402836.1;Parent=gene1806;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002402836.1,GeneID:7146174;gbkey=CDS;product=inner membrane protein associated with alginate biosynthesis;protein_id=YP_002402836.1;transl_table=11
NC_011748.1	RefSeq	gene	1831065	1831793	.	+	.	ID=gene1807;Name=rstA;Dbxref=GeneID:7148447;gbkey=Gene;gene=rstA;locus_tag=EC55989_1774
NC_011748.1	RefSeq	CDS	1831065	1831793	.	+	0	ID=cds1692;Name=YP_002402837.1;Parent=gene1807;Note=response regulator in two-component regulatory system with RstB;Dbxref=Genbank:YP_002402837.1,GeneID:7148447;gbkey=CDS;product=DNA-binding transcriptional regulator RstA;protein_id=YP_002402837.1;transl_table=11
NC_011748.1	RefSeq	gene	1831797	1833098	.	+	.	ID=gene1808;Name=rstB;Dbxref=GeneID:7147543;gbkey=Gene;gene=rstB;locus_tag=EC55989_1775
NC_011748.1	RefSeq	CDS	1831797	1833098	.	+	0	ID=cds1693;Name=YP_002402838.1;Parent=gene1808;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 93086426%2C 1495392%2C 1925016%2C 2646639%3B Product type r : regulator;Dbxref=Genbank:YP_002402838.1,GeneID:7147543;gbkey=CDS;product=sensor protein RstB;protein_id=YP_002402838.1;transl_table=11
NC_011748.1	RefSeq	gene	1833174	1834103	.	+	.	ID=gene1809;Name=tus;Dbxref=GeneID:7147544;gbkey=Gene;gene=tus;locus_tag=EC55989_1776
NC_011748.1	RefSeq	CDS	1833174	1834103	.	+	0	ID=cds1694;Name=YP_002402839.1;Parent=gene1809;Note=binds to DNA replication terminator sequences to prevent passage of replication forks;Dbxref=Genbank:YP_002402839.1,GeneID:7147544;gbkey=CDS;product=DNA replication terminus site-binding protein;protein_id=YP_002402839.1;transl_table=11
NC_011748.1	RefSeq	gene	1834100	1835503	.	-	.	ID=gene1810;Name=fumC;Dbxref=GeneID:7147874;gbkey=Gene;gene=fumC;locus_tag=EC55989_1777
NC_011748.1	RefSeq	CDS	1834100	1835503	.	-	0	ID=cds1695;Name=YP_002402840.1;Parent=gene1810;Note=class II family %28does not require metal%29%3B tetrameric enzyme%3B fumarase C%3B reversibly converts %28S%29-malate to fumarate and water%3B functions in the TCA cycle;Dbxref=Genbank:YP_002402840.1,GeneID:7147874;gbkey=CDS;product=fumarate hydratase;protein_id=YP_002402840.1;transl_table=11
NC_011748.1	RefSeq	gene	1835646	1837292	.	-	.	ID=gene1811;Name=fumA;Dbxref=GeneID:7146232;gbkey=Gene;gene=fumA;locus_tag=EC55989_1778
NC_011748.1	RefSeq	CDS	1835646	1837292	.	-	0	ID=cds1696;Name=YP_002402841.1;Parent=gene1811;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 88193096%2C 88268900%2C 92011457%2C 3005475%2C 6328431%2C 9298646%3B Product type e : enzyme;Dbxref=Genbank:YP_002402841.1,GeneID:7146232;gbkey=CDS;product=fumarate hydratase %28fumarase A%29%2C aerobic Class I;protein_id=YP_002402841.1;transl_table=11
NC_011748.1	RefSeq	gene	1837491	1838666	.	+	.	ID=gene1812;Name=manA;Dbxref=GeneID:7146230;gbkey=Gene;gene=manA;locus_tag=EC55989_1779
NC_011748.1	RefSeq	CDS	1837491	1838666	.	+	0	ID=cds1697;Name=YP_002402842.1;Parent=gene1812;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 82100097%2C 6397402%3B Product type e : enzyme;Dbxref=Genbank:YP_002402842.1,GeneID:7146230;gbkey=CDS;product=mannose-6-phosphate isomerase;protein_id=YP_002402842.1;transl_table=11
NC_011748.1	RefSeq	gene	1838767	1840275	.	+	.	ID=gene1813;Name=ydgA;Dbxref=GeneID:7146781;gbkey=Gene;gene=ydgA;locus_tag=EC55989_1780
NC_011748.1	RefSeq	CDS	1838767	1840275	.	+	0	ID=cds1698;Name=YP_002402843.1;Parent=gene1813;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402843.1,GeneID:7146781;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402843.1;transl_table=11
NC_011748.1	RefSeq	gene	1840320	1841585	.	-	.	ID=gene1814;Name=uidC;Dbxref=GeneID:7148446;gbkey=Gene;gene=uidC;locus_tag=EC55989_1781
NC_011748.1	RefSeq	CDS	1840320	1841585	.	-	0	ID=cds1699;Name=YP_002402844.1;Parent=gene1814;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 15774881%3B Product type t : transporter;Dbxref=Genbank:YP_002402844.1,GeneID:7148446;gbkey=CDS;product=outer membrane porin protein;protein_id=YP_002402844.1;transl_table=11
NC_011748.1	RefSeq	gene	1841624	1842997	.	-	.	ID=gene1815;Name=uidB;Dbxref=GeneID:7147911;gbkey=Gene;gene=uidB;locus_tag=EC55989_1782
NC_011748.1	RefSeq	CDS	1841624	1842997	.	-	0	ID=cds1700;Name=YP_002402845.1;Parent=gene1815;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 3534890%3B Product type t : transporter;Dbxref=Genbank:YP_002402845.1,GeneID:7147911;gbkey=CDS;product=glucuronide transporter;protein_id=YP_002402845.1;transl_table=11
NC_011748.1	RefSeq	gene	1842994	1844805	.	-	.	ID=gene1816;Name=uidA;Dbxref=GeneID:7147910;gbkey=Gene;gene=uidA;locus_tag=EC55989_1783
NC_011748.1	RefSeq	CDS	1842994	1844805	.	-	0	ID=cds1701;Name=YP_002402846.1;Parent=gene1816;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 87041472%2C 88038341%2C 2103475%2C 8125312%3B Product type e : enzyme;Dbxref=Genbank:YP_002402846.1,GeneID:7147910;gbkey=CDS;product=beta-D-glucuronidase;protein_id=YP_002402846.1;transl_table=11
NC_011748.1	RefSeq	gene	1845194	1845784	.	-	.	ID=gene1817;Name=uidR;Dbxref=GeneID:7147909;gbkey=Gene;gene=uidR;locus_tag=EC55989_1784
NC_011748.1	RefSeq	CDS	1845194	1845784	.	-	0	ID=cds1702;Name=YP_002402847.1;Parent=gene1817;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 88038341%2C 2823062%2C 3934044%2C 11115104%3B Product type r : regulator;Dbxref=Genbank:YP_002402847.1,GeneID:7147909;gbkey=CDS;product=DNA-binding transcriptional repressor;protein_id=YP_002402847.1;transl_table=11
NC_011748.1	RefSeq	gene	1846013	1846780	.	-	.	ID=gene1818;Name=hdhA;Dbxref=GeneID:7147912;gbkey=Gene;gene=hdhA;locus_tag=EC55989_1786
NC_011748.1	RefSeq	CDS	1846013	1846780	.	-	0	ID=cds1703;Name=YP_002402848.1;Parent=gene1818;Note=Acts on the hydroxyl group at position 7 of the steroid frame;Dbxref=Genbank:YP_002402848.1,GeneID:7147912;gbkey=CDS;product=7-alpha-hydroxysteroid dehydrogenase;protein_id=YP_002402848.1;transl_table=11
NC_011748.1	RefSeq	gene	1846892	1847920	.	-	.	ID=gene1819;Name=malI;Dbxref=GeneID:7146405;gbkey=Gene;gene=malI;locus_tag=EC55989_1787
NC_011748.1	RefSeq	CDS	1846892	1847920	.	-	0	ID=cds1704;Name=YP_002402849.1;Parent=gene1819;Note=regulates malXY which are involved in maltose-glucose transport;Dbxref=Genbank:YP_002402849.1,GeneID:7146405;gbkey=CDS;product=DNA-binding transcriptional repressor MalI;protein_id=YP_002402849.1;transl_table=11
NC_011748.1	RefSeq	gene	1848095	1849687	.	+	.	ID=gene1820;Name=malX;Dbxref=GeneID:7146771;gbkey=Gene;gene=malX;locus_tag=EC55989_1788
NC_011748.1	RefSeq	CDS	1848095	1849687	.	+	0	ID=cds1705;Name=YP_002402850.1;Parent=gene1820;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system %28PTS%29%3B catalyzes the phosphorylation of maltose and glucose concomitant with their translocation across the cell membrane%3B component IIB catalyzes the phosphorylation of the sugar molecule%3B IIC forms the translocation channel and contains the substrate specific binding site;Dbxref=Genbank:YP_002402850.1,GeneID:7146771;gbkey=CDS;product=bifunctional PTS system maltose and glucose-specific transporter subunits IICB;protein_id=YP_002402850.1;transl_table=11
NC_011748.1	RefSeq	gene	1849697	1850869	.	+	.	ID=gene1821;Name=malY;Dbxref=GeneID:7146778;gbkey=Gene;gene=malY;locus_tag=EC55989_1789
NC_011748.1	RefSeq	CDS	1849697	1850869	.	+	0	ID=cds1706;Name=YP_002402851.1;Parent=gene1821;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 20164451%2C 7665481%2C 91310596%3B Product type e : enzyme;Dbxref=Genbank:YP_002402851.1,GeneID:7146778;gbkey=CDS;product=bifunctional beta-cystathionase and regulator of maltose regulon;protein_id=YP_002402851.1;transl_table=11
NC_011748.1	RefSeq	gene	1850973	1851974	.	+	.	ID=gene1822;Name=add;Dbxref=GeneID:7146779;gbkey=Gene;gene=add;locus_tag=EC55989_1790
NC_011748.1	RefSeq	CDS	1850973	1851974	.	+	0	ID=cds1707;Name=YP_002402852.1;Parent=gene1822;Note=catalyzes the formation of inosine from adenosine;Dbxref=Genbank:YP_002402852.1,GeneID:7146779;gbkey=CDS;product=adenosine deaminase;protein_id=YP_002402852.1;transl_table=11
NC_011748.1	RefSeq	gene	1852009	1853049	.	-	.	ID=gene1823;Name=ydgJ;Dbxref=GeneID:7145453;gbkey=Gene;gene=ydgJ;locus_tag=EC55989_1791
NC_011748.1	RefSeq	CDS	1852009	1853049	.	-	0	ID=cds1708;Name=YP_002402853.1;Parent=gene1823;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002402853.1,GeneID:7145453;gbkey=CDS;product=oxidoreductase;protein_id=YP_002402853.1;transl_table=11
NC_011748.1	RefSeq	gene	1853217	1853417	.	+	.	ID=gene1824;Name=blr;Dbxref=GeneID:7148452;gbkey=Gene;gene=blr;locus_tag=EC55989_1792
NC_011748.1	RefSeq	CDS	1853217	1853417	.	+	0	ID=cds1709;Name=YP_002402854.1;Parent=gene1824;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 20392465%2C 10931331%3B Product type m : membrane component;Dbxref=Genbank:YP_002402854.1,GeneID:7148452;gbkey=CDS;product=beta-lactam resistance membrane protein;protein_id=YP_002402854.1;transl_table=11
NC_011748.1	RefSeq	gene	1853690	1853905	.	+	.	ID=gene1825;Name=ydgT;Dbxref=GeneID:7145634;gbkey=Gene;gene=ydgT;locus_tag=EC55989_1793
NC_011748.1	RefSeq	CDS	1853690	1853905	.	+	0	ID=cds1710;Name=YP_002402855.1;Parent=gene1825;Note=YdgT%3B in E. coli%2C when complexed with H-NS or StpA binds a 26 base-pair DNA sequence of oriC%3B seems to play a role in optimizing the activity of oriC%3B non-essential%3B Hha protein paralog%3B in an hha mutant background%2C cnu is overexpressed and can compensate hha-induced phenotypes;Dbxref=Genbank:YP_002402855.1,GeneID:7145634;gbkey=CDS;product=oriC-binding nucleoid-associated protein;protein_id=YP_002402855.1;transl_table=11
NC_011748.1	RefSeq	gene	1853991	1854431	.	+	.	ID=gene1826;Name=ydgK;Dbxref=GeneID:7148455;gbkey=Gene;gene=ydgK;locus_tag=EC55989_1794
NC_011748.1	RefSeq	CDS	1853991	1854431	.	+	0	ID=cds1711;Name=YP_002402856.1;Parent=gene1826;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002402856.1,GeneID:7148455;gbkey=CDS;product=inner membrane protein;protein_id=YP_002402856.1;transl_table=11
NC_011748.1	RefSeq	gene	1854508	1855089	.	+	.	ID=gene1827;Name=rsxA;Dbxref=GeneID:7148453;gbkey=Gene;gene=rsxA;locus_tag=EC55989_1795
NC_011748.1	RefSeq	CDS	1854508	1855089	.	+	0	ID=cds1712;Name=YP_002402857.1;Parent=gene1827;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 10411911%2C 10637328%2C 12773378%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002402857.1,GeneID:7148453;gbkey=CDS;product=Na%28%2B%29-translocating NADH-quinone reductase subunit E;protein_id=YP_002402857.1;transl_table=11
NC_011748.1	RefSeq	gene	1855089	1855667	.	+	.	ID=gene1828;Name=rsxB;Dbxref=GeneID:7147546;gbkey=Gene;gene=rsxB;locus_tag=EC55989_1796
NC_011748.1	RefSeq	CDS	1855089	1855667	.	+	0	ID=cds1713;Name=YP_002402858.1;Parent=gene1828;Note=part of membrane-bound complex thought to be involved in electron transport to nitrogen;Dbxref=Genbank:YP_002402858.1,GeneID:7147546;gbkey=CDS;product=electron transport complex protein RnfB;protein_id=YP_002402858.1;transl_table=11
NC_011748.1	RefSeq	gene	1855660	1857786	.	+	.	ID=gene1829;Name=rsxC;Dbxref=GeneID:7147547;gbkey=Gene;gene=rsxC;locus_tag=EC55989_1797
NC_011748.1	RefSeq	CDS	1855660	1857786	.	+	0	ID=cds1714;Name=YP_002402859.1;Parent=gene1829;Note=part of membrane-bound complex thought to be involved in electron transport to nitrogen;Dbxref=Genbank:YP_002402859.1,GeneID:7147547;gbkey=CDS;product=electron transport complex protein RnfC;protein_id=YP_002402859.1;transl_table=11
NC_011748.1	RefSeq	gene	1857787	1858845	.	+	.	ID=gene1830;Name=rnfD;Dbxref=GeneID:7147548;gbkey=Gene;gene=rnfD;locus_tag=EC55989_1798
NC_011748.1	RefSeq	CDS	1857787	1858845	.	+	0	ID=cds1715;Name=YP_002402860.1;Parent=gene1830;Note=RnfD%3B RsxD%3B required for nitrogen fixation in Rhodobacter capsulatus%3B part of a membrane-bound complex thought to be involved in electron transport to nitrogenase%3B in Escherichia coli this gene is part of a cluster controlling SoxR-mediated induction of the SoxS transcription factor in the absence of oxidizing agents;Dbxref=Genbank:YP_002402860.1,GeneID:7147548;gbkey=CDS;product=electron transport complex protein RnfD;protein_id=YP_002402860.1;transl_table=11
NC_011748.1	RefSeq	gene	1858849	1859469	.	+	.	ID=gene1831;Name=rsxG;Dbxref=GeneID:7147549;gbkey=Gene;gene=rsxG;locus_tag=EC55989_1799
NC_011748.1	RefSeq	CDS	1858849	1859469	.	+	0	ID=cds1716;Name=YP_002402861.1;Parent=gene1831;Note=part of membrane-bound complex hought to be involved in electron transport to nitrogen;Dbxref=Genbank:YP_002402861.1,GeneID:7147549;gbkey=CDS;product=electron transport complex protein RnfG;protein_id=YP_002402861.1;transl_table=11
NC_011748.1	RefSeq	gene	1859473	1860168	.	+	.	ID=gene1832;Name=rsxE;Dbxref=GeneID:7147551;gbkey=Gene;gene=rsxE;locus_tag=EC55989_1800
NC_011748.1	RefSeq	CDS	1859473	1860168	.	+	0	ID=cds1717;Name=YP_002402862.1;Parent=gene1832;Note=in Excherichia coli RsxABCDEG reduces SoxR which turns off induction of SoxS transcription factor in the absence of oxidizing agents%3B similar to the rnfABCDGE operon in Rhodobacter capsulatus involved in transferring electrons to nitrogenase;Dbxref=Genbank:YP_002402862.1,GeneID:7147551;gbkey=CDS;product=electron transport complex protein RsxE;protein_id=YP_002402862.1;transl_table=11
NC_011748.1	RefSeq	gene	1860168	1860803	.	+	.	ID=gene1833;Name=nth;Dbxref=GeneID:7147550;gbkey=Gene;gene=nth;locus_tag=EC55989_1801
NC_011748.1	RefSeq	CDS	1860168	1860803	.	+	0	ID=cds1718;Name=YP_002402863.1;Parent=gene1833;Note=DNA-%28apurinic or apyrimidinic site%29 lyase%3B has apurinic or apyrimidinic endonuclease activity and DNA N-glycosylase activity%3B removed damaged DNA at cytosines%2C thymines and guanines;Dbxref=Genbank:YP_002402863.1,GeneID:7147550;gbkey=CDS;product=endonuclease III;protein_id=YP_002402863.1;transl_table=11
NC_011748.1	RefSeq	gene	1861414	1862916	.	+	.	ID=gene1834;Name=tppB;Dbxref=GeneID:7147035;gbkey=Gene;gene=tppB;locus_tag=EC55989_1802
NC_011748.1	RefSeq	CDS	1861414	1862916	.	+	0	ID=cds1719;Name=YP_002402864.1;Parent=gene1834;Note=mutations in this gene confer resistance to the toxic peptide alafosfalin in Salmonella typhimurium%3B member of proton-dependent oligopeptide transport %28POT%29 system family%3B in Escherichia coli this gene is regulated by OmpR although not via osmoregulation;Dbxref=Genbank:YP_002402864.1,GeneID:7147035;gbkey=CDS;product=tripeptide transporter permease;protein_id=YP_002402864.1;transl_table=11
NC_011748.1	RefSeq	gene	1863022	1863627	.	+	.	ID=gene1835;Name=gst;Dbxref=GeneID:7148454;gbkey=Gene;gene=gst;locus_tag=EC55989_1803
NC_011748.1	RefSeq	CDS	1863022	1863627	.	+	0	ID=cds1720;Name=YP_002402865.1;Parent=gene1835;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 95096109%2C 2185038%2C 9680481%3B Product type e : enzyme;Dbxref=Genbank:YP_002402865.1,GeneID:7148454;gbkey=CDS;product=glutathionine S-transferase;protein_id=YP_002402865.1;transl_table=11
NC_011748.1	RefSeq	gene	1863671	1864534	.	-	.	ID=gene1836;Name=pdxY;Dbxref=GeneID:7146377;gbkey=Gene;gene=pdxY;locus_tag=EC55989_1804
NC_011748.1	RefSeq	CDS	1863671	1864534	.	-	0	ID=cds1721;Name=YP_002402866.1;Parent=gene1836;Note=catalyzes the formation of pyridoxal 5%27-phosphate from pyridoxal;Dbxref=Genbank:YP_002402866.1,GeneID:7146377;gbkey=CDS;product=pyridoxamine kinase;protein_id=YP_002402866.1;transl_table=11
NC_011748.1	RefSeq	gene	1864593	1865867	.	-	.	ID=gene1837;Name=tyrS;Dbxref=GeneID:7147129;gbkey=Gene;gene=tyrS;locus_tag=EC55989_1805
NC_011748.1	RefSeq	CDS	1864593	1865867	.	-	0	ID=cds1722;Name=YP_002402867.1;Parent=gene1837;Note=catalyzes the formation of tyrosyl-tRNA%28Tyr%29 from tyrosine and tRNA%28Tyr%29;Dbxref=Genbank:YP_002402867.1,GeneID:7147129;gbkey=CDS;product=tyrosyl-tRNA synthetase;protein_id=YP_002402867.1;transl_table=11
NC_011748.1	RefSeq	gene	1865996	1866652	.	-	.	ID=gene1838;Name=pdxH;Dbxref=GeneID:7147885;gbkey=Gene;gene=pdxH;locus_tag=EC55989_1806
NC_011748.1	RefSeq	CDS	1865996	1866652	.	-	0	ID=cds1723;Name=YP_002402868.1;Parent=gene1838;Note=catalyzes the formation of pyridoxal 5%27-phosphate from pyridoxamine 5%27-phosphate;Dbxref=Genbank:YP_002402868.1,GeneID:7147885;gbkey=CDS;product=pyridoxamine 5%27-phosphate oxidase;protein_id=YP_002402868.1;transl_table=11
NC_011748.1	RefSeq	gene	1866711	1867040	.	-	.	ID=gene1839;Name=ydhA;Dbxref=GeneID:7147126;gbkey=Gene;gene=ydhA;locus_tag=EC55989_1807
NC_011748.1	RefSeq	CDS	1866711	1867040	.	-	0	ID=cds1724;Name=YP_002402869.1;Parent=gene1839;Note=MliC%3B membrane-bound lysozyme inhibitor of c-type lysozyme;Dbxref=Genbank:YP_002402869.1,GeneID:7147126;gbkey=CDS;product=lysozyme inhibitor;protein_id=YP_002402869.1;transl_table=11
NC_011748.1	RefSeq	gene	1867138	1868247	.	-	.	ID=gene1840;Name=anmK;Dbxref=GeneID:7148456;gbkey=Gene;gene=anmK;locus_tag=EC55989_1808
NC_011748.1	RefSeq	CDS	1867138	1868247	.	-	0	ID=cds1725;Name=YP_002402870.1;Parent=gene1840;Note=catalyzes hydrolysis of 1%2C6-anhydro bond of anyhydro-N-acetylmuramic acid %28anhMurNAc%29 and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate%3B involved in murein recycling;Dbxref=Genbank:YP_002402870.1,GeneID:7148456;gbkey=CDS;product=anhydro-N-acetylmuramic acid kinase;protein_id=YP_002402870.1;transl_table=11
NC_011748.1	RefSeq	gene	1868521	1868988	.	+	.	ID=gene1841;Name=slyB;Dbxref=GeneID:7145501;gbkey=Gene;gene=slyB;locus_tag=EC55989_1809
NC_011748.1	RefSeq	CDS	1868521	1868988	.	+	0	ID=cds1726;Name=YP_002402871.1;Parent=gene1841;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 8544813%3B Product type lp : lipoprotein;Dbxref=Genbank:YP_002402871.1,GeneID:7145501;gbkey=CDS;product=outer membrane lipoprotein;protein_id=YP_002402871.1;transl_table=11
NC_011748.1	RefSeq	gene	1869035	1869469	.	-	.	ID=gene1842;Name=slyA;Dbxref=GeneID:7147663;gbkey=Gene;gene=slyA;locus_tag=EC55989_1810
NC_011748.1	RefSeq	CDS	1869035	1869469	.	-	0	ID=cds1727;Name=YP_002402872.1;Parent=gene1842;Note=Transcription regulator that can both activate or repress expression;Dbxref=Genbank:YP_002402872.1,GeneID:7147663;gbkey=CDS;product=transcriptional regulator SlyA;protein_id=YP_002402872.1;transl_table=11
NC_011748.1	RefSeq	gene	1869670	1869906	.	+	.	ID=gene1843;Name=ydhI;Dbxref=GeneID:7147662;gbkey=Gene;gene=ydhI;locus_tag=EC55989_1811
NC_011748.1	RefSeq	CDS	1869670	1869906	.	+	0	ID=cds1728;Name=YP_002402873.1;Parent=gene1843;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002402873.1,GeneID:7147662;gbkey=CDS;product=inner membrane protein;protein_id=YP_002402873.1;transl_table=11
NC_011748.1	RefSeq	gene	1869909	1870766	.	+	.	ID=gene1844;Name=ydhJ;Dbxref=GeneID:7148461;gbkey=Gene;gene=ydhJ;locus_tag=EC55989_1812
NC_011748.1	RefSeq	CDS	1869909	1870766	.	+	0	ID=cds1729;Name=YP_002402874.1;Parent=gene1844;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 12900028%3B Product type e : enzyme;Dbxref=Genbank:YP_002402874.1,GeneID:7148461;gbkey=CDS;product=undecaprenyl pyrophosphate phosphatase;protein_id=YP_002402874.1;transl_table=11
NC_011748.1	RefSeq	gene	1870766	1872778	.	+	.	ID=gene1845;Name=ydhK;Dbxref=GeneID:7148462;gbkey=Gene;gene=ydhK;locus_tag=EC55989_1813
NC_011748.1	RefSeq	CDS	1870766	1872778	.	+	0	ID=cds1730;Name=YP_002402875.1;Parent=gene1845;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002402875.1,GeneID:7148462;gbkey=CDS;product=inner membrane protein;protein_id=YP_002402875.1;transl_table=11
NC_011748.1	RefSeq	gene	1872779	1873300	.	-	.	ID=gene1846;Name=sodC;Dbxref=GeneID:7148463;gbkey=Gene;gene=sodC;locus_tag=EC55989_1814
NC_011748.1	RefSeq	CDS	1872779	1873300	.	-	0	ID=cds1731;Name=YP_002402876.1;Parent=gene1846;Note=SodC%3B copper and zinc binding%3B converts superoxide radicals to hydrogen peroxide and water;Dbxref=Genbank:YP_002402876.1,GeneID:7148463;gbkey=CDS;product=superoxide dismutase;protein_id=YP_002402876.1;transl_table=11
NC_011748.1	RefSeq	gene	1873381	1874277	.	-	.	ID=gene1847;Name=ydhF;Dbxref=GeneID:7147673;gbkey=Gene;gene=ydhF;locus_tag=EC55989_1815
NC_011748.1	RefSeq	CDS	1873381	1874277	.	-	0	ID=cds1732;Name=YP_002402877.1;Parent=gene1847;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002402877.1,GeneID:7147673;gbkey=CDS;product=oxidoreductase;protein_id=YP_002402877.1;transl_table=11
NC_011748.1	RefSeq	gene	1874326	1874736	.	-	.	ID=gene1848;Name=ydhL;Dbxref=GeneID:7148460;gbkey=Gene;gene=ydhL;locus_tag=EC55989_1816
NC_011748.1	RefSeq	CDS	1874326	1874736	.	-	0	ID=cds1733;Name=YP_002402878.1;Parent=gene1848;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402878.1,GeneID:7148460;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402878.1;transl_table=11
NC_011748.1	RefSeq	gene	1874752	1875267	.	+	.	ID=gene1849;Name=ydhM;Dbxref=GeneID:7148464;gbkey=Gene;gene=ydhM;locus_tag=EC55989_1817
NC_011748.1	RefSeq	CDS	1874752	1875267	.	+	0	ID=cds1734;Name=YP_002402879.1;Parent=gene1849;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pr :  regulator;Dbxref=Genbank:YP_002402879.1,GeneID:7148464;gbkey=CDS;product=DNA-binding transcriptional regulator;protein_id=YP_002402879.1;transl_table=11
NC_011748.1	RefSeq	gene	1875304	1876401	.	+	.	ID=gene1850;Name=nemA;Dbxref=GeneID:7148465;gbkey=Gene;gene=nemA;locus_tag=EC55989_1818
NC_011748.1	RefSeq	CDS	1875304	1876401	.	+	0	ID=cds1735;Name=YP_002402880.1;Parent=gene1850;Note=FMN-linked%3B catalyzes the formation of N-ethylsuccinimide from N-ethylmaleimide;Dbxref=Genbank:YP_002402880.1,GeneID:7148465;gbkey=CDS;product=N-ethylmaleimide reductase;protein_id=YP_002402880.1;transl_table=11
NC_011748.1	RefSeq	gene	1876482	1876889	.	+	.	ID=gene1851;Name=gloA;Dbxref=GeneID:7146984;gbkey=Gene;gene=gloA;locus_tag=EC55989_1819
NC_011748.1	RefSeq	CDS	1876482	1876889	.	+	0	ID=cds1736;Name=YP_002402881.1;Parent=gene1851;Note=Ni-dependent%3B catalyzes the formation of S-lactoylglutathione from methylglyoxal and glutathione;Dbxref=Genbank:YP_002402881.1,GeneID:7146984;gbkey=CDS;product=glyoxalase I;protein_id=YP_002402881.1;transl_table=11
NC_011748.1	RefSeq	gene	1876992	1877639	.	+	.	ID=gene1852;Name=rnt;Dbxref=GeneID:7146313;gbkey=Gene;gene=rnt;locus_tag=EC55989_1820
NC_011748.1	RefSeq	CDS	1876992	1877639	.	+	0	ID=cds1737;Name=YP_002402882.1;Parent=gene1852;Note=Responsible for the end-turnover of tRNA: specifically removes the terminal AMP residue from uncharged tRNA %28tRNA-C-C-A%29;Dbxref=Genbank:YP_002402882.1,GeneID:7146313;gbkey=CDS;product=ribonuclease T;protein_id=YP_002402882.1;transl_table=11
NC_011748.1	RefSeq	gene	1877732	1882348	.	+	.	ID=gene1853;Name=lhr;Dbxref=GeneID:7147456;gbkey=Gene;gene=lhr;locus_tag=EC55989_1821
NC_011748.1	RefSeq	CDS	1877732	1882348	.	+	0	ID=cds1738;Name=YP_002402883.1;Parent=gene1853;Note=similar to the DNA and RNA helicase superfamily II and eukaryotic DEAD family of helicases%3B longest known protein in E. coli;Dbxref=Genbank:YP_002402883.1,GeneID:7147456;gbkey=CDS;product=ATP-dependent helicase Lhr;protein_id=YP_002402883.1;transl_table=11
NC_011748.1	RefSeq	gene	1882399	1882746	.	-	.	ID=gene1854;Name=ydhD;Dbxref=GeneID:7146699;gbkey=Gene;gene=ydhD;locus_tag=EC55989_1822
NC_011748.1	RefSeq	CDS	1882399	1882746	.	-	0	ID=cds1739;Name=YP_002402884.1;Parent=gene1854;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 15833738%2C 15840565%2C 11950925%2C 12730244%3B Product type e : enzyme;Dbxref=Genbank:YP_002402884.1,GeneID:7146699;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402884.1;transl_table=11
NC_011748.1	RefSeq	gene	1883080	1883895	.	+	.	ID=gene1855;Name=ydhO;Dbxref=GeneID:7148459;gbkey=Gene;gene=ydhO;locus_tag=EC55989_1823
NC_011748.1	RefSeq	CDS	1883080	1883895	.	+	0	ID=cds1740;Name=YP_002402885.1;Parent=gene1855;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002402885.1,GeneID:7148459;gbkey=CDS;product=hydrolase;protein_id=YP_002402885.1;transl_table=11
NC_011748.1	RefSeq	gene	1884023	1884604	.	+	.	ID=gene1856;Name=sodB;Dbxref=GeneID:7148466;gbkey=Gene;gene=sodB;locus_tag=EC55989_1824
NC_011748.1	RefSeq	CDS	1884023	1884604	.	+	0	ID=cds1741;Name=YP_002402886.1;Parent=gene1856;Note=SodB%3B iron binding%3B present under aerobic and anaerobic conditions%3B destroys free radicals;Dbxref=Genbank:YP_002402886.1,GeneID:7148466;gbkey=CDS;product=superoxide dismutase;protein_id=YP_002402886.1;transl_table=11
NC_011748.1	RefSeq	gene	1884750	1885919	.	-	.	ID=gene1857;Name=ydhP;Dbxref=GeneID:7147672;gbkey=Gene;gene=ydhP;locus_tag=EC55989_1825
NC_011748.1	RefSeq	CDS	1884750	1885919	.	-	0	ID=cds1742;Name=YP_002402887.1;Parent=gene1857;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002402887.1,GeneID:7147672;gbkey=CDS;product=efflux protein%3B MFS family;protein_id=YP_002402887.1;transl_table=11
NC_011748.1	RefSeq	gene	1886473	1887498	.	+	.	ID=gene1858;Name=purR;Dbxref=GeneID:7148467;gbkey=Gene;gene=purR;locus_tag=EC55989_1826
NC_011748.1	RefSeq	CDS	1886473	1887498	.	+	0	ID=cds1743;Name=YP_002402888.1;Parent=gene1858;Note=binds to the purF operator and coregulates other genes for de novo purine nucleotide synthesis%3B is involved in regulation of purB%2C purC%2C purEK%2C purHD%2C purL%2C purMN and guaBA expression%3B binds hypoxanthine and guanine as inducers;Dbxref=Genbank:YP_002402888.1,GeneID:7148467;gbkey=CDS;product=DNA-binding transcriptional repressor PurR;protein_id=YP_002402888.1;transl_table=11
NC_011748.1	RefSeq	gene	1887495	1888427	.	-	.	ID=gene1859;Name=ydhB;Dbxref=GeneID:7147303;gbkey=Gene;gene=ydhB;locus_tag=EC55989_1827
NC_011748.1	RefSeq	CDS	1887495	1888427	.	-	0	ID=cds1744;Name=YP_002402889.1;Parent=gene1859;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 2404765%3B Product type pr :  regulator;Dbxref=Genbank:YP_002402889.1,GeneID:7147303;gbkey=CDS;product=DNA-binding transcriptional regulator;protein_id=YP_002402889.1;transl_table=11
NC_011748.1	RefSeq	gene	1888540	1889751	.	+	.	ID=gene1860;Name=ydhC;Dbxref=GeneID:7148457;gbkey=Gene;gene=ydhC;locus_tag=EC55989_1828
NC_011748.1	RefSeq	CDS	1888540	1889751	.	+	0	ID=cds1745;Name=YP_002402890.1;Parent=gene1860;Note=uncharacterized member of the major facilitator superfamily %28MFS%29;Dbxref=Genbank:YP_002402890.1,GeneID:7148457;gbkey=CDS;product=inner membrane transport protein YdhC;protein_id=YP_002402890.1;transl_table=11
NC_011748.1	RefSeq	gene	1890042	1891190	.	+	.	ID=gene1861;Name=cfa;Dbxref=GeneID:7148458;gbkey=Gene;gene=cfa;locus_tag=EC55989_1829
NC_011748.1	RefSeq	CDS	1890042	1891190	.	+	0	ID=cds1746;Name=YP_002402891.1;Parent=gene1861;Note=catalyzes the transfer of a methylene group from S-adenosyl-L-methionine to the cis double bond of an unsaturated fatty acid chain resulting in the replacement of the double bond with a methylene bridge;Dbxref=Genbank:YP_002402891.1,GeneID:7148458;gbkey=CDS;product=cyclopropane-fatty-acyl-phospholipid synthase;protein_id=YP_002402891.1;transl_table=11
NC_011748.1	RefSeq	gene	1891230	1891871	.	-	.	ID=gene1862;Name=ribC;Dbxref=GeneID:7145687;gbkey=Gene;gene=ribC;locus_tag=EC55989_1830
NC_011748.1	RefSeq	CDS	1891230	1891871	.	-	0	ID=cds1747;Name=YP_002402892.1;Parent=gene1862;Note=catalyzes the formation of riboflavin from 6%2C7-dimethyl-8-%281-D-ribityl%29lumazine;Dbxref=Genbank:YP_002402892.1,GeneID:7145687;gbkey=CDS;product=riboflavin synthase subunit alpha;protein_id=YP_002402892.1;transl_table=11
NC_011748.1	RefSeq	gene	1892086	1893459	.	+	.	ID=gene1863;Name=mdtK;Dbxref=GeneID:7147411;gbkey=Gene;gene=mdtK;locus_tag=EC55989_1831
NC_011748.1	RefSeq	CDS	1892086	1893459	.	+	0	ID=cds1748;Name=YP_002402893.1;Parent=gene1863;Note=NorM%3B MdtK%3B functions as a Na%28%2B%29%2Fdrug antiporter%3B inactivation in Vibrio cholerae results in susceptibility to fluoroquinolones;Dbxref=Genbank:YP_002402893.1,GeneID:7147411;gbkey=CDS;product=multidrug efflux protein;protein_id=YP_002402893.1;transl_table=11
NC_011748.1	RefSeq	gene	1893500	1894756	.	-	.	ID=gene1864;Name=ydhQ;Dbxref=GeneID:7146812;gbkey=Gene;gene=ydhQ;locus_tag=EC55989_1832
NC_011748.1	RefSeq	CDS	1893500	1894756	.	-	0	ID=cds1749;Name=YP_002402894.1;Parent=gene1864;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402894.1,GeneID:7146812;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402894.1;transl_table=11
NC_011748.1	RefSeq	gene	1895064	1895140	.	+	.	ID=gene1865;Name=EC55989_tRNA20;Dbxref=GeneID:7148468;gbkey=Gene;locus_tag=EC55989_tRNA20
NC_011748.1	RefSeq	tRNA	1895064	1895140	.	+	.	ID=rna72;Dbxref=GeneID:7148468;gbkey=tRNA;product=tRNA-Val
NC_011748.1	RefSeq	exon	1895064	1895140	.	+	.	ID=id134;Parent=rna72;Dbxref=GeneID:7148468;gbkey=tRNA;product=tRNA-Val
NC_011748.1	RefSeq	gene	1895145	1895221	.	+	.	ID=gene1866;Name=EC55989_tRNA21;Dbxref=GeneID:7145329;gbkey=Gene;locus_tag=EC55989_tRNA21
NC_011748.1	RefSeq	tRNA	1895145	1895221	.	+	.	ID=rna73;Dbxref=GeneID:7145329;gbkey=tRNA;product=tRNA-Val
NC_011748.1	RefSeq	exon	1895145	1895221	.	+	.	ID=id135;Parent=rna73;Dbxref=GeneID:7145329;gbkey=tRNA;product=tRNA-Val
NC_011748.1	RefSeq	gene	1895329	1895634	.	+	.	ID=gene1867;Name=ydhR;Dbxref=GeneID:7145330;gbkey=Gene;gene=ydhR;locus_tag=EC55989_1834
NC_011748.1	RefSeq	CDS	1895329	1895634	.	+	0	ID=cds1750;Name=YP_002402895.1;Parent=gene1867;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402895.1,GeneID:7145330;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402895.1;transl_table=11
NC_011748.1	RefSeq	gene	1895760	1897364	.	+	.	ID=gene1868;Name=ydhS;Dbxref=GeneID:7148469;gbkey=Gene;gene=ydhS;locus_tag=EC55989_1835
NC_011748.1	RefSeq	CDS	1895760	1897364	.	+	0	ID=cds1751;Name=YP_002402896.1;Parent=gene1868;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402896.1,GeneID:7148469;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402896.1;transl_table=11
NC_011748.1	RefSeq	gene	1897376	1898188	.	-	.	ID=gene1869;Name=ydhT;Dbxref=GeneID:7148470;gbkey=Gene;gene=ydhT;locus_tag=EC55989_1836
NC_011748.1	RefSeq	CDS	1897376	1898188	.	-	0	ID=cds1752;Name=YP_002402897.1;Parent=gene1869;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402897.1,GeneID:7148470;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402897.1;transl_table=11
NC_011748.1	RefSeq	gene	1898192	1898977	.	-	.	ID=gene1870;Name=ydhU;Dbxref=GeneID:7148471;gbkey=Gene;gene=ydhU;locus_tag=EC55989_1837
NC_011748.1	RefSeq	CDS	1898192	1898977	.	-	0	ID=cds1753;Name=YP_002402898.1;Parent=gene1870;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pc :  carrier;Dbxref=Genbank:YP_002402898.1,GeneID:7148471;gbkey=CDS;product=cytochrome b subunit of a reductase;protein_id=YP_002402898.1;transl_table=11
NC_011748.1	RefSeq	gene	1898974	1899642	.	-	.	ID=gene1871;Name=ydhX;Dbxref=GeneID:7148472;gbkey=Gene;gene=ydhX;locus_tag=EC55989_1838
NC_011748.1	RefSeq	CDS	1898974	1899642	.	-	0	ID=cds1754;Name=YP_002402899.1;Parent=gene1871;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pc :  carrier;Dbxref=Genbank:YP_002402899.1,GeneID:7148472;gbkey=CDS;product=4Fe-4S ferredoxin;protein_id=YP_002402899.1;transl_table=11
NC_011748.1	RefSeq	gene	1899706	1900353	.	-	.	ID=gene1872;Name=ydhW;Dbxref=GeneID:7148475;gbkey=Gene;gene=ydhW;locus_tag=EC55989_1839
NC_011748.1	RefSeq	CDS	1899706	1900353	.	-	0	ID=cds1755;Name=YP_002402900.1;Parent=gene1872;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402900.1,GeneID:7148475;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402900.1;transl_table=11
NC_011748.1	RefSeq	gene	1900357	1902459	.	-	.	ID=gene1873;Name=ydhV;Dbxref=GeneID:7148474;gbkey=Gene;gene=ydhV;locus_tag=EC55989_1840
NC_011748.1	RefSeq	CDS	1900357	1902459	.	-	0	ID=cds1756;Name=YP_002402901.1;Parent=gene1873;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002402901.1,GeneID:7148474;gbkey=CDS;product=oxidoreductase;protein_id=YP_002402901.1;transl_table=11
NC_011748.1	RefSeq	gene	1902480	1903106	.	-	.	ID=gene1874;Name=ydhY;Dbxref=GeneID:7148473;gbkey=Gene;gene=ydhY;locus_tag=EC55989_1841
NC_011748.1	RefSeq	CDS	1902480	1903106	.	-	0	ID=cds1757;Name=YP_002402902.1;Parent=gene1874;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pc :  carrier;Dbxref=Genbank:YP_002402902.1,GeneID:7148473;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402902.1;transl_table=11
NC_011748.1	RefSeq	gene	1903562	1903771	.	-	.	ID=gene1875;Name=ydhZ;Dbxref=GeneID:7148476;gbkey=Gene;gene=ydhZ;locus_tag=EC55989_1842
NC_011748.1	RefSeq	CDS	1903562	1903771	.	-	0	ID=cds1758;Name=YP_002402903.1;Parent=gene1875;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402903.1,GeneID:7148476;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402903.1;transl_table=11
NC_011748.1	RefSeq	gene	1904328	1905740	.	+	.	ID=gene1876;Name=pykF;Dbxref=GeneID:7148477;gbkey=Gene;gene=pykF;locus_tag=EC55989_1843
NC_011748.1	RefSeq	CDS	1904328	1905740	.	+	0	ID=cds1759;Name=YP_002402904.1;Parent=gene1876;Note=catalyzes the formation of phosphoenolpyruvate from pyruvate;Dbxref=Genbank:YP_002402904.1,GeneID:7148477;gbkey=CDS;product=pyruvate kinase;protein_id=YP_002402904.1;transl_table=11
NC_011748.1	RefSeq	gene	1906051	1906287	.	+	.	ID=gene1877;Name=lpp;Dbxref=GeneID:7147316;gbkey=Gene;gene=lpp;locus_tag=EC55989_1844
NC_011748.1	RefSeq	CDS	1906051	1906287	.	+	0	ID=cds1760;Name=YP_002402905.1;Parent=gene1877;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 334727%2C 338599%2C 322142%2C 353292%2C 391404%2C 4261992%2C 4575979%2C 6765942%3B Product type lp : lipoprotein;Dbxref=Genbank:YP_002402905.1,GeneID:7147316;gbkey=CDS;product=murein lipoprotein;protein_id=YP_002402905.1;transl_table=11
NC_011748.1	RefSeq	gene	1906351	1907355	.	-	.	ID=gene1878;Name=ynhG;Dbxref=GeneID:7146732;gbkey=Gene;gene=ynhG;locus_tag=EC55989_1845
NC_011748.1	RefSeq	CDS	1906351	1907355	.	-	0	ID=cds1761;Name=YP_002402906.1;Parent=gene1878;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402906.1,GeneID:7146732;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402906.1;transl_table=11
NC_011748.1	RefSeq	gene	1907504	1907920	.	-	.	ID=gene1879;Name=sufE;Dbxref=GeneID:7149323;gbkey=Gene;gene=sufE;locus_tag=EC55989_1846
NC_011748.1	RefSeq	CDS	1907504	1907920	.	-	0	ID=cds1762;Name=YP_002402907.1;Parent=gene1879;Note=Acts with SufS to catalyze the formation of L-alanine from L-cysteine;Dbxref=Genbank:YP_002402907.1,GeneID:7149323;gbkey=CDS;product=cysteine desufuration protein SufE;protein_id=YP_002402907.1;transl_table=11
NC_011748.1	RefSeq	gene	1907933	1909153	.	-	.	ID=gene1880;Name=sufS;Dbxref=GeneID:7147734;gbkey=Gene;gene=sufS;locus_tag=EC55989_1847
NC_011748.1	RefSeq	CDS	1907933	1909153	.	-	0	ID=cds1763;Name=YP_002402908.1;Parent=gene1880;Note=catalyzes the formation of L-alanine and selenide or sulfanylcysteine from selenocysteine or cysteine;Dbxref=Genbank:YP_002402908.1,GeneID:7147734;gbkey=CDS;product=bifunctional cysteine desulfurase%2Fselenocysteine lyase;protein_id=YP_002402908.1;transl_table=11
NC_011748.1	RefSeq	gene	1909150	1910421	.	-	.	ID=gene1881;Name=sufD;Dbxref=GeneID:7147736;gbkey=Gene;gene=sufD;locus_tag=EC55989_1848
NC_011748.1	RefSeq	CDS	1909150	1910421	.	-	0	ID=cds1764;Name=YP_002402909.1;Parent=gene1881;Note=with SufBC activates cysteine desulfurase SufS;Dbxref=Genbank:YP_002402909.1,GeneID:7147736;gbkey=CDS;product=cysteine desulfurase activator complex subunit SufD;protein_id=YP_002402909.1;transl_table=11
NC_011748.1	RefSeq	gene	1910396	1911142	.	-	.	ID=gene1882;Name=sufC;Dbxref=GeneID:7147733;gbkey=Gene;gene=sufC;locus_tag=EC55989_1849
NC_011748.1	RefSeq	CDS	1910396	1911142	.	-	0	ID=cds1765;Name=YP_002402910.1;Parent=gene1882;Note=part of SUF system involved in inserting iron-sulfur clusters into proteins%3B in Escherichia coli this protein forms a complex with SufBD%3B the SufBCD complex stimulates the cysteine desulfurase SufS in conjunction with SufE;Dbxref=Genbank:YP_002402910.1,GeneID:7147733;gbkey=CDS;product=cysteine desulfurase;protein_id=YP_002402910.1;transl_table=11
NC_011748.1	RefSeq	gene	1911152	1912639	.	-	.	ID=gene1883;Name=sufB;Dbxref=GeneID:7147732;gbkey=Gene;gene=sufB;locus_tag=EC55989_1850
NC_011748.1	RefSeq	CDS	1911152	1912639	.	-	0	ID=cds1766;Name=YP_002402911.1;Parent=gene1883;Note=with SufCD activates cysteine desulfurase SufS;Dbxref=Genbank:YP_002402911.1,GeneID:7147732;gbkey=CDS;product=cysteine desulfurase activator complex subunit SufB;protein_id=YP_002402911.1;transl_table=11
NC_011748.1	RefSeq	gene	1912648	1913016	.	-	.	ID=gene1884;Name=sufA;Dbxref=GeneID:7147731;gbkey=Gene;gene=sufA;locus_tag=EC55989_1851
NC_011748.1	RefSeq	CDS	1912648	1913016	.	-	0	ID=cds1767;Name=YP_002402912.1;Parent=gene1884;Note=functions as a scaffold on which iron-sulfur clusters %28%5B2Fe-2S%5D%3B %5B4Fe-4S%5D%29 are assembled%3B forms a homodimer%3B similar to IscA protein;Dbxref=Genbank:YP_002402912.1,GeneID:7147731;gbkey=CDS;product=iron-sulfur cluster assembly scaffold protein;protein_id=YP_002402912.1;transl_table=11
NC_011748.1	RefSeq	gene	1913343	1913410	.	+	.	ID=gene1885;Name=rydB;Dbxref=GeneID:7147730;gbkey=Gene;gene=rydB;locus_tag=EC55989_misc_RNA_37
NC_011748.1	RefSeq	transcript	1913343	1913410	.	+	.	ID=rna74;Parent=gene1885;Dbxref=GeneID:7147730;gbkey=misc_RNA;product=RydB
NC_011748.1	RefSeq	exon	1913343	1913410	.	+	.	ID=id136;Parent=rna74;Dbxref=GeneID:7147730;gbkey=misc_RNA;product=RydB
NC_011748.1	RefSeq	gene	1913565	1913834	.	-	.	ID=gene1886;Name=ydiH;Dbxref=GeneID:7147576;gbkey=Gene;gene=ydiH;locus_tag=EC55989_1852
NC_011748.1	RefSeq	CDS	1913565	1913834	.	-	0	ID=cds1768;Name=YP_002402913.1;Parent=gene1886;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402913.1,GeneID:7147576;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402913.1;transl_table=11
NC_011748.1	RefSeq	gene	1913853	1914263	.	-	.	ID=gene1887;Name=ydiI;Dbxref=GeneID:7148483;gbkey=Gene;gene=ydiI;locus_tag=EC55989_1853
NC_011748.1	RefSeq	CDS	1913853	1914263	.	-	0	ID=cds1769;Name=YP_002402914.1;Parent=gene1887;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 15808744%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002402914.1,GeneID:7148483;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402914.1;transl_table=11
NC_011748.1	RefSeq	gene	1914260	1917316	.	-	.	ID=gene1888;Name=ydiJ;Dbxref=GeneID:7148484;gbkey=Gene;gene=ydiJ;locus_tag=EC55989_1854
NC_011748.1	RefSeq	CDS	1914260	1917316	.	-	0	ID=cds1770;Name=YP_002402915.1;Parent=gene1888;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 11102686%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002402915.1,GeneID:7148484;gbkey=CDS;product=FAD-linked oxidoreductase;protein_id=YP_002402915.1;transl_table=11
NC_011748.1	RefSeq	gene	1917705	1918817	.	+	.	ID=gene1889;Name=ydiK;Dbxref=GeneID:7148485;gbkey=Gene;gene=ydiK;locus_tag=EC55989_1855
NC_011748.1	RefSeq	CDS	1917705	1918817	.	+	0	ID=cds1771;Name=YP_002402916.1;Parent=gene1889;Note=YdiK%3B inner membrane protein%3B ydiK promoter presents a PurR sequence%2C suggesting that its expression is purine-regulated%3B unknown function;Dbxref=Genbank:YP_002402916.1,GeneID:7148485;gbkey=CDS;product=inner membrane protein;protein_id=YP_002402916.1;transl_table=11
NC_011748.1	RefSeq	gene	1919003	1919103	.	+	.	ID=gene1890;Name=rprA;Dbxref=GeneID:7148486;gbkey=Gene;gene=rprA;locus_tag=EC55989_misc_RNA_38
NC_011748.1	RefSeq	transcript	1919003	1919103	.	+	.	ID=rna75;Parent=gene1890;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 12410838%3B Product type n : RNA;Dbxref=GeneID:7148486;gbkey=misc_RNA;product=RprA
NC_011748.1	RefSeq	exon	1919003	1919103	.	+	.	ID=id137;Parent=rna75;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 12410838%3B Product type n : RNA;Dbxref=GeneID:7148486;gbkey=misc_RNA;product=RprA
NC_011748.1	RefSeq	gene	1919246	1919602	.	+	.	ID=gene1891;Name=ydiL;Dbxref=GeneID:7147504;gbkey=Gene;gene=ydiL;locus_tag=EC55989_1856
NC_011748.1	RefSeq	CDS	1919246	1919602	.	+	0	ID=cds1772;Name=YP_002402917.1;Parent=gene1891;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402917.1,GeneID:7147504;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402917.1;transl_table=11
NC_011748.1	RefSeq	gene	1919702	1920916	.	+	.	ID=gene1892;Name=ydiM;Dbxref=GeneID:7148487;gbkey=Gene;gene=ydiM;locus_tag=EC55989_1857
NC_011748.1	RefSeq	CDS	1919702	1920916	.	+	0	ID=cds1773;Name=YP_002402918.1;Parent=gene1892;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002402918.1,GeneID:7148487;gbkey=CDS;product=transporter%3B MFS superfamily;protein_id=YP_002402918.1;transl_table=11
NC_011748.1	RefSeq	gene	1921143	1922408	.	+	.	ID=gene1893;Name=ydiN;Dbxref=GeneID:7148488;gbkey=Gene;gene=ydiN;locus_tag=EC55989_1858
NC_011748.1	RefSeq	CDS	1921143	1922408	.	+	0	ID=cds1774;Name=YP_002402919.1;Parent=gene1893;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002402919.1,GeneID:7148488;gbkey=CDS;product=transporter;protein_id=YP_002402919.1;transl_table=11
NC_011748.1	RefSeq	gene	1922420	1923286	.	+	.	ID=gene1894;Name=ydiB;Dbxref=GeneID:7148489;gbkey=Gene;gene=ydiB;locus_tag=EC55989_1859
NC_011748.1	RefSeq	CDS	1922420	1923286	.	+	0	ID=cds1775;Name=YP_002402920.1;Parent=gene1894;Note=YdiB%3B quinate%2Fshikimate dehydrogenase from Escherichia coli uses both NAD and NAD%28P%29 to convert quinate and shikimate to 3-dehydroquinate and 3-dehydroshikimate;Dbxref=Genbank:YP_002402920.1,GeneID:7148489;gbkey=CDS;product=quinate%2Fshikimate dehydrogenase;protein_id=YP_002402920.1;transl_table=11
NC_011748.1	RefSeq	gene	1923317	1924075	.	+	.	ID=gene1895;Name=aroD;Dbxref=GeneID:7148479;gbkey=Gene;gene=aroD;locus_tag=EC55989_1860
NC_011748.1	RefSeq	CDS	1923317	1924075	.	+	0	ID=cds1776;Name=YP_002402921.1;Parent=gene1895;Note=catalyzes the dehydration of 3-dehydroquinate to form 3-dehydroshikimate in aromatic amino acid biosynthesis;Dbxref=Genbank:YP_002402921.1,GeneID:7148479;gbkey=CDS;product=3-dehydroquinate dehydratase;protein_id=YP_002402921.1;transl_table=11
NC_011748.1	RefSeq	gene	1924219	1925814	.	+	.	ID=gene1896;Name=ydiF;Dbxref=GeneID:7145542;gbkey=Gene;gene=ydiF;locus_tag=EC55989_1861
NC_011748.1	RefSeq	CDS	1924219	1925814	.	+	0	ID=cds1777;Name=YP_002402922.1;Parent=gene1896;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 16253988%3B Product type e : enzyme;Dbxref=Genbank:YP_002402922.1,GeneID:7145542;gbkey=CDS;product=short chain acyl-CoA transferase: fused alpha subunit %3B beta subunit;protein_id=YP_002402922.1;transl_table=11
NC_011748.1	RefSeq	gene	1925828	1926979	.	+	.	ID=gene1897;Name=ydiO;Dbxref=GeneID:7148482;gbkey=Gene;gene=ydiO;locus_tag=EC55989_1862
NC_011748.1	RefSeq	CDS	1925828	1926979	.	+	0	ID=cds1778;Name=YP_002402923.1;Parent=gene1897;Note=may play a role in electron transport between the anaerobic fatty acid oxidation pathway and the respiratory chain;Dbxref=Genbank:YP_002402923.1,GeneID:7148482;gbkey=CDS;product=acyl-CoA dehydrogenase;protein_id=YP_002402923.1;transl_table=11
NC_011748.1	RefSeq	gene	1927022	1927933	.	-	.	ID=gene1898;Name=ydiP;Dbxref=GeneID:7148490;gbkey=Gene;gene=ydiP;locus_tag=EC55989_1863
NC_011748.1	RefSeq	CDS	1927022	1927933	.	-	0	ID=cds1779;Name=YP_002402924.1;Parent=gene1898;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pr :  regulator;Dbxref=Genbank:YP_002402924.1,GeneID:7148490;gbkey=CDS;product=DNA-binding transcriptional regulator;protein_id=YP_002402924.1;transl_table=11
NC_011748.1	RefSeq	gene	1928036	1928212	.	-	.	ID=gene1899;Name=EC55989_1864;Dbxref=GeneID:7148491;gbkey=Gene;locus_tag=EC55989_1864
NC_011748.1	RefSeq	CDS	1928036	1928212	.	-	0	ID=cds1780;Name=YP_002402925.1;Parent=gene1899;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402925.1,GeneID:7148491;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402925.1;transl_table=11
NC_011748.1	RefSeq	gene	1928249	1929013	.	+	.	ID=gene1900;Name=ydiQ;Dbxref=GeneID:7144669;gbkey=Gene;gene=ydiQ;locus_tag=EC55989_1865
NC_011748.1	RefSeq	CDS	1928249	1929013	.	+	0	ID=cds1781;Name=YP_002402926.1;Parent=gene1900;Note=YdiO%2C YdiQ%2C YdiR%2C YdiS%2C and YdiT may play a role in electron transport between the anaerobic fatty acid oxidation pathway and the respiratory chain;Dbxref=Genbank:YP_002402926.1,GeneID:7144669;gbkey=CDS;product=electron transfer flavoprotein YdiQ;protein_id=YP_002402926.1;transl_table=11
NC_011748.1	RefSeq	gene	1929033	1929971	.	+	.	ID=gene1901;Name=ydiR;Dbxref=GeneID:7148492;gbkey=Gene;gene=ydiR;locus_tag=EC55989_1866
NC_011748.1	RefSeq	CDS	1929033	1929971	.	+	0	ID=cds1782;Name=YP_002402927.1;Parent=gene1901;Note=May play a role in a redox process;Dbxref=Genbank:YP_002402927.1,GeneID:7148492;gbkey=CDS;product=electron transfer flavoprotein subunit YdiR;protein_id=YP_002402927.1;transl_table=11
NC_011748.1	RefSeq	gene	1930027	1931316	.	+	.	ID=gene1902;Name=ydiS;Dbxref=GeneID:7148493;gbkey=Gene;gene=ydiS;locus_tag=EC55989_1867
NC_011748.1	RefSeq	CDS	1930027	1931316	.	+	0	ID=cds1783;Name=YP_002402928.1;Parent=gene1902;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pc :  carrier;Dbxref=Genbank:YP_002402928.1,GeneID:7148493;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402928.1;transl_table=11
NC_011748.1	RefSeq	gene	1931313	1931606	.	+	.	ID=gene1903;Name=ydiT;Dbxref=GeneID:7148494;gbkey=Gene;gene=ydiT;locus_tag=EC55989_1868
NC_011748.1	RefSeq	CDS	1931313	1931606	.	+	0	ID=cds1784;Name=YP_002402929.1;Parent=gene1903;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pc :  carrier;Dbxref=Genbank:YP_002402929.1,GeneID:7148494;gbkey=CDS;product=4Fe-4S ferredoxin;protein_id=YP_002402929.1;transl_table=11
NC_011748.1	RefSeq	gene	1931609	1933309	.	+	.	ID=gene1904;Name=ydiD;Dbxref=GeneID:7148495;gbkey=Gene;gene=ydiD;locus_tag=EC55989_1869
NC_011748.1	RefSeq	CDS	1931609	1933309	.	+	0	ID=cds1785;Name=YP_002402930.1;Parent=gene1904;Note=acts in anaerobic beta-oxidation of fatty acids%3B possible ligase%2Fsynthase involved in anaerobic growth on fatty acids;Dbxref=Genbank:YP_002402930.1,GeneID:7148495;gbkey=CDS;product=short chain acyl-CoA synthetase;protein_id=YP_002402930.1;transl_table=11
NC_011748.1	RefSeq	gene	1933366	1935744	.	-	.	ID=gene1905;Name=pps;Dbxref=GeneID:7148480;gbkey=Gene;gene=pps;locus_tag=EC55989_1870
NC_011748.1	RefSeq	CDS	1933366	1935744	.	-	0	ID=cds1786;Name=YP_002402931.1;Parent=gene1905;Note=catalyzes the formation of phosphoenolpyruvate from pyruvate;Dbxref=Genbank:YP_002402931.1,GeneID:7148480;gbkey=CDS;product=phosphoenolpyruvate synthase;protein_id=YP_002402931.1;transl_table=11
NC_011748.1	RefSeq	gene	1936077	1936910	.	+	.	ID=gene1906;Name=ydiA;Dbxref=GeneID:7147234;gbkey=Gene;gene=ydiA;locus_tag=EC55989_1871
NC_011748.1	RefSeq	CDS	1936077	1936910	.	+	0	ID=cds1787;Name=YP_002402932.1;Parent=gene1906;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402932.1,GeneID:7147234;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402932.1;transl_table=11
NC_011748.1	RefSeq	gene	1937067	1938113	.	+	.	ID=gene1907;Name=aroH;Dbxref=GeneID:7148478;gbkey=Gene;gene=aroH;locus_tag=EC55989_1872
NC_011748.1	RefSeq	CDS	1937067	1938113	.	+	0	ID=cds1788;Name=YP_002402933.1;Parent=gene1907;Note=tryptophan sensitive%3B catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate;Dbxref=Genbank:YP_002402933.1,GeneID:7148478;gbkey=CDS;product=phospho-2-dehydro-3-deoxyheptonate aldolase;protein_id=YP_002402933.1;transl_table=11
NC_011748.1	RefSeq	gene	1938245	1938436	.	+	.	ID=gene1908;Name=ydiE;Dbxref=GeneID:7145546;gbkey=Gene;gene=ydiE;locus_tag=EC55989_1873
NC_011748.1	RefSeq	CDS	1938245	1938436	.	+	0	ID=cds1789;Name=YP_002402934.1;Parent=gene1908;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 15039350;Dbxref=Genbank:YP_002402934.1,GeneID:7145546;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402934.1;transl_table=11
NC_011748.1	RefSeq	gene	1938440	1939876	.	-	.	ID=gene1909;Name=ydiU;Dbxref=GeneID:7148481;gbkey=Gene;gene=ydiU;locus_tag=EC55989_1874
NC_011748.1	RefSeq	CDS	1938440	1939876	.	-	0	ID=cds1790;Name=YP_002402935.1;Parent=gene1909;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402935.1,GeneID:7148481;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402935.1;transl_table=11
NC_011748.1	RefSeq	gene	1939939	1940652	.	-	.	ID=gene1910;Name=ydiV;Dbxref=GeneID:7148496;gbkey=Gene;gene=ydiV;locus_tag=EC55989_1875
NC_011748.1	RefSeq	CDS	1939939	1940652	.	-	0	ID=cds1791;Name=YP_002402936.1;Parent=gene1910;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402936.1,GeneID:7148496;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402936.1;transl_table=11
NC_011748.1	RefSeq	gene	1940899	1941363	.	-	.	ID=gene1911;Name=nlpC;Dbxref=GeneID:7148497;gbkey=Gene;gene=nlpC;locus_tag=EC55989_1876
NC_011748.1	RefSeq	CDS	1940899	1941363	.	-	0	ID=cds1792;Name=YP_002402937.1;Parent=gene1911;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 12620121%3B Product type lp : lipoprotein;Dbxref=Genbank:YP_002402937.1,GeneID:7148497;gbkey=CDS;product=peptidase lipoprotein;protein_id=YP_002402937.1;transl_table=11
NC_011748.1	RefSeq	gene	1941441	1942190	.	-	.	ID=gene1912;Name=btuD;Dbxref=GeneID:7147008;gbkey=Gene;gene=btuD;locus_tag=EC55989_1877
NC_011748.1	RefSeq	CDS	1941441	1942190	.	-	0	ID=cds1793;Name=YP_002402938.1;Parent=gene1912;Note=ATP-binding protein that acts with the transmembrane protein BtuC and the solute binding protein BtuF to transport vitamin B12 into the cell;Dbxref=Genbank:YP_002402938.1,GeneID:7147008;gbkey=CDS;product=vitamin B12-transporter ATPase;protein_id=YP_002402938.1;transl_table=11
NC_011748.1	RefSeq	gene	1942190	1942741	.	-	.	ID=gene1913;Name=btuE;Dbxref=GeneID:7145641;gbkey=Gene;gene=btuE;locus_tag=EC55989_1878
NC_011748.1	RefSeq	CDS	1942190	1942741	.	-	0	ID=cds1794;Name=YP_002402939.1;Parent=gene1913;Note=similar to glutathione peroxidase%3B member of the btuCED operon which is required for vitamin B12 transport across the inner membrane;Dbxref=Genbank:YP_002402939.1,GeneID:7145641;gbkey=CDS;product=glutathione peroxidase;protein_id=YP_002402939.1;transl_table=11
NC_011748.1	RefSeq	gene	1942804	1943784	.	-	.	ID=gene1914;Name=btuC;Dbxref=GeneID:7145642;gbkey=Gene;gene=btuC;locus_tag=EC55989_1879
NC_011748.1	RefSeq	CDS	1942804	1943784	.	-	0	ID=cds1795;Name=YP_002402940.1;Parent=gene1914;Note=with BtuD and BtuF transports vitamin B12 into the cell;Dbxref=Genbank:YP_002402940.1,GeneID:7145642;gbkey=CDS;product=vtamin B12-transporter permease;protein_id=YP_002402940.1;transl_table=11
NC_011748.1	RefSeq	gene	1943885	1944184	.	-	.	ID=gene1915;Name=ihfA;Dbxref=GeneID:7145640;gbkey=Gene;gene=ihfA;locus_tag=EC55989_1880
NC_011748.1	RefSeq	CDS	1943885	1944184	.	-	0	ID=cds1796;Name=YP_002402941.1;Parent=gene1915;Note=This protein is one of the two subunits of integration host factor%2C a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control;Dbxref=Genbank:YP_002402941.1,GeneID:7145640;gbkey=CDS;product=integration host factor subunit alpha;protein_id=YP_002402941.1;transl_table=11
NC_011748.1	RefSeq	gene	1944189	1946576	.	-	.	ID=gene1916;Name=pheT;Dbxref=GeneID:7146546;gbkey=Gene;gene=pheT;locus_tag=EC55989_1881
NC_011748.1	RefSeq	CDS	1944189	1946576	.	-	0	ID=cds1797;Name=YP_002402942.1;Parent=gene1916;Note=catalyzes a two-step reaction%2C first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B forms a tetramer of alpha%282%29beta%282%29%3B binds two magnesium ions per tetramer%3B type 2 subfamily;Dbxref=Genbank:YP_002402942.1,GeneID:7146546;gbkey=CDS;product=phenylalanyl-tRNA synthetase subunit beta;protein_id=YP_002402942.1;transl_table=11
NC_011748.1	RefSeq	gene	1946591	1947574	.	-	.	ID=gene1917;Name=pheS;Dbxref=GeneID:7147162;gbkey=Gene;gene=pheS;locus_tag=EC55989_1882
NC_011748.1	RefSeq	CDS	1946591	1947574	.	-	0	ID=cds1798;Name=YP_002402943.1;Parent=gene1917;Note=catalyzes a two-step reaction%2C first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B forms a heterotetramer of alpha%282%29beta%282%29%3B binds two magnesium ions per tetramer%3B type 1 subfamily;Dbxref=Genbank:YP_002402943.1,GeneID:7147162;gbkey=CDS;product=phenylalanyl-tRNA synthetase subunit alpha;protein_id=YP_002402943.1;transl_table=11
NC_011748.1	RefSeq	gene	1947857	1947901	.	-	.	ID=gene1918;Name=pheM;Dbxref=GeneID:7147161;gbkey=Gene;gene=pheM;locus_tag=EC55989_5069
NC_011748.1	RefSeq	CDS	1947857	1947901	.	-	0	ID=cds1799;Name=YP_002402944.1;Parent=gene1918;Note=Evidence 1c : Function experimentally demonstrated in the studied genus%3B Product type l : leader peptide;Dbxref=Genbank:YP_002402944.1,GeneID:7147161;gbkey=CDS;product=phenylalanyl-tRNA synthetase operon leader peptide;protein_id=YP_002402944.1;transl_table=11
NC_011748.1	RefSeq	gene	1948024	1948380	.	-	.	ID=gene1919;Name=rplT;Dbxref=GeneID:7147159;gbkey=Gene;gene=rplT;locus_tag=EC55989_1883
NC_011748.1	RefSeq	CDS	1948024	1948380	.	-	0	ID=cds1800;Name=YP_002402945.1;Parent=gene1919;Note=binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit;Dbxref=Genbank:YP_002402945.1,GeneID:7147159;gbkey=CDS;product=50S ribosomal protein L20;protein_id=YP_002402945.1;transl_table=11
NC_011748.1	RefSeq	gene	1948433	1948630	.	-	.	ID=gene1920;Name=rpmI;Dbxref=GeneID:7147480;gbkey=Gene;gene=rpmI;locus_tag=EC55989_1884
NC_011748.1	RefSeq	CDS	1948433	1948630	.	-	0	ID=cds1801;Name=YP_002402946.1;Parent=gene1920;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 93085722%2C 10094780%2C 3298224%2C 3542048%2C 6325158%3B Product type s : structure;Dbxref=Genbank:YP_002402946.1,GeneID:7147480;gbkey=CDS;product=50S ribosomal protein L35;protein_id=YP_002402946.1;transl_table=11
NC_011748.1	RefSeq	gene	1948727	1949161	.	-	.	ID=gene1921;Name=infC;Dbxref=GeneID:7147494;gbkey=Gene;gene=infC;locus_tag=EC55989_1885;pseudo=true
NC_011748.1	RefSeq	region	1948727	1949161	.	-	.	ID=id138;Note=fragment of protein chain initiation factor IF-3 %28partial%29%3BEvidence 7 : Gene remnant%3B Product type f : factor;Dbxref=GeneID:7147494;gbkey=misc_feature
NC_011748.1	RefSeq	gene	1949273	1951201	.	-	.	ID=gene1922;Name=thrS;Dbxref=GeneID:7146567;gbkey=Gene;gene=thrS;locus_tag=EC55989_1886
NC_011748.1	RefSeq	CDS	1949273	1951201	.	-	0	ID=cds1802;Name=YP_002402947.1;Parent=gene1922;Note=catalyzes the formation of threonyl-tRNA%28Thr%29 from threonine and tRNA%28Thr%29%3B catalyzes a two-step reaction%2C first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA;Dbxref=Genbank:YP_002402947.1,GeneID:7146567;gbkey=CDS;product=threonyl-tRNA synthetase;protein_id=YP_002402947.1;transl_table=11
NC_011748.1	RefSeq	gene	1951725	1952840	.	+	.	ID=gene1923;Name=EC55989_1887;Dbxref=GeneID:7147798;gbkey=Gene;locus_tag=EC55989_1887;pseudo=true
NC_011748.1	RefSeq	region	1951725	1952840	.	+	.	ID=id139;Note=fragment of  ankyrin repeat regulatory protein %28part 1%29%3BEvidence 7 : Gene remnant%3B Product type pr :  regulator;Dbxref=GeneID:7147798;gbkey=misc_feature
NC_011748.1	RefSeq	gene	1952862	1953623	.	+	.	ID=gene1924;Name=EC55989_1888;Dbxref=GeneID:7144670;gbkey=Gene;locus_tag=EC55989_1888;pseudo=true
NC_011748.1	RefSeq	region	1952862	1953623	.	+	.	ID=id140;Note=fragment of  ankyrin repeat regulatory protein %28part 2%29%3BEvidence 7 : Gene remnant%3B Product type pr :  regulator;Dbxref=GeneID:7144670;gbkey=misc_feature
NC_011748.1	RefSeq	gene	1953959	1954717	.	-	.	ID=gene1925;Name=ydiY;Dbxref=GeneID:7144671;gbkey=Gene;gene=ydiY;locus_tag=EC55989_1889
NC_011748.1	RefSeq	CDS	1953959	1954717	.	-	0	ID=cds1803;Name=YP_002402948.1;Parent=gene1925;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402948.1,GeneID:7144671;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402948.1;transl_table=11
NC_011748.1	RefSeq	gene	1955004	1955933	.	+	.	ID=gene1926;Name=pfkB;Dbxref=GeneID:7148498;gbkey=Gene;gene=pfkB;locus_tag=EC55989_1890
NC_011748.1	RefSeq	CDS	1955004	1955933	.	+	0	ID=cds1804;Name=YP_002402949.1;Parent=gene1926;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 78194149%2C 88292964%2C 6235149%2C 6310120%3B Product type e : enzyme;Dbxref=Genbank:YP_002402949.1,GeneID:7148498;gbkey=CDS;product=6-phosphofructokinase;protein_id=YP_002402949.1;transl_table=11
NC_011748.1	RefSeq	gene	1956034	1956324	.	+	.	ID=gene1927;Name=ydiZ;Dbxref=GeneID:7147140;gbkey=Gene;gene=ydiZ;locus_tag=EC55989_1891
NC_011748.1	RefSeq	CDS	1956034	1956324	.	+	0	ID=cds1805;Name=YP_002402950.1;Parent=gene1927;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402950.1,GeneID:7147140;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402950.1;transl_table=11
NC_011748.1	RefSeq	gene	1956430	1957290	.	+	.	ID=gene1928;Name=yniA;Dbxref=GeneID:7148499;gbkey=Gene;gene=yniA;locus_tag=EC55989_1892
NC_011748.1	RefSeq	CDS	1956430	1957290	.	+	0	ID=cds1806;Name=YP_002402951.1;Parent=gene1928;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002402951.1,GeneID:7148499;gbkey=CDS;product=phosphotransferase%2Fkinase;protein_id=YP_002402951.1;transl_table=11
NC_011748.1	RefSeq	gene	1957331	1957867	.	-	.	ID=gene1929;Name=yniB;Dbxref=GeneID:7149324;gbkey=Gene;gene=yniB;locus_tag=EC55989_1893
NC_011748.1	RefSeq	CDS	1957331	1957867	.	-	0	ID=cds1807;Name=YP_002402952.1;Parent=gene1929;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002402952.1,GeneID:7149324;gbkey=CDS;product=inner membrane protein;protein_id=YP_002402952.1;transl_table=11
NC_011748.1	RefSeq	gene	1958014	1958682	.	+	.	ID=gene1930;Name=yniC;Dbxref=GeneID:7149325;gbkey=Gene;gene=yniC;locus_tag=EC55989_1894
NC_011748.1	RefSeq	CDS	1958014	1958682	.	+	0	ID=cds1808;Name=YP_002402953.1;Parent=gene1930;Note=YniC%3B catalyzes the dephosphorylation of 2-deoxyglucose 6-phosphate%2C mannose 6-phosphate and p-nitrophenyl phosphate;Dbxref=Genbank:YP_002402953.1,GeneID:7149325;gbkey=CDS;product=2-deoxyglucose-6-phosphatase;protein_id=YP_002402953.1;transl_table=11
NC_011748.1	RefSeq	gene	1958845	1959435	.	+	.	ID=gene1931;Name=ydjM;Dbxref=GeneID:7149326;gbkey=Gene;gene=ydjM;locus_tag=EC55989_1895
NC_011748.1	RefSeq	CDS	1958845	1959435	.	+	0	ID=cds1809;Name=YP_002402954.1;Parent=gene1931;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 10760155%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002402954.1,GeneID:7149326;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402954.1;transl_table=11
NC_011748.1	RefSeq	gene	1959568	1960959	.	+	.	ID=gene1932;Name=ydjN;Dbxref=GeneID:7148509;gbkey=Gene;gene=ydjN;locus_tag=EC55989_1896
NC_011748.1	RefSeq	CDS	1959568	1960959	.	+	0	ID=cds1810;Name=YP_002402955.1;Parent=gene1932;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002402955.1,GeneID:7148509;gbkey=CDS;product=cation-acid symporter;protein_id=YP_002402955.1;transl_table=11
NC_011748.1	RefSeq	gene	1960963	1961400	.	-	.	ID=gene1933;Name=ydjO;Dbxref=GeneID:7148510;gbkey=Gene;gene=ydjO;locus_tag=EC55989_1897;pseudo=true
NC_011748.1	RefSeq	region	1960963	1961400	.	-	.	ID=id141;Note=fragment of conserved hypothetical protein %28part 2%29%3BEvidence 7 : Gene remnant;Dbxref=GeneID:7148510;gbkey=misc_feature
NC_011748.1	RefSeq	gene	1961410	1961778	.	-	.	ID=gene1934;Name=ydjO;Dbxref=GeneID:7148511;gbkey=Gene;gene=ydjO;locus_tag=EC55989_1898;pseudo=true
NC_011748.1	RefSeq	region	1961410	1961778	.	-	.	ID=id142;Note=fragment of conserved hypothetical protein %28part 1%29%3BEvidence 7 : Gene remnant;Dbxref=GeneID:7148511;gbkey=misc_feature
NC_011748.1	RefSeq	gene	1962055	1962318	.	-	.	ID=gene1935;Name=cedA;Dbxref=GeneID:7148512;gbkey=Gene;gene=cedA;locus_tag=EC55989_1899
NC_011748.1	RefSeq	CDS	1962055	1962318	.	-	0	ID=cds1811;Name=YP_002402956.1;Parent=gene1935;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 9427399%3B Product type cp : cell process;Dbxref=Genbank:YP_002402956.1,GeneID:7148512;gbkey=CDS;product=cell division modulator;protein_id=YP_002402956.1;transl_table=11
NC_011748.1	RefSeq	gene	1962501	1964762	.	+	.	ID=gene1936;Name=katE;Dbxref=GeneID:7145686;gbkey=Gene;gene=katE;locus_tag=EC55989_1900
NC_011748.1	RefSeq	CDS	1962501	1964762	.	+	0	ID=cds1812;Name=YP_002402957.1;Parent=gene1936;Note=Catalase HPII%3B monofunctional catalase that decomposes hydrogen peroxide into water and oxygen%3B serves to protect cells from the toxic effects of hydrogen peroxide;Dbxref=Genbank:YP_002402957.1,GeneID:7145686;gbkey=CDS;product=hydroperoxidase II;protein_id=YP_002402957.1;transl_table=11
NC_011748.1	RefSeq	gene	1964809	1965567	.	-	.	ID=gene1937;Name=chbG;Dbxref=GeneID:7146645;gbkey=Gene;gene=chbG;locus_tag=EC55989_1901
NC_011748.1	RefSeq	CDS	1964809	1965567	.	-	0	ID=cds1813;Name=YP_002402958.1;Parent=gene1937;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 20042356%2C 1987146%2C 2179047%2C 8121401%2C 9405618;Dbxref=Genbank:YP_002402958.1,GeneID:7146645;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402958.1;transl_table=11
NC_011748.1	RefSeq	gene	1965580	1966932	.	-	.	ID=gene1938;Name=chbF;Dbxref=GeneID:7145695;gbkey=Gene;gene=chbF;locus_tag=EC55989_1902
NC_011748.1	RefSeq	CDS	1965580	1966932	.	-	0	ID=cds1814;Name=YP_002402959.1;Parent=gene1938;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 20042356%2C 90185127%2C 9405618%3B Product type e : enzyme;Dbxref=Genbank:YP_002402959.1,GeneID:7145695;gbkey=CDS;product=cryptic phospho-beta-glucosidase%2C NAD%28P%29-binding;protein_id=YP_002402959.1;transl_table=11
NC_011748.1	RefSeq	gene	1967037	1967879	.	-	.	ID=gene1939;Name=chbR;Dbxref=GeneID:7145694;gbkey=Gene;gene=chbR;locus_tag=EC55989_1903
NC_011748.1	RefSeq	CDS	1967037	1967879	.	-	0	ID=cds1815;Name=YP_002402960.1;Parent=gene1939;Note=represses the celABCDF-ydjC operon involved in carbon uptake;Dbxref=Genbank:YP_002402960.1,GeneID:7145694;gbkey=CDS;product=DNA-binding transcriptional regulator ChbR;protein_id=YP_002402960.1;transl_table=11
NC_011748.1	RefSeq	gene	1967887	1968237	.	-	.	ID=gene1940;Name=chbA;Dbxref=GeneID:7145696;gbkey=Gene;gene=chbA;locus_tag=EC55989_1904
NC_011748.1	RefSeq	CDS	1967887	1968237	.	-	0	ID=cds1816;Name=YP_002402961.1;Parent=gene1940;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B involved N%2CN%27-diacetylchitobiose transport%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel for the sugar uptake;Dbxref=Genbank:YP_002402961.1,GeneID:7145696;gbkey=CDS;product=PTS system N%2CN%27-diacetylchitobiose-specific transporter subunit IIA;protein_id=YP_002402961.1;transl_table=11
NC_011748.1	RefSeq	gene	1968288	1969646	.	-	.	ID=gene1941;Name=chbC;Dbxref=GeneID:7145691;gbkey=Gene;gene=chbC;locus_tag=EC55989_1905
NC_011748.1	RefSeq	CDS	1968288	1969646	.	-	0	ID=cds1817;Name=YP_002402962.1;Parent=gene1941;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B involved in N%2CN%27-diacetylchitobiose transport%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel for the sugar uptake;Dbxref=Genbank:YP_002402962.1,GeneID:7145691;gbkey=CDS;product=PTS system N%2CN%27-diacetylchitobiose-specific transporter subunit IIC;protein_id=YP_002402962.1;transl_table=11
NC_011748.1	RefSeq	gene	1969731	1970051	.	-	.	ID=gene1942;Name=chbB;Dbxref=GeneID:7145693;gbkey=Gene;gene=chbB;locus_tag=EC55989_1906
NC_011748.1	RefSeq	CDS	1969731	1970051	.	-	0	ID=cds1818;Name=YP_002402963.1;Parent=gene1942;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B involved in N%2CN%27-diacetylchitobiose transport%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel for the sugar uptake;Dbxref=Genbank:YP_002402963.1,GeneID:7145693;gbkey=CDS;product=PTS system N%2CN%27-diacetylchitobiose-specific transporter subunit IIB;protein_id=YP_002402963.1;transl_table=11
NC_011748.1	RefSeq	gene	1970350	1970688	.	-	.	ID=gene1943;Name=osmE;Dbxref=GeneID:7145692;gbkey=Gene;gene=osmE;locus_tag=EC55989_1907
NC_011748.1	RefSeq	CDS	1970350	1970688	.	-	0	ID=cds1819;Name=YP_002402964.1;Parent=gene1943;Note=osmotically-inducible lipoprotein E%3B activator of ntr-like gene protein;Dbxref=Genbank:YP_002402964.1,GeneID:7145692;gbkey=CDS;product=DNA-binding transcriptional activator OsmE;protein_id=YP_002402964.1;transl_table=11
NC_011748.1	RefSeq	gene	1970890	1971717	.	+	.	ID=gene1944;Name=nadE;Dbxref=GeneID:7147083;gbkey=Gene;gene=nadE;locus_tag=EC55989_1908
NC_011748.1	RefSeq	CDS	1970890	1971717	.	+	0	ID=cds1820;Name=YP_002402965.1;Parent=gene1944;Note=catalyzes the formation of nicotinamide adenine dinucleotide %28NAD%29 from nicotinic acid adenine dinucleotide %28NAAD%29 using either ammonia or glutamine as the amide donor and ATP%3B ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one%3B forms homodimers;Dbxref=Genbank:YP_002402965.1,GeneID:7147083;gbkey=CDS;product=NAD synthetase;protein_id=YP_002402965.1;transl_table=11
NC_011748.1	RefSeq	gene	1971947	1972834	.	+	.	ID=gene1945;Name=ydjQ;Dbxref=GeneID:7146946;gbkey=Gene;gene=ydjQ;locus_tag=EC55989_1909
NC_011748.1	RefSeq	CDS	1971947	1972834	.	+	0	ID=cds1821;Name=YP_002402966.1;Parent=gene1945;Note=3%27 incision activity%3B acts with UvrC;Dbxref=Genbank:YP_002402966.1,GeneID:7146946;gbkey=CDS;product=nucleotide excision repair endonuclease;protein_id=YP_002402966.1;transl_table=11
NC_011748.1	RefSeq	gene	1972794	1973369	.	-	.	ID=gene1946;Name=ydjR;Dbxref=GeneID:7148513;gbkey=Gene;gene=ydjR;locus_tag=EC55989_1910
NC_011748.1	RefSeq	CDS	1972794	1973369	.	-	0	ID=cds1822;Name=YP_002402967.1;Parent=gene1946;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 21862596;Dbxref=Genbank:YP_002402967.1,GeneID:7148513;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402967.1;transl_table=11
NC_011748.1	RefSeq	gene	1973572	1974057	.	-	.	ID=gene1947;Name=spy;Dbxref=GeneID:7148514;gbkey=Gene;gene=spy;locus_tag=EC55989_1911
NC_011748.1	RefSeq	CDS	1973572	1974057	.	-	0	ID=cds1823;Name=YP_002402968.1;Parent=gene1947;Note=periplasmic protein induced by stress response via Cpx and BaeSR system%3B similar to CpxP;Dbxref=Genbank:YP_002402968.1,GeneID:7148514;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402968.1;transl_table=11
NC_011748.1	RefSeq	gene	1974387	1975355	.	-	.	ID=gene1948;Name=astE;Dbxref=GeneID:7147697;gbkey=Gene;gene=astE;locus_tag=EC55989_1912
NC_011748.1	RefSeq	CDS	1974387	1975355	.	-	0	ID=cds1824;Name=YP_002402969.1;Parent=gene1948;Note=catalyzes the formation of succinate and glutamate from N%282%29-succinylglutamate in arginine catabolism;Dbxref=Genbank:YP_002402969.1,GeneID:7147697;gbkey=CDS;product=succinylglutamate desuccinylase;protein_id=YP_002402969.1;transl_table=11
NC_011748.1	RefSeq	gene	1975348	1976691	.	-	.	ID=gene1949;Name=astB;Dbxref=GeneID:7145579;gbkey=Gene;gene=astB;locus_tag=EC55989_1913
NC_011748.1	RefSeq	CDS	1975348	1976691	.	-	0	ID=cds1825;Name=YP_002402970.1;Parent=gene1949;Note=catalyzes the hydrolysis of 2-N-succinylarginine into 2-N-succinylornithine%2C ammonia and carbon dioxide in arginine degradation;Dbxref=Genbank:YP_002402970.1,GeneID:7145579;gbkey=CDS;product=succinylarginine dihydrolase;protein_id=YP_002402970.1;transl_table=11
NC_011748.1	RefSeq	gene	1976688	1978166	.	-	.	ID=gene1950;Name=astD;Dbxref=GeneID:7145576;gbkey=Gene;gene=astD;locus_tag=EC55989_1914
NC_011748.1	RefSeq	CDS	1976688	1978166	.	-	0	ID=cds1826;Name=YP_002402971.1;Parent=gene1950;Note=a high throughput screen identified this enzyme as an aldehyde dehydrogenase with broad substrate specificity%3B converts succinylglutamate semialdehyde and NAD to succinylglutamate and NADH;Dbxref=Genbank:YP_002402971.1,GeneID:7145576;gbkey=CDS;product=succinylglutamic semialdehyde dehydrogenase;protein_id=YP_002402971.1;transl_table=11
NC_011748.1	RefSeq	gene	1978163	1979197	.	-	.	ID=gene1951;Name=astA;Dbxref=GeneID:7145578;gbkey=Gene;gene=astA;locus_tag=EC55989_1915
NC_011748.1	RefSeq	CDS	1978163	1979197	.	-	0	ID=cds1827;Name=YP_002402972.1;Parent=gene1951;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 14675764%2C 98361920%3B Product type e : enzyme;Dbxref=Genbank:YP_002402972.1,GeneID:7145578;gbkey=CDS;product=arginine succinyltransferase;protein_id=YP_002402972.1;transl_table=11
NC_011748.1	RefSeq	gene	1979194	1980414	.	-	.	ID=gene1952;Name=astC;Dbxref=GeneID:7145575;gbkey=Gene;gene=astC;locus_tag=EC55989_1916
NC_011748.1	RefSeq	CDS	1979194	1980414	.	-	0	ID=cds1828;Name=YP_002402973.1;Parent=gene1952;Note=catalyzes the transamination of 2-N-succinylornithine and alpha-ketoglutarate into 2-N-succinylglutamate semialdehyde and glutamate%3B also functions as the catabolic acetylornithine aminotransferase catalyzing the formation of 2-N-acetylglutamate semialdehyde and glutamate from 2-N-acetylornithine and alpha-ketoglutarate;Dbxref=Genbank:YP_002402973.1,GeneID:7145575;gbkey=CDS;product=bifunctional succinylornithine transaminase%2Facetylornithine transaminase;protein_id=YP_002402973.1;transl_table=11
NC_011748.1	RefSeq	gene	1980860	1981666	.	+	.	ID=gene1953;Name=xthA;Dbxref=GeneID:7145577;gbkey=Gene;gene=xthA;locus_tag=EC55989_1917
NC_011748.1	RefSeq	CDS	1980860	1981666	.	+	0	ID=cds1829;Name=YP_002402974.1;Parent=gene1953;Note=removes the damaged DNA at cytosines and guanines by cleaving on the 3%27 side of the AP site by a beta-elimination reaction;Dbxref=Genbank:YP_002402974.1,GeneID:7145577;gbkey=CDS;product=exonuclease III;protein_id=YP_002402974.1;transl_table=11
NC_011748.1	RefSeq	gene	1981833	1982543	.	+	.	ID=gene1954;Name=ydjX;Dbxref=GeneID:7147994;gbkey=Gene;gene=ydjX;locus_tag=EC55989_1918
NC_011748.1	RefSeq	CDS	1981833	1982543	.	+	0	ID=cds1830;Name=YP_002402975.1;Parent=gene1954;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002402975.1,GeneID:7147994;gbkey=CDS;product=inner membrane protein;protein_id=YP_002402975.1;transl_table=11
NC_011748.1	RefSeq	gene	1982548	1983225	.	+	.	ID=gene1955;Name=ydjY;Dbxref=GeneID:7148515;gbkey=Gene;gene=ydjY;locus_tag=EC55989_1919
NC_011748.1	RefSeq	CDS	1982548	1983225	.	+	0	ID=cds1831;Name=YP_002402976.1;Parent=gene1955;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402976.1,GeneID:7148515;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402976.1;transl_table=11
NC_011748.1	RefSeq	gene	1983239	1983946	.	+	.	ID=gene1956;Name=ydjZ;Dbxref=GeneID:7148516;gbkey=Gene;gene=ydjZ;locus_tag=EC55989_1920
NC_011748.1	RefSeq	CDS	1983239	1983946	.	+	0	ID=cds1832;Name=YP_002402977.1;Parent=gene1956;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002402977.1,GeneID:7148516;gbkey=CDS;product=inner membrane protein;protein_id=YP_002402977.1;transl_table=11
NC_011748.1	RefSeq	gene	1983946	1984494	.	+	.	ID=gene1957;Name=ynjA;Dbxref=GeneID:7148517;gbkey=Gene;gene=ynjA;locus_tag=EC55989_1921
NC_011748.1	RefSeq	CDS	1983946	1984494	.	+	0	ID=cds1833;Name=YP_002402978.1;Parent=gene1957;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402978.1,GeneID:7148517;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402978.1;transl_table=11
NC_011748.1	RefSeq	gene	1984504	1985670	.	+	.	ID=gene1958;Name=ynjB;Dbxref=GeneID:7149327;gbkey=Gene;gene=ynjB;locus_tag=EC55989_1922
NC_011748.1	RefSeq	CDS	1984504	1985670	.	+	0	ID=cds1834;Name=YP_002402979.1;Parent=gene1958;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402979.1,GeneID:7149327;gbkey=CDS;product=ABC transporter substrate-binding protein;protein_id=YP_002402979.1;transl_table=11
NC_011748.1	RefSeq	gene	1985688	1987178	.	+	.	ID=gene1959;Name=ynjC;Dbxref=GeneID:7149328;gbkey=Gene;gene=ynjC;locus_tag=EC55989_1923
NC_011748.1	RefSeq	CDS	1985688	1987178	.	+	0	ID=cds1835;Name=YP_002402980.1;Parent=gene1959;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002402980.1,GeneID:7149328;gbkey=CDS;product=fused transporter subunits of ABC superfamily: membrane components;protein_id=YP_002402980.1;transl_table=11
NC_011748.1	RefSeq	gene	1987178	1987831	.	+	.	ID=gene1960;Name=ynjD;Dbxref=GeneID:7149329;gbkey=Gene;gene=ynjD;locus_tag=EC55989_1924
NC_011748.1	RefSeq	CDS	1987178	1987831	.	+	0	ID=cds1836;Name=YP_002402981.1;Parent=gene1960;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002402981.1,GeneID:7149329;gbkey=CDS;product=sulfate%2Fthiosulfate transporter subunit: ATP-binding component of ABC superfamily transporter;protein_id=YP_002402981.1;transl_table=11
NC_011748.1	RefSeq	gene	1987898	1989205	.	+	.	ID=gene1961;Name=ynjE;Dbxref=GeneID:7149330;gbkey=Gene;gene=ynjE;locus_tag=EC55989_1925
NC_011748.1	RefSeq	CDS	1987898	1989205	.	+	0	ID=cds1837;Name=YP_002402982.1;Parent=gene1961;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002402982.1,GeneID:7149330;gbkey=CDS;product=thiosulfate sulfur transferase %2F thiosulfate binding protein;protein_id=YP_002402982.1;transl_table=11
NC_011748.1	RefSeq	gene	1989214	1989834	.	-	.	ID=gene1962;Name=ynjF;Dbxref=GeneID:7149331;gbkey=Gene;gene=ynjF;locus_tag=EC55989_1926
NC_011748.1	RefSeq	CDS	1989214	1989834	.	-	0	ID=cds1838;Name=YP_002402983.1;Parent=gene1962;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type m : membrane component;Dbxref=Genbank:YP_002402983.1,GeneID:7149331;gbkey=CDS;product=phosphatidyl transferase%2C inner membrane protein;protein_id=YP_002402983.1;transl_table=11
NC_011748.1	RefSeq	gene	1989921	1990328	.	+	.	ID=gene1963;Name=nudG;Dbxref=GeneID:7149332;gbkey=Gene;gene=nudG;locus_tag=EC55989_1927
NC_011748.1	RefSeq	CDS	1989921	1990328	.	+	0	ID=cds1839;Name=YP_002402984.1;Parent=gene1963;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 21101911%3B Product type e : enzyme;Dbxref=Genbank:YP_002402984.1,GeneID:7149332;gbkey=CDS;product=pyrimidine %28deoxy%29nucleoside triphosphate pyrophosphohydrolase;protein_id=YP_002402984.1;transl_table=11
NC_011748.1	RefSeq	gene	1990802	1992145	.	+	.	ID=gene1964;Name=gdhA;Dbxref=GeneID:7147041;gbkey=Gene;gene=gdhA;locus_tag=EC55989_1928
NC_011748.1	RefSeq	CDS	1990802	1992145	.	+	0	ID=cds1840;Name=YP_002402985.1;Parent=gene1964;Note=converts 2-oxoglutarate to glutamate%3B in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction%3B uses NADPH%3B forms a homohexamer;Dbxref=Genbank:YP_002402985.1,GeneID:7147041;gbkey=CDS;product=glutamate dehydrogenase;protein_id=YP_002402985.1;transl_table=11
NC_011748.1	RefSeq	gene	1992262	1993302	.	-	.	ID=gene1965;Name=ynjI;Dbxref=GeneID:7146280;gbkey=Gene;gene=ynjI;locus_tag=EC55989_1929
NC_011748.1	RefSeq	CDS	1992262	1993302	.	-	0	ID=cds1841;Name=YP_002402986.1;Parent=gene1965;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002402986.1,GeneID:7146280;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402986.1;transl_table=11
NC_011748.1	RefSeq	gene	1993430	1995391	.	-	.	ID=gene1966;Name=topB;Dbxref=GeneID:7149333;gbkey=Gene;gene=topB;locus_tag=EC55989_1930
NC_011748.1	RefSeq	CDS	1993430	1995391	.	-	0	ID=cds1842;Name=YP_002402987.1;Parent=gene1966;Note=decatenates replicating daughter chromosomes;Dbxref=Genbank:YP_002402987.1,GeneID:7149333;gbkey=CDS;product=DNA topoisomerase III;protein_id=YP_002402987.1;transl_table=11
NC_011748.1	RefSeq	gene	1995396	1996439	.	-	.	ID=gene1967;Name=selD;Dbxref=GeneID:7147819;gbkey=Gene;gene=selD;locus_tag=EC55989_1931
NC_011748.1	RefSeq	CDS	1995396	1996439	.	-	0	ID=cds1843;Name=YP_002402988.1;Parent=gene1967;Note=catalyzes the formation of selenophosphate from selenide and ATP;Dbxref=Genbank:YP_002402988.1,GeneID:7147819;gbkey=CDS;product=selenophosphate synthetase;protein_id=YP_002402988.1;transl_table=11
NC_011748.1	RefSeq	gene	1996381	1996530	.	-	.	ID=gene1968;Name=EC55989_1932;Dbxref=GeneID:7147630;gbkey=Gene;locus_tag=EC55989_1932
NC_011748.1	RefSeq	CDS	1996381	1996530	.	-	0	ID=cds1844;Name=YP_002402989.1;Parent=gene1968;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402989.1,GeneID:7147630;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402989.1;transl_table=11
NC_011748.1	RefSeq	gene	1996556	1997107	.	-	.	ID=gene1969;Name=ydjA;Dbxref=GeneID:7144672;gbkey=Gene;gene=ydjA;locus_tag=EC55989_1933
NC_011748.1	RefSeq	CDS	1996556	1997107	.	-	0	ID=cds1845;Name=YP_002402990.1;Parent=gene1969;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002402990.1,GeneID:7144672;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402990.1;transl_table=11
NC_011748.1	RefSeq	gene	1997161	1997325	.	+	.	ID=gene1970;Name=EC55989_1934;Dbxref=GeneID:7148500;gbkey=Gene;locus_tag=EC55989_1934
NC_011748.1	RefSeq	CDS	1997161	1997325	.	+	0	ID=cds1846;Name=YP_002402991.1;Parent=gene1970;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002402991.1,GeneID:7148500;gbkey=CDS;product=hypothetical protein;protein_id=YP_002402991.1;transl_table=11
NC_011748.1	RefSeq	gene	1997268	1999124	.	+	.	ID=gene1971;Name=sppA;Dbxref=GeneID:7144673;gbkey=Gene;gene=sppA;locus_tag=EC55989_1935
NC_011748.1	RefSeq	CDS	1997268	1999124	.	+	0	ID=cds1847;Name=YP_002402992.1;Parent=gene1971;Note=SppA%3B catalyzes the degradation of cleaved signal peptides%3B essential to maintain secretion of mature proteins across the membrane;Dbxref=Genbank:YP_002402992.1,GeneID:7144673;gbkey=CDS;product=protease 4;protein_id=YP_002402992.1;transl_table=11
NC_011748.1	RefSeq	gene	1999291	2000307	.	+	.	ID=gene1972;Name=ansA;Dbxref=GeneID:7147694;gbkey=Gene;gene=ansA;locus_tag=EC55989_1936
NC_011748.1	RefSeq	CDS	1999291	2000307	.	+	0	ID=cds1848;Name=YP_002402993.1;Parent=gene1972;Note=converts asparagine to aspartate and ammonia;Dbxref=Genbank:YP_002402993.1,GeneID:7147694;gbkey=CDS;product=asparaginase;protein_id=YP_002402993.1;transl_table=11
NC_011748.1	RefSeq	gene	2000318	2000959	.	+	.	ID=gene1973;Name=pncA;Dbxref=GeneID:7145502;gbkey=Gene;gene=pncA;locus_tag=EC55989_1937
NC_011748.1	RefSeq	CDS	2000318	2000959	.	+	0	ID=cds1849;Name=YP_002402994.1;Parent=gene1973;Note=catalyzes the formation of nicotinate from nicotinamide in NAD biosynthesis and the formation of pyrazinoate from pyrazinamide;Dbxref=Genbank:YP_002402994.1,GeneID:7145502;gbkey=CDS;product=nicotinamidase%2Fpyrazinamidase;protein_id=YP_002402994.1;transl_table=11
NC_011748.1	RefSeq	gene	2001052	2002410	.	-	.	ID=gene1974;Name=ydjE;Dbxref=GeneID:7147201;gbkey=Gene;gene=ydjE;locus_tag=EC55989_1938
NC_011748.1	RefSeq	CDS	2001052	2002410	.	-	0	ID=cds1850;Name=YP_002402995.1;Parent=gene1974;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002402995.1,GeneID:7147201;gbkey=CDS;product=transporter%3B MFS superfamily;protein_id=YP_002402995.1;transl_table=11
NC_011748.1	RefSeq	gene	2002527	2003285	.	-	.	ID=gene1975;Name=ydjF;Dbxref=GeneID:7148501;gbkey=Gene;gene=ydjF;locus_tag=EC55989_1939
NC_011748.1	RefSeq	CDS	2002527	2003285	.	-	0	ID=cds1851;Name=YP_002402996.1;Parent=gene1975;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pr :  regulator;Dbxref=Genbank:YP_002402996.1,GeneID:7148501;gbkey=CDS;product=DNA-binding transcriptional regulator;protein_id=YP_002402996.1;transl_table=11
NC_011748.1	RefSeq	gene	2003422	2004402	.	-	.	ID=gene1976;Name=ydjG;Dbxref=GeneID:7148502;gbkey=Gene;gene=ydjG;locus_tag=EC55989_1940
NC_011748.1	RefSeq	CDS	2003422	2004402	.	-	0	ID=cds1852;Name=YP_002402997.1;Parent=gene1976;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002402997.1,GeneID:7148502;gbkey=CDS;product=oxidoreductase;protein_id=YP_002402997.1;transl_table=11
NC_011748.1	RefSeq	gene	2004412	2005359	.	-	.	ID=gene1977;Name=ydjH;Dbxref=GeneID:7148503;gbkey=Gene;gene=ydjH;locus_tag=EC55989_1941
NC_011748.1	RefSeq	CDS	2004412	2005359	.	-	0	ID=cds1853;Name=YP_002402998.1;Parent=gene1977;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002402998.1,GeneID:7148503;gbkey=CDS;product=sugar kinase;protein_id=YP_002402998.1;transl_table=11
NC_011748.1	RefSeq	gene	2005364	2006200	.	-	.	ID=gene1978;Name=ydjI;Dbxref=GeneID:7148504;gbkey=Gene;gene=ydjI;locus_tag=EC55989_1942
NC_011748.1	RefSeq	CDS	2005364	2006200	.	-	0	ID=cds1854;Name=YP_002402999.1;Parent=gene1978;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002402999.1,GeneID:7148504;gbkey=CDS;product=aldolase;protein_id=YP_002402999.1;transl_table=11
NC_011748.1	RefSeq	gene	2006221	2007198	.	-	.	ID=gene1979;Name=ydjJ;Dbxref=GeneID:7148505;gbkey=Gene;gene=ydjJ;locus_tag=EC55989_1943
NC_011748.1	RefSeq	CDS	2006221	2007198	.	-	0	ID=cds1855;Name=YP_002403000.1;Parent=gene1979;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 12897001%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002403000.1,GeneID:7148505;gbkey=CDS;product=iditol dehydrogenase;protein_id=YP_002403000.1;transl_table=11
NC_011748.1	RefSeq	gene	2007280	2008659	.	-	.	ID=gene1980;Name=ydjK;Dbxref=GeneID:7148506;gbkey=Gene;gene=ydjK;locus_tag=EC55989_1944
NC_011748.1	RefSeq	CDS	2007280	2008659	.	-	0	ID=cds1856;Name=YP_002403001.1;Parent=gene1980;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002403001.1,GeneID:7148506;gbkey=CDS;product=transporter%3B MFS superfamily;protein_id=YP_002403001.1;transl_table=11
NC_011748.1	RefSeq	gene	2008686	2009762	.	-	.	ID=gene1981;Name=ydjL;Dbxref=GeneID:7148507;gbkey=Gene;gene=ydjL;locus_tag=EC55989_1945
NC_011748.1	RefSeq	CDS	2008686	2009762	.	-	0	ID=cds1857;Name=YP_002403002.1;Parent=gene1981;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002403002.1,GeneID:7148507;gbkey=CDS;product=oxidoreductase%2C Zn-dependent and NAD%28P%29-binding;protein_id=YP_002403002.1;transl_table=11
NC_011748.1	RefSeq	gene	2010132	2010404	.	-	.	ID=gene1982;Name=yeaC;Dbxref=GeneID:7148508;gbkey=Gene;gene=yeaC;locus_tag=EC55989_1946
NC_011748.1	RefSeq	CDS	2010132	2010404	.	-	0	ID=cds1858;Name=YP_002403003.1;Parent=gene1982;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403003.1,GeneID:7148508;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403003.1;transl_table=11
NC_011748.1	RefSeq	gene	2010446	2010859	.	-	.	ID=gene1983;Name=msrB;Dbxref=GeneID:7148519;gbkey=Gene;gene=msrB;locus_tag=EC55989_1947
NC_011748.1	RefSeq	CDS	2010446	2010859	.	-	0	ID=cds1859;Name=YP_002403004.1;Parent=gene1983;Note=this stereospecific enzymes reduces the R isomer of methionine sulfoxide while MsrA reduces the S form%3B provides protection against oxidative stress;Dbxref=Genbank:YP_002403004.1,GeneID:7148519;gbkey=CDS;product=methionine sulfoxide reductase B;protein_id=YP_002403004.1;transl_table=11
NC_011748.1	RefSeq	gene	2011201	2012196	.	+	.	ID=gene1984;Name=gapA;Dbxref=GeneID:7146911;gbkey=Gene;gene=gapA;locus_tag=EC55989_1948
NC_011748.1	RefSeq	CDS	2011201	2012196	.	+	0	ID=cds1860;Name=YP_002403005.1;Parent=gene1984;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 775311%2C 94131963%2C 98361923%2C 1862091%2C 2124629%2C 2990926%2C 7896119%2C 8636984%2C 9298646%3B Product type e : enzyme;Dbxref=Genbank:YP_002403005.1,GeneID:7146911;gbkey=CDS;product=glyceraldehyde-3-phosphate dehydrogenase;protein_id=YP_002403005.1;transl_table=11
NC_011748.1	RefSeq	gene	2012280	2013164	.	+	.	ID=gene1985;Name=yeaD;Dbxref=GeneID:7146256;gbkey=Gene;gene=yeaD;locus_tag=EC55989_1949
NC_011748.1	RefSeq	CDS	2012280	2013164	.	+	0	ID=cds1861;Name=YP_002403006.1;Parent=gene1985;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403006.1,GeneID:7146256;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403006.1;transl_table=11
NC_011748.1	RefSeq	gene	2013215	2014069	.	-	.	ID=gene1986;Name=yeaE;Dbxref=GeneID:7148520;gbkey=Gene;gene=yeaE;locus_tag=EC55989_1950
NC_011748.1	RefSeq	CDS	2013215	2014069	.	-	0	ID=cds1862;Name=YP_002403007.1;Parent=gene1986;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002403007.1,GeneID:7148520;gbkey=CDS;product=oxidoreductase;protein_id=YP_002403007.1;transl_table=11
NC_011748.1	RefSeq	gene	2014159	2014905	.	-	.	ID=gene1987;Name=mipA;Dbxref=GeneID:7148521;gbkey=Gene;gene=mipA;locus_tag=EC55989_1951
NC_011748.1	RefSeq	CDS	2014159	2014905	.	-	0	ID=cds1863;Name=YP_002403008.1;Parent=gene1987;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 10037771%2C 20267815%3B Product type f : factor;Dbxref=Genbank:YP_002403008.1,GeneID:7148521;gbkey=CDS;product=scaffolding protein for murein synthesizing machinery;protein_id=YP_002403008.1;transl_table=11
NC_011748.1	RefSeq	gene	2015341	2017275	.	+	.	ID=gene1988;Name=yeaG;Dbxref=GeneID:7146861;gbkey=Gene;gene=yeaG;locus_tag=EC55989_1952
NC_011748.1	RefSeq	CDS	2015341	2017275	.	+	0	ID=cds1864;Name=YP_002403009.1;Parent=gene1988;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403009.1,GeneID:7146861;gbkey=CDS;product=nucleoside triphosphate hydrolase domain;protein_id=YP_002403009.1;transl_table=11
NC_011748.1	RefSeq	gene	2017388	2018671	.	+	.	ID=gene1989;Name=yeaH;Dbxref=GeneID:7148522;gbkey=Gene;gene=yeaH;locus_tag=EC55989_1953
NC_011748.1	RefSeq	CDS	2017388	2018671	.	+	0	ID=cds1865;Name=YP_002403010.1;Parent=gene1989;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403010.1,GeneID:7148522;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403010.1;transl_table=11
NC_011748.1	RefSeq	gene	2018818	2020293	.	+	.	ID=gene1990;Name=yeaI;Dbxref=GeneID:7148523;gbkey=Gene;gene=yeaI;locus_tag=EC55989_1954
NC_011748.1	RefSeq	CDS	2018818	2020293	.	+	0	ID=cds1866;Name=YP_002403011.1;Parent=gene1990;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002403011.1,GeneID:7148523;gbkey=CDS;product=diguanylate cyclase;protein_id=YP_002403011.1;transl_table=11
NC_011748.1	RefSeq	gene	2020474	2021964	.	+	.	ID=gene1991;Name=yeaJ;Dbxref=GeneID:7148524;gbkey=Gene;gene=yeaJ;locus_tag=EC55989_1955
NC_011748.1	RefSeq	CDS	2020474	2021964	.	+	0	ID=cds1867;Name=YP_002403012.1;Parent=gene1991;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002403012.1,GeneID:7148524;gbkey=CDS;product=diguanylate cyclase;protein_id=YP_002403012.1;transl_table=11
NC_011748.1	RefSeq	gene	2022007	2022510	.	+	.	ID=gene1992;Name=yeaK;Dbxref=GeneID:7148525;gbkey=Gene;gene=yeaK;locus_tag=EC55989_1956
NC_011748.1	RefSeq	CDS	2022007	2022510	.	+	0	ID=cds1868;Name=YP_002403013.1;Parent=gene1992;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403013.1,GeneID:7148525;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403013.1;transl_table=11
NC_011748.1	RefSeq	gene	2022511	2022663	.	-	.	ID=gene1993;Name=EC55989_1957;Dbxref=GeneID:7148526;gbkey=Gene;locus_tag=EC55989_1957
NC_011748.1	RefSeq	CDS	2022511	2022663	.	-	0	ID=cds1869;Name=YP_002403014.1;Parent=gene1993;Note=Evidence 6 : Doubtful CDS;Dbxref=Genbank:YP_002403014.1,GeneID:7148526;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403014.1;transl_table=11
NC_011748.1	RefSeq	gene	2022785	2023231	.	+	.	ID=gene1994;Name=yeaL;Dbxref=GeneID:7144674;gbkey=Gene;gene=yeaL;locus_tag=EC55989_1958
NC_011748.1	RefSeq	CDS	2022785	2023231	.	+	0	ID=cds1870;Name=YP_002403015.1;Parent=gene1994;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002403015.1,GeneID:7144674;gbkey=CDS;product=inner membrane protein;protein_id=YP_002403015.1;transl_table=11
NC_011748.1	RefSeq	gene	2023188	2024009	.	-	.	ID=gene1995;Name=yeaM;Dbxref=GeneID:7148527;gbkey=Gene;gene=yeaM;locus_tag=EC55989_1959
NC_011748.1	RefSeq	CDS	2023188	2024009	.	-	0	ID=cds1871;Name=YP_002403016.1;Parent=gene1995;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pr :  regulator;Dbxref=Genbank:YP_002403016.1,GeneID:7148527;gbkey=CDS;product=DNA-binding transcriptional regulator;protein_id=YP_002403016.1;transl_table=11
NC_011748.1	RefSeq	gene	2024106	2025287	.	+	.	ID=gene1996;Name=yeaN;Dbxref=GeneID:7148528;gbkey=Gene;gene=yeaN;locus_tag=EC55989_1961
NC_011748.1	RefSeq	CDS	2024106	2025287	.	+	0	ID=cds1872;Name=YP_002403017.1;Parent=gene1996;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002403017.1,GeneID:7148528;gbkey=CDS;product=transporter%3B MFS superfamily;protein_id=YP_002403017.1;transl_table=11
NC_011748.1	RefSeq	gene	2025342	2025689	.	+	.	ID=gene1997;Name=yeaO;Dbxref=GeneID:7148529;gbkey=Gene;gene=yeaO;locus_tag=EC55989_1962
NC_011748.1	RefSeq	CDS	2025342	2025689	.	+	0	ID=cds1873;Name=YP_002403018.1;Parent=gene1997;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403018.1,GeneID:7148529;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403018.1;transl_table=11
NC_011748.1	RefSeq	gene	2025711	2025965	.	-	.	ID=gene1998;Name=yoaF;Dbxref=GeneID:7148530;gbkey=Gene;gene=yoaF;locus_tag=EC55989_1963
NC_011748.1	RefSeq	CDS	2025711	2025965	.	-	0	ID=cds1874;Name=YP_002403019.1;Parent=gene1998;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002403019.1,GeneID:7148530;gbkey=CDS;product=outer membrane protein;protein_id=YP_002403019.1;transl_table=11
NC_011748.1	RefSeq	gene	2026148	2027173	.	+	.	ID=gene1999;Name=yeaP;Dbxref=GeneID:7149338;gbkey=Gene;gene=yeaP;locus_tag=EC55989_1964
NC_011748.1	RefSeq	CDS	2026148	2027173	.	+	0	ID=cds1875;Name=YP_002403020.1;Parent=gene1999;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002403020.1,GeneID:7149338;gbkey=CDS;product=diguanylate cyclase;protein_id=YP_002403020.1;transl_table=11
NC_011748.1	RefSeq	gene	2027440	2027688	.	-	.	ID=gene2000;Name=yeaQ;Dbxref=GeneID:7148531;gbkey=Gene;gene=yeaQ;locus_tag=EC55989_1965
NC_011748.1	RefSeq	CDS	2027440	2027688	.	-	0	ID=cds1876;Name=YP_002403021.1;Parent=gene2000;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002403021.1,GeneID:7148531;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403021.1;transl_table=11
NC_011748.1	RefSeq	gene	2027700	2027885	.	-	.	ID=gene2001;Name=EC55989_1966;Dbxref=GeneID:7148532;gbkey=Gene;locus_tag=EC55989_1966
NC_011748.1	RefSeq	CDS	2027700	2027885	.	-	0	ID=cds1877;Name=YP_002403022.1;Parent=gene2001;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403022.1,GeneID:7148532;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403022.1;transl_table=11
NC_011748.1	RefSeq	gene	2027915	2029123	.	-	.	ID=gene2002;Name=ydcM;Dbxref=GeneID:7144675;gbkey=Gene;gene=ydcM;locus_tag=EC55989_1967
NC_011748.1	RefSeq	CDS	2027915	2029123	.	-	0	ID=cds1878;Name=YP_002403023.1;Parent=gene2002;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002403023.1,GeneID:7144675;gbkey=CDS;product=transposase;protein_id=YP_002403023.1;transl_table=11
NC_011748.1	RefSeq	gene	2029101	2029247	.	-	.	ID=gene2003;Name=EC55989_1968;Dbxref=GeneID:7148392;gbkey=Gene;locus_tag=EC55989_1968
NC_011748.1	RefSeq	CDS	2029101	2029247	.	-	0	ID=cds1879;Name=YP_002403024.1;Parent=gene2003;Note=Evidence 6 : Doubtful CDS;Dbxref=Genbank:YP_002403024.1,GeneID:7148392;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403024.1;transl_table=11
NC_011748.1	RefSeq	gene	2029578	2029766	.	-	.	ID=gene2004;Name=EC55989_1969;Dbxref=GeneID:7144676;gbkey=Gene;locus_tag=EC55989_1969
NC_011748.1	RefSeq	CDS	2029578	2029766	.	-	0	ID=cds1880;Name=YP_002403025.1;Parent=gene2004;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403025.1,GeneID:7144676;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403025.1;transl_table=11
NC_011748.1	RefSeq	gene	2029770	2030129	.	-	.	ID=gene2005;Name=yeaR;Dbxref=GeneID:7144677;gbkey=Gene;gene=yeaR;locus_tag=EC55989_1970
NC_011748.1	RefSeq	CDS	2029770	2030129	.	-	0	ID=cds1881;Name=YP_002403026.1;Parent=gene2005;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403026.1,GeneID:7144677;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403026.1;transl_table=11
NC_011748.1	RefSeq	gene	2030302	2030940	.	-	.	ID=gene2006;Name=yeaS;Dbxref=GeneID:7148533;gbkey=Gene;gene=yeaS;locus_tag=EC55989_1971
NC_011748.1	RefSeq	CDS	2030302	2030940	.	-	0	ID=cds1882;Name=YP_002403027.1;Parent=gene2006;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002403027.1,GeneID:7148533;gbkey=CDS;product=leucine export protein LeuE;protein_id=YP_002403027.1;transl_table=11
NC_011748.1	RefSeq	gene	2031067	2031990	.	-	.	ID=gene2007;Name=yeaT;Dbxref=GeneID:7148534;gbkey=Gene;gene=yeaT;locus_tag=EC55989_1972
NC_011748.1	RefSeq	CDS	2031067	2031990	.	-	0	ID=cds1883;Name=YP_002403028.1;Parent=gene2007;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pr :  regulator;Dbxref=Genbank:YP_002403028.1,GeneID:7148534;gbkey=CDS;product=DNA-binding transcriptional regulator;protein_id=YP_002403028.1;transl_table=11
NC_011748.1	RefSeq	gene	2032093	2033178	.	+	.	ID=gene2008;Name=yeaU;Dbxref=GeneID:7148535;gbkey=Gene;gene=yeaU;locus_tag=EC55989_1973
NC_011748.1	RefSeq	CDS	2032093	2033178	.	+	0	ID=cds1884;Name=YP_002403029.1;Parent=gene2008;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002403029.1,GeneID:7148535;gbkey=CDS;product=tartrate dehydrogenase;protein_id=YP_002403029.1;transl_table=11
NC_011748.1	RefSeq	gene	2033594	2035039	.	+	.	ID=gene2009;Name=yeaV;Dbxref=GeneID:7148536;gbkey=Gene;gene=yeaV;locus_tag=EC55989_1974
NC_011748.1	RefSeq	CDS	2033594	2035039	.	+	0	ID=cds1885;Name=YP_002403030.1;Parent=gene2009;Note=member of the betaine%2C carnitine%2C choline transporter %28BCCT%29 family%3B unknown function;Dbxref=Genbank:YP_002403030.1,GeneID:7148536;gbkey=CDS;product=transporter;protein_id=YP_002403030.1;transl_table=11
NC_011748.1	RefSeq	gene	2035071	2036195	.	+	.	ID=gene2010;Name=yeaW;Dbxref=GeneID:7148537;gbkey=Gene;gene=yeaW;locus_tag=EC55989_1975
NC_011748.1	RefSeq	CDS	2035071	2036195	.	+	0	ID=cds1886;Name=YP_002403031.1;Parent=gene2010;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pc :  carrier;Dbxref=Genbank:YP_002403031.1,GeneID:7148537;gbkey=CDS;product=2Fe-2S cluster-containing dioxygenase subunit;protein_id=YP_002403031.1;transl_table=11
NC_011748.1	RefSeq	gene	2036251	2037216	.	+	.	ID=gene2011;Name=yeaX;Dbxref=GeneID:7148538;gbkey=Gene;gene=yeaX;locus_tag=EC55989_1976
NC_011748.1	RefSeq	CDS	2036251	2037216	.	+	0	ID=cds1887;Name=YP_002403032.1;Parent=gene2011;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002403032.1,GeneID:7148538;gbkey=CDS;product=dioxygenase subunit;protein_id=YP_002403032.1;transl_table=11
NC_011748.1	RefSeq	gene	2037270	2038397	.	-	.	ID=gene2012;Name=rnd;Dbxref=GeneID:7148539;gbkey=Gene;gene=rnd;locus_tag=EC55989_1977
NC_011748.1	RefSeq	CDS	2037270	2038397	.	-	0	ID=cds1888;Name=YP_002403033.1;Parent=gene2012;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 88289400%2C 89053950%2C 93015723%2C 8107670%3B Product type e : enzyme;Dbxref=Genbank:YP_002403033.1,GeneID:7148539;gbkey=CDS;product=ribonuclease D;protein_id=YP_002403033.1;transl_table=11
NC_011748.1	RefSeq	gene	2038467	2040152	.	-	.	ID=gene2013;Name=fadD;Dbxref=GeneID:7147447;gbkey=Gene;gene=fadD;locus_tag=EC55989_1978
NC_011748.1	RefSeq	CDS	2038467	2040152	.	-	0	ID=cds1889;Name=YP_002403034.1;Parent=gene2013;Note=Activates fatty acids by binding to coenzyme A;Dbxref=Genbank:YP_002403034.1,GeneID:7147447;gbkey=CDS;product=long-chain-fatty-acid--CoA ligase;protein_id=YP_002403034.1;transl_table=11
NC_011748.1	RefSeq	gene	2040357	2040938	.	-	.	ID=gene2014;Name=yeaY;Dbxref=GeneID:7146057;gbkey=Gene;gene=yeaY;locus_tag=EC55989_1979
NC_011748.1	RefSeq	CDS	2040357	2040938	.	-	0	ID=cds1890;Name=YP_002403035.1;Parent=gene2014;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 16079137%3B Product type lp : lipoprotein;Dbxref=Genbank:YP_002403035.1,GeneID:7146057;gbkey=CDS;product=outer membrane-associated lipoprotein;protein_id=YP_002403035.1;transl_table=11
NC_011748.1	RefSeq	gene	2040978	2041673	.	-	.	ID=gene2015;Name=yeaZ;Dbxref=GeneID:7148540;gbkey=Gene;gene=yeaZ;locus_tag=EC55989_1980
NC_011748.1	RefSeq	CDS	2040978	2041673	.	-	0	ID=cds1891;Name=YP_002403036.1;Parent=gene2015;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002403036.1,GeneID:7148540;gbkey=CDS;product=peptidase;protein_id=YP_002403036.1;transl_table=11
NC_011748.1	RefSeq	gene	2041731	2043641	.	-	.	ID=gene2016;Name=yoaA;Dbxref=GeneID:7148541;gbkey=Gene;gene=yoaA;locus_tag=EC55989_1981
NC_011748.1	RefSeq	CDS	2041731	2043641	.	-	0	ID=cds1892;Name=YP_002403037.1;Parent=gene2016;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002403037.1,GeneID:7148541;gbkey=CDS;product=ATP-dependent helicase;protein_id=YP_002403037.1;transl_table=11
NC_011748.1	RefSeq	gene	2043773	2044117	.	+	.	ID=gene2017;Name=yoaB;Dbxref=GeneID:7149334;gbkey=Gene;gene=yoaB;locus_tag=EC55989_1982
NC_011748.1	RefSeq	CDS	2043773	2044117	.	+	0	ID=cds1893;Name=YP_002403038.1;Parent=gene2017;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403038.1,GeneID:7149334;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403038.1;transl_table=11
NC_011748.1	RefSeq	gene	2044480	2044839	.	+	.	ID=gene2018;Name=yoaC;Dbxref=GeneID:7149335;gbkey=Gene;gene=yoaC;locus_tag=EC55989_1983
NC_011748.1	RefSeq	CDS	2044480	2044839	.	+	0	ID=cds1894;Name=YP_002403039.1;Parent=gene2018;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403039.1,GeneID:7149335;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403039.1;transl_table=11
NC_011748.1	RefSeq	gene	2044959	2045138	.	-	.	ID=gene2019;Name=yoaH;Dbxref=GeneID:7149336;gbkey=Gene;gene=yoaH;locus_tag=EC55989_1984
NC_011748.1	RefSeq	CDS	2044959	2045138	.	-	0	ID=cds1895;Name=YP_002403040.1;Parent=gene2019;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403040.1,GeneID:7149336;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403040.1;transl_table=11
NC_011748.1	RefSeq	gene	2045212	2046573	.	+	.	ID=gene2020;Name=pabB;Dbxref=GeneID:7149339;gbkey=Gene;gene=pabB;locus_tag=EC55989_1985
NC_011748.1	RefSeq	CDS	2045212	2046573	.	+	0	ID=cds1896;Name=YP_002403041.1;Parent=gene2020;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 88025006%2C 91067712%2C 91302313%2C 96011382%2C 6330050%2C 7896119%3B Product type e : enzyme;Dbxref=Genbank:YP_002403041.1,GeneID:7149339;gbkey=CDS;product=aminodeoxychorismate synthase subunit I;protein_id=YP_002403041.1;transl_table=11
NC_011748.1	RefSeq	gene	2046577	2047155	.	+	.	ID=gene2021;Name=yeaB;Dbxref=GeneID:7147107;gbkey=Gene;gene=yeaB;locus_tag=EC55989_1986
NC_011748.1	RefSeq	CDS	2046577	2047155	.	+	0	ID=cds1897;Name=YP_002403042.1;Parent=gene2021;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 7567469%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002403042.1,GeneID:7147107;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403042.1;transl_table=11
NC_011748.1	RefSeq	gene	2047339	2048703	.	+	.	ID=gene2022;Name=sdaA;Dbxref=GeneID:7148518;gbkey=Gene;gene=sdaA;locus_tag=EC55989_1987
NC_011748.1	RefSeq	CDS	2047339	2048703	.	+	0	ID=cds1898;Name=YP_002403043.1;Parent=gene2022;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 15155761%2C 89359152%2C 91056090%2C 93170282%3B Product type e : enzyme;Dbxref=Genbank:YP_002403043.1,GeneID:7148518;gbkey=CDS;product=L-serine deaminase I;protein_id=YP_002403043.1;transl_table=11
NC_011748.1	RefSeq	gene	2048834	2050432	.	+	.	ID=gene2023;Name=adrB;Dbxref=GeneID:7147612;gbkey=Gene;gene=adrB;locus_tag=EC55989_1988
NC_011748.1	RefSeq	CDS	2048834	2050432	.	+	0	ID=cds1899;Name=YP_002403044.1;Parent=gene2023;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 16513732%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002403044.1,GeneID:7147612;gbkey=CDS;product=cyclic di-GMP phosphodiesterase;protein_id=YP_002403044.1;transl_table=11
NC_011748.1	RefSeq	gene	2050436	2051992	.	-	.	ID=gene2024;Name=yoaE;Dbxref=GeneID:7145461;gbkey=Gene;gene=yoaE;locus_tag=EC55989_1989
NC_011748.1	RefSeq	CDS	2050436	2051992	.	-	0	ID=cds1900;Name=YP_002403045.1;Parent=gene2024;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002403045.1,GeneID:7145461;gbkey=CDS;product=membrane protein fused with conserved domain;protein_id=YP_002403045.1;transl_table=11
NC_011748.1	RefSeq	gene	2052455	2053426	.	+	.	ID=gene2025;Name=manX;Dbxref=GeneID:7149337;gbkey=Gene;gene=manX;locus_tag=EC55989_1990
NC_011748.1	RefSeq	CDS	2052455	2053426	.	+	0	ID=cds1901;Name=YP_002403046.1;Parent=gene2025;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 87165962%2C 90036983%2C 8131846%2C 8676384%2C 9074635%2C 9298646%3B Product type t : transporter;Dbxref=Genbank:YP_002403046.1,GeneID:7149337;gbkey=CDS;product=fused mannose-specific PTS enzymes: IIA component %3B IIB component;protein_id=YP_002403046.1;transl_table=11
NC_011748.1	RefSeq	gene	2053489	2054289	.	+	.	ID=gene2026;Name=manY;Dbxref=GeneID:7146782;gbkey=Gene;gene=manY;locus_tag=EC55989_1991
NC_011748.1	RefSeq	CDS	2053489	2054289	.	+	0	ID=cds1902;Name=YP_002403047.1;Parent=gene2026;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 10473571%2C 87165962%2C 90036983%2C 94086520%2C 97128775%2C 7811395%2C 8774730%3B Product type t : transporter;Dbxref=Genbank:YP_002403047.1,GeneID:7146782;gbkey=CDS;product=mannose-specific enzyme IIC component of PTS;protein_id=YP_002403047.1;transl_table=11
NC_011748.1	RefSeq	gene	2054293	2055153	.	+	.	ID=gene2027;Name=manZ;Dbxref=GeneID:7146783;gbkey=Gene;gene=manZ;locus_tag=EC55989_1992
NC_011748.1	RefSeq	CDS	2054293	2055153	.	+	0	ID=cds1903;Name=YP_002403048.1;Parent=gene2027;Note=hosphoenolpyruvate-dependent sugar phosphotransferase system catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IID with IIC forms the translocation channel;Dbxref=Genbank:YP_002403048.1,GeneID:7146783;gbkey=CDS;product=PTS system mannose-specific transporter subunit IID;protein_id=YP_002403048.1;transl_table=11
NC_011748.1	RefSeq	gene	2055208	2055666	.	+	.	ID=gene2028;Name=yobD;Dbxref=GeneID:7146784;gbkey=Gene;gene=yobD;locus_tag=EC55989_1993
NC_011748.1	RefSeq	CDS	2055208	2055666	.	+	0	ID=cds1904;Name=YP_002403049.1;Parent=gene2028;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002403049.1,GeneID:7146784;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403049.1;transl_table=11
NC_011748.1	RefSeq	gene	2055853	2056098	.	+	.	ID=gene2029;Name=EC55989_1994;Dbxref=GeneID:7149342;gbkey=Gene;locus_tag=EC55989_1994
NC_011748.1	RefSeq	CDS	2055853	2056098	.	+	0	ID=cds1905;Name=YP_002403050.1;Parent=gene2029;Note=Evidence 6 : Doubtful CDS;Dbxref=Genbank:YP_002403050.1,GeneID:7149342;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403050.1;transl_table=11
NC_011748.1	RefSeq	gene	2056095	2056661	.	+	.	ID=gene2030;Name=yebN;Dbxref=GeneID:7144678;gbkey=Gene;gene=yebN;locus_tag=EC55989_1995
NC_011748.1	RefSeq	CDS	2056095	2056661	.	+	0	ID=cds1906;Name=YP_002403051.1;Parent=gene2030;Note=membrane protein YebN;Dbxref=Genbank:YP_002403051.1,GeneID:7144678;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403051.1;transl_table=11
NC_011748.1	RefSeq	gene	2056658	2057467	.	-	.	ID=gene2031;Name=rrmA;Dbxref=GeneID:7148549;gbkey=Gene;gene=rrmA;locus_tag=EC55989_1996
NC_011748.1	RefSeq	CDS	2056658	2057467	.	-	0	ID=cds1907;Name=YP_002403052.1;Parent=gene2031;Note=methylates the guanosine in position 745 of 23S rRNA%3B required for translation and cell growth;Dbxref=Genbank:YP_002403052.1,GeneID:7148549;gbkey=CDS;product=23S rRNA methyltransferase;protein_id=YP_002403052.1;transl_table=11
NC_011748.1	RefSeq	gene	2057633	2057842	.	-	.	ID=gene2032;Name=cspC;Dbxref=GeneID:7147527;gbkey=Gene;gene=cspC;locus_tag=EC55989_1997
NC_011748.1	RefSeq	CDS	2057633	2057842	.	-	0	ID=cds1908;Name=YP_002403053.1;Parent=gene2032;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 20345064%2C 21101802%2C 94293754%2C 12071744%2C 7984109%2C 8022261%2C 9298646%2C 9868784%2C 9921691%3B Product type f : factor;Dbxref=Genbank:YP_002403053.1,GeneID:7147527;gbkey=CDS;product=cold shock-like protein CspC;protein_id=YP_002403053.1;transl_table=11
NC_011748.1	RefSeq	gene	2057855	2057998	.	-	.	ID=gene2033;Name=yobF;Dbxref=GeneID:7145778;gbkey=Gene;gene=yobF;locus_tag=EC55989_1998
NC_011748.1	RefSeq	CDS	2057855	2057998	.	-	0	ID=cds1909;Name=YP_002403054.1;Parent=gene2033;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403054.1,GeneID:7145778;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403054.1;transl_table=11
NC_011748.1	RefSeq	gene	2058668	2058955	.	-	.	ID=gene2034;Name=yebO;Dbxref=GeneID:7149343;gbkey=Gene;gene=yebO;locus_tag=EC55989_1999
NC_011748.1	RefSeq	CDS	2058668	2058955	.	-	0	ID=cds1910;Name=YP_002403055.1;Parent=gene2034;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403055.1,GeneID:7149343;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403055.1;transl_table=11
NC_011748.1	RefSeq	gene	2059030	2059173	.	-	.	ID=gene2035;Name=yobG;Dbxref=GeneID:7148550;gbkey=Gene;gene=yobG;locus_tag=EC55989_2000
NC_011748.1	RefSeq	CDS	2059030	2059173	.	-	0	ID=cds1911;Name=YP_002403056.1;Parent=gene2035;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403056.1,GeneID:7148550;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403056.1;transl_table=11
NC_011748.1	RefSeq	gene	2059332	2059571	.	+	.	ID=gene2036;Name=yobH;Dbxref=GeneID:7149344;gbkey=Gene;gene=yobH;locus_tag=EC55989_2001
NC_011748.1	RefSeq	CDS	2059332	2059571	.	+	0	ID=cds1912;Name=YP_002403057.1;Parent=gene2036;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403057.1,GeneID:7149344;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403057.1;transl_table=11
NC_011748.1	RefSeq	gene	2059868	2060143	.	+	.	ID=gene2037;Name=insA;Dbxref=GeneID:7149345;gbkey=Gene;gene=insA;locus_tag=EC55989_2002
NC_011748.1	RefSeq	CDS	2059868	2060143	.	+	0	ID=cds1913;Name=YP_002403058.1;Parent=gene2037;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 9689094%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002403058.1,GeneID:7149345;gbkey=CDS;product=IS1 repressor protein InsA;protein_id=YP_002403058.1;transl_table=11
NC_011748.1	RefSeq	gene	2060062	2060565	.	+	.	ID=gene2038;Name=insB;Dbxref=GeneID:7146575;gbkey=Gene;gene=insB;locus_tag=EC55989_2003
NC_011748.1	RefSeq	CDS	2060062	2060565	.	+	0	ID=cds1914;Name=YP_002403059.1;Parent=gene2038;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 9689094%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002403059.1,GeneID:7146575;gbkey=CDS;product=IS1 transposase InsAB%27;protein_id=YP_002403059.1;transl_table=11
NC_011748.1	RefSeq	gene	2060500	2061282	.	-	.	ID=gene2039;Name=kdgR;Dbxref=GeneID:7146587;gbkey=Gene;gene=kdgR;locus_tag=EC55989_2004
NC_011748.1	RefSeq	CDS	2060500	2061282	.	-	0	ID=cds1915;Name=YP_002403060.1;Parent=gene2039;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 15659677%2C 4359651%3B Product type r : regulator;Dbxref=Genbank:YP_002403060.1,GeneID:7146587;gbkey=CDS;product=DNA-binding transcriptional repressor KdgR;protein_id=YP_002403060.1;transl_table=11
NC_011748.1	RefSeq	gene	2061459	2062832	.	+	.	ID=gene2040;Name=yebQ;Dbxref=GeneID:7146652;gbkey=Gene;gene=yebQ;locus_tag=EC55989_2005
NC_011748.1	RefSeq	CDS	2061459	2062832	.	+	0	ID=cds1916;Name=YP_002403061.1;Parent=gene2040;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002403061.1,GeneID:7146652;gbkey=CDS;product=transporter%3B MFS superfamily;protein_id=YP_002403061.1;transl_table=11
NC_011748.1	RefSeq	gene	2062878	2063759	.	-	.	ID=gene2041;Name=htpX;Dbxref=GeneID:7148551;gbkey=Gene;gene=htpX;locus_tag=EC55989_2006
NC_011748.1	RefSeq	CDS	2062878	2063759	.	-	0	ID=cds1917;Name=YP_002403062.1;Parent=gene2041;Note=metalloprotease;Dbxref=Genbank:YP_002403062.1,GeneID:7148551;gbkey=CDS;product=heat shock protein HtpX;protein_id=YP_002403062.1;transl_table=11
NC_011748.1	RefSeq	gene	2063951	2065999	.	-	.	ID=gene2042;Name=prc;Dbxref=GeneID:7146474;gbkey=Gene;gene=prc;locus_tag=EC55989_2007
NC_011748.1	RefSeq	CDS	2063951	2065999	.	-	0	ID=cds1918;Name=YP_002403063.1;Parent=gene2042;Note=Involved in the cleavage of a C-terminal peptide of 11 residues from the precursor form of penicillin-binding protein 3;Dbxref=Genbank:YP_002403063.1,GeneID:7146474;gbkey=CDS;product=carboxy-terminal protease;protein_id=YP_002403063.1;transl_table=11
NC_011748.1	RefSeq	gene	2066019	2066717	.	-	.	ID=gene2043;Name=proQ;Dbxref=GeneID:7147239;gbkey=Gene;gene=proQ;locus_tag=EC55989_2008
NC_011748.1	RefSeq	CDS	2066019	2066717	.	-	0	ID=cds1919;Name=YP_002403064.1;Parent=gene2043;Note=affects solute and DNA transport through an unknown mechanism;Dbxref=Genbank:YP_002403064.1,GeneID:7147239;gbkey=CDS;product=solute%2FDNA competence effector;protein_id=YP_002403064.1;transl_table=11
NC_011748.1	RefSeq	gene	2066814	2067365	.	-	.	ID=gene2044;Name=yebR;Dbxref=GeneID:7147256;gbkey=Gene;gene=yebR;locus_tag=EC55989_2009
NC_011748.1	RefSeq	CDS	2066814	2067365	.	-	0	ID=cds1920;Name=YP_002403065.1;Parent=gene2044;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403065.1,GeneID:7147256;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403065.1;transl_table=11
NC_011748.1	RefSeq	gene	2067441	2068724	.	+	.	ID=gene2045;Name=yebS;Dbxref=GeneID:7148552;gbkey=Gene;gene=yebS;locus_tag=EC55989_2010
NC_011748.1	RefSeq	CDS	2067441	2068724	.	+	0	ID=cds1921;Name=YP_002403066.1;Parent=gene2045;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002403066.1,GeneID:7148552;gbkey=CDS;product=inner membrane protein;protein_id=YP_002403066.1;transl_table=11
NC_011748.1	RefSeq	gene	2068693	2071326	.	+	.	ID=gene2046;Name=yebT;Dbxref=GeneID:7148553;gbkey=Gene;gene=yebT;locus_tag=EC55989_2011
NC_011748.1	RefSeq	CDS	2068693	2071326	.	+	0	ID=cds1922;Name=YP_002403067.1;Parent=gene2046;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403067.1,GeneID:7148553;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403067.1;transl_table=11
NC_011748.1	RefSeq	STS	2069999	2070284	.	+	.	ID=id143;Dbxref=UniSTS:30742,GeneID:7148553;gbkey=STS
NC_011748.1	RefSeq	gene	2071406	2072845	.	+	.	ID=gene2047;Name=yebU;Dbxref=GeneID:7148554;gbkey=Gene;gene=yebU;locus_tag=EC55989_2012
NC_011748.1	RefSeq	CDS	2071406	2072845	.	+	0	ID=cds1923;Name=YP_002403068.1;Parent=gene2047;Note=in Escherichia coli this enzyme specifically methylates C1407 of the 16S rRNA;Dbxref=Genbank:YP_002403068.1,GeneID:7148554;gbkey=CDS;product=rRNA %28cytosine-C%285%29-%29-methyltransferase RsmF;protein_id=YP_002403068.1;transl_table=11
NC_011748.1	RefSeq	gene	2072963	2073199	.	+	.	ID=gene2048;Name=yebV;Dbxref=GeneID:7148555;gbkey=Gene;gene=yebV;locus_tag=EC55989_2013
NC_011748.1	RefSeq	CDS	2072963	2073199	.	+	0	ID=cds1924;Name=YP_002403069.1;Parent=gene2048;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403069.1,GeneID:7148555;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403069.1;transl_table=11
NC_011748.1	RefSeq	gene	2073220	2073495	.	+	.	ID=gene2049;Name=yebW;Dbxref=GeneID:7148556;gbkey=Gene;gene=yebW;locus_tag=EC55989_2014
NC_011748.1	RefSeq	CDS	2073220	2073495	.	+	0	ID=cds1925;Name=YP_002403070.1;Parent=gene2049;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403070.1,GeneID:7148556;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403070.1;transl_table=11
NC_011748.1	RefSeq	gene	2073496	2074152	.	-	.	ID=gene2050;Name=pphA;Dbxref=GeneID:7148557;gbkey=Gene;gene=pphA;locus_tag=EC55989_2015
NC_011748.1	RefSeq	CDS	2073496	2074152	.	-	0	ID=cds1926;Name=YP_002403071.1;Parent=gene2050;Note=Plays a key role in signaling protein misfolding via the cpxR%2FcpxA transducing system%3B modulates the phosphorylated status of many phosphoproteins;Dbxref=Genbank:YP_002403071.1,GeneID:7148557;gbkey=CDS;product=serine%2Fthreonine protein phosphatase 1;protein_id=YP_002403071.1;transl_table=11
NC_011748.1	RefSeq	gene	2074347	2074467	.	-	.	ID=gene2051;Name=ryeB;Dbxref=GeneID:7147578;gbkey=Gene;gene=ryeB;locus_tag=EC55989_misc_RNA_40
NC_011748.1	RefSeq	transcript	2074347	2074467	.	-	.	ID=rna76;Parent=gene2051;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 11445539%3B Product type n : RNA;Dbxref=GeneID:7147578;gbkey=misc_RNA;product=RyeB
NC_011748.1	RefSeq	exon	2074347	2074467	.	-	.	ID=id144;Parent=rna76;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 11445539%3B Product type n : RNA;Dbxref=GeneID:7147578;gbkey=misc_RNA;product=RyeB
NC_011748.1	RefSeq	gene	2074377	2074463	.	-	.	ID=gene2052;Name=EC55989_2016;Dbxref=GeneID:7147579;gbkey=Gene;locus_tag=EC55989_2016;pseudo=true
NC_011748.1	RefSeq	region	2074377	2074463	.	-	.	ID=id145;Note=fragment of conserved hypothetical protein %28partial%29%3BEvidence 7 : Gene remnant;Dbxref=GeneID:7147579;gbkey=misc_feature
NC_011748.1	RefSeq	gene	2074548	2074889	.	-	.	ID=gene2053;Name=yebY;Dbxref=GeneID:7144679;gbkey=Gene;gene=yebY;locus_tag=EC55989_2017
NC_011748.1	RefSeq	CDS	2074548	2074889	.	-	0	ID=cds1927;Name=YP_002403072.1;Parent=gene2053;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403072.1,GeneID:7144679;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403072.1;transl_table=11
NC_011748.1	RefSeq	gene	2074902	2075774	.	-	.	ID=gene2054;Name=yebZ;Dbxref=GeneID:7148558;gbkey=Gene;gene=yebZ;locus_tag=EC55989_2018
NC_011748.1	RefSeq	CDS	2074902	2075774	.	-	0	ID=cds1928;Name=YP_002403073.1;Parent=gene2054;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002403073.1,GeneID:7148558;gbkey=CDS;product=inner membrane protein;protein_id=YP_002403073.1;transl_table=11
NC_011748.1	RefSeq	gene	2075778	2076152	.	-	.	ID=gene2055;Name=yobA;Dbxref=GeneID:7148559;gbkey=Gene;gene=yobA;locus_tag=EC55989_2019
NC_011748.1	RefSeq	CDS	2075778	2076152	.	-	0	ID=cds1929;Name=YP_002403074.1;Parent=gene2055;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403074.1,GeneID:7148559;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403074.1;transl_table=11
NC_011748.1	RefSeq	gene	2076291	2076521	.	+	.	ID=gene2056;Name=holE;Dbxref=GeneID:7149340;gbkey=Gene;gene=holE;locus_tag=EC55989_2020
NC_011748.1	RefSeq	CDS	2076291	2076521	.	+	0	ID=cds1930;Name=YP_002403075.1;Parent=gene2056;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 15090519%2C 92147649%2C 92156151%2C 94131961%2C 1575709%2C 8341603%2C 8505306%3B Product type e : enzyme;Dbxref=Genbank:YP_002403075.1,GeneID:7149340;gbkey=CDS;product=DNA polymerase III subunit theta;protein_id=YP_002403075.1;transl_table=11
NC_011748.1	RefSeq	gene	2076623	2077279	.	+	.	ID=gene2057;Name=yobB;Dbxref=GeneID:7146457;gbkey=Gene;gene=yobB;locus_tag=EC55989_2021
NC_011748.1	RefSeq	CDS	2076623	2077279	.	+	0	ID=cds1931;Name=YP_002403076.1;Parent=gene2057;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403076.1,GeneID:7146457;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403076.1;transl_table=11
NC_011748.1	RefSeq	gene	2077303	2077965	.	+	.	ID=gene2058;Name=exoX;Dbxref=GeneID:7149341;gbkey=Gene;gene=exoX;locus_tag=EC55989_2022
NC_011748.1	RefSeq	CDS	2077303	2077965	.	+	0	ID=cds1932;Name=YP_002403077.1;Parent=gene2058;Note=3%27-5%27 exonuclease activity on single or double-strand DNA;Dbxref=Genbank:YP_002403077.1,GeneID:7149341;gbkey=CDS;product=exodeoxyribonuclease X;protein_id=YP_002403077.1;transl_table=11
NC_011748.1	RefSeq	gene	2077962	2080022	.	-	.	ID=gene2059;Name=ptrB;Dbxref=GeneID:7146043;gbkey=Gene;gene=ptrB;locus_tag=EC55989_2023
NC_011748.1	RefSeq	CDS	2077962	2080022	.	-	0	ID=cds1933;Name=YP_002403078.1;Parent=gene2059;Note=PtrB%3B oligopeptidase that cleaves peptide bonds following arginine and lysine residues;Dbxref=Genbank:YP_002403078.1,GeneID:7146043;gbkey=CDS;product=protease 2;protein_id=YP_002403078.1;transl_table=11
NC_011748.1	RefSeq	gene	2080231	2080890	.	-	.	ID=gene2060;Name=yebE;Dbxref=GeneID:7147284;gbkey=Gene;gene=yebE;locus_tag=EC55989_2024
NC_011748.1	RefSeq	CDS	2080231	2080890	.	-	0	ID=cds1934;Name=YP_002403079.1;Parent=gene2060;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403079.1,GeneID:7147284;gbkey=CDS;product=inner membrane protein;protein_id=YP_002403079.1;transl_table=11
NC_011748.1	RefSeq	gene	2081217	2081585	.	-	.	ID=gene2061;Name=yebF;Dbxref=GeneID:7148545;gbkey=Gene;gene=yebF;locus_tag=EC55989_2025
NC_011748.1	RefSeq	CDS	2081217	2081585	.	-	0	ID=cds1935;Name=YP_002403080.1;Parent=gene2061;Note=secreted protein%3B unknown function;Dbxref=Genbank:YP_002403080.1,GeneID:7148545;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403080.1;transl_table=11
NC_011748.1	RefSeq	gene	2081640	2081930	.	-	.	ID=gene2062;Name=yebG;Dbxref=GeneID:7148546;gbkey=Gene;gene=yebG;locus_tag=EC55989_2026
NC_011748.1	RefSeq	CDS	2081640	2081930	.	-	0	ID=cds1936;Name=YP_002403081.1;Parent=gene2062;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 9368369%2C 99403401%3B Product type cp : cell process;Dbxref=Genbank:YP_002403081.1,GeneID:7148546;gbkey=CDS;product=DNA damage-inducible protein YebG;protein_id=YP_002403081.1;transl_table=11
NC_011748.1	RefSeq	gene	2082064	2083242	.	+	.	ID=gene2063;Name=purT;Dbxref=GeneID:7148547;gbkey=Gene;gene=purT;locus_tag=EC55989_2027
NC_011748.1	RefSeq	CDS	2082064	2083242	.	+	0	ID=cds1937;Name=YP_002403082.1;Parent=gene2063;Note=non-folate utilizing enzyme%2C catalyzes the production of beta-formyl glycinamide ribonucleotide from formate%2C ATP%2C and beta-GAR and a side reaction producing acetyl phosphate and ADP from acetate and ATP%3B involved in de novo purine biosynthesis;Dbxref=Genbank:YP_002403082.1,GeneID:7148547;gbkey=CDS;product=phosphoribosylglycinamide formyltransferase 2;protein_id=YP_002403082.1;transl_table=11
NC_011748.1	RefSeq	gene	2083298	2083939	.	-	.	ID=gene2064;Name=eda;Dbxref=GeneID:7147304;gbkey=Gene;gene=eda;locus_tag=EC55989_2028
NC_011748.1	RefSeq	CDS	2083298	2083939	.	-	0	ID=cds1938;Name=YP_002403083.1;Parent=gene2064;Note=catalyzes the formation of pyruvate and glyoxylate from 4-hydroxy-2-oxoglutarate%3B or pyruvate and D-glyceraldehyde 3-phosphate from 2-dehydro-3-deoxy-D-glyconate 6-phosphate;Dbxref=Genbank:YP_002403083.1,GeneID:7147304;gbkey=CDS;product=keto-hydroxyglutarate-aldolase%2Fketo-deoxy-phosphogluconate aldolase;protein_id=YP_002403083.1;transl_table=11
NC_011748.1	RefSeq	gene	2083976	2085787	.	-	.	ID=gene2065;Name=edd;Dbxref=GeneID:7145976;gbkey=Gene;gene=edd;locus_tag=EC55989_2029
NC_011748.1	RefSeq	CDS	2083976	2085787	.	-	0	ID=cds1939;Name=YP_002403084.1;Parent=gene2065;Note=catalyzes the formation of 2-dehydro-3-deoxy-6-phospho-D-gluconate from 6-phospho-D-gluconate;Dbxref=Genbank:YP_002403084.1,GeneID:7145976;gbkey=CDS;product=phosphogluconate dehydratase;protein_id=YP_002403084.1;transl_table=11
NC_011748.1	RefSeq	gene	2086022	2087497	.	-	.	ID=gene2066;Name=zwf;Dbxref=GeneID:7145977;gbkey=Gene;gene=zwf;locus_tag=EC55989_2030
NC_011748.1	RefSeq	CDS	2086022	2087497	.	-	0	ID=cds1940;Name=YP_002403085.1;Parent=gene2066;Note=catalyzes the formation of D-glucono-1%2C5-lactone 6-phosphate from D-glucose 6-phosphate;Dbxref=Genbank:YP_002403085.1,GeneID:7145977;gbkey=CDS;product=glucose-6-phosphate 1-dehydrogenase;protein_id=YP_002403085.1;transl_table=11
NC_011748.1	RefSeq	gene	2087835	2088704	.	+	.	ID=gene2067;Name=yebK;Dbxref=GeneID:7149500;gbkey=Gene;gene=yebK;locus_tag=EC55989_2032
NC_011748.1	RefSeq	CDS	2087835	2088704	.	+	0	ID=cds1941;Name=YP_002403086.1;Parent=gene2067;Note=Represses the expression of the zwf%2C eda%2C glp and gap;Dbxref=Genbank:YP_002403086.1,GeneID:7149500;gbkey=CDS;product=DNA-binding transcriptional regulator HexR;protein_id=YP_002403086.1;transl_table=11
NC_011748.1	RefSeq	gene	2088832	2090274	.	+	.	ID=gene2068;Name=pykA;Dbxref=GeneID:7148548;gbkey=Gene;gene=pykA;locus_tag=EC55989_2033
NC_011748.1	RefSeq	CDS	2088832	2090274	.	+	0	ID=cds1942;Name=YP_002403087.1;Parent=gene2068;Note=catalyzes the formation of phosphoenolpyruvate from pyruvate;Dbxref=Genbank:YP_002403087.1,GeneID:7148548;gbkey=CDS;product=pyruvate kinase;protein_id=YP_002403087.1;transl_table=11
NC_011748.1	RefSeq	gene	2090405	2091376	.	-	.	ID=gene2069;Name=lpxM;Dbxref=GeneID:7147315;gbkey=Gene;gene=lpxM;locus_tag=EC55989_2034
NC_011748.1	RefSeq	CDS	2090405	2091376	.	-	0	ID=cds1943;Name=YP_002403088.1;Parent=gene2069;Note=Transfers myristate or laurate%2C activated on ACP%2C to the lipid IVA moiety of %28KDO%292-%28lauroyl%29-lipid IVA;Dbxref=Genbank:YP_002403088.1,GeneID:7147315;gbkey=CDS;product=lipid A biosynthesis %28KDO%292-%28lauroyl%29-lipid IVA acyltransferase;protein_id=YP_002403088.1;transl_table=11
NC_011748.1	RefSeq	gene	2091496	2092818	.	-	.	ID=gene2070;Name=yebA;Dbxref=GeneID:7146742;gbkey=Gene;gene=yebA;locus_tag=EC55989_2035
NC_011748.1	RefSeq	CDS	2091496	2092818	.	-	0	ID=cds1944;Name=YP_002403089.1;Parent=gene2070;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 1732206%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002403089.1,GeneID:7146742;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403089.1;transl_table=11
NC_011748.1	RefSeq	gene	2092834	2093766	.	-	.	ID=gene2071;Name=znuA;Dbxref=GeneID:7148542;gbkey=Gene;gene=znuA;locus_tag=EC55989_2036
NC_011748.1	RefSeq	CDS	2092834	2093766	.	-	0	ID=cds1945;Name=YP_002403090.1;Parent=gene2071;Note=involved in transport of zinc%28II%29 with ZnuA and C;Dbxref=Genbank:YP_002403090.1,GeneID:7148542;gbkey=CDS;product=high-affinity zinc transporter periplasmic protein;protein_id=YP_002403090.1;transl_table=11
NC_011748.1	RefSeq	gene	2093845	2094600	.	+	.	ID=gene2072;Name=znuC;Dbxref=GeneID:7149492;gbkey=Gene;gene=znuC;locus_tag=EC55989_2037
NC_011748.1	RefSeq	CDS	2093845	2094600	.	+	0	ID=cds1946;Name=YP_002403091.1;Parent=gene2072;Note=involved in transport of zinc%28II%29 with ZnuA and C;Dbxref=Genbank:YP_002403091.1,GeneID:7149492;gbkey=CDS;product=high-affinity zinc transporter ATPase;protein_id=YP_002403091.1;transl_table=11
NC_011748.1	RefSeq	gene	2094597	2095382	.	+	.	ID=gene2073;Name=znuB;Dbxref=GeneID:7149494;gbkey=Gene;gene=znuB;locus_tag=EC55989_2038
NC_011748.1	RefSeq	CDS	2094597	2095382	.	+	0	ID=cds1947;Name=YP_002403092.1;Parent=gene2073;Note=involved in transport of zinc%28II%29 with ZnuA and C;Dbxref=Genbank:YP_002403092.1,GeneID:7149494;gbkey=CDS;product=high-affinity zinc transporter membrane protein;protein_id=YP_002403092.1;transl_table=11
NC_011748.1	RefSeq	gene	2095529	2096539	.	-	.	ID=gene2074;Name=ruvB;Dbxref=GeneID:7149493;gbkey=Gene;gene=ruvB;locus_tag=EC55989_2039
NC_011748.1	RefSeq	CDS	2095529	2096539	.	-	0	ID=cds1948;Name=YP_002403093.1;Parent=gene2074;Note=promotes strand exchange during homologous recombination%3B RuvAB complex promotes branch migration%3B RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences%3B forms hexameric rings around opposite DNA arms%3B requires ATP for branch migration and orientation of RuvAB complex determines direction of migration;Dbxref=Genbank:YP_002403093.1,GeneID:7149493;gbkey=CDS;product=Holliday junction DNA helicase RuvB;protein_id=YP_002403093.1;transl_table=11
NC_011748.1	RefSeq	gene	2096548	2097159	.	-	.	ID=gene2075;Name=ruvA;Dbxref=GeneID:7147570;gbkey=Gene;gene=ruvA;locus_tag=EC55989_2040
NC_011748.1	RefSeq	CDS	2096548	2097159	.	-	0	ID=cds1949;Name=YP_002403094.1;Parent=gene2075;Note=plays an essential role in ATP-dependent branch migration of the Holliday junction;Dbxref=Genbank:YP_002403094.1,GeneID:7147570;gbkey=CDS;product=Holliday junction DNA helicase RuvA;protein_id=YP_002403094.1;transl_table=11
NC_011748.1	RefSeq	gene	2097434	2098036	.	+	.	ID=gene2076;Name=yebB;Dbxref=GeneID:7147569;gbkey=Gene;gene=yebB;locus_tag=EC55989_2041
NC_011748.1	RefSeq	CDS	2097434	2098036	.	+	0	ID=cds1950;Name=YP_002403095.1;Parent=gene2076;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403095.1,GeneID:7147569;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403095.1;transl_table=11
NC_011748.1	RefSeq	gene	2098038	2098559	.	-	.	ID=gene2077;Name=ruvC;Dbxref=GeneID:7148543;gbkey=Gene;gene=ruvC;locus_tag=EC55989_2042
NC_011748.1	RefSeq	CDS	2098038	2098559	.	-	0	ID=cds1951;Name=YP_002403096.1;Parent=gene2077;Note=endonuclease%3B resolves Holliday structures%3B forms a complex of RuvABC%3B the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration%3B RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity;Dbxref=Genbank:YP_002403096.1,GeneID:7148543;gbkey=CDS;product=Holliday junction resolvase;protein_id=YP_002403096.1;transl_table=11
NC_011748.1	RefSeq	gene	2098594	2099334	.	-	.	ID=gene2078;Name=yebC;Dbxref=GeneID:7147571;gbkey=Gene;gene=yebC;locus_tag=EC55989_2043
NC_011748.1	RefSeq	CDS	2098594	2099334	.	-	0	ID=cds1952;Name=YP_002403097.1;Parent=gene2078;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403097.1,GeneID:7147571;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403097.1;transl_table=11
NC_011748.1	RefSeq	gene	2099363	2099806	.	-	.	ID=gene2079;Name=ntpA;Dbxref=GeneID:7148544;gbkey=Gene;gene=ntpA;locus_tag=EC55989_2044
NC_011748.1	RefSeq	CDS	2099363	2099806	.	-	0	ID=cds1953;Name=YP_002403098.1;Parent=gene2079;Note=converts dATP to dAMP and pyrophosphate;Dbxref=Genbank:YP_002403098.1,GeneID:7148544;gbkey=CDS;product=dATP pyrophosphohydrolase;protein_id=YP_002403098.1;transl_table=11
NC_011748.1	RefSeq	gene	2099808	2101580	.	-	.	ID=gene2080;Name=aspS;Dbxref=GeneID:7147036;gbkey=Gene;gene=aspS;locus_tag=EC55989_2045
NC_011748.1	RefSeq	CDS	2099808	2101580	.	-	0	ID=cds1954;Name=YP_002403099.1;Parent=gene2080;Note=catalyzes a two-step reaction%2C first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B contains discriminating and non-discriminating subtypes;Dbxref=Genbank:YP_002403099.1,GeneID:7147036;gbkey=CDS;product=aspartyl-tRNA synthetase;protein_id=YP_002403099.1;transl_table=11
NC_011748.1	RefSeq	gene	2101890	2102456	.	+	.	ID=gene2081;Name=yecD;Dbxref=GeneID:7145573;gbkey=Gene;gene=yecD;locus_tag=EC55989_2046
NC_011748.1	RefSeq	CDS	2101890	2102456	.	+	0	ID=cds1955;Name=YP_002403100.1;Parent=gene2081;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002403100.1,GeneID:7145573;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403100.1;transl_table=11
NC_011748.1	RefSeq	gene	2102453	2103271	.	+	.	ID=gene2082;Name=yecE;Dbxref=GeneID:7148562;gbkey=Gene;gene=yecE;locus_tag=EC55989_2047
NC_011748.1	RefSeq	CDS	2102453	2103271	.	+	0	ID=cds1956;Name=YP_002403101.1;Parent=gene2082;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 2129559%2C 7984428;Dbxref=Genbank:YP_002403101.1,GeneID:7148562;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403101.1;transl_table=11
NC_011748.1	RefSeq	gene	2103324	2103719	.	+	.	ID=gene2083;Name=yecN;Dbxref=GeneID:7148563;gbkey=Gene;gene=yecN;locus_tag=EC55989_2048
NC_011748.1	RefSeq	CDS	2103324	2103719	.	+	0	ID=cds1957;Name=YP_002403102.1;Parent=gene2083;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002403102.1,GeneID:7148563;gbkey=CDS;product=inner membrane protein;protein_id=YP_002403102.1;transl_table=11
NC_011748.1	RefSeq	gene	2103760	2104503	.	+	.	ID=gene2084;Name=yecO;Dbxref=GeneID:7148570;gbkey=Gene;gene=yecO;locus_tag=EC55989_2049
NC_011748.1	RefSeq	CDS	2103760	2104503	.	+	0	ID=cds1958;Name=YP_002403103.1;Parent=gene2084;Note=Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism%3B PubMedId : 11746687%3B Product type e : enzyme;Dbxref=Genbank:YP_002403103.1,GeneID:7148570;gbkey=CDS;product=AdoMet-dependent methyltransferase;protein_id=YP_002403103.1;transl_table=11
NC_011748.1	RefSeq	gene	2104500	2105471	.	+	.	ID=gene2085;Name=yecP;Dbxref=GeneID:7148571;gbkey=Gene;gene=yecP;locus_tag=EC55989_2050
NC_011748.1	RefSeq	CDS	2104500	2105471	.	+	0	ID=cds1959;Name=YP_002403104.1;Parent=gene2085;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403104.1,GeneID:7148571;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403104.1;transl_table=11
NC_011748.1	RefSeq	gene	2105636	2108065	.	-	.	ID=gene2086;Name=torZ;Dbxref=GeneID:7148572;gbkey=Gene;gene=torZ;locus_tag=EC55989_2051
NC_011748.1	RefSeq	CDS	2105636	2108065	.	-	0	ID=cds1960;Name=YP_002403105.1;Parent=gene2086;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 97077292%2C 11004177%3B Product type e : enzyme;Dbxref=Genbank:YP_002403105.1,GeneID:7148572;gbkey=CDS;product=trimethylamine N-oxide reductase system III%2C catalytic subunit;protein_id=YP_002403105.1;transl_table=11
NC_011748.1	RefSeq	gene	2108090	2109190	.	-	.	ID=gene2087;Name=torY;Dbxref=GeneID:7147828;gbkey=Gene;gene=torY;locus_tag=EC55989_2052
NC_011748.1	RefSeq	CDS	2108090	2109190	.	-	0	ID=cds1961;Name=YP_002403106.1;Parent=gene2087;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 20461225%2C 8919859%3B Product type c : carrier;Dbxref=Genbank:YP_002403106.1,GeneID:7147828;gbkey=CDS;product=TMAO reductase III %28TorYZ%29%2C cytochrome c-type subunit;protein_id=YP_002403106.1;transl_table=11
NC_011748.1	RefSeq	STS	2108808	2110399	.	+	.	ID=id146;Dbxref=UniSTS:474277;gbkey=STS
NC_011748.1	RefSeq	gene	2109578	2110324	.	-	.	ID=gene2088;Name=cutC;Dbxref=GeneID:7147827;gbkey=Gene;gene=cutC;locus_tag=EC55989_2053
NC_011748.1	RefSeq	CDS	2109578	2110324	.	-	0	ID=cds1962;Name=YP_002403107.1;Parent=gene2088;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 95362641%2C 7635807%3B Product type t : transporter;Dbxref=Genbank:YP_002403107.1,GeneID:7147827;gbkey=CDS;product=copper homeostasis protein CutC;protein_id=YP_002403107.1;transl_table=11
NC_011748.1	RefSeq	gene	2110338	2110904	.	-	.	ID=gene2089;Name=yecM;Dbxref=GeneID:7145799;gbkey=Gene;gene=yecM;locus_tag=EC55989_2054
NC_011748.1	RefSeq	CDS	2110338	2110904	.	-	0	ID=cds1963;Name=YP_002403108.1;Parent=gene2089;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 12660999%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002403108.1,GeneID:7145799;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403108.1;transl_table=11
NC_011748.1	RefSeq	gene	2111120	2112853	.	+	.	ID=gene2090;Name=argS;Dbxref=GeneID:7148569;gbkey=Gene;gene=argS;locus_tag=EC55989_2055
NC_011748.1	RefSeq	CDS	2111120	2112853	.	+	0	ID=cds1964;Name=YP_002403109.1;Parent=gene2090;Note=catalyzes a two-step reaction%2C first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B class-I aminoacyl-tRNA synthetase;Dbxref=Genbank:YP_002403109.1,GeneID:7148569;gbkey=CDS;product=arginyl-tRNA synthetase;protein_id=YP_002403109.1;transl_table=11
NC_011748.1	RefSeq	gene	2113030	2113518	.	+	.	ID=gene2091;Name=yecT;Dbxref=GeneID:7145536;gbkey=Gene;gene=yecT;locus_tag=EC55989_2056
NC_011748.1	RefSeq	CDS	2113030	2113518	.	+	0	ID=cds1965;Name=YP_002403110.1;Parent=gene2091;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403110.1,GeneID:7145536;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403110.1;transl_table=11
NC_011748.1	RefSeq	gene	2113638	2114030	.	-	.	ID=gene2092;Name=flhE;Dbxref=GeneID:7148575;gbkey=Gene;gene=flhE;locus_tag=EC55989_2057
NC_011748.1	RefSeq	CDS	2113638	2114030	.	-	0	ID=cds1966;Name=YP_002403111.1;Parent=gene2092;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 8002587%2C 1482109%2C 89181349;Dbxref=Genbank:YP_002403111.1,GeneID:7148575;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403111.1;transl_table=11
NC_011748.1	RefSeq	gene	2114030	2116108	.	-	.	ID=gene2093;Name=flhA;Dbxref=GeneID:7146142;gbkey=Gene;gene=flhA;locus_tag=EC55989_2058
NC_011748.1	RefSeq	CDS	2114030	2116108	.	-	0	ID=cds1967;Name=YP_002403112.1;Parent=gene2093;Note=membrane protein involved in the flagellar export apparatus;Dbxref=Genbank:YP_002403112.1,GeneID:7146142;gbkey=CDS;product=flagellar biosynthesis protein FlhA;protein_id=YP_002403112.1;transl_table=11
NC_011748.1	RefSeq	gene	2116101	2117249	.	-	.	ID=gene2094;Name=flhB;Dbxref=GeneID:7146138;gbkey=Gene;gene=flhB;locus_tag=EC55989_2059
NC_011748.1	RefSeq	CDS	2116101	2117249	.	-	0	ID=cds1968;Name=YP_002403113.1;Parent=gene2094;Note=membrane protein responsible for substrate specificity switching from rod%2Fhook-type export to filament-type export;Dbxref=Genbank:YP_002403113.1,GeneID:7146138;gbkey=CDS;product=flagellar biosynthesis protein FlhB;protein_id=YP_002403113.1;transl_table=11
NC_011748.1	RefSeq	gene	2117451	2118095	.	-	.	ID=gene2095;Name=cheZ;Dbxref=GeneID:7146139;gbkey=Gene;gene=cheZ;locus_tag=EC55989_2060
NC_011748.1	RefSeq	CDS	2117451	2118095	.	-	0	ID=cds1969;Name=YP_002403114.1;Parent=gene2095;Note=cytosolic phosphatase which functions in the chemotaxis signal transduction complex by controlling the level of phosphorylated CheY through dephosphorylation;Dbxref=Genbank:YP_002403114.1,GeneID:7146139;gbkey=CDS;product=chemotaxis regulator CheZ;protein_id=YP_002403114.1;transl_table=11
NC_011748.1	RefSeq	gene	2118106	2118495	.	-	.	ID=gene2096;Name=cheY;Dbxref=GeneID:7145702;gbkey=Gene;gene=cheY;locus_tag=EC55989_2061
NC_011748.1	RefSeq	CDS	2118106	2118495	.	-	0	ID=cds1970;Name=YP_002403115.1;Parent=gene2096;Note=chemotaxis regulator that%2C when phosphorylated%2C interacts with the flagellar motor causing the flagella to spin clockwise which causes the cell to tumble;Dbxref=Genbank:YP_002403115.1,GeneID:7145702;gbkey=CDS;product=chemotaxis regulatory protein CheY;protein_id=YP_002403115.1;transl_table=11
NC_011748.1	RefSeq	gene	2118510	2119559	.	-	.	ID=gene2097;Name=cheB;Dbxref=GeneID:7145701;gbkey=Gene;gene=cheB;locus_tag=EC55989_2062
NC_011748.1	RefSeq	CDS	2118510	2119559	.	-	0	ID=cds1971;Name=YP_002403116.1;Parent=gene2097;Note=regulates chemotaxis by demethylation of methyl-accepting chemotaxis proteins;Dbxref=Genbank:YP_002403116.1,GeneID:7145701;gbkey=CDS;product=chemotaxis-specific methylesterase;protein_id=YP_002403116.1;transl_table=11
NC_011748.1	RefSeq	gene	2119562	2120422	.	-	.	ID=gene2098;Name=cheR;Dbxref=GeneID:7145698;gbkey=Gene;gene=cheR;locus_tag=EC55989_2063
NC_011748.1	RefSeq	CDS	2119562	2120422	.	-	0	ID=cds1972;Name=YP_002403117.1;Parent=gene2098;Note=methylates the MCP;Dbxref=Genbank:YP_002403117.1,GeneID:7145698;gbkey=CDS;product=chemotaxis methyltransferase CheR;protein_id=YP_002403117.1;transl_table=11
NC_011748.1	RefSeq	gene	2120441	2122042	.	-	.	ID=gene2099;Name=tap;Dbxref=GeneID:7145699;gbkey=Gene;gene=tap;locus_tag=EC55989_2064
NC_011748.1	RefSeq	CDS	2120441	2122042	.	-	0	ID=cds1973;Name=YP_002403118.1;Parent=gene2099;Note=mediates taxis toward dipeptides;Dbxref=Genbank:YP_002403118.1,GeneID:7145699;gbkey=CDS;product=methyl-accepting protein IV;protein_id=YP_002403118.1;transl_table=11
NC_011748.1	RefSeq	gene	2122088	2123749	.	-	.	ID=gene2100;Name=tar;Dbxref=GeneID:7147750;gbkey=Gene;gene=tar;locus_tag=EC55989_2065
NC_011748.1	RefSeq	CDS	2122088	2123749	.	-	0	ID=cds1974;Name=YP_002403119.1;Parent=gene2100;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 90094243%2C 92165727%2C 6305515%2C 9315712%3B Product type r : regulator;Dbxref=Genbank:YP_002403119.1,GeneID:7147750;gbkey=CDS;product=methyl-accepting chemotaxis protein II;protein_id=YP_002403119.1;transl_table=11
NC_011748.1	RefSeq	gene	2123797	2123874	.	+	.	ID=gene2101;Name=C0465;Dbxref=GeneID:7147751;gbkey=Gene;gene=C0465;locus_tag=EC55989_misc_RNA_41
NC_011748.1	RefSeq	transcript	2123797	2123874	.	+	.	ID=rna77;Parent=gene2101;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 12202758%3B Product type n : RNA;Dbxref=GeneID:7147751;gbkey=misc_RNA;product=C0465
NC_011748.1	RefSeq	exon	2123797	2123874	.	+	.	ID=id147;Parent=rna77;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 12202758%3B Product type n : RNA;Dbxref=GeneID:7147751;gbkey=misc_RNA;product=C0465
NC_011748.1	RefSeq	gene	2123894	2124397	.	-	.	ID=gene2102;Name=cheW;Dbxref=GeneID:7145650;gbkey=Gene;gene=cheW;locus_tag=EC55989_2066
NC_011748.1	RefSeq	CDS	2123894	2124397	.	-	0	ID=cds1975;Name=YP_002403120.1;Parent=gene2102;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 91126073%2C 91296802%2C 91317710%2C 2002011%2C 3510184%3B Product type r : regulator;Dbxref=Genbank:YP_002403120.1,GeneID:7145650;gbkey=CDS;product=purine-binding chemotaxis protein;protein_id=YP_002403120.1;transl_table=11
NC_011748.1	RefSeq	gene	2124418	2126382	.	-	.	ID=gene2103;Name=cheA;Dbxref=GeneID:7145700;gbkey=Gene;gene=cheA;locus_tag=EC55989_2067
NC_011748.1	RefSeq	CDS	2124418	2126382	.	-	0	ID=cds1976;Name=YP_002403121.1;Parent=gene2103;Note=chemotactic sensory histidine kinase in two-component regulatory system with CheB and CheY%3B sensory histidine kinase%2Fsignal sensing protein%3B CheA is the histidine kinase component;Dbxref=Genbank:YP_002403121.1,GeneID:7145700;gbkey=CDS;product=chemotaxis protein CheA;protein_id=YP_002403121.1;transl_table=11
NC_011748.1	RefSeq	gene	2126387	2127313	.	-	.	ID=gene2104;Name=motB;Dbxref=GeneID:7145697;gbkey=Gene;gene=motB;locus_tag=EC55989_2068
NC_011748.1	RefSeq	CDS	2126387	2127313	.	-	0	ID=cds1977;Name=YP_002403122.1;Parent=gene2104;Note=with MotA forms the ion channels that couple flagellar rotation to proton%2Fsodium motive force across the membrane and forms the stator elements of the rotary flagellar machine;Dbxref=Genbank:YP_002403122.1,GeneID:7145697;gbkey=CDS;product=flagellar motor protein MotB;protein_id=YP_002403122.1;transl_table=11
NC_011748.1	RefSeq	gene	2127310	2128197	.	-	.	ID=gene2105;Name=motA;Dbxref=GeneID:7146889;gbkey=Gene;gene=motA;locus_tag=EC55989_2069
NC_011748.1	RefSeq	CDS	2127310	2128197	.	-	0	ID=cds1978;Name=YP_002403123.1;Parent=gene2105;Note=With MotB forms the ion channels that couple flagellar rotation to proton%2Fsodium motive force across the membrane and forms the stator elements of the rotary flagellar machine;Dbxref=Genbank:YP_002403123.1,GeneID:7146889;gbkey=CDS;product=flagellar motor protein MotA;protein_id=YP_002403123.1;transl_table=11
NC_011748.1	RefSeq	gene	2128324	2128902	.	-	.	ID=gene2106;Name=flhC;Dbxref=GeneID:7146888;gbkey=Gene;gene=flhC;locus_tag=EC55989_2070
NC_011748.1	RefSeq	CDS	2128324	2128902	.	-	0	ID=cds1979;Name=YP_002403124.1;Parent=gene2106;Note=With FlhD is involved in the activation of class 2 flagellar genes and as well as a number of other genetic systems;Dbxref=Genbank:YP_002403124.1,GeneID:7146888;gbkey=CDS;product=transcriptional activator FlhC;protein_id=YP_002403124.1;transl_table=11
NC_011748.1	RefSeq	gene	2128905	2129264	.	-	.	ID=gene2107;Name=flhD;Dbxref=GeneID:7146140;gbkey=Gene;gene=flhD;locus_tag=EC55989_2071
NC_011748.1	RefSeq	CDS	2128905	2129264	.	-	0	ID=cds1980;Name=YP_002403125.1;Parent=gene2107;Note=with FlhC is involved in the activation of class 2 flagellar genes and is involved in the regulation of a number of other genetic systems;Dbxref=Genbank:YP_002403125.1,GeneID:7146140;gbkey=CDS;product=transcriptional activator FlhD;protein_id=YP_002403125.1;transl_table=11
NC_011748.1	RefSeq	gene	2130034	2130462	.	+	.	ID=gene2108;Name=yecG;Dbxref=GeneID:7146141;gbkey=Gene;gene=yecG;locus_tag=EC55989_2072
NC_011748.1	RefSeq	CDS	2130034	2130462	.	+	0	ID=cds1981;Name=YP_002403126.1;Parent=gene2108;Note=ppGpp-dependent%3B membrane-associated%2C stress protein produced under conditions of nutrient deprivation%2C osmotic shock and oxidative stress;Dbxref=Genbank:YP_002403126.1,GeneID:7146141;gbkey=CDS;product=universal stress protein UspC;protein_id=YP_002403126.1;transl_table=11
NC_011748.1	RefSeq	gene	2130469	2131893	.	-	.	ID=gene2109;Name=otsA;Dbxref=GeneID:7148565;gbkey=Gene;gene=otsA;locus_tag=EC55989_2073
NC_011748.1	RefSeq	CDS	2130469	2131893	.	-	0	ID=cds1982;Name=YP_002403127.1;Parent=gene2109;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 92078100%2C 92121128%2C 93302496%2C 8045430%3B Product type e : enzyme;Dbxref=Genbank:YP_002403127.1,GeneID:7148565;gbkey=CDS;product=trehalose-6-phosphate synthase;protein_id=YP_002403127.1;transl_table=11
NC_011748.1	RefSeq	gene	2131868	2132668	.	-	.	ID=gene2110;Name=otsB;Dbxref=GeneID:7147085;gbkey=Gene;gene=otsB;locus_tag=EC55989_2074
NC_011748.1	RefSeq	CDS	2131868	2132668	.	-	0	ID=cds1983;Name=YP_002403128.1;Parent=gene2110;Note=biosynthetic%3B catalyzes the formation of trehalose and phosphate from trehalose-6-phosphate%3B expression is increased under osmotic stress and induced during the transition to stationary phase and by decreased temperature;Dbxref=Genbank:YP_002403128.1,GeneID:7147085;gbkey=CDS;product=trehalose-6-phosphate phosphatase;protein_id=YP_002403128.1;transl_table=11
NC_011748.1	RefSeq	gene	2132835	2133824	.	-	.	ID=gene2111;Name=araH;Dbxref=GeneID:7147086;gbkey=Gene;gene=araH;locus_tag=EC55989_2075
NC_011748.1	RefSeq	CDS	2132835	2133824	.	-	0	ID=cds1984;Name=YP_002403129.1;Parent=gene2111;Note=Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose;Dbxref=Genbank:YP_002403129.1,GeneID:7147086;gbkey=CDS;product=L-arabinose transporter permease;protein_id=YP_002403129.1;transl_table=11
NC_011748.1	RefSeq	gene	2133836	2135350	.	-	.	ID=gene2112;Name=araG;Dbxref=GeneID:7145520;gbkey=Gene;gene=araG;locus_tag=EC55989_2076
NC_011748.1	RefSeq	CDS	2133836	2135350	.	-	0	ID=cds1985;Name=YP_002403130.1;Parent=gene2112;Note=Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose;Dbxref=Genbank:YP_002403130.1,GeneID:7145520;gbkey=CDS;product=L-arabinose transporter ATP-binding protein;protein_id=YP_002403130.1;transl_table=11
NC_011748.1	RefSeq	gene	2135420	2136409	.	-	.	ID=gene2113;Name=araF;Dbxref=GeneID:7145519;gbkey=Gene;gene=araF;locus_tag=EC55989_2077
NC_011748.1	RefSeq	CDS	2135420	2136409	.	-	0	ID=cds1986;Name=YP_002403131.1;Parent=gene2113;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 89255061%2C 90375534%2C 2445996%2C 326784%2C 326785%2C 6885805%2C 7031057%2C 9298646%3B Product type t : transporter;Dbxref=Genbank:YP_002403131.1,GeneID:7145519;gbkey=CDS;product=L-arabinose transporter subunit %3B periplasmic-binding component of ABC superfamily;protein_id=YP_002403131.1;transl_table=11
NC_011748.1	RefSeq	gene	2137206	2137709	.	+	.	ID=gene2114;Name=yecI;Dbxref=GeneID:7145518;gbkey=Gene;gene=yecI;locus_tag=EC55989_2078
NC_011748.1	RefSeq	CDS	2137206	2137709	.	+	0	ID=cds1987;Name=YP_002403132.1;Parent=gene2114;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pc :  carrier;Dbxref=Genbank:YP_002403132.1,GeneID:7145518;gbkey=CDS;product=ferritin-like protein;protein_id=YP_002403132.1;transl_table=11
NC_011748.1	RefSeq	gene	2137788	2138039	.	-	.	ID=gene2115;Name=yecJ;Dbxref=GeneID:7148567;gbkey=Gene;gene=yecJ;locus_tag=EC55989_2079
NC_011748.1	RefSeq	CDS	2137788	2138039	.	-	0	ID=cds1988;Name=YP_002403133.1;Parent=gene2115;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403133.1,GeneID:7148567;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403133.1;transl_table=11
NC_011748.1	RefSeq	gene	2138120	2138279	.	-	.	ID=gene2116;Name=isrB;Dbxref=GeneID:7148568;gbkey=Gene;gene=isrB;locus_tag=EC55989_misc_RNA_42
NC_011748.1	RefSeq	transcript	2138120	2138279	.	-	.	ID=rna78;Parent=gene2116;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 12069726%3B Product type n : RNA;Dbxref=GeneID:7148568;gbkey=misc_RNA;product=IsrB
NC_011748.1	RefSeq	exon	2138120	2138279	.	-	.	ID=id148;Parent=rna78;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 12069726%3B Product type n : RNA;Dbxref=GeneID:7148568;gbkey=misc_RNA;product=IsrB
NC_011748.1	RefSeq	gene	2138151	2138297	.	+	.	ID=gene2117;Name=EC55989_2080;Dbxref=GeneID:7146634;gbkey=Gene;locus_tag=EC55989_2080
NC_011748.1	RefSeq	CDS	2138151	2138297	.	+	0	ID=cds1989;Name=YP_002403134.1;Parent=gene2117;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403134.1,GeneID:7146634;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403134.1;transl_table=11
NC_011748.1	RefSeq	gene	2138503	2138826	.	+	.	ID=gene2118;Name=yecR;Dbxref=GeneID:7144680;gbkey=Gene;gene=yecR;locus_tag=EC55989_2081
NC_011748.1	RefSeq	CDS	2138503	2138826	.	+	0	ID=cds1990;Name=YP_002403135.1;Parent=gene2118;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403135.1,GeneID:7144680;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403135.1;transl_table=11
NC_011748.1	RefSeq	gene	2138998	2139495	.	+	.	ID=gene2119;Name=ftn;Dbxref=GeneID:7148573;gbkey=Gene;gene=ftn;locus_tag=EC55989_2082
NC_011748.1	RefSeq	CDS	2138998	2139495	.	+	0	ID=cds1991;Name=YP_002403136.1;Parent=gene2119;Note=cytoplasmic iron storage protein;Dbxref=Genbank:YP_002403136.1,GeneID:7148573;gbkey=CDS;product=ferritin;protein_id=YP_002403136.1;transl_table=11
NC_011748.1	RefSeq	gene	2139533	2139772	.	-	.	ID=gene2120;Name=yecH;Dbxref=GeneID:7146209;gbkey=Gene;gene=yecH;locus_tag=EC55989_2083
NC_011748.1	RefSeq	CDS	2139533	2139772	.	-	0	ID=cds1992;Name=YP_002403137.1;Parent=gene2120;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403137.1,GeneID:7146209;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403137.1;transl_table=11
NC_011748.1	RefSeq	gene	2139962	2141173	.	+	.	ID=gene2121;Name=tyrP;Dbxref=GeneID:7148566;gbkey=Gene;gene=tyrP;locus_tag=EC55989_2084
NC_011748.1	RefSeq	CDS	2139962	2141173	.	+	0	ID=cds1993;Name=YP_002403138.1;Parent=gene2121;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 89008121%2C 2022620%3B Product type t : transporter;Dbxref=Genbank:YP_002403138.1,GeneID:7148566;gbkey=CDS;product=tyrosine transporter;protein_id=YP_002403138.1;transl_table=11
NC_011748.1	RefSeq	gene	2141235	2141900	.	-	.	ID=gene2122;Name=yecA;Dbxref=GeneID:7147883;gbkey=Gene;gene=yecA;locus_tag=EC55989_2085
NC_011748.1	RefSeq	CDS	2141235	2141900	.	-	0	ID=cds1994;Name=YP_002403139.1;Parent=gene2122;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403139.1,GeneID:7147883;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403139.1;transl_table=11
NC_011748.1	RefSeq	gene	2142257	2143258	.	-	.	ID=gene2123;Name=int;Dbxref=GeneID:7148560;gbkey=Gene;gene=int;locus_tag=EC55989_2086
NC_011748.1	RefSeq	CDS	2142257	2143258	.	-	0	ID=cds1995;Name=YP_002403140.1;Parent=gene2123;Note=Evidence 2b : Function of strongly homologous gene%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002403140.1,GeneID:7148560;gbkey=CDS;product=Integrase;protein_id=YP_002403140.1;transl_table=11
NC_011748.1	RefSeq	gene	2143264	2143611	.	-	.	ID=gene2124;Name=EC55989_2087;Dbxref=GeneID:7146603;gbkey=Gene;locus_tag=EC55989_2087
NC_011748.1	RefSeq	CDS	2143264	2143611	.	-	0	ID=cds1996;Name=YP_002403141.1;Parent=gene2124;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002403141.1,GeneID:7146603;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403141.1;transl_table=11
NC_011748.1	RefSeq	gene	2143641	2144291	.	-	.	ID=gene2125;Name=EC55989_2088;Dbxref=GeneID:7144681;gbkey=Gene;locus_tag=EC55989_2088
NC_011748.1	RefSeq	CDS	2143641	2144291	.	-	0	ID=cds1997;Name=YP_002403142.1;Parent=gene2125;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002403142.1,GeneID:7144681;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403142.1;transl_table=11
NC_011748.1	RefSeq	gene	2144307	2144711	.	-	.	ID=gene2126;Name=EC55989_2089;Dbxref=GeneID:7144682;gbkey=Gene;locus_tag=EC55989_2089
NC_011748.1	RefSeq	CDS	2144307	2144711	.	-	0	ID=cds1998;Name=YP_002403143.1;Parent=gene2126;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002403143.1,GeneID:7144682;gbkey=CDS;product=regulator;protein_id=YP_002403143.1;transl_table=11
NC_011748.1	RefSeq	gene	2144787	2144993	.	+	.	ID=gene2127;Name=EC55989_2090;Dbxref=GeneID:7144683;gbkey=Gene;locus_tag=EC55989_2090
NC_011748.1	RefSeq	CDS	2144787	2144993	.	+	0	ID=cds1999;Name=YP_002403144.1;Parent=gene2127;Note=Evidence 5 : No homology to any previously reported sequences%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002403144.1,GeneID:7144683;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403144.1;transl_table=11
NC_011748.1	RefSeq	gene	2145010	2145213	.	+	.	ID=gene2128;Name=EC55989_2091;Dbxref=GeneID:7144684;gbkey=Gene;locus_tag=EC55989_2091
NC_011748.1	RefSeq	CDS	2145010	2145213	.	+	0	ID=cds2000;Name=YP_002403145.1;Parent=gene2128;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002403145.1,GeneID:7144684;gbkey=CDS;product=phage regulator DNA-binding protein%29;protein_id=YP_002403145.1;transl_table=11
NC_011748.1	RefSeq	gene	2145425	2145586	.	+	.	ID=gene2129;Name=EC55989_2092;Dbxref=GeneID:7144685;gbkey=Gene;locus_tag=EC55989_2092
NC_011748.1	RefSeq	CDS	2145425	2145586	.	+	0	ID=cds2001;Name=YP_002403146.1;Parent=gene2129;Note=Evidence 7 : Gene remnant%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002403146.1,GeneID:7144685;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403146.1;transl_table=11
NC_011748.1	RefSeq	gene	2145537	2145875	.	+	.	ID=gene2130;Name=EC55989_2093;Dbxref=GeneID:7144686;gbkey=Gene;locus_tag=EC55989_2093
NC_011748.1	RefSeq	CDS	2145537	2145875	.	+	0	ID=cds2002;Name=YP_002403147.1;Parent=gene2130;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002403147.1,GeneID:7144686;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403147.1;transl_table=11
NC_011748.1	RefSeq	gene	2145884	2146129	.	+	.	ID=gene2131;Name=EC55989_2094;Dbxref=GeneID:7144687;gbkey=Gene;locus_tag=EC55989_2094
NC_011748.1	RefSeq	CDS	2145884	2146129	.	+	0	ID=cds2003;Name=YP_002403148.1;Parent=gene2131;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002403148.1,GeneID:7144687;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403148.1;transl_table=11
NC_011748.1	RefSeq	gene	2146275	2146529	.	+	.	ID=gene2132;Name=EC55989_2095;Dbxref=GeneID:7144688;gbkey=Gene;locus_tag=EC55989_2095
NC_011748.1	RefSeq	CDS	2146275	2146529	.	+	0	ID=cds2004;Name=YP_002403149.1;Parent=gene2132;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002403149.1,GeneID:7144688;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403149.1;transl_table=11
NC_011748.1	RefSeq	gene	2146469	2146771	.	+	.	ID=gene2133;Name=EC55989_2096;Dbxref=GeneID:7144689;gbkey=Gene;locus_tag=EC55989_2096
NC_011748.1	RefSeq	CDS	2146469	2146771	.	+	0	ID=cds2005;Name=YP_002403150.1;Parent=gene2133;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002403150.1,GeneID:7144689;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403150.1;transl_table=11
NC_011748.1	RefSeq	gene	2146913	2147278	.	+	.	ID=gene2134;Name=EC55989_2097;Dbxref=GeneID:7144690;gbkey=Gene;locus_tag=EC55989_2097
NC_011748.1	RefSeq	CDS	2146913	2147278	.	+	0	ID=cds2006;Name=YP_002403151.1;Parent=gene2134;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002403151.1,GeneID:7144690;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403151.1;transl_table=11
NC_011748.1	RefSeq	gene	2147285	2150107	.	+	.	ID=gene2135;Name=EC55989_2098;Dbxref=GeneID:7144691;gbkey=Gene;locus_tag=EC55989_2098
NC_011748.1	RefSeq	CDS	2147285	2150107	.	+	0	ID=cds2007;Name=YP_002403152.1;Parent=gene2135;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002403152.1,GeneID:7144691;gbkey=CDS;product=phage replication protein;protein_id=YP_002403152.1;transl_table=11
NC_011748.1	RefSeq	gene	2150184	2151143	.	+	.	ID=gene2136;Name=parM;Dbxref=GeneID:7144692;gbkey=Gene;gene=parM;locus_tag=EC55989_2099
NC_011748.1	RefSeq	CDS	2150184	2151143	.	+	0	ID=cds2008;Name=YP_002403153.1;Parent=gene2136;Note=Evidence 2b : Function of strongly homologous gene%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002403153.1,GeneID:7144692;gbkey=CDS;product=Plasmid segregation protein parM %28Protein stbA%29 %28ParA locus 36 kDa protein%29;protein_id=YP_002403153.1;transl_table=11
NC_011748.1	RefSeq	gene	2151148	2151462	.	+	.	ID=gene2137;Name=EC55989_2100;Dbxref=GeneID:7147117;gbkey=Gene;locus_tag=EC55989_2100
NC_011748.1	RefSeq	CDS	2151148	2151462	.	+	0	ID=cds2009;Name=YP_002403154.1;Parent=gene2137;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002403154.1,GeneID:7147117;gbkey=CDS;product=stability%2Fpartitioning protein phage encoded %28 plasmid partition protein%29 %28modular protein%29;protein_id=YP_002403154.1;transl_table=11
NC_011748.1	RefSeq	gene	2151482	2151913	.	+	.	ID=gene2138;Name=EC55989_2101;Dbxref=GeneID:7144693;gbkey=Gene;locus_tag=EC55989_2101
NC_011748.1	RefSeq	CDS	2151482	2151913	.	+	0	ID=cds2010;Name=YP_002403155.1;Parent=gene2138;Note=Evidence 5 : No homology to any previously reported sequences%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002403155.1,GeneID:7144693;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403155.1;transl_table=11
NC_011748.1	RefSeq	gene	2151894	2152178	.	+	.	ID=gene2139;Name=EC55989_2102;Dbxref=GeneID:7144694;gbkey=Gene;locus_tag=EC55989_2102
NC_011748.1	RefSeq	CDS	2151894	2152178	.	+	0	ID=cds2011;Name=YP_002403156.1;Parent=gene2139;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002403156.1,GeneID:7144694;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403156.1;transl_table=11
NC_011748.1	RefSeq	gene	2152201	2152587	.	-	.	ID=gene2140;Name=EC55989_2103;Dbxref=GeneID:7144695;gbkey=Gene;locus_tag=EC55989_2103
NC_011748.1	RefSeq	CDS	2152201	2152587	.	-	0	ID=cds2012;Name=YP_002403157.1;Parent=gene2140;Note=Evidence 5 : No homology to any previously reported sequences%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002403157.1,GeneID:7144695;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403157.1;transl_table=11
NC_011748.1	RefSeq	gene	2152690	2153736	.	-	.	ID=gene2141;Name=Q;Dbxref=GeneID:7144696;gbkey=Gene;gene=Q;locus_tag=EC55989_2104
NC_011748.1	RefSeq	CDS	2152690	2153736	.	-	0	ID=cds2013;Name=YP_002403158.1;Parent=gene2141;Note=Evidence 2b : Function of strongly homologous gene%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002403158.1,GeneID:7144696;gbkey=CDS;product=portal capsid protein Q %28GpQ%29;protein_id=YP_002403158.1;transl_table=11
NC_011748.1	RefSeq	gene	2153736	2155487	.	-	.	ID=gene2142;Name=P;Dbxref=GeneID:7147327;gbkey=Gene;gene=P;locus_tag=EC55989_2105
NC_011748.1	RefSeq	CDS	2153736	2155487	.	-	0	ID=cds2014;Name=YP_002403159.1;Parent=gene2142;Note=Evidence 2b : Function of strongly homologous gene%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002403159.1,GeneID:7147327;gbkey=CDS;product=Terminase%2C ATPase subunit %28GpP%29;protein_id=YP_002403159.1;transl_table=11
NC_011748.1	RefSeq	gene	2155609	2156478	.	+	.	ID=gene2143;Name=O;Dbxref=GeneID:7147090;gbkey=Gene;gene=O;locus_tag=EC55989_2106
NC_011748.1	RefSeq	CDS	2155609	2156478	.	+	0	ID=cds2015;Name=YP_002403160.1;Parent=gene2143;Note=Evidence 2b : Function of strongly homologous gene%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002403160.1,GeneID:7147090;gbkey=CDS;product=Capsid scaffolding protein O;protein_id=YP_002403160.1;transl_table=11
NC_011748.1	RefSeq	gene	2156502	2157554	.	+	.	ID=gene2144;Name=N;Dbxref=GeneID:7147061;gbkey=Gene;gene=N;locus_tag=EC55989_2107
NC_011748.1	RefSeq	CDS	2156502	2157554	.	+	0	ID=cds2016;Name=YP_002403161.1;Parent=gene2144;Note=Evidence 2b : Function of strongly homologous gene%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002403161.1,GeneID:7147061;gbkey=CDS;product=Major capsid protein precursor %28GpN%29;protein_id=YP_002403161.1;transl_table=11
NC_011748.1	RefSeq	gene	2157600	2158400	.	+	.	ID=gene2145;Name=M;Dbxref=GeneID:7146939;gbkey=Gene;gene=M;locus_tag=EC55989_2108
NC_011748.1	RefSeq	CDS	2157600	2158400	.	+	0	ID=cds2017;Name=YP_002403162.1;Parent=gene2145;Note=Evidence 2b : Function of strongly homologous gene%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002403162.1,GeneID:7146939;gbkey=CDS;product=Phage terminase%2C endonuclease small subunit M;protein_id=YP_002403162.1;transl_table=11
NC_011748.1	RefSeq	gene	2158432	2158998	.	+	.	ID=gene2146;Name=L;Dbxref=GeneID:7146762;gbkey=Gene;gene=L;locus_tag=EC55989_2109
NC_011748.1	RefSeq	CDS	2158432	2158998	.	+	0	ID=cds2018;Name=YP_002403163.1;Parent=gene2146;Note=Evidence 2b : Function of strongly homologous gene%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002403163.1,GeneID:7146762;gbkey=CDS;product=Head completion%2Fstabilization protein L;protein_id=YP_002403163.1;transl_table=11
NC_011748.1	RefSeq	gene	2158982	2159524	.	+	.	ID=gene2147;Name=EC55989_2111;Dbxref=GeneID:7146674;gbkey=Gene;locus_tag=EC55989_2111
NC_011748.1	RefSeq	CDS	2158982	2159524	.	+	0	ID=cds2019;Name=YP_002403164.1;Parent=gene2147;Note=Evidence 5 : No homology to any previously reported sequences%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002403164.1,GeneID:7146674;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403164.1;transl_table=11
NC_011748.1	RefSeq	gene	2158998	2159198	.	+	.	ID=gene2148;Name=X;Dbxref=GeneID:7144697;gbkey=Gene;gene=X;locus_tag=EC55989_2110
NC_011748.1	RefSeq	CDS	2158998	2159198	.	+	0	ID=cds2020;Name=YP_002403165.1;Parent=gene2148;Note=Evidence 2b : Function of strongly homologous gene%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002403165.1,GeneID:7144697;gbkey=CDS;product=Tail protein X %28GpX%29;protein_id=YP_002403165.1;transl_table=11
NC_011748.1	RefSeq	gene	2159521	2159913	.	+	.	ID=gene2149;Name=EC55989_2112;Dbxref=GeneID:7147981;gbkey=Gene;locus_tag=EC55989_2112
NC_011748.1	RefSeq	CDS	2159521	2159913	.	+	0	ID=cds2021;Name=YP_002403166.1;Parent=gene2149;Dbxref=Genbank:YP_002403166.1,GeneID:7147981;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403166.1;transl_table=11
NC_011748.1	RefSeq	gene	2159766	2160317	.	+	.	ID=gene2150;Name=EC55989_2113;Dbxref=GeneID:7144698;gbkey=Gene;locus_tag=EC55989_2113
NC_011748.1	RefSeq	CDS	2159766	2160317	.	+	0	ID=cds2022;Name=YP_002403167.1;Parent=gene2150;Note=Evidence 5 : No homology to any previously reported sequences%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002403167.1,GeneID:7144698;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403167.1;transl_table=11
NC_011748.1	RefSeq	gene	2160456	2162336	.	+	.	ID=gene2151;Name=EC55989_2114;Dbxref=GeneID:7144699;gbkey=Gene;locus_tag=EC55989_2114
NC_011748.1	RefSeq	CDS	2160456	2162336	.	+	0	ID=cds2023;Name=YP_002403168.1;Parent=gene2151;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002403168.1,GeneID:7144699;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403168.1;transl_table=11
NC_011748.1	RefSeq	gene	2162360	2162827	.	+	.	ID=gene2152;Name=R;Dbxref=GeneID:7144700;gbkey=Gene;gene=R;locus_tag=EC55989_2115
NC_011748.1	RefSeq	CDS	2162360	2162827	.	+	0	ID=cds2024;Name=YP_002403169.1;Parent=gene2152;Note=Evidence 2b : Function of strongly homologous gene%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002403169.1,GeneID:7144700;gbkey=CDS;product=Phage tail completion protein R;protein_id=YP_002403169.1;transl_table=11
NC_011748.1	RefSeq	gene	2162811	2163455	.	+	.	ID=gene2153;Name=S;Dbxref=GeneID:7147334;gbkey=Gene;gene=S;locus_tag=EC55989_2116
NC_011748.1	RefSeq	CDS	2162811	2163455	.	+	0	ID=cds2025;Name=YP_002403170.1;Parent=gene2153;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002403170.1,GeneID:7147334;gbkey=CDS;product=phage tail protein S;protein_id=YP_002403170.1;transl_table=11
NC_011748.1	RefSeq	gene	2163452	2164033	.	+	.	ID=gene2154;Name=V;Dbxref=GeneID:7147599;gbkey=Gene;gene=V;locus_tag=EC55989_2117
NC_011748.1	RefSeq	CDS	2163452	2164033	.	+	0	ID=cds2026;Name=YP_002403171.1;Parent=gene2154;Note=Evidence 2b : Function of strongly homologous gene%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002403171.1,GeneID:7147599;gbkey=CDS;product=baseplate assembly protein V;protein_id=YP_002403171.1;transl_table=11
NC_011748.1	RefSeq	gene	2164030	2164380	.	+	.	ID=gene2155;Name=W;Dbxref=GeneID:7147944;gbkey=Gene;gene=W;locus_tag=EC55989_2118
NC_011748.1	RefSeq	CDS	2164030	2164380	.	+	0	ID=cds2027;Name=YP_002403172.1;Parent=gene2155;Note=Evidence 2b : Function of strongly homologous gene%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002403172.1,GeneID:7147944;gbkey=CDS;product=Baseplate assembly protein W;protein_id=YP_002403172.1;transl_table=11
NC_011748.1	RefSeq	gene	2164384	2165280	.	+	.	ID=gene2156;Name=J;Dbxref=GeneID:7147955;gbkey=Gene;gene=J;locus_tag=EC55989_2119
NC_011748.1	RefSeq	CDS	2164384	2165280	.	+	0	ID=cds2028;Name=YP_002403173.1;Parent=gene2156;Note=Evidence 2b : Function of strongly homologous gene%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002403173.1,GeneID:7147955;gbkey=CDS;product=Baseplate assembly protein J;protein_id=YP_002403173.1;transl_table=11
NC_011748.1	RefSeq	gene	2165273	2165881	.	+	.	ID=gene2157;Name=I;Dbxref=GeneID:7146644;gbkey=Gene;gene=I;locus_tag=EC55989_2120
NC_011748.1	RefSeq	CDS	2165273	2165881	.	+	0	ID=cds2029;Name=YP_002403174.1;Parent=gene2157;Note=Evidence 2b : Function of strongly homologous gene%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002403174.1,GeneID:7146644;gbkey=CDS;product=Tail protein I;protein_id=YP_002403174.1;transl_table=11
NC_011748.1	RefSeq	gene	2165878	2167893	.	+	.	ID=gene2158;Name=EC55989_2121;Dbxref=GeneID:7146527;gbkey=Gene;locus_tag=EC55989_2121;pseudo=true
NC_011748.1	RefSeq	region	2165878	2167893	.	+	.	ID=id149;Note=fragment of  tail fiber protein %28partial%29%3BEvidence 7 : Gene remnant%3B Product type h : extrachromosomal origin;Dbxref=GeneID:7146527;gbkey=misc_feature
NC_011748.1	RefSeq	gene	2167893	2168471	.	+	.	ID=gene2159;Name=tfaQ;Dbxref=GeneID:7144701;gbkey=Gene;gene=tfaQ;locus_tag=EC55989_2122
NC_011748.1	RefSeq	CDS	2167893	2168471	.	+	0	ID=cds2030;Name=YP_002403175.1;Parent=gene2159;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pf :  factor;Dbxref=Genbank:YP_002403175.1,GeneID:7144701;gbkey=CDS;product=tail fiber chaperone%3B Qin prophage;protein_id=YP_002403175.1;transl_table=11
NC_011748.1	RefSeq	gene	2168515	2169120	.	-	.	ID=gene2160;Name=EC55989_2123;Dbxref=GeneID:7147780;gbkey=Gene;locus_tag=EC55989_2123
NC_011748.1	RefSeq	CDS	2168515	2169120	.	-	0	ID=cds2031;Name=YP_002403176.1;Parent=gene2160;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002403176.1,GeneID:7147780;gbkey=CDS;product=serine acetlyltransferase from phage;protein_id=YP_002403176.1;transl_table=11
NC_011748.1	RefSeq	gene	2169244	2169738	.	-	.	ID=gene2161;Name=EC55989_2124;Dbxref=GeneID:7144702;gbkey=Gene;locus_tag=EC55989_2124
NC_011748.1	RefSeq	CDS	2169244	2169738	.	-	0	ID=cds2032;Name=YP_002403177.1;Parent=gene2161;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002403177.1,GeneID:7144702;gbkey=CDS;product=tail fiber protein;protein_id=YP_002403177.1;transl_table=11
NC_011748.1	RefSeq	gene	2169745	2172561	.	-	.	ID=gene2162;Name=EC55989_2125;Dbxref=GeneID:7144703;gbkey=Gene;locus_tag=EC55989_2125
NC_011748.1	RefSeq	CDS	2169745	2172561	.	-	0	ID=cds2033;Name=YP_002403178.1;Parent=gene2162;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002403178.1,GeneID:7144703;gbkey=CDS;product=tail protein %28modular protein%29;protein_id=YP_002403178.1;transl_table=11
NC_011748.1	RefSeq	gene	2172539	2172775	.	-	.	ID=gene2163;Name=EC55989_2126;Dbxref=GeneID:7144704;gbkey=Gene;locus_tag=EC55989_2126
NC_011748.1	RefSeq	CDS	2172539	2172775	.	-	0	ID=cds2034;Name=YP_002403179.1;Parent=gene2163;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002403179.1,GeneID:7144704;gbkey=CDS;product=phage tail protein E%27;protein_id=YP_002403179.1;transl_table=11
NC_011748.1	RefSeq	gene	2172703	2173077	.	-	.	ID=gene2164;Name=EC55989_2127;Dbxref=GeneID:7144705;gbkey=Gene;locus_tag=EC55989_2127
NC_011748.1	RefSeq	CDS	2172703	2173077	.	-	0	ID=cds2035;Name=YP_002403180.1;Parent=gene2164;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002403180.1,GeneID:7144705;gbkey=CDS;product=phage tail protein E;protein_id=YP_002403180.1;transl_table=11
NC_011748.1	RefSeq	gene	2173133	2173645	.	-	.	ID=gene2165;Name=fII;Dbxref=GeneID:7144706;gbkey=Gene;gene=fII;locus_tag=EC55989_2128
NC_011748.1	RefSeq	CDS	2173133	2173645	.	-	0	ID=cds2036;Name=YP_002403181.1;Parent=gene2165;Note=Evidence 2b : Function of strongly homologous gene%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002403181.1,GeneID:7144706;gbkey=CDS;product=Major tail tube protein FII;protein_id=YP_002403181.1;transl_table=11
NC_011748.1	RefSeq	gene	2173645	2174829	.	-	.	ID=gene2166;Name=fI;Dbxref=GeneID:7146110;gbkey=Gene;gene=fI;locus_tag=EC55989_2129
NC_011748.1	RefSeq	CDS	2173645	2174829	.	-	0	ID=cds2037;Name=YP_002403182.1;Parent=gene2166;Note=Evidence 2b : Function of strongly homologous gene%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002403182.1,GeneID:7146110;gbkey=CDS;product=Major tail sheath protein FI;protein_id=YP_002403182.1;transl_table=11
NC_011748.1	RefSeq	gene	2174855	2176096	.	+	.	ID=gene2167;Name=D;Dbxref=GeneID:7146106;gbkey=Gene;gene=D;locus_tag=EC55989_2130
NC_011748.1	RefSeq	CDS	2174855	2176096	.	+	0	ID=cds2038;Name=YP_002403183.1;Parent=gene2167;Note=Evidence 2b : Function of strongly homologous gene%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002403183.1,GeneID:7146106;gbkey=CDS;product=Gene late control D protein;protein_id=YP_002403183.1;transl_table=11
NC_011748.1	RefSeq	gene	2176920	2177315	.	-	.	ID=gene2168;Name=EC55989_2131;Dbxref=GeneID:7145840;gbkey=Gene;locus_tag=EC55989_2131
NC_011748.1	RefSeq	CDS	2176920	2177315	.	-	0	ID=cds2039;Name=YP_002403184.1;Parent=gene2168;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002403184.1,GeneID:7145840;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403184.1;transl_table=11
NC_011748.1	RefSeq	gene	2177740	2177826	.	-	.	ID=gene2169;Name=EC55989_tRNA80;Dbxref=GeneID:7144707;gbkey=Gene;locus_tag=EC55989_tRNA80
NC_011748.1	RefSeq	tRNA	2177740	2177826	.	-	.	ID=rna79;Dbxref=GeneID:7144707;gbkey=tRNA;product=tRNA-Leu
NC_011748.1	RefSeq	exon	2177740	2177826	.	-	.	ID=id150;Parent=rna79;Dbxref=GeneID:7144707;gbkey=tRNA;product=tRNA-Leu
NC_011748.1	RefSeq	gene	2177839	2177912	.	-	.	ID=gene2170;Name=EC55989_tRNA79;Dbxref=GeneID:7145395;gbkey=Gene;locus_tag=EC55989_tRNA79
NC_011748.1	RefSeq	tRNA	2177839	2177912	.	-	.	ID=rna80;Dbxref=GeneID:7145395;gbkey=tRNA;product=tRNA-Cys
NC_011748.1	RefSeq	exon	2177839	2177912	.	-	.	ID=id151;Parent=rna80;Dbxref=GeneID:7145395;gbkey=tRNA;product=tRNA-Cys
NC_011748.1	RefSeq	gene	2177967	2178042	.	-	.	ID=gene2171;Name=EC55989_tRNA78;Dbxref=GeneID:7145393;gbkey=Gene;locus_tag=EC55989_tRNA78
NC_011748.1	RefSeq	tRNA	2177967	2178042	.	-	.	ID=rna81;Dbxref=GeneID:7145393;gbkey=tRNA;product=tRNA-Gly
NC_011748.1	RefSeq	exon	2177967	2178042	.	-	.	ID=id152;Parent=rna81;Dbxref=GeneID:7145393;gbkey=tRNA;product=tRNA-Gly
NC_011748.1	RefSeq	gene	2178194	2178742	.	-	.	ID=gene2172;Name=pgsA;Dbxref=GeneID:7145392;gbkey=Gene;gene=pgsA;locus_tag=EC55989_2132
NC_011748.1	RefSeq	CDS	2178194	2178742	.	-	0	ID=cds2040;Name=YP_002403185.1;Parent=gene2172;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 381294%2C 7007311%2C 94253011%2C 1323047%2C 3003065%2C 8917447%3B Product type e : enzyme;Dbxref=Genbank:YP_002403185.1,GeneID:7145392;gbkey=CDS;product=phosphatidylglycerophosphate synthetase;protein_id=YP_002403185.1;transl_table=11
NC_011748.1	RefSeq	gene	2178799	2180631	.	-	.	ID=gene2173;Name=uvrC;Dbxref=GeneID:7147156;gbkey=Gene;gene=uvrC;locus_tag=EC55989_2133
NC_011748.1	RefSeq	CDS	2178799	2180631	.	-	0	ID=cds2041;Name=YP_002403186.1;Parent=gene2173;Note=The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5%27 and 3%27 sides of the lesion. The N-terminal half is responsible for the 3%27 incision and the C-terminal half is responsible for the 5%27 incision;Dbxref=Genbank:YP_002403186.1,GeneID:7147156;gbkey=CDS;product=excinuclease ABC subunit C;protein_id=YP_002403186.1;transl_table=11
NC_011748.1	RefSeq	gene	2180628	2181284	.	-	.	ID=gene2174;Name=uvrY;Dbxref=GeneID:7147935;gbkey=Gene;gene=uvrY;locus_tag=EC55989_2134
NC_011748.1	RefSeq	CDS	2180628	2181284	.	-	0	ID=cds2042;Name=YP_002403187.1;Parent=gene2174;Note=in Escherichia coli the protein UvrY is part of a two-component system along with BarA that is needed for efficient switching between glycolytic and gluconeogenic carbon sources possibly by regulating the Csr system%3B in Salmonella SirA and BarA regulate virulence gene expression also via the Csr system;Dbxref=Genbank:YP_002403187.1,GeneID:7147935;gbkey=CDS;product=response regulator;protein_id=YP_002403187.1;transl_table=11
NC_011748.1	RefSeq	gene	2181580	2181756	.	+	.	ID=gene2175;Name=EC55989_2135;Dbxref=GeneID:7147937;gbkey=Gene;locus_tag=EC55989_2135
NC_011748.1	RefSeq	CDS	2181580	2181756	.	+	0	ID=cds2043;Name=YP_002403188.1;Parent=gene2175;Note=Evidence 6 : Doubtful CDS;Dbxref=Genbank:YP_002403188.1,GeneID:7147937;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403188.1;transl_table=11
NC_011748.1	RefSeq	gene	2181743	2181967	.	+	.	ID=gene2176;Name=yecF;Dbxref=GeneID:7144708;gbkey=Gene;gene=yecF;locus_tag=EC55989_2136
NC_011748.1	RefSeq	CDS	2181743	2181967	.	+	0	ID=cds2044;Name=YP_002403189.1;Parent=gene2176;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 3515318%2C 7567469;Dbxref=Genbank:YP_002403189.1,GeneID:7144708;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403189.1;transl_table=11
NC_011748.1	RefSeq	gene	2182035	2182757	.	-	.	ID=gene2177;Name=sdiA;Dbxref=GeneID:7148564;gbkey=Gene;gene=sdiA;locus_tag=EC55989_2137
NC_011748.1	RefSeq	CDS	2182035	2182757	.	-	0	ID=cds2045;Name=YP_002403190.1;Parent=gene2177;Note=regulates genes involved in cell division;Dbxref=Genbank:YP_002403190.1,GeneID:7148564;gbkey=CDS;product=DNA-binding transcriptional activator SdiA;protein_id=YP_002403190.1;transl_table=11
NC_011748.1	RefSeq	gene	2182987	2183739	.	-	.	ID=gene2178;Name=yecC;Dbxref=GeneID:7147619;gbkey=Gene;gene=yecC;locus_tag=EC55989_2138
NC_011748.1	RefSeq	CDS	2182987	2183739	.	-	0	ID=cds2046;Name=YP_002403191.1;Parent=gene2178;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002403191.1,GeneID:7147619;gbkey=CDS;product=amino-acid ABC transporter ATP-binding protein YecC;protein_id=YP_002403191.1;transl_table=11
NC_011748.1	RefSeq	gene	2183736	2184404	.	-	.	ID=gene2179;Name=yecS;Dbxref=GeneID:7148561;gbkey=Gene;gene=yecS;locus_tag=EC55989_2139
NC_011748.1	RefSeq	CDS	2183736	2184404	.	-	0	ID=cds2047;Name=YP_002403192.1;Parent=gene2179;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002403192.1,GeneID:7148561;gbkey=CDS;product=transporter subunit: permease component of ABC superfamily transporter;protein_id=YP_002403192.1;transl_table=11
NC_011748.1	RefSeq	gene	2184419	2185405	.	-	.	ID=gene2180;Name=yedO;Dbxref=GeneID:7148574;gbkey=Gene;gene=yedO;locus_tag=EC55989_2140
NC_011748.1	RefSeq	CDS	2184419	2185405	.	-	0	ID=cds2048;Name=YP_002403193.1;Parent=gene2180;Note=catalyzes the formation of pyruvate from D-cysteine;Dbxref=Genbank:YP_002403193.1,GeneID:7148574;gbkey=CDS;product=D-cysteine desulfhydrase;protein_id=YP_002403193.1;transl_table=11
NC_011748.1	RefSeq	gene	2185510	2186310	.	-	.	ID=gene2181;Name=fliY;Dbxref=GeneID:7148583;gbkey=Gene;gene=fliY;locus_tag=EC55989_2141
NC_011748.1	RefSeq	CDS	2185510	2186310	.	-	0	ID=cds2049;Name=YP_002403194.1;Parent=gene2181;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 96125225%2C 8450713%2C 8774726%2C 9298646%2C 9740056%3B Product type t : transporter;Dbxref=Genbank:YP_002403194.1,GeneID:7148583;gbkey=CDS;product=cystine transporter subunit;protein_id=YP_002403194.1;transl_table=11
NC_011748.1	RefSeq	gene	2186398	2186949	.	-	.	ID=gene2182;Name=fliZ;Dbxref=GeneID:7146160;gbkey=Gene;gene=fliZ;locus_tag=EC55989_2142
NC_011748.1	RefSeq	CDS	2186398	2186949	.	-	0	ID=cds2050;Name=YP_002403195.1;Parent=gene2182;Note=expression activator of the class 2 type of flagellar operons%2C essential to achieve maximal cell motility%3B activator of type 1 fimbrial gene expression%3B cell density-responsive regulator%3B FliZ in Salmonella typhimurium induces HilA%2C an activator of invasion genes necessary to achieve full virulence;Dbxref=Genbank:YP_002403195.1,GeneID:7146160;gbkey=CDS;product=flagella biosynthesis protein FliZ;protein_id=YP_002403195.1;transl_table=11
NC_011748.1	RefSeq	gene	2186995	2187714	.	-	.	ID=gene2183;Name=fliA;Dbxref=GeneID:7146161;gbkey=Gene;gene=fliA;locus_tag=EC55989_2143
NC_011748.1	RefSeq	CDS	2186995	2187714	.	-	0	ID=cds2051;Name=YP_002403196.1;Parent=gene2183;Note=sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released%3B this sigma factor directs late flagellar biosynthesis genes;Dbxref=Genbank:YP_002403196.1,GeneID:7146161;gbkey=CDS;product=flagellar biosynthesis sigma factor;protein_id=YP_002403196.1;transl_table=11
NC_011748.1	RefSeq	gene	2187878	2188927	.	-	.	ID=gene2184;Name=EC55989_2144;Dbxref=GeneID:7146143;gbkey=Gene;locus_tag=EC55989_2144
NC_011748.1	RefSeq	CDS	2187878	2188927	.	-	0	ID=cds2052;Name=YP_002403197.1;Parent=gene2184;Note=Evidence 2b : Function of strongly homologous gene%3B Product type ps :  structure;Dbxref=Genbank:YP_002403197.1,GeneID:7146143;gbkey=CDS;product=Flagellin;protein_id=YP_002403197.1;transl_table=11
NC_011748.1	RefSeq	gene	2189175	2190590	.	+	.	ID=gene2185;Name=fliD;Dbxref=GeneID:7144709;gbkey=Gene;gene=fliD;locus_tag=EC55989_2145
NC_011748.1	RefSeq	CDS	2189175	2190590	.	+	0	ID=cds2053;Name=YP_002403198.1;Parent=gene2185;Note=involved in flagellin assembly;Dbxref=Genbank:YP_002403198.1,GeneID:7144709;gbkey=CDS;product=flagellar capping protein;protein_id=YP_002403198.1;transl_table=11
NC_011748.1	RefSeq	gene	2190606	2191016	.	+	.	ID=gene2186;Name=fliS;Dbxref=GeneID:7144710;gbkey=Gene;gene=fliS;locus_tag=EC55989_2146
NC_011748.1	RefSeq	CDS	2190606	2191016	.	+	0	ID=cds2054;Name=YP_002403199.1;Parent=gene2186;Note=flagellin specific chaperone;Dbxref=Genbank:YP_002403199.1,GeneID:7144710;gbkey=CDS;product=flagellar protein FliS;protein_id=YP_002403199.1;transl_table=11
NC_011748.1	RefSeq	gene	2191016	2191381	.	+	.	ID=gene2187;Name=fliT;Dbxref=GeneID:7146158;gbkey=Gene;gene=fliT;locus_tag=EC55989_2147
NC_011748.1	RefSeq	CDS	2191016	2191381	.	+	0	ID=cds2055;Name=YP_002403200.1;Parent=gene2187;Note=binds flagellar cap subunits %28FliD%29 and seems to prevents their oligomerization prior to its translocation through the flagellum-specific type III export pathway%3B acts as a repressor of flagellar class 2 operons by preventing FlhD2C2 to bind the promoter and inhibiting the FlhD2C2-dependent transcription%3B member of the type III cytoplasmic chaperone family;Dbxref=Genbank:YP_002403200.1,GeneID:7146158;gbkey=CDS;product=flagellar biosynthesis protein FliT;protein_id=YP_002403200.1;transl_table=11
NC_011748.1	RefSeq	gene	2191459	2192946	.	+	.	ID=gene2188;Name=amyA;Dbxref=GeneID:7146159;gbkey=Gene;gene=amyA;locus_tag=EC55989_2148
NC_011748.1	RefSeq	CDS	2191459	2192946	.	+	0	ID=cds2056;Name=YP_002403201.1;Parent=gene2188;Note=converts 1%2C4-alpha-D-glucans to maltodextrin;Dbxref=Genbank:YP_002403201.1,GeneID:7146159;gbkey=CDS;product=alpha-amylase;protein_id=YP_002403201.1;transl_table=11
NC_011748.1	RefSeq	gene	2192980	2193393	.	-	.	ID=gene2189;Name=yedD;Dbxref=GeneID:7145500;gbkey=Gene;gene=yedD;locus_tag=EC55989_2149
NC_011748.1	RefSeq	CDS	2192980	2193393	.	-	0	ID=cds2057;Name=YP_002403202.1;Parent=gene2189;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403202.1,GeneID:7145500;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403202.1;transl_table=11
NC_011748.1	RefSeq	gene	2193580	2194785	.	+	.	ID=gene2190;Name=yedE;Dbxref=GeneID:7148577;gbkey=Gene;gene=yedE;locus_tag=EC55989_2150
NC_011748.1	RefSeq	CDS	2193580	2194785	.	+	0	ID=cds2058;Name=YP_002403203.1;Parent=gene2190;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002403203.1,GeneID:7148577;gbkey=CDS;product=inner membrane protein;protein_id=YP_002403203.1;transl_table=11
NC_011748.1	RefSeq	gene	2194782	2195015	.	+	.	ID=gene2191;Name=yedF;Dbxref=GeneID:7148578;gbkey=Gene;gene=yedF;locus_tag=EC55989_2151
NC_011748.1	RefSeq	CDS	2194782	2195015	.	+	0	ID=cds2059;Name=YP_002403204.1;Parent=gene2191;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403204.1,GeneID:7148578;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403204.1;transl_table=11
NC_011748.1	RefSeq	gene	2195124	2195621	.	+	.	ID=gene2192;Name=yedK;Dbxref=GeneID:7148579;gbkey=Gene;gene=yedK;locus_tag=EC55989_2152;pseudo=true
NC_011748.1	RefSeq	region	2195124	2195621	.	+	.	ID=id153;Note=fragment of conserved hypothetical protein %28partial%29%3BEvidence 7 : Gene remnant;Dbxref=GeneID:7148579;gbkey=misc_feature
NC_011748.1	RefSeq	gene	2195810	2196379	.	+	.	ID=gene2193;Name=EC55989_2153;Dbxref=GeneID:7148582;gbkey=Gene;locus_tag=EC55989_2153
NC_011748.1	RefSeq	CDS	2195810	2196379	.	+	0	ID=cds2060;Name=YP_002403205.1;Parent=gene2193;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002403205.1,GeneID:7148582;gbkey=CDS;product=transposase ORF A%2C IS609 family;protein_id=YP_002403205.1;transl_table=11
NC_011748.1	RefSeq	gene	2196536	2197333	.	-	.	ID=gene2194;Name=ybcM;Dbxref=GeneID:7144711;gbkey=Gene;gene=ybcM;locus_tag=EC55989_2154
NC_011748.1	RefSeq	CDS	2196536	2197333	.	-	0	ID=cds2061;Name=YP_002403206.1;Parent=gene2194;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 12270809%3B Product type pr :  regulator;Dbxref=Genbank:YP_002403206.1,GeneID:7144711;gbkey=CDS;product=DNA-binding transcriptional regulator%3B DLP12 prophage;protein_id=YP_002403206.1;transl_table=11
NC_011748.1	RefSeq	gene	2197343	2197894	.	-	.	ID=gene2195;Name=ybcL;Dbxref=GeneID:7148131;gbkey=Gene;gene=ybcL;locus_tag=EC55989_2155
NC_011748.1	RefSeq	CDS	2197343	2197894	.	-	0	ID=cds2062;Name=YP_002403207.1;Parent=gene2195;Note=DLP12 prophage%3B similar to PEBP%2FRK1P protein family in eukaryotes that inhibits MEK phosphorylation by Raf-1%3B crystal structure suggests similar properties but exact function is unknown;Dbxref=Genbank:YP_002403207.1,GeneID:7148131;gbkey=CDS;product=kinase inhibitor;protein_id=YP_002403207.1;transl_table=11
NC_011748.1	RefSeq	gene	2198063	2198575	.	-	.	ID=gene2196;Name=emrE;Dbxref=GeneID:7148130;gbkey=Gene;gene=emrE;locus_tag=EC55989_2156
NC_011748.1	RefSeq	CDS	2198063	2198575	.	-	0	ID=cds2063;Name=YP_002403208.1;Parent=gene2196;Note=member of the small MDR %28multidrug resistance%29 family of transporters%3B in Escherichia coli this protein provides resistance against a number of positively charged compounds including ethidium bromide and erythromycin%3B proton-dependent secondary transporter which exchanges protons for compound translocation;Dbxref=Genbank:YP_002403208.1,GeneID:7148130;gbkey=CDS;product=multidrug efflux protein;protein_id=YP_002403208.1;transl_table=11
NC_011748.1	RefSeq	gene	2198739	2199053	.	-	.	ID=gene2197;Name=fliE;Dbxref=GeneID:7145993;gbkey=Gene;gene=fliE;locus_tag=EC55989_2157
NC_011748.1	RefSeq	CDS	2198739	2199053	.	-	0	ID=cds2064;Name=YP_002403209.1;Parent=gene2197;Note=forms a junction between the M-ring and FlgB during flagella biosynthesis;Dbxref=Genbank:YP_002403209.1,GeneID:7145993;gbkey=CDS;product=flagellar hook-basal body protein FliE;protein_id=YP_002403209.1;transl_table=11
NC_011748.1	RefSeq	gene	2199268	2200926	.	+	.	ID=gene2198;Name=fliF;Dbxref=GeneID:7146144;gbkey=Gene;gene=fliF;locus_tag=EC55989_2158
NC_011748.1	RefSeq	CDS	2199268	2200926	.	+	0	ID=cds2065;Name=YP_002403210.1;Parent=gene2198;Note=the MS-ring anchors the flagellum to the cytoplasmic membrane%3B part of the flagellar basal body which consists of four rings L%2C P%2C S%2C and M mounted on a central rod;Dbxref=Genbank:YP_002403210.1,GeneID:7146144;gbkey=CDS;product=flagellar MS-ring protein;protein_id=YP_002403210.1;transl_table=11
NC_011748.1	RefSeq	gene	2200919	2201914	.	+	.	ID=gene2199;Name=fliG;Dbxref=GeneID:7146145;gbkey=Gene;gene=fliG;locus_tag=EC55989_2159
NC_011748.1	RefSeq	CDS	2200919	2201914	.	+	0	ID=cds2066;Name=YP_002403211.1;Parent=gene2199;Note=One of three proteins involved in switching the direction of the flagellar rotation;Dbxref=Genbank:YP_002403211.1,GeneID:7146145;gbkey=CDS;product=flagellar motor switch protein G;protein_id=YP_002403211.1;transl_table=11
NC_011748.1	RefSeq	gene	2201907	2202593	.	+	.	ID=gene2200;Name=fliH;Dbxref=GeneID:7146146;gbkey=Gene;gene=fliH;locus_tag=EC55989_2160
NC_011748.1	RefSeq	CDS	2201907	2202593	.	+	0	ID=cds2067;Name=YP_002403212.1;Parent=gene2200;Note=binds to and inhibits the function of flagella specific ATPase FliI;Dbxref=Genbank:YP_002403212.1,GeneID:7146146;gbkey=CDS;product=flagellar assembly protein H;protein_id=YP_002403212.1;transl_table=11
NC_011748.1	RefSeq	gene	2202593	2203966	.	+	.	ID=gene2201;Name=fliI;Dbxref=GeneID:7146147;gbkey=Gene;gene=fliI;locus_tag=EC55989_2161
NC_011748.1	RefSeq	CDS	2202593	2203966	.	+	0	ID=cds2068;Name=YP_002403213.1;Parent=gene2201;Note=involved in type III protein export during flagellum assembly;Dbxref=Genbank:YP_002403213.1,GeneID:7146147;gbkey=CDS;product=flagellum-specific ATP synthase;protein_id=YP_002403213.1;transl_table=11
NC_011748.1	RefSeq	gene	2203985	2204428	.	+	.	ID=gene2202;Name=fliJ;Dbxref=GeneID:7146148;gbkey=Gene;gene=fliJ;locus_tag=EC55989_2162
NC_011748.1	RefSeq	CDS	2203985	2204428	.	+	0	ID=cds2069;Name=YP_002403214.1;Parent=gene2202;Note=rod%2Fhook and filament chaperone;Dbxref=Genbank:YP_002403214.1,GeneID:7146148;gbkey=CDS;product=flagellar biosynthesis chaperone;protein_id=YP_002403214.1;transl_table=11
NC_011748.1	RefSeq	gene	2204425	2205552	.	+	.	ID=gene2203;Name=fliK;Dbxref=GeneID:7146149;gbkey=Gene;gene=fliK;locus_tag=EC55989_2163
NC_011748.1	RefSeq	CDS	2204425	2205552	.	+	0	ID=cds2070;Name=YP_002403215.1;Parent=gene2203;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 1482109%2C 8631687%3B Product type s : structure;Dbxref=Genbank:YP_002403215.1,GeneID:7146149;gbkey=CDS;product=flagellar hook-length control protein;protein_id=YP_002403215.1;transl_table=11
NC_011748.1	RefSeq	gene	2205657	2206121	.	+	.	ID=gene2204;Name=fliL;Dbxref=GeneID:7146150;gbkey=Gene;gene=fliL;locus_tag=EC55989_2164
NC_011748.1	RefSeq	CDS	2205657	2206121	.	+	0	ID=cds2071;Name=YP_002403216.1;Parent=gene2204;Note=interacts with cytoplasmic MS ring of the basal body and may act to stabilize the MotAB complexes which surround the MS ring;Dbxref=Genbank:YP_002403216.1,GeneID:7146150;gbkey=CDS;product=flagellar basal body-associated protein FliL;protein_id=YP_002403216.1;transl_table=11
NC_011748.1	RefSeq	gene	2206126	2207130	.	+	.	ID=gene2205;Name=fliM;Dbxref=GeneID:7146151;gbkey=Gene;gene=fliM;locus_tag=EC55989_2165
NC_011748.1	RefSeq	CDS	2206126	2207130	.	+	0	ID=cds2072;Name=YP_002403217.1;Parent=gene2205;Note=with FliG and FliN makes up the switch complex which is involved in switching the direction of the flagella rotation;Dbxref=Genbank:YP_002403217.1,GeneID:7146151;gbkey=CDS;product=flagellar motor switch protein FliM;protein_id=YP_002403217.1;transl_table=11
NC_011748.1	RefSeq	gene	2207127	2207540	.	+	.	ID=gene2206;Name=fliN;Dbxref=GeneID:7146152;gbkey=Gene;gene=fliN;locus_tag=EC55989_2166
NC_011748.1	RefSeq	CDS	2207127	2207540	.	+	0	ID=cds2073;Name=YP_002403218.1;Parent=gene2206;Note=One of three proteins involved in switching the direction of the flagellar rotation;Dbxref=Genbank:YP_002403218.1,GeneID:7146152;gbkey=CDS;product=flagellar motor switch protein FliN;protein_id=YP_002403218.1;transl_table=11
NC_011748.1	RefSeq	gene	2207543	2207908	.	+	.	ID=gene2207;Name=fliO;Dbxref=GeneID:7146153;gbkey=Gene;gene=fliO;locus_tag=EC55989_2167
NC_011748.1	RefSeq	CDS	2207543	2207908	.	+	0	ID=cds2074;Name=YP_002403219.1;Parent=gene2207;Note=with FlhA%2C FlhB%2C FliP%2C FliQ and FliR is one of the membrane components of the flagellar export apparatus;Dbxref=Genbank:YP_002403219.1,GeneID:7146153;gbkey=CDS;product=flagellar biosynthesis protein FliO;protein_id=YP_002403219.1;transl_table=11
NC_011748.1	RefSeq	gene	2207908	2208645	.	+	.	ID=gene2208;Name=fliP;Dbxref=GeneID:7146154;gbkey=Gene;gene=fliP;locus_tag=EC55989_2168
NC_011748.1	RefSeq	CDS	2207908	2208645	.	+	0	ID=cds2075;Name=YP_002403220.1;Parent=gene2208;Note=FliP%2C with proteins FliQ and FliR%2C forms the core of the central channel in the flagella export apparatus;Dbxref=Genbank:YP_002403220.1,GeneID:7146154;gbkey=CDS;product=flagellar biosynthesis protein FliP;protein_id=YP_002403220.1;transl_table=11
NC_011748.1	RefSeq	gene	2208655	2208924	.	+	.	ID=gene2209;Name=fliQ;Dbxref=GeneID:7146155;gbkey=Gene;gene=fliQ;locus_tag=EC55989_2169
NC_011748.1	RefSeq	CDS	2208655	2208924	.	+	0	ID=cds2076;Name=YP_002403221.1;Parent=gene2209;Note=with proteins FliP and FliR forms the core of the central channel in the flagella export apparatus;Dbxref=Genbank:YP_002403221.1,GeneID:7146155;gbkey=CDS;product=flagellar biosynthesis protein FliQ;protein_id=YP_002403221.1;transl_table=11
NC_011748.1	RefSeq	gene	2208933	2209718	.	+	.	ID=gene2210;Name=fliR;Dbxref=GeneID:7146156;gbkey=Gene;gene=fliR;locus_tag=EC55989_2170
NC_011748.1	RefSeq	CDS	2208933	2209718	.	+	0	ID=cds2077;Name=YP_002403222.1;Parent=gene2210;Note=FliR%2C with proteins FliP and FliQ%2C forms the core of the central channel in the flagella export apparatus;Dbxref=Genbank:YP_002403222.1,GeneID:7146156;gbkey=CDS;product=flagellar biosynthesis protein FliR;protein_id=YP_002403222.1;transl_table=11
NC_011748.1	RefSeq	gene	2210008	2210631	.	+	.	ID=gene2211;Name=rcsA;Dbxref=GeneID:7146157;gbkey=Gene;gene=rcsA;locus_tag=EC55989_2171
NC_011748.1	RefSeq	CDS	2210008	2210631	.	+	0	ID=cds2078;Name=YP_002403223.1;Parent=gene2211;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 14514676%2C 14766922%2C 20167175%2C 90130299%2C 91154130%2C 92048476%2C 9882673%2C 7534408%3B Product type r : regulator;Dbxref=Genbank:YP_002403223.1,GeneID:7146157;gbkey=CDS;product=DNA-binding transcriptional activator%2C co-regulator with RcsB;protein_id=YP_002403223.1;transl_table=11
NC_011748.1	RefSeq	gene	2210675	2210863	.	-	.	ID=gene2212;Name=dsrB;Dbxref=GeneID:7147347;gbkey=Gene;gene=dsrB;locus_tag=EC55989_2172
NC_011748.1	RefSeq	CDS	2210675	2210863	.	-	0	ID=cds2079;Name=YP_002403224.1;Parent=gene2212;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 96324407%2C 7534408;Dbxref=Genbank:YP_002403224.1,GeneID:7147347;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403224.1;transl_table=11
NC_011748.1	RefSeq	gene	2210677	2210883	.	-	.	ID=gene2213;Name=dsrB;Dbxref=GeneID:7145957;gbkey=Gene;gene=dsrB;locus_tag=EC55989_misc_RNA_43
NC_011748.1	RefSeq	transcript	2210677	2210883	.	-	.	ID=rna82;Parent=gene2213;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 8670904%3B Product type n : RNA;Dbxref=GeneID:7145957;gbkey=misc_RNA;product=DsrB
NC_011748.1	RefSeq	exon	2210677	2210883	.	-	.	ID=id154;Parent=rna82;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 8670904%3B Product type n : RNA;Dbxref=GeneID:7145957;gbkey=misc_RNA;product=DsrB
NC_011748.1	RefSeq	gene	2211026	2211253	.	+	.	ID=gene2214;Name=yodD;Dbxref=GeneID:7145958;gbkey=Gene;gene=yodD;locus_tag=EC55989_2173
NC_011748.1	RefSeq	CDS	2211026	2211253	.	+	0	ID=cds2080;Name=YP_002403225.1;Parent=gene2214;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403225.1,GeneID:7145958;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403225.1;transl_table=11
NC_011748.1	RefSeq	gene	2211267	2211353	.	-	.	ID=gene2215;Name=dsrA;Dbxref=GeneID:7149348;gbkey=Gene;gene=dsrA;locus_tag=EC55989_misc_RNA_44
NC_011748.1	RefSeq	transcript	2211267	2211353	.	-	.	ID=rna83;Parent=gene2215;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 12753181%3B Product type n : RNA;Dbxref=GeneID:7149348;gbkey=misc_RNA;product=DsrA
NC_011748.1	RefSeq	exon	2211267	2211353	.	-	.	ID=id155;Parent=rna83;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 12753181%3B Product type n : RNA;Dbxref=GeneID:7149348;gbkey=misc_RNA;product=DsrA
NC_011748.1	RefSeq	gene	2211552	2212367	.	+	.	ID=gene2216;Name=yedP;Dbxref=GeneID:7145956;gbkey=Gene;gene=yedP;locus_tag=EC55989_2174
NC_011748.1	RefSeq	CDS	2211552	2212367	.	+	0	ID=cds2081;Name=YP_002403226.1;Parent=gene2216;Note=catalyzes the hydrolysis of mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate;Dbxref=Genbank:YP_002403226.1,GeneID:7145956;gbkey=CDS;product=mannosyl-3-phosphoglycerate phosphatase;protein_id=YP_002403226.1;transl_table=11
NC_011748.1	RefSeq	gene	2212364	2213119	.	-	.	ID=gene2217;Name=yedQ;Dbxref=GeneID:7148584;gbkey=Gene;gene=yedQ;locus_tag=EC55989_2175;pseudo=true
NC_011748.1	RefSeq	region	2212364	2213119	.	-	.	ID=id156;Note=fragment of  diguanylate cyclase %28part 2%29%3BEvidence 7 : Gene remnant%3B Product type pe :  enzyme;Dbxref=GeneID:7148584;gbkey=misc_feature
NC_011748.1	RefSeq	gene	2213123	2214058	.	-	.	ID=gene2218;Name=yedQ;Dbxref=GeneID:7148585;gbkey=Gene;gene=yedQ;locus_tag=EC55989_2176;pseudo=true
NC_011748.1	RefSeq	region	2213123	2214058	.	-	.	ID=id157;Note=fragment of  diguanylate cyclase %28part 1%29%3BEvidence 7 : Gene remnant%3B Product type pe :  enzyme;Dbxref=GeneID:7148585;gbkey=misc_feature
NC_011748.1	RefSeq	gene	2213979	2214167	.	-	.	ID=gene2219;Name=EC55989_2177;Dbxref=GeneID:7148586;gbkey=Gene;locus_tag=EC55989_2177
NC_011748.1	RefSeq	CDS	2213979	2214167	.	-	0	ID=cds2082;Name=YP_002403227.1;Parent=gene2219;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403227.1,GeneID:7148586;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403227.1;transl_table=11
NC_011748.1	RefSeq	gene	2214229	2214411	.	-	.	ID=gene2220;Name=yodC;Dbxref=GeneID:7144712;gbkey=Gene;gene=yodC;locus_tag=EC55989_2178
NC_011748.1	RefSeq	CDS	2214229	2214411	.	-	0	ID=cds2083;Name=YP_002403228.1;Parent=gene2220;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403228.1,GeneID:7144712;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403228.1;transl_table=11
NC_011748.1	RefSeq	gene	2214490	2215407	.	-	.	ID=gene2221;Name=yedI;Dbxref=GeneID:7149347;gbkey=Gene;gene=yedI;locus_tag=EC55989_2179
NC_011748.1	RefSeq	CDS	2214490	2215407	.	-	0	ID=cds2084;Name=YP_002403229.1;Parent=gene2221;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002403229.1,GeneID:7149347;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403229.1;transl_table=11
NC_011748.1	RefSeq	gene	2215580	2216500	.	+	.	ID=gene2222;Name=yedA;Dbxref=GeneID:7148580;gbkey=Gene;gene=yedA;locus_tag=EC55989_2180
NC_011748.1	RefSeq	CDS	2215580	2216500	.	+	0	ID=cds2085;Name=YP_002403230.1;Parent=gene2222;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002403230.1,GeneID:7148580;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403230.1;transl_table=11
NC_011748.1	RefSeq	gene	2216489	2216959	.	-	.	ID=gene2223;Name=vsr;Dbxref=GeneID:7148576;gbkey=Gene;gene=vsr;locus_tag=EC55989_2181
NC_011748.1	RefSeq	CDS	2216489	2216959	.	-	0	ID=cds2086;Name=YP_002403231.1;Parent=gene2223;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 90330522%2C 92049708%2C 94049122%2C 10360178%2C 10612397%2C 10871403%2C 2527357%3B Product type e : enzyme;Dbxref=Genbank:YP_002403231.1,GeneID:7148576;gbkey=CDS;product=DNA mismatch endonuclease of very short patch repair;protein_id=YP_002403231.1;transl_table=11
NC_011748.1	RefSeq	gene	2216940	2218358	.	-	.	ID=gene2224;Name=dcm;Dbxref=GeneID:7147953;gbkey=Gene;gene=dcm;locus_tag=EC55989_2182
NC_011748.1	RefSeq	CDS	2216940	2218358	.	-	0	ID=cds2087;Name=YP_002403232.1;Parent=gene2224;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 90280700%2C 91285397%2C 93367813%2C 2198248%2C 2527357%3B Product type e : enzyme;Dbxref=Genbank:YP_002403232.1,GeneID:7147953;gbkey=CDS;product=DNA cytosine methylase;protein_id=YP_002403232.1;transl_table=11
NC_011748.1	RefSeq	gene	2218425	2219120	.	-	.	ID=gene2225;Name=yedJ;Dbxref=GeneID:7145856;gbkey=Gene;gene=yedJ;locus_tag=EC55989_2183
NC_011748.1	RefSeq	CDS	2218425	2219120	.	-	0	ID=cds2088;Name=YP_002403233.1;Parent=gene2225;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 7567469%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002403233.1,GeneID:7145856;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403233.1;transl_table=11
NC_011748.1	RefSeq	gene	2219160	2219525	.	-	.	ID=gene2226;Name=yedR;Dbxref=GeneID:7148581;gbkey=Gene;gene=yedR;locus_tag=EC55989_2184
NC_011748.1	RefSeq	CDS	2219160	2219525	.	-	0	ID=cds2089;Name=YP_002403234.1;Parent=gene2226;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002403234.1,GeneID:7148581;gbkey=CDS;product=inner membrane protein;protein_id=YP_002403234.1;transl_table=11
NC_011748.1	RefSeq	gene	2219690	2219779	.	+	.	ID=gene2227;Name=rseX;Dbxref=GeneID:7148587;gbkey=Gene;gene=rseX;locus_tag=EC55989_misc_RNA_45
NC_011748.1	RefSeq	transcript	2219690	2219779	.	+	.	ID=rna84;Parent=gene2227;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 16513633%3B Product type n : RNA;Dbxref=GeneID:7148587;gbkey=misc_RNA;product=RseX
NC_011748.1	RefSeq	exon	2219690	2219779	.	+	.	ID=id158;Parent=rna84;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 16513633%3B Product type n : RNA;Dbxref=GeneID:7148587;gbkey=misc_RNA;product=RseX
NC_011748.1	RefSeq	gene	2220021	2220482	.	+	.	ID=gene2228;Name=EC55989_2185;Dbxref=GeneID:7147533;gbkey=Gene;locus_tag=EC55989_2185;pseudo=true
NC_011748.1	RefSeq	region	2220021	2220482	.	+	.	ID=id159;Note=fragment of  outer membrane protein yedS precursor %28part 1%29%3BEvidence 7 : Gene remnant%3B Product type pm :  membrane component;Dbxref=GeneID:7147533;gbkey=misc_feature
NC_011748.1	RefSeq	gene	2220476	2221150	.	+	.	ID=gene2229;Name=EC55989_2186;Dbxref=GeneID:7144713;gbkey=Gene;locus_tag=EC55989_2186;pseudo=true
NC_011748.1	RefSeq	region	2220476	2221150	.	+	.	ID=id160;Note=fragment of  outer membrane protein yedS precursor %28part 2%29%3BEvidence 7 : Gene remnant%3B Product type pm :  membrane component;Dbxref=GeneID:7144713;gbkey=misc_feature
NC_011748.1	RefSeq	gene	2221202	2221552	.	+	.	ID=gene2230;Name=insM;Dbxref=GeneID:7144714;gbkey=Gene;gene=insM;locus_tag=EC55989_2187;pseudo=true
NC_011748.1	RefSeq	region	2221202	2221552	.	+	.	ID=id161;Note=fragment of transposase ORF A%2C IS600 %28partial%29%3BEvidence 7 : Gene remnant%3B Product type pe :  enzyme;Dbxref=GeneID:7144714;gbkey=misc_feature
NC_011748.1	RefSeq	gene	2221472	2222623	.	-	.	ID=gene2231;Name=insI;Dbxref=GeneID:7146599;gbkey=Gene;gene=insI;locus_tag=EC55989_2188
NC_011748.1	RefSeq	CDS	2221472	2222623	.	-	0	ID=cds2090;Name=YP_002403235.1;Parent=gene2231;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 9689094%2C 6092059%3B Product type e : enzyme;Dbxref=Genbank:YP_002403235.1,GeneID:7146599;gbkey=CDS;product=IS30 transposase%3B KpLE2 phage-like element;protein_id=YP_002403235.1;transl_table=11
NC_011748.1	RefSeq	gene	2222076	2222120	.	+	.	ID=gene2232;Name=RNAC;Dbxref=GeneID:7146596;gbkey=Gene;gene=RNAC;locus_tag=EC55989_misc_RNA_46
NC_011748.1	RefSeq	transcript	2222076	2222120	.	+	.	ID=rna85;Parent=gene2232;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 9461341%3B Product type n : RNA;Dbxref=GeneID:7146596;gbkey=misc_RNA;product=RNAC
NC_011748.1	RefSeq	exon	2222076	2222120	.	+	.	ID=id162;Parent=rna85;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 9461341%3B Product type n : RNA;Dbxref=GeneID:7146596;gbkey=misc_RNA;product=RNAC
NC_011748.1	RefSeq	gene	2222763	2223581	.	+	.	ID=gene2233;Name=EC55989_2189;Dbxref=GeneID:7147434;gbkey=Gene;locus_tag=EC55989_2189
NC_011748.1	RefSeq	CDS	2222763	2223581	.	+	0	ID=cds2091;Name=YP_002403236.1;Parent=gene2233;Note=Evidence 2b : Function of strongly homologous gene%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002403236.1,GeneID:7147434;gbkey=CDS;product=transposase ORF B%2C IS600;protein_id=YP_002403236.1;transl_table=11
NC_011748.1	RefSeq	gene	2224087	2224590	.	-	.	ID=gene2234;Name=insB;Dbxref=GeneID:7144715;gbkey=Gene;gene=insB;locus_tag=EC55989_2191
NC_011748.1	RefSeq	CDS	2224087	2224590	.	-	0	ID=cds2092;Name=YP_002403237.1;Parent=gene2234;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 9689094%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002403237.1,GeneID:7144715;gbkey=CDS;product=IS1 transposase InsAB%27;protein_id=YP_002403237.1;transl_table=11
NC_011748.1	RefSeq	gene	2224509	2224784	.	-	.	ID=gene2235;Name=insA;Dbxref=GeneID:7146588;gbkey=Gene;gene=insA;locus_tag=EC55989_2192
NC_011748.1	RefSeq	CDS	2224509	2224784	.	-	0	ID=cds2093;Name=YP_002403238.1;Parent=gene2235;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 9689094%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002403238.1,GeneID:7146588;gbkey=CDS;product=IS1 repressor protein InsA;protein_id=YP_002403238.1;transl_table=11
NC_011748.1	RefSeq	gene	2224870	2225721	.	+	.	ID=gene2236;Name=hchA;Dbxref=GeneID:7146576;gbkey=Gene;gene=hchA;locus_tag=EC55989_2193
NC_011748.1	RefSeq	CDS	2224870	2225721	.	+	0	ID=cds2094;Name=YP_002403239.1;Parent=gene2236;Note=Hsp31 stabilizes early unfolding protein intermediates under severe heat stress;Dbxref=Genbank:YP_002403239.1,GeneID:7146576;gbkey=CDS;product=chaperone protein HchA;protein_id=YP_002403239.1;transl_table=11
NC_011748.1	RefSeq	gene	2225819	2227177	.	-	.	ID=gene2237;Name=yedV;Dbxref=GeneID:7146397;gbkey=Gene;gene=yedV;locus_tag=EC55989_2194
NC_011748.1	RefSeq	CDS	2225819	2227177	.	-	0	ID=cds2095;Name=YP_002403240.1;Parent=gene2237;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 15522865%3B Product type rc : receptor;Dbxref=Genbank:YP_002403240.1,GeneID:7146397;gbkey=CDS;product=sensory kinase in two-component regulatory system with YedW;protein_id=YP_002403240.1;transl_table=11
NC_011748.1	RefSeq	gene	2227177	2227848	.	-	.	ID=gene2238;Name=yedW;Dbxref=GeneID:7148588;gbkey=Gene;gene=yedW;locus_tag=EC55989_2195
NC_011748.1	RefSeq	CDS	2227177	2227848	.	-	0	ID=cds2096;Name=YP_002403241.1;Parent=gene2238;Note=induced by CusR in the presence of copper%3B YedW induces the expression of the upstream gene yedV %28encoding a sensor kinase%29 as well as yedW%3B yedVW is one of four copper regulons found in E. coli%3B part of the copper homeostasis mechanism%3B confers resistance to copper and several drugs when induced;Dbxref=Genbank:YP_002403241.1,GeneID:7148588;gbkey=CDS;product=transcriptional regulatory protein YedW;protein_id=YP_002403241.1;transl_table=11
NC_011748.1	RefSeq	gene	2227981	2228394	.	+	.	ID=gene2239;Name=yedX;Dbxref=GeneID:7148589;gbkey=Gene;gene=yedX;locus_tag=EC55989_2196
NC_011748.1	RefSeq	CDS	2227981	2228394	.	+	0	ID=cds2097;Name=YP_002403242.1;Parent=gene2239;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403242.1,GeneID:7148589;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403242.1;transl_table=11
NC_011748.1	RefSeq	gene	2228503	2229507	.	+	.	ID=gene2240;Name=yedY;Dbxref=GeneID:7148590;gbkey=Gene;gene=yedY;locus_tag=EC55989_2197
NC_011748.1	RefSeq	CDS	2228503	2229507	.	+	0	ID=cds2098;Name=YP_002403243.1;Parent=gene2240;Note=in Escherichia coli this periplasmic enzyme was found to encode the periplasmic catalytic subunit of an oxidoreductase%3B sulfite oxidase activity not demonstrated%3B requires inner membrane anchor protein YedZ;Dbxref=Genbank:YP_002403243.1,GeneID:7148590;gbkey=CDS;product=sulfite oxidase subunit YedY;protein_id=YP_002403243.1;transl_table=11
NC_011748.1	RefSeq	gene	2229508	2230143	.	+	.	ID=gene2241;Name=yedZ;Dbxref=GeneID:7148591;gbkey=Gene;gene=yedZ;locus_tag=EC55989_2198
NC_011748.1	RefSeq	CDS	2229508	2230143	.	+	0	ID=cds2099;Name=YP_002403244.1;Parent=gene2241;Note=in Escherichia coli this inner membrane protein was found to anchor the periplasmic catalytic oxidoreductase YedY%3B sulfite oxidase activity not demonstrated%3B contains heme;Dbxref=Genbank:YP_002403244.1,GeneID:7148591;gbkey=CDS;product=sulfite oxidase subunit YedZ;protein_id=YP_002403244.1;transl_table=11
NC_011748.1	RefSeq	gene	2230400	2231050	.	+	.	ID=gene2242;Name=yodA;Dbxref=GeneID:7148592;gbkey=Gene;gene=yodA;locus_tag=EC55989_2199
NC_011748.1	RefSeq	CDS	2230400	2231050	.	+	0	ID=cds2100;Name=YP_002403245.1;Parent=gene2242;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 12077457%2C 12480884%2C 12909634%2C 9579078;Dbxref=Genbank:YP_002403245.1,GeneID:7148592;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403245.1;transl_table=11
NC_011748.1	RefSeq	gene	2231720	2231809	.	-	.	ID=gene2243;Name=EC55989_tRNA77;Dbxref=GeneID:7149346;gbkey=Gene;locus_tag=EC55989_tRNA77
NC_011748.1	RefSeq	tRNA	2231720	2231809	.	-	.	ID=rna86;Dbxref=GeneID:7149346;gbkey=tRNA;product=tRNA-Ser
NC_011748.1	RefSeq	exon	2231720	2231809	.	-	.	ID=id163;Parent=rna86;Dbxref=GeneID:7149346;gbkey=tRNA;product=tRNA-Ser
NC_011748.1	RefSeq	gene	2231903	2232700	.	+	.	ID=gene2244;Name=yeeI;Dbxref=GeneID:7145391;gbkey=Gene;gene=yeeI;locus_tag=EC55989_2200
NC_011748.1	RefSeq	CDS	2231903	2232700	.	+	0	ID=cds2101;Name=YP_002403246.1;Parent=gene2244;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403246.1,GeneID:7145391;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403246.1;transl_table=11
NC_011748.1	RefSeq	gene	2232801	2232876	.	+	.	ID=gene2245;Name=EC55989_tRNA22;Dbxref=GeneID:7148597;gbkey=Gene;locus_tag=EC55989_tRNA22
NC_011748.1	RefSeq	tRNA	2232801	2232876	.	+	.	ID=rna87;Dbxref=GeneID:7148597;gbkey=tRNA;product=tRNA-Asn
NC_011748.1	RefSeq	exon	2232801	2232876	.	+	.	ID=id164;Parent=rna87;Dbxref=GeneID:7148597;gbkey=tRNA;product=tRNA-Asn
NC_011748.1	RefSeq	gene	2233038	2234300	.	+	.	ID=gene2246;Name=int;Dbxref=GeneID:7145331;gbkey=Gene;gene=int;locus_tag=EC55989_2201
NC_011748.1	RefSeq	CDS	2233038	2234300	.	+	0	ID=cds2102;Name=YP_002403247.1;Parent=gene2246;Note=Evidence 2b : Function of strongly homologous gene%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002403247.1,GeneID:7145331;gbkey=CDS;product=integrase;protein_id=YP_002403247.1;transl_table=11
NC_011748.1	RefSeq	gene	2234494	2235798	.	-	.	ID=gene2247;Name=irp;Dbxref=GeneID:7146604;gbkey=Gene;gene=irp;locus_tag=EC55989_2202
NC_011748.1	RefSeq	CDS	2234494	2235798	.	-	0	ID=cds2103;Name=YP_002403248.1;Parent=gene2247;Note=catalyzes the conversion of chorismate to salicylate in the biosynthesis of the siderophore yersiniabactin;Dbxref=Genbank:YP_002403248.1,GeneID:7146604;gbkey=CDS;product=salicylate synthase Irp9;protein_id=YP_002403248.1;transl_table=11
NC_011748.1	RefSeq	gene	2235826	2237229	.	-	.	ID=gene2248;Name=irp;Dbxref=GeneID:7146611;gbkey=Gene;gene=irp;locus_tag=EC55989_2203
NC_011748.1	RefSeq	CDS	2235826	2237229	.	-	0	ID=cds2104;Name=YP_002403249.1;Parent=gene2248;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002403249.1,GeneID:7146611;gbkey=CDS;product=yersiniabactin-iron transporter permease YbtX;protein_id=YP_002403249.1;transl_table=11
NC_011748.1	RefSeq	gene	2237099	2238928	.	-	.	ID=gene2249;Name=irp;Dbxref=GeneID:7146612;gbkey=Gene;gene=irp;locus_tag=EC55989_2204
NC_011748.1	RefSeq	CDS	2237099	2238928	.	-	0	ID=cds2105;Name=YP_002403250.1;Parent=gene2249;Note=Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism%3B PubMedId : 10231486%2C 11320115%3B Product type t : transporter;Dbxref=Genbank:YP_002403250.1,GeneID:7146612;gbkey=CDS;product=permease and ATP-binding protein of yersiniabactin-iron ABC transporter YbtQ;protein_id=YP_002403250.1;transl_table=11
NC_011748.1	RefSeq	gene	2238888	2240690	.	-	.	ID=gene2250;Name=irp;Dbxref=GeneID:7146613;gbkey=Gene;gene=irp;locus_tag=EC55989_2205
NC_011748.1	RefSeq	CDS	2238888	2240690	.	-	0	ID=cds2106;Name=YP_002403251.1;Parent=gene2250;Note=Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism%3B PubMedId : 10231486%2C 11320115%3B Product type t : transporter;Dbxref=Genbank:YP_002403251.1,GeneID:7146613;gbkey=CDS;product=permease and ATP-binding protein of yersiniabactin-iron ABC transporter YbtP;protein_id=YP_002403251.1;transl_table=11
NC_011748.1	RefSeq	gene	2240857	2241816	.	+	.	ID=gene2251;Name=ybtA;Dbxref=GeneID:7146614;gbkey=Gene;gene=ybtA;locus_tag=EC55989_2206
NC_011748.1	RefSeq	CDS	2240857	2241816	.	+	0	ID=cds2107;Name=YP_002403252.1;Parent=gene2251;Note=Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism%3B PubMedId : 8930916%3B Product type r : regulator;Dbxref=Genbank:YP_002403252.1,GeneID:7146614;gbkey=CDS;product=AraC family transcriptional regulator;protein_id=YP_002403252.1;transl_table=11
NC_011748.1	RefSeq	gene	2241989	2248114	.	+	.	ID=gene2252;Name=irp;Dbxref=GeneID:7148239;gbkey=Gene;gene=irp;locus_tag=EC55989_2207
NC_011748.1	RefSeq	CDS	2241989	2248114	.	+	0	ID=cds2108;Name=YP_002403253.1;Parent=gene2252;Note=Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism%3B PubMedId : 15719346%2C 15582399%2C 8366034%2C 11927258%2C 9709002%3B Product type e : enzyme;Dbxref=Genbank:YP_002403253.1,GeneID:7148239;gbkey=CDS;product=High-molecular-weight nonribosomal peptide%2Fpolyketide synthetase 2 %28HMWP2%29;protein_id=YP_002403253.1;transl_table=11
NC_011748.1	RefSeq	gene	2248202	2257693	.	+	.	ID=gene2253;Name=irp;Dbxref=GeneID:7146615;gbkey=Gene;gene=irp;locus_tag=EC55989_2208
NC_011748.1	RefSeq	CDS	2248202	2257693	.	+	0	ID=cds2109;Name=YP_002403254.1;Parent=gene2253;Note=Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism%3B PubMedId : 15719346%2C 15582399%2C 11927258%3B Product type e : enzyme;Dbxref=Genbank:YP_002403254.1,GeneID:7146615;gbkey=CDS;product=High-molecular-weight nonribosomal peptide%2Fpolyketide synthetase 1 %28HMWP1%29;protein_id=YP_002403254.1;transl_table=11
NC_011748.1	RefSeq	gene	2257630	2258790	.	+	.	ID=gene2254;Name=irp;Dbxref=GeneID:7146616;gbkey=Gene;gene=irp;locus_tag=EC55989_2209
NC_011748.1	RefSeq	CDS	2257630	2258790	.	+	0	ID=cds2110;Name=YP_002403255.1;Parent=gene2254;Note=Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism%3B PubMedId : 11927258%3B Product type e : enzyme;Dbxref=Genbank:YP_002403255.1,GeneID:7146616;gbkey=CDS;product=Thiazolinyl-S-HMWP1 reductase YbtU;protein_id=YP_002403255.1;transl_table=11
NC_011748.1	RefSeq	gene	2258787	2259590	.	+	.	ID=gene2255;Name=irp;Dbxref=GeneID:7146617;gbkey=Gene;gene=irp;locus_tag=EC55989_2210
NC_011748.1	RefSeq	CDS	2258787	2259590	.	+	0	ID=cds2111;Name=YP_002403256.1;Parent=gene2255;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002403256.1,GeneID:7146617;gbkey=CDS;product=thioesterase YbtT;protein_id=YP_002403256.1;transl_table=11
NC_011748.1	RefSeq	gene	2259594	2261171	.	+	.	ID=gene2256;Name=irp;Dbxref=GeneID:7146618;gbkey=Gene;gene=irp;locus_tag=EC55989_2211
NC_011748.1	RefSeq	CDS	2259594	2261171	.	+	0	ID=cds2112;Name=YP_002403257.1;Parent=gene2256;Note=Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism%3B PubMedId : 9818149%2C 11927258%2C 9709002%3B Product type e : enzyme;Dbxref=Genbank:YP_002403257.1,GeneID:7146618;gbkey=CDS;product=salicyl-AMP ligase YbtE;protein_id=YP_002403257.1;transl_table=11
NC_011748.1	RefSeq	gene	2261302	2263323	.	+	.	ID=gene2257;Name=fyuA;Dbxref=GeneID:7146619;gbkey=Gene;gene=fyuA;locus_tag=EC55989_2212
NC_011748.1	RefSeq	CDS	2261302	2263323	.	+	0	ID=cds2113;Name=YP_002403258.1;Parent=gene2257;Note=Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism%3B PubMedId : 7896707%2C 7984105%3B Product type rc : receptor;Dbxref=Genbank:YP_002403258.1,GeneID:7146619;gbkey=CDS;product=Yersiniabactin%2Fpesticin outer membrane receptor %28IRPC%29;protein_id=YP_002403258.1;transl_table=11
NC_011748.1	RefSeq	gene	2263995	2264723	.	+	.	ID=gene2258;Name=yeeJ;Dbxref=GeneID:7146236;gbkey=Gene;gene=yeeJ;locus_tag=EC55989_2213;pseudo=true
NC_011748.1	RefSeq	region	2263995	2264723	.	+	.	ID=id165;Note=adhesin %28part 1%29%3BEvidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pf :  factor;Dbxref=GeneID:7146236;gbkey=misc_feature
NC_011748.1	RefSeq	gene	2264650	2264820	.	+	.	ID=gene2259;Name=yeeJ;Dbxref=GeneID:7148598;gbkey=Gene;gene=yeeJ;locus_tag=EC55989_2214;pseudo=true
NC_011748.1	RefSeq	region	2264650	2264820	.	+	.	ID=id166;Note=adhesin %28part 2%29%3BEvidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pf :  factor;Dbxref=GeneID:7148598;gbkey=misc_feature
NC_011748.1	RefSeq	gene	2264856	2266118	.	+	.	ID=gene2260;Name=yeeJ;Dbxref=GeneID:7148599;gbkey=Gene;gene=yeeJ;locus_tag=EC55989_2215;pseudo=true
NC_011748.1	RefSeq	region	2264856	2266118	.	+	.	ID=id167;Note=fragment of adhesin %28part 1%29%3BEvidence 7 : Gene remnant%3B Product type f : factor;Dbxref=GeneID:7148599;gbkey=misc_feature
NC_011748.1	RefSeq	gene	2266167	2266814	.	+	.	ID=gene2261;Name=yeeJ;Dbxref=GeneID:7148600;gbkey=Gene;gene=yeeJ;locus_tag=EC55989_2216;pseudo=true
NC_011748.1	RefSeq	region	2266167	2266814	.	+	.	ID=id168;Note=fragment of adhesin %28part 2%29%3BEvidence 7 : Gene remnant%3B Product type f : factor;Dbxref=GeneID:7148600;gbkey=misc_feature
NC_011748.1	RefSeq	gene	2266942	2268057	.	-	.	ID=gene2262;Name=EC55989_2217;Dbxref=GeneID:7148601;gbkey=Gene;locus_tag=EC55989_2217
NC_011748.1	RefSeq	CDS	2266942	2268057	.	-	0	ID=cds2114;Name=YP_002403259.1;Parent=gene2262;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403259.1,GeneID:7148601;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403259.1;transl_table=11
NC_011748.1	RefSeq	gene	2268309	2269625	.	+	.	ID=gene2263;Name=shiA;Dbxref=GeneID:7144716;gbkey=Gene;gene=shiA;locus_tag=EC55989_2218
NC_011748.1	RefSeq	CDS	2268309	2269625	.	+	0	ID=cds2115;Name=YP_002403260.1;Parent=gene2263;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 5332864%2C 9524262%3B Product type t : transporter;Dbxref=Genbank:YP_002403260.1,GeneID:7144716;gbkey=CDS;product=shikimate transporter;protein_id=YP_002403260.1;transl_table=11
NC_011748.1	RefSeq	gene	2269727	2271181	.	+	.	ID=gene2264;Name=amn;Dbxref=GeneID:7147653;gbkey=Gene;gene=amn;locus_tag=EC55989_2219
NC_011748.1	RefSeq	CDS	2269727	2271181	.	+	0	ID=cds2116;Name=YP_002403261.1;Parent=gene2264;Note=Catalyzes the hydrolysis of AMP to form adenine and ribose 5-phosphate using water as the nucleophile;Dbxref=Genbank:YP_002403261.1,GeneID:7147653;gbkey=CDS;product=AMP nucleosidase;protein_id=YP_002403261.1;transl_table=11
NC_011748.1	RefSeq	gene	2271524	2272240	.	+	.	ID=gene2265;Name=yeeN;Dbxref=GeneID:7145493;gbkey=Gene;gene=yeeN;locus_tag=EC55989_2220
NC_011748.1	RefSeq	CDS	2271524	2272240	.	+	0	ID=cds2117;Name=YP_002403262.1;Parent=gene2265;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403262.1,GeneID:7145493;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403262.1;transl_table=11
NC_011748.1	RefSeq	gene	2272692	2272767	.	-	.	ID=gene2266;Name=EC55989_tRNA76;Dbxref=GeneID:7148602;gbkey=Gene;locus_tag=EC55989_tRNA76
NC_011748.1	RefSeq	tRNA	2272692	2272767	.	-	.	ID=rna88;Dbxref=GeneID:7148602;gbkey=tRNA;product=tRNA-Asn
NC_011748.1	RefSeq	exon	2272692	2272767	.	-	.	ID=id169;Parent=rna88;Dbxref=GeneID:7148602;gbkey=tRNA;product=tRNA-Asn
NC_011748.1	RefSeq	gene	2272868	2274508	.	-	.	ID=gene2267;Name=yeeO;Dbxref=GeneID:7145390;gbkey=Gene;gene=yeeO;locus_tag=EC55989_2221
NC_011748.1	RefSeq	CDS	2272868	2274508	.	-	0	ID=cds2118;Name=YP_002403263.1;Parent=gene2267;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 16042411%3B Product type pt :  transporter;Dbxref=Genbank:YP_002403263.1,GeneID:7145390;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403263.1;transl_table=11
NC_011748.1	RefSeq	gene	2274516	2274591	.	+	.	ID=gene2268;Name=EC55989_tRNA23;Dbxref=GeneID:7148603;gbkey=Gene;locus_tag=EC55989_tRNA23
NC_011748.1	RefSeq	tRNA	2274516	2274591	.	+	.	ID=rna89;Dbxref=GeneID:7148603;gbkey=tRNA;product=tRNA-Asn
NC_011748.1	RefSeq	exon	2274516	2274591	.	+	.	ID=id170;Parent=rna89;Dbxref=GeneID:7148603;gbkey=tRNA;product=tRNA-Asn
NC_011748.1	RefSeq	gene	2274629	2275579	.	-	.	ID=gene2269;Name=cbl;Dbxref=GeneID:7145332;gbkey=Gene;gene=cbl;locus_tag=EC55989_2222
NC_011748.1	RefSeq	CDS	2274629	2275579	.	-	0	ID=cds2119;Name=YP_002403264.1;Parent=gene2269;Note=LysR-type transcriptional regulator similar to CysB%3B contains helix-turn-helix %28HTH%29 motif%3B in Escherichia coli this protein regulates two operons consisting of ABC transporters that are part of the cys regulon%3B regulated by CysB;Dbxref=Genbank:YP_002403264.1,GeneID:7145332;gbkey=CDS;product=transcriptional regulator Cbl;protein_id=YP_002403264.1;transl_table=11
NC_011748.1	RefSeq	gene	2275681	2276598	.	-	.	ID=gene2270;Name=nac;Dbxref=GeneID:7145666;gbkey=Gene;gene=nac;locus_tag=EC55989_2223
NC_011748.1	RefSeq	CDS	2275681	2276598	.	-	0	ID=cds2120;Name=YP_002403265.1;Parent=gene2270;Note=Transcriptional activator for the hut%2C put and ure operons and repressor for the gdh and gltB operons in response to nitrogen limitation;Dbxref=Genbank:YP_002403265.1,GeneID:7145666;gbkey=CDS;product=nitrogen assimilation transcriptional regulator;protein_id=YP_002403265.1;transl_table=11
NC_011748.1	RefSeq	gene	2276925	2277000	.	+	.	ID=gene2271;Name=EC55989_tRNA24;Dbxref=GeneID:7146941;gbkey=Gene;locus_tag=EC55989_tRNA24
NC_011748.1	RefSeq	tRNA	2276925	2277000	.	+	.	ID=rna90;Dbxref=GeneID:7146941;gbkey=tRNA;product=tRNA-Asn
NC_011748.1	RefSeq	exon	2276925	2277000	.	+	.	ID=id171;Parent=rna90;Dbxref=GeneID:7146941;gbkey=tRNA;product=tRNA-Asn
NC_011748.1	RefSeq	gene	2277056	2277988	.	-	.	ID=gene2272;Name=erfK;Dbxref=GeneID:7145333;gbkey=Gene;gene=erfK;locus_tag=EC55989_2224
NC_011748.1	RefSeq	CDS	2277056	2277988	.	-	0	ID=cds2121;Name=YP_002403266.1;Parent=gene2272;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 9298646;Dbxref=Genbank:YP_002403266.1,GeneID:7145333;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403266.1;transl_table=11
NC_011748.1	RefSeq	gene	2278053	2279132	.	-	.	ID=gene2273;Name=cobT;Dbxref=GeneID:7146022;gbkey=Gene;gene=cobT;locus_tag=EC55989_2225
NC_011748.1	RefSeq	CDS	2278053	2279132	.	-	0	ID=cds2122;Name=YP_002403267.1;Parent=gene2273;Note=catalyzes the synthesis of alpha-ribazole-5%27-phosphate from nicotinate mononucleotide and 5%2C6-dimethylbenzimidazole;Dbxref=Genbank:YP_002403267.1,GeneID:7146022;gbkey=CDS;product=nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase;protein_id=YP_002403267.1;transl_table=11
NC_011748.1	RefSeq	gene	2279144	2279887	.	-	.	ID=gene2274;Name=cobS;Dbxref=GeneID:7145737;gbkey=Gene;gene=cobS;locus_tag=EC55989_2226
NC_011748.1	RefSeq	CDS	2279144	2279887	.	-	0	ID=cds2123;Name=YP_002403268.1;Parent=gene2274;Note=catalyzes the formation of adenosylcobalamin from Ado-cobinamide-GDP and alpha-ribazole;Dbxref=Genbank:YP_002403268.1,GeneID:7145737;gbkey=CDS;product=cobalamin synthase;protein_id=YP_002403268.1;transl_table=11
NC_011748.1	RefSeq	gene	2279884	2280429	.	-	.	ID=gene2275;Name=cobU;Dbxref=GeneID:7145736;gbkey=Gene;gene=cobU;locus_tag=EC55989_2227
NC_011748.1	RefSeq	CDS	2279884	2280429	.	-	0	ID=cds2124;Name=YP_002403269.1;Parent=gene2275;Note=catalyzes ATP-dependent phosphorylation of adenosylcobinamide to form adenosylcobinamide phosphate and the addition of guanosine monophosphate to adenosylcobinamide phosphate to form adenosylcobinamide-GDP;Dbxref=Genbank:YP_002403269.1,GeneID:7145736;gbkey=CDS;product=adenosylcobinamide kinase;protein_id=YP_002403269.1;transl_table=11
NC_011748.1	RefSeq	gene	2280563	2280703	.	-	.	ID=gene2276;Name=EC55989_2228;Dbxref=GeneID:7145738;gbkey=Gene;locus_tag=EC55989_2228;pseudo=true
NC_011748.1	RefSeq	region	2280563	2280703	.	-	.	ID=id172;Note=fragment of   Cobalamin biosynthesis protein CbiG %28partial%29%3BEvidence 7 : Gene remnant;Dbxref=GeneID:7145738;gbkey=misc_feature
NC_011748.1	RefSeq	gene	2280894	2281058	.	-	.	ID=gene2277;Name=EC55989_2229;Dbxref=GeneID:7144717;gbkey=Gene;locus_tag=EC55989_2229
NC_011748.1	RefSeq	CDS	2280894	2281058	.	-	0	ID=cds2125;Name=YP_002403270.1;Parent=gene2277;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403270.1,GeneID:7144717;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403270.1;transl_table=11
NC_011748.1	RefSeq	gene	2282184	2282300	.	+	.	ID=gene2278;Name=EC55989_2231;Dbxref=GeneID:7144718;gbkey=Gene;locus_tag=EC55989_2231
NC_011748.1	RefSeq	CDS	2282184	2282300	.	+	0	ID=cds2126;Name=YP_002403271.1;Parent=gene2278;Note=Evidence 6 : Doubtful CDS;Dbxref=Genbank:YP_002403271.1,GeneID:7144718;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403271.1;transl_table=11
NC_011748.1	RefSeq	gene	2282496	2283710	.	+	.	ID=gene2279;Name=EC55989_2232;Dbxref=GeneID:7144719;gbkey=Gene;locus_tag=EC55989_2232
NC_011748.1	RefSeq	CDS	2282496	2283710	.	+	0	ID=cds2127;Name=YP_002403272.1;Parent=gene2279;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002403272.1,GeneID:7144719;gbkey=CDS;product=carbohydrate kinase;protein_id=YP_002403272.1;transl_table=11
NC_011748.1	RefSeq	gene	2283724	2284482	.	+	.	ID=gene2280;Name=EC55989_2233;Dbxref=GeneID:7144720;gbkey=Gene;locus_tag=EC55989_2233
NC_011748.1	RefSeq	CDS	2283724	2284482	.	+	0	ID=cds2128;Name=YP_002403273.1;Parent=gene2280;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403273.1,GeneID:7144720;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403273.1;transl_table=11
NC_011748.1	RefSeq	gene	2284539	2285147	.	+	.	ID=gene2281;Name=EC55989_2234;Dbxref=GeneID:7144721;gbkey=Gene;locus_tag=EC55989_2234;pseudo=true
NC_011748.1	RefSeq	region	2284539	2285147	.	+	.	ID=id173;Note=fragment of  membrane protein %28part 1%29%3BEvidence 7 : Gene remnant;Dbxref=GeneID:7144721;gbkey=misc_feature
NC_011748.1	RefSeq	gene	2285241	2285504	.	+	.	ID=gene2282;Name=EC55989_2235;Dbxref=GeneID:7144722;gbkey=Gene;locus_tag=EC55989_2235;pseudo=true
NC_011748.1	RefSeq	region	2285241	2285504	.	+	.	ID=id174;Note=fragment of  membrane protein %28part 2%29%3BEvidence 7 : Gene remnant;Dbxref=GeneID:7144722;gbkey=misc_feature
NC_011748.1	RefSeq	gene	2285507	2286541	.	+	.	ID=gene2283;Name=EC55989_2236;Dbxref=GeneID:7144723;gbkey=Gene;locus_tag=EC55989_2236
NC_011748.1	RefSeq	CDS	2285507	2286541	.	+	0	ID=cds2129;Name=YP_002403274.1;Parent=gene2283;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002403274.1,GeneID:7144723;gbkey=CDS;product=phosphotriesterase-related protein;protein_id=YP_002403274.1;transl_table=11
NC_011748.1	RefSeq	gene	2286581	2286694	.	-	.	ID=gene2284;Name=ggt;Dbxref=GeneID:7144724;gbkey=Gene;gene=ggt;locus_tag=EC55989_2237;pseudo=true
NC_011748.1	RefSeq	region	2286581	2286694	.	-	.	ID=id175;Note=fragment of gamma-glutamyltranspeptidase %28partial%29%3BEvidence 7 : Gene remnant%3B Product type e : enzyme;Dbxref=GeneID:7144724;gbkey=misc_feature
NC_011748.1	RefSeq	gene	2286685	2286909	.	-	.	ID=gene2285;Name=EC55989_2238;Dbxref=GeneID:7146281;gbkey=Gene;locus_tag=EC55989_2238
NC_011748.1	RefSeq	CDS	2286685	2286909	.	-	0	ID=cds2130;Name=YP_002403275.1;Parent=gene2285;Dbxref=Genbank:YP_002403275.1,GeneID:7146281;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403275.1;transl_table=11
NC_011748.1	RefSeq	gene	2286953	2287114	.	-	.	ID=gene2286;Name=EC55989_2239;Dbxref=GeneID:7144725;gbkey=Gene;locus_tag=EC55989_2239;pseudo=true
NC_011748.1	RefSeq	region	2286953	2287114	.	-	.	ID=id176;Note=fragment of   transposase %28fragment%29 %28partial%29%3BEvidence 7 : Gene remnant;Dbxref=GeneID:7144725;gbkey=misc_feature
NC_011748.1	RefSeq	gene	2287193	2288572	.	-	.	ID=gene2287;Name=EC55989_2240;Dbxref=GeneID:7144726;gbkey=Gene;locus_tag=EC55989_2240
NC_011748.1	RefSeq	CDS	2287193	2288572	.	-	0	ID=cds2131;Name=YP_002403276.1;Parent=gene2287;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002403276.1,GeneID:7144726;gbkey=CDS;product=transposase%2C ISL3 family;protein_id=YP_002403276.1;transl_table=11
NC_011748.1	RefSeq	gene	2288856	2289353	.	-	.	ID=gene2288;Name=EC55989_2241;Dbxref=GeneID:7144727;gbkey=Gene;locus_tag=EC55989_2241
NC_011748.1	RefSeq	CDS	2288856	2289353	.	-	0	ID=cds2132;Name=YP_002403277.1;Parent=gene2288;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403277.1,GeneID:7144727;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403277.1;transl_table=11
NC_011748.1	RefSeq	gene	2289254	2289661	.	-	.	ID=gene2289;Name=EC55989_2242;Dbxref=GeneID:7144728;gbkey=Gene;locus_tag=EC55989_2242
NC_011748.1	RefSeq	CDS	2289254	2289661	.	-	0	ID=cds2133;Name=YP_002403278.1;Parent=gene2289;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403278.1,GeneID:7144728;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403278.1;transl_table=11
NC_011748.1	RefSeq	gene	2289915	2290520	.	-	.	ID=gene2290;Name=EC55989_2243;Dbxref=GeneID:7144729;gbkey=Gene;locus_tag=EC55989_2243
NC_011748.1	RefSeq	CDS	2289915	2290520	.	-	0	ID=cds2134;Name=YP_002403279.1;Parent=gene2290;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403279.1,GeneID:7144729;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403279.1;transl_table=11
NC_011748.1	RefSeq	STS	2291181	2291197	.	+	.	ID=id177;Dbxref=UniSTS:98954;gbkey=STS
NC_011748.1	RefSeq	gene	2291810	2292217	.	+	.	ID=gene2291;Name=EC55989_2244;Dbxref=GeneID:7144730;gbkey=Gene;locus_tag=EC55989_2244
NC_011748.1	RefSeq	CDS	2291810	2292217	.	+	0	ID=cds2135;Name=YP_002403280.1;Parent=gene2291;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002403280.1,GeneID:7144730;gbkey=CDS;product=InterPro motifs Prophage CP4-57 regulatory protein %28AlpA%29;protein_id=YP_002403280.1;transl_table=11
NC_011748.1	RefSeq	gene	2292296	2292913	.	+	.	ID=gene2292;Name=EC55989_2245;Dbxref=GeneID:7144731;gbkey=Gene;locus_tag=EC55989_2245
NC_011748.1	RefSeq	CDS	2292296	2292913	.	+	0	ID=cds2136;Name=YP_002403281.1;Parent=gene2292;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403281.1,GeneID:7144731;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403281.1;transl_table=11
NC_011748.1	RefSeq	gene	2293341	2293601	.	+	.	ID=gene2293;Name=EC55989_2246;Dbxref=GeneID:7144732;gbkey=Gene;locus_tag=EC55989_2246
NC_011748.1	RefSeq	CDS	2293341	2293601	.	+	0	ID=cds2137;Name=YP_002403282.1;Parent=gene2293;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403282.1,GeneID:7144732;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403282.1;transl_table=11
NC_011748.1	RefSeq	region	2293651	2293740	.	-	.	ID=id178;Note=similar to hypothetical protein%3B Evidence 6 : Doubtful CDS;gbkey=misc_feature
NC_011748.1	RefSeq	gene	2293872	2295407	.	-	.	ID=gene2294;Name=EC55989_2248;Dbxref=GeneID:7144734;gbkey=Gene;locus_tag=EC55989_2248
NC_011748.1	RefSeq	CDS	2293872	2295407	.	-	0	ID=cds2138;Name=YP_002403284.1;Parent=gene2294;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002403284.1,GeneID:7144734;gbkey=CDS;product=transposase ORF 1%2C IS66 family;protein_id=YP_002403284.1;transl_table=11
NC_011748.1	RefSeq	gene	2295457	2295804	.	-	.	ID=gene2295;Name=EC55989_2249;Dbxref=GeneID:7144735;gbkey=Gene;locus_tag=EC55989_2249
NC_011748.1	RefSeq	CDS	2295457	2295804	.	-	0	ID=cds2139;Name=YP_002403285.1;Parent=gene2295;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002403285.1,GeneID:7144735;gbkey=CDS;product=transposase ORF 2%2C IS66 family;protein_id=YP_002403285.1;transl_table=11
NC_011748.1	RefSeq	gene	2297740	2298903	.	+	.	ID=gene2296;Name=EC55989_2250;Dbxref=GeneID:7144736;gbkey=Gene;locus_tag=EC55989_2250
NC_011748.1	RefSeq	CDS	2297740	2298903	.	+	0	ID=cds2140;Name=YP_002403286.1;Parent=gene2296;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403286.1,GeneID:7144736;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403286.1;transl_table=11
NC_011748.1	RefSeq	gene	2298948	2299628	.	+	.	ID=gene2297;Name=EC55989_2251;Dbxref=GeneID:7144737;gbkey=Gene;locus_tag=EC55989_2251;pseudo=true
NC_011748.1	RefSeq	region	2298948	2299628	.	+	.	ID=id179;Note=fragment of  GTP-binding domain %28part 1%29%3BEvidence 7 : Gene remnant;Dbxref=GeneID:7144737;gbkey=misc_feature
NC_011748.1	RefSeq	gene	2299472	2299858	.	+	.	ID=gene2298;Name=EC55989_2252;Dbxref=GeneID:7144738;gbkey=Gene;locus_tag=EC55989_2252;pseudo=true
NC_011748.1	RefSeq	region	2299472	2299858	.	+	.	ID=id180;Note=fragment of  GTP-binding domain %28part 2%29%3BEvidence 7 : Gene remnant;Dbxref=GeneID:7144738;gbkey=misc_feature
NC_011748.1	RefSeq	gene	2300076	2302472	.	+	.	ID=gene2299;Name=EC55989_2253;Dbxref=GeneID:7144739;gbkey=Gene;locus_tag=EC55989_2253
NC_011748.1	RefSeq	CDS	2300076	2302472	.	+	0	ID=cds2141;Name=YP_002403287.1;Parent=gene2299;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403287.1,GeneID:7144739;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403287.1;transl_table=11
NC_011748.1	RefSeq	gene	2302469	2303374	.	+	.	ID=gene2300;Name=EC55989_2254;Dbxref=GeneID:7144740;gbkey=Gene;locus_tag=EC55989_2254
NC_011748.1	RefSeq	CDS	2302469	2303374	.	+	0	ID=cds2142;Name=YP_002403288.1;Parent=gene2300;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403288.1,GeneID:7144740;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403288.1;transl_table=11
NC_011748.1	RefSeq	gene	2303371	2304441	.	+	.	ID=gene2301;Name=EC55989_2255;Dbxref=GeneID:7144741;gbkey=Gene;locus_tag=EC55989_2255
NC_011748.1	RefSeq	CDS	2303371	2304441	.	+	0	ID=cds2143;Name=YP_002403289.1;Parent=gene2301;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403289.1,GeneID:7144741;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403289.1;transl_table=11
NC_011748.1	RefSeq	gene	2304469	2305260	.	+	.	ID=gene2302;Name=EC55989_2256;Dbxref=GeneID:7144742;gbkey=Gene;locus_tag=EC55989_2256
NC_011748.1	RefSeq	CDS	2304469	2305260	.	+	0	ID=cds2144;Name=YP_002403290.1;Parent=gene2302;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403290.1,GeneID:7144742;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403290.1;transl_table=11
NC_011748.1	RefSeq	gene	2305276	2305686	.	+	.	ID=gene2303;Name=EC55989_2257;Dbxref=GeneID:7144743;gbkey=Gene;locus_tag=EC55989_2257
NC_011748.1	RefSeq	CDS	2305276	2305686	.	+	0	ID=cds2145;Name=YP_002403291.1;Parent=gene2303;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403291.1,GeneID:7144743;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403291.1;transl_table=11
NC_011748.1	RefSeq	gene	2305907	2306728	.	+	.	ID=gene2304;Name=EC55989_2258;Dbxref=GeneID:7144744;gbkey=Gene;locus_tag=EC55989_2258
NC_011748.1	RefSeq	CDS	2305907	2306728	.	+	0	ID=cds2146;Name=YP_002403292.1;Parent=gene2304;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403292.1,GeneID:7144744;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403292.1;transl_table=11
NC_011748.1	RefSeq	gene	2306810	2307289	.	+	.	ID=gene2305;Name=EC55989_2259;Dbxref=GeneID:7144745;gbkey=Gene;locus_tag=EC55989_2259
NC_011748.1	RefSeq	CDS	2306810	2307289	.	+	0	ID=cds2147;Name=YP_002403293.1;Parent=gene2305;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 7519596%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002403293.1,GeneID:7144745;gbkey=CDS;product=antirestriction protein of plasmid origin;protein_id=YP_002403293.1;transl_table=11
NC_011748.1	RefSeq	gene	2307335	2307781	.	+	.	ID=gene2306;Name=yeeS;Dbxref=GeneID:7144746;gbkey=Gene;gene=yeeS;locus_tag=EC55989_2260
NC_011748.1	RefSeq	CDS	2307335	2307781	.	+	0	ID=cds2148;Name=YP_002403294.1;Parent=gene2306;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 11053371%3B Product type pf :  factor;Dbxref=Genbank:YP_002403294.1,GeneID:7144746;gbkey=CDS;product=DNA repair protein%3B CP4-44 prophage;protein_id=YP_002403294.1;transl_table=11
NC_011748.1	RefSeq	gene	2307844	2308065	.	+	.	ID=gene2307;Name=yeeT;Dbxref=GeneID:7148604;gbkey=Gene;gene=yeeT;locus_tag=EC55989_2261
NC_011748.1	RefSeq	CDS	2307844	2308065	.	+	0	ID=cds2149;Name=YP_002403295.1;Parent=gene2307;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002403295.1,GeneID:7148604;gbkey=CDS;product=CP4-44 prophage;protein_id=YP_002403295.1;transl_table=11
NC_011748.1	RefSeq	gene	2308139	2308507	.	+	.	ID=gene2308;Name=yeeU;Dbxref=GeneID:7148608;gbkey=Gene;gene=yeeU;locus_tag=EC55989_2262
NC_011748.1	RefSeq	CDS	2308139	2308507	.	+	0	ID=cds2150;Name=YP_002403296.1;Parent=gene2308;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 14594833%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002403296.1,GeneID:7148608;gbkey=CDS;product=antitoxin of the YeeV-YeeU toxin-antitoxin system%3B CP4-44 prophage;protein_id=YP_002403296.1;transl_table=11
NC_011748.1	RefSeq	gene	2308596	2308859	.	+	.	ID=gene2309;Name=yeeV;Dbxref=GeneID:7148612;gbkey=Gene;gene=yeeV;locus_tag=EC55989_2263;pseudo=true
NC_011748.1	RefSeq	region	2308596	2308859	.	+	.	ID=id181;Note=fragment of toxin of the YeeV-YeeU toxin-antitoxin system%3B CP4-44 prophage %28partial%29%3BEvidence 7 : Gene remnant%3B Product type h : extrachromosomal origin;Dbxref=GeneID:7148612;gbkey=misc_feature
NC_011748.1	RefSeq	gene	2308966	2309160	.	+	.	ID=gene2310;Name=yeeW;Dbxref=GeneID:7148616;gbkey=Gene;gene=yeeW;locus_tag=EC55989_2264
NC_011748.1	RefSeq	CDS	2308966	2309160	.	+	0	ID=cds2151;Name=YP_002403297.1;Parent=gene2310;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002403297.1,GeneID:7148616;gbkey=CDS;product=CP4-44 prophage;protein_id=YP_002403297.1;transl_table=11
NC_011748.1	RefSeq	gene	2309601	2309957	.	+	.	ID=gene2311;Name=yoeF;Dbxref=GeneID:7148619;gbkey=Gene;gene=yoeF;locus_tag=EC55989_2265
NC_011748.1	RefSeq	CDS	2309601	2309957	.	+	0	ID=cds2152;Name=YP_002403298.1;Parent=gene2311;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403298.1,GeneID:7148619;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403298.1;transl_table=11
NC_011748.1	RefSeq	gene	2310058	2310453	.	-	.	ID=gene2312;Name=yeeX;Dbxref=GeneID:7149350;gbkey=Gene;gene=yeeX;locus_tag=EC55989_2266
NC_011748.1	RefSeq	CDS	2310058	2310453	.	-	0	ID=cds2153;Name=YP_002403299.1;Parent=gene2312;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403299.1,GeneID:7149350;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403299.1;transl_table=11
NC_011748.1	RefSeq	gene	2310559	2311617	.	-	.	ID=gene2313;Name=yeeA;Dbxref=GeneID:7148623;gbkey=Gene;gene=yeeA;locus_tag=EC55989_2267
NC_011748.1	RefSeq	CDS	2310559	2311617	.	-	0	ID=cds2154;Name=YP_002403300.1;Parent=gene2313;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002403300.1,GeneID:7148623;gbkey=CDS;product=inner membrane protein;protein_id=YP_002403300.1;transl_table=11
NC_011748.1	RefSeq	gene	2311815	2312288	.	-	.	ID=gene2314;Name=sbmC;Dbxref=GeneID:7148593;gbkey=Gene;gene=sbmC;locus_tag=EC55989_2268
NC_011748.1	RefSeq	CDS	2311815	2312288	.	-	0	ID=cds2155;Name=YP_002403301.1;Parent=gene2314;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 11850398%2C 9442027%2C 8709849%3B Product type r : regulator;Dbxref=Genbank:YP_002403301.1,GeneID:7148593;gbkey=CDS;product=DNA gyrase inhibitor;protein_id=YP_002403301.1;transl_table=11
NC_011748.1	RefSeq	gene	2312407	2313573	.	-	.	ID=gene2315;Name=dacD;Dbxref=GeneID:7147610;gbkey=Gene;gene=dacD;locus_tag=EC55989_2269
NC_011748.1	RefSeq	CDS	2312407	2313573	.	-	0	ID=cds2156;Name=YP_002403302.1;Parent=gene2315;Note=removes C-terminal D-alanyl residues from sugar-peptide cell wall precursors%3B penicillin-binding protein 6B%3B one of four%2C DD-carboxypeptidase low-molecular weight penicillin-binding proteins that remove terminal D-alanine from pentapeptide side chains;Dbxref=Genbank:YP_002403302.1,GeneID:7147610;gbkey=CDS;product=D-alanyl-D-alanine carboxypeptidase;protein_id=YP_002403302.1;transl_table=11
NC_011748.1	RefSeq	gene	2313782	2315209	.	+	.	ID=gene2316;Name=sbcB;Dbxref=GeneID:7145844;gbkey=Gene;gene=sbcB;locus_tag=EC55989_2270
NC_011748.1	RefSeq	CDS	2313782	2315209	.	+	0	ID=cds2157;Name=YP_002403303.1;Parent=gene2316;Note=Exonucleolytic cleavage in the 3%27- to 5%27-direction to yield nucleoside 5%27-phosphates;Dbxref=Genbank:YP_002403303.1,GeneID:7145844;gbkey=CDS;product=exonuclease I;protein_id=YP_002403303.1;transl_table=11
NC_011748.1	RefSeq	gene	2315252	2315479	.	-	.	ID=gene2317;Name=yeeD;Dbxref=GeneID:7147606;gbkey=Gene;gene=yeeD;locus_tag=EC55989_2271
NC_011748.1	RefSeq	CDS	2315252	2315479	.	-	0	ID=cds2158;Name=YP_002403304.1;Parent=gene2317;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403304.1,GeneID:7147606;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403304.1;transl_table=11
NC_011748.1	RefSeq	gene	2315493	2316551	.	-	.	ID=gene2318;Name=yeeE;Dbxref=GeneID:7148594;gbkey=Gene;gene=yeeE;locus_tag=EC55989_2272
NC_011748.1	RefSeq	CDS	2315493	2316551	.	-	0	ID=cds2159;Name=YP_002403305.1;Parent=gene2318;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002403305.1,GeneID:7148594;gbkey=CDS;product=inner membrane protein;protein_id=YP_002403305.1;transl_table=11
NC_011748.1	RefSeq	gene	2316730	2318088	.	-	.	ID=gene2319;Name=yeeF;Dbxref=GeneID:7148595;gbkey=Gene;gene=yeeF;locus_tag=EC55989_2273
NC_011748.1	RefSeq	CDS	2316730	2318088	.	-	0	ID=cds2160;Name=YP_002403306.1;Parent=gene2319;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002403306.1,GeneID:7148595;gbkey=CDS;product=amino-acid%2Famine transporter;protein_id=YP_002403306.1;transl_table=11
NC_011748.1	RefSeq	gene	2318355	2319284	.	-	.	ID=gene2320;Name=yeeY;Dbxref=GeneID:7148596;gbkey=Gene;gene=yeeY;locus_tag=EC55989_2274
NC_011748.1	RefSeq	CDS	2318355	2319284	.	-	0	ID=cds2161;Name=YP_002403307.1;Parent=gene2320;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pr :  regulator;Dbxref=Genbank:YP_002403307.1,GeneID:7148596;gbkey=CDS;product=DNA-binding transcriptional regulator;protein_id=YP_002403307.1;transl_table=11
NC_011748.1	RefSeq	gene	2319330	2320154	.	-	.	ID=gene2321;Name=yeeZ;Dbxref=GeneID:7148624;gbkey=Gene;gene=yeeZ;locus_tag=EC55989_2275
NC_011748.1	RefSeq	CDS	2319330	2320154	.	-	0	ID=cds2162;Name=YP_002403308.1;Parent=gene2321;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002403308.1,GeneID:7148624;gbkey=CDS;product=epimerase%2C with NAD%28P%29-binding Rossmann-fold domain;protein_id=YP_002403308.1;transl_table=11
NC_011748.1	RefSeq	gene	2320237	2320491	.	-	.	ID=gene2322;Name=yoeB;Dbxref=GeneID:7148625;gbkey=Gene;gene=yoeB;locus_tag=EC55989_2276
NC_011748.1	RefSeq	CDS	2320237	2320491	.	-	0	ID=cds2163;Name=YP_002403309.1;Parent=gene2322;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B Product type f : factor;Dbxref=Genbank:YP_002403309.1,GeneID:7148625;gbkey=CDS;product=toxin of the YoeB-YefM toxin-antitoxin system;protein_id=YP_002403309.1;transl_table=11
NC_011748.1	RefSeq	gene	2320488	2320739	.	-	.	ID=gene2323;Name=yefM;Dbxref=GeneID:7149349;gbkey=Gene;gene=yefM;locus_tag=EC55989_2277
NC_011748.1	RefSeq	CDS	2320488	2320739	.	-	0	ID=cds2164;Name=YP_002403310.1;Parent=gene2323;Note=Antitoxin that counteracts the effect of the YoeB toxin;Dbxref=Genbank:YP_002403310.1,GeneID:7149349;gbkey=CDS;product=antitoxin YefM;protein_id=YP_002403310.1;transl_table=11
NC_011748.1	RefSeq	gene	2321023	2321073	.	+	.	ID=gene2324;Name=hisL;Dbxref=GeneID:7148626;gbkey=Gene;gene=hisL;locus_tag=EC55989_5070
NC_011748.1	RefSeq	CDS	2321023	2321073	.	+	0	ID=cds2165;Name=YP_002403311.1;Parent=gene2324;Note=Evidence 1c : Function experimentally demonstrated in the studied genus%3B Product type l : leader peptide;Dbxref=Genbank:YP_002403311.1,GeneID:7148626;gbkey=CDS;product=his operon leader peptide;protein_id=YP_002403311.1;transl_table=11
NC_011748.1	RefSeq	gene	2321049	2321172	.	+	.	ID=gene2325;Name=EC55989_misc_RNA_47;Dbxref=GeneID:7146439;gbkey=Gene;locus_tag=EC55989_misc_RNA_47
NC_011748.1	RefSeq	transcript	2321049	2321172	.	+	.	ID=rna91;Parent=gene2325;Dbxref=GeneID:7146439;gbkey=misc_RNA;product=His_leader
NC_011748.1	RefSeq	exon	2321049	2321172	.	+	.	ID=id182;Parent=rna91;Dbxref=GeneID:7146439;gbkey=misc_RNA;product=His_leader
NC_011748.1	RefSeq	gene	2321219	2322118	.	+	.	ID=gene2326;Name=hisG;Dbxref=GeneID:7145305;gbkey=Gene;gene=hisG;locus_tag=EC55989_2278
NC_011748.1	RefSeq	CDS	2321219	2322118	.	+	0	ID=cds2166;Name=YP_002403312.1;Parent=gene2326;Note=long form of enzyme%3B catalyzes the formation of N%27-5%27-phosphoribosyl-ATP from phosphoribosyl pyrophosphate%3B crucial role in histidine biosynthesis%3B forms active dimers and inactive hexamers which is dependent on concentration of substrates and inhibitors;Dbxref=Genbank:YP_002403312.1,GeneID:7145305;gbkey=CDS;product=ATP phosphoribosyltransferase;protein_id=YP_002403312.1;transl_table=11
NC_011748.1	RefSeq	gene	2322124	2323428	.	+	.	ID=gene2327;Name=hisD;Dbxref=GeneID:7146435;gbkey=Gene;gene=hisD;locus_tag=EC55989_2279
NC_011748.1	RefSeq	CDS	2322124	2323428	.	+	0	ID=cds2167;Name=YP_002403313.1;Parent=gene2327;Note=catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis%3B functions as a dimer;Dbxref=Genbank:YP_002403313.1,GeneID:7146435;gbkey=CDS;product=histidinol dehydrogenase;protein_id=YP_002403313.1;transl_table=11
NC_011748.1	RefSeq	gene	2323425	2324495	.	+	.	ID=gene2328;Name=hisC;Dbxref=GeneID:7146433;gbkey=Gene;gene=hisC;locus_tag=EC55989_2280
NC_011748.1	RefSeq	CDS	2323425	2324495	.	+	0	ID=cds2168;Name=YP_002403314.1;Parent=gene2328;Note=catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis;Dbxref=Genbank:YP_002403314.1,GeneID:7146433;gbkey=CDS;product=histidinol-phosphate aminotransferase;protein_id=YP_002403314.1;transl_table=11
NC_011748.1	RefSeq	gene	2324495	2325562	.	+	.	ID=gene2329;Name=hisB;Dbxref=GeneID:7146432;gbkey=Gene;gene=hisB;locus_tag=EC55989_2281
NC_011748.1	RefSeq	CDS	2324495	2325562	.	+	0	ID=cds2169;Name=YP_002403315.1;Parent=gene2329;Note=catalyzes the formation of 3-%28imidazol-4-yl%29-2-oxopropyl phosphate from D-ethythro-1-%28imidazol-4-yl%29glycerol 3-phosphate and histidinol from histidinol phosphate;Dbxref=Genbank:YP_002403315.1,GeneID:7146432;gbkey=CDS;product=imidazole glycerol-phosphate dehydratase%2Fhistidinol phosphatase;protein_id=YP_002403315.1;transl_table=11
NC_011748.1	RefSeq	gene	2325562	2326152	.	+	.	ID=gene2330;Name=hisH;Dbxref=GeneID:7146431;gbkey=Gene;gene=hisH;locus_tag=EC55989_2282
NC_011748.1	RefSeq	CDS	2325562	2326152	.	+	0	ID=cds2170;Name=YP_002403316.1;Parent=gene2330;Note=with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate%2C 5-aminoimidazol-4-carboxamide ribonucleotide%2C and glutamate in histidine biosynthesis%3B the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide;Dbxref=Genbank:YP_002403316.1,GeneID:7146431;gbkey=CDS;product=imidazole glycerol phosphate synthase subunit HisH;protein_id=YP_002403316.1;transl_table=11
NC_011748.1	RefSeq	gene	2326152	2326889	.	+	.	ID=gene2331;Name=hisA;Dbxref=GeneID:7146436;gbkey=Gene;gene=hisA;locus_tag=EC55989_2283
NC_011748.1	RefSeq	CDS	2326152	2326889	.	+	0	ID=cds2171;Name=YP_002403317.1;Parent=gene2331;Note=catalyzes the formation of 5-%285-phospho-1-deoxyribulos-1-ylamino%29methylideneamino-l-%285-phosphoribosyl%29imidazole-4-carboxamide from 1-%285-phosphoribosyl%29-5-%5B%285-phosphoribosylamino%29methylideneamino%5D imidazole-4-carboxamide;Dbxref=Genbank:YP_002403317.1,GeneID:7146436;gbkey=CDS;product=1-%285-phosphoribosyl%29-5-%5B%285-phosphoribosylamino%29methylideneamino%5D imidazole-4-carboxamide isomerase;protein_id=YP_002403317.1;transl_table=11
NC_011748.1	RefSeq	gene	2326871	2327647	.	+	.	ID=gene2332;Name=hisF;Dbxref=GeneID:7146430;gbkey=Gene;gene=hisF;locus_tag=EC55989_2284
NC_011748.1	RefSeq	CDS	2326871	2327647	.	+	0	ID=cds2172;Name=YP_002403318.1;Parent=gene2332;Note=catalyzes the conversion of 5-%5B%285-phospho-1-deoxyribulos-1-ylamino%29methylideneamino%5D-1-%285-phosphoribosyl%29imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate%2C 5-aminoimidazol-4-carboxamideribonucleotide and glutamate%3B the HisF subunit acts as a cyclase;Dbxref=Genbank:YP_002403318.1,GeneID:7146430;gbkey=CDS;product=imidazole glycerol phosphate synthase subunit HisF;protein_id=YP_002403318.1;transl_table=11
NC_011748.1	RefSeq	gene	2327641	2328252	.	+	.	ID=gene2333;Name=hisI;Dbxref=GeneID:7146434;gbkey=Gene;gene=hisI;locus_tag=EC55989_2285
NC_011748.1	RefSeq	CDS	2327641	2328252	.	+	0	ID=cds2173;Name=YP_002403319.1;Parent=gene2333;Note=catalyzes the formation of 1-%285-phosphoribosyl%29-AMP from 1-%285-phosphoribosyl%29-ATP and the subsequent formation of 1-%285-phosphoribosyl%29-5-%28%285-phosphoribosylamino%29methylideneamino%29imidazole-4-carboxamide from 1-%285-phosphoribosyl%29-AMP in histidine biosynthesis;Dbxref=Genbank:YP_002403319.1,GeneID:7146434;gbkey=CDS;product=bifunctional phosphoribosyl-AMP cyclohydrolase%2Fphosphoribosyl-ATP pyrophosphatase;protein_id=YP_002403319.1;transl_table=11
NC_011748.1	RefSeq	gene	2328350	2329330	.	-	.	ID=gene2334;Name=cld;Dbxref=GeneID:7146437;gbkey=Gene;gene=cld;locus_tag=EC55989_2286
NC_011748.1	RefSeq	CDS	2328350	2329330	.	-	0	ID=cds2174;Name=YP_002403320.1;Parent=gene2334;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 98241528%3B Product type r : regulator;Dbxref=Genbank:YP_002403320.1,GeneID:7146437;gbkey=CDS;product=regulator of length of O-antigen component of lipopolysaccharide chains;protein_id=YP_002403320.1;transl_table=11
NC_011748.1	RefSeq	gene	2329474	2330640	.	-	.	ID=gene2335;Name=ugd;Dbxref=GeneID:7145720;gbkey=Gene;gene=ugd;locus_tag=EC55989_2287
NC_011748.1	RefSeq	CDS	2329474	2330640	.	-	0	ID=cds2175;Name=YP_002403321.1;Parent=gene2335;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 9150218%2C 96326333%3B Product type e : enzyme;Dbxref=Genbank:YP_002403321.1,GeneID:7145720;gbkey=CDS;product=UDP-glucose 6-dehydrogenase;protein_id=YP_002403321.1;transl_table=11
NC_011748.1	RefSeq	gene	2330888	2332294	.	-	.	ID=gene2336;Name=gnd;Dbxref=GeneID:7147899;gbkey=Gene;gene=gnd;locus_tag=EC55989_2288
NC_011748.1	RefSeq	CDS	2330888	2332294	.	-	0	ID=cds2176;Name=YP_002403322.1;Parent=gene2336;Note=catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate;Dbxref=Genbank:YP_002403322.1,GeneID:7147899;gbkey=CDS;product=6-phosphogluconate dehydrogenase;protein_id=YP_002403322.1;transl_table=11
NC_011748.1	RefSeq	gene	2332415	2333233	.	-	.	ID=gene2337;Name=EC55989_2289;Dbxref=GeneID:7146346;gbkey=Gene;locus_tag=EC55989_2289
NC_011748.1	RefSeq	CDS	2332415	2333233	.	-	0	ID=cds2177;Name=YP_002403323.1;Parent=gene2337;Note=Evidence 2b : Function of strongly homologous gene%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002403323.1,GeneID:7146346;gbkey=CDS;product=glycosyl transferase family protein;protein_id=YP_002403323.1;transl_table=11
NC_011748.1	RefSeq	gene	2333246	2334541	.	-	.	ID=gene2338;Name=EC55989_2290;Dbxref=GeneID:7144747;gbkey=Gene;locus_tag=EC55989_2290
NC_011748.1	RefSeq	CDS	2333246	2334541	.	-	0	ID=cds2178;Name=YP_002403324.1;Parent=gene2338;Note=Evidence 2b : Function of strongly homologous gene%3B PubMedId : 11404020%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002403324.1,GeneID:7144747;gbkey=CDS;product=Wzx;protein_id=YP_002403324.1;transl_table=11
NC_011748.1	RefSeq	gene	2334523	2335746	.	-	.	ID=gene2339;Name=EC55989_2291;Dbxref=GeneID:7144748;gbkey=Gene;locus_tag=EC55989_2291
NC_011748.1	RefSeq	CDS	2334523	2335746	.	-	0	ID=cds2179;Name=YP_002403325.1;Parent=gene2339;Note=Evidence 2b : Function of strongly homologous gene%3B PubMedId : 11404020%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002403325.1,GeneID:7144748;gbkey=CDS;product=WbwB;protein_id=YP_002403325.1;transl_table=11
NC_011748.1	RefSeq	gene	2336861	2337811	.	-	.	ID=gene2340;Name=EC55989_2292;Dbxref=GeneID:7144749;gbkey=Gene;locus_tag=EC55989_2292
NC_011748.1	RefSeq	CDS	2336861	2337811	.	-	0	ID=cds2180;Name=YP_002403326.1;Parent=gene2340;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 11404020;Dbxref=Genbank:YP_002403326.1,GeneID:7144749;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403326.1;transl_table=11
NC_011748.1	RefSeq	gene	2337896	2339059	.	-	.	ID=gene2341;Name=EC55989_2293;Dbxref=GeneID:7144750;gbkey=Gene;locus_tag=EC55989_2293
NC_011748.1	RefSeq	CDS	2337896	2339059	.	-	0	ID=cds2181;Name=YP_002403327.1;Parent=gene2341;Note=Evidence 2b : Function of strongly homologous gene%3B PubMedId : 11404020%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002403327.1,GeneID:7144750;gbkey=CDS;product=NnaA;protein_id=YP_002403327.1;transl_table=11
NC_011748.1	RefSeq	gene	2339056	2340321	.	-	.	ID=gene2342;Name=EC55989_2294;Dbxref=GeneID:7144751;gbkey=Gene;locus_tag=EC55989_2294
NC_011748.1	RefSeq	CDS	2339056	2340321	.	-	0	ID=cds2182;Name=YP_002403328.1;Parent=gene2342;Note=Evidence 2b : Function of strongly homologous gene%3B PubMedId : 11404020%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002403328.1,GeneID:7144751;gbkey=CDS;product=NnaC;protein_id=YP_002403328.1;transl_table=11
NC_011748.1	RefSeq	gene	2340327	2341367	.	-	.	ID=gene2343;Name=EC55989_2295;Dbxref=GeneID:7144752;gbkey=Gene;locus_tag=EC55989_2295
NC_011748.1	RefSeq	CDS	2340327	2341367	.	-	0	ID=cds2183;Name=YP_002403329.1;Parent=gene2343;Note=Evidence 2b : Function of strongly homologous gene%3B PubMedId : 11404020%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002403329.1,GeneID:7144752;gbkey=CDS;product=NnaB;protein_id=YP_002403329.1;transl_table=11
NC_011748.1	RefSeq	gene	2341372	2341992	.	-	.	ID=gene2344;Name=EC55989_2296;Dbxref=GeneID:7144753;gbkey=Gene;locus_tag=EC55989_2296
NC_011748.1	RefSeq	CDS	2341372	2341992	.	-	0	ID=cds2184;Name=YP_002403330.1;Parent=gene2344;Note=Evidence 2b : Function of strongly homologous gene%3B PubMedId : 11404020%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002403330.1,GeneID:7144753;gbkey=CDS;product=WckD;protein_id=YP_002403330.1;transl_table=11
NC_011748.1	RefSeq	gene	2342353	2343246	.	-	.	ID=gene2345;Name=galF;Dbxref=GeneID:7144754;gbkey=Gene;gene=galF;locus_tag=EC55989_2297
NC_011748.1	RefSeq	CDS	2342353	2343246	.	-	0	ID=cds2185;Name=YP_002403331.1;Parent=gene2345;Note=together with GalU subunit composes the UTP--glucose-1-phosphate uridylyltransferase%2C an enzyme that catalyzes the formation of UDP-glucose from UTP and alpha-D-glucose 1-phosphate%3B regulates cellular levels of UDP-glucose;Dbxref=Genbank:YP_002403331.1,GeneID:7144754;gbkey=CDS;product=UTP-glucose-1-phosphate uridylyltransferase;protein_id=YP_002403331.1;transl_table=11
NC_011748.1	RefSeq	gene	2343489	2344484	.	-	.	ID=gene2346;Name=gne;Dbxref=GeneID:7146248;gbkey=Gene;gene=gne;locus_tag=EC55989_2298
NC_011748.1	RefSeq	CDS	2343489	2344484	.	-	0	ID=cds2186;Name=YP_002403332.1;Parent=gene2346;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 11976290%3B Product type e : enzyme;Dbxref=Genbank:YP_002403332.1,GeneID:7146248;gbkey=CDS;product=UDP-N-acetylglucosamine 4-epimerase %28UDP-GlcNAc 4-epimerase%29;protein_id=YP_002403332.1;transl_table=11
NC_011748.1	RefSeq	gene	2344642	2346036	.	-	.	ID=gene2347;Name=wcaM;Dbxref=GeneID:7146347;gbkey=Gene;gene=wcaM;locus_tag=EC55989_2299
NC_011748.1	RefSeq	CDS	2344642	2346036	.	-	0	ID=cds2187;Name=YP_002403333.1;Parent=gene2347;Note=WcaM from Salmonella enterica is essential for biofilm formation on HEp-2 cells and chicken intestinal tissue but not on a plastic surface%3B may be involved in the biosynthesis of colanic acid;Dbxref=Genbank:YP_002403333.1,GeneID:7146347;gbkey=CDS;product=colanic acid biosynthesis protein;protein_id=YP_002403333.1;transl_table=11
NC_011748.1	RefSeq	gene	2346047	2347267	.	-	.	ID=gene2348;Name=wcaL;Dbxref=GeneID:7147972;gbkey=Gene;gene=wcaL;locus_tag=EC55989_2300
NC_011748.1	RefSeq	CDS	2346047	2347267	.	-	0	ID=cds2188;Name=YP_002403334.1;Parent=gene2348;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 96326333%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002403334.1,GeneID:7147972;gbkey=CDS;product=glycosyl transferase family protein;protein_id=YP_002403334.1;transl_table=11
NC_011748.1	RefSeq	gene	2347264	2348544	.	-	.	ID=gene2349;Name=wcaK;Dbxref=GeneID:7147971;gbkey=Gene;gene=wcaK;locus_tag=EC55989_2301
NC_011748.1	RefSeq	CDS	2347264	2348544	.	-	0	ID=cds2189;Name=YP_002403335.1;Parent=gene2349;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 96326333%2C 8759852%2C 11004393%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002403335.1,GeneID:7147971;gbkey=CDS;product=pyruvyl transferase;protein_id=YP_002403335.1;transl_table=11
NC_011748.1	RefSeq	gene	2348829	2350307	.	-	.	ID=gene2350;Name=wzxC;Dbxref=GeneID:7147970;gbkey=Gene;gene=wzxC;locus_tag=EC55989_2302
NC_011748.1	RefSeq	CDS	2348829	2350307	.	-	0	ID=cds2190;Name=YP_002403336.1;Parent=gene2350;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 96326333%2C 8759852%3B Product type pt :  transporter;Dbxref=Genbank:YP_002403336.1,GeneID:7147970;gbkey=CDS;product=colanic acid exporter;protein_id=YP_002403336.1;transl_table=11
NC_011748.1	RefSeq	gene	2350309	2351703	.	-	.	ID=gene2351;Name=wcaJ;Dbxref=GeneID:7147977;gbkey=Gene;gene=wcaJ;locus_tag=EC55989_2303
NC_011748.1	RefSeq	CDS	2350309	2351703	.	-	0	ID=cds2191;Name=YP_002403337.1;Parent=gene2351;Note=WcaJ%3B glucose-1-phosphate transferase responsible for the addition of the first glucose-1-phosphate from UDP-glucose to the lipid carrier undecaprenyl phosphate in the biosynthesis of colanic acid;Dbxref=Genbank:YP_002403337.1,GeneID:7147977;gbkey=CDS;product=UDP-glucose lipid carrier transferase;protein_id=YP_002403337.1;transl_table=11
NC_011748.1	RefSeq	gene	2351758	2353128	.	-	.	ID=gene2352;Name=cpsG;Dbxref=GeneID:7147969;gbkey=Gene;gene=cpsG;locus_tag=EC55989_2304
NC_011748.1	RefSeq	CDS	2351758	2353128	.	-	0	ID=cds2192;Name=YP_002403338.1;Parent=gene2352;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 93106949%2C 96326333%2C 7815923%2C 8759852%3B Product type e : enzyme;Dbxref=Genbank:YP_002403338.1,GeneID:7147969;gbkey=CDS;product=phosphomannomutase;protein_id=YP_002403338.1;transl_table=11
NC_011748.1	RefSeq	gene	2353497	2354933	.	-	.	ID=gene2353;Name=cpsB;Dbxref=GeneID:7145747;gbkey=Gene;gene=cpsB;locus_tag=EC55989_2305
NC_011748.1	RefSeq	CDS	2353497	2354933	.	-	0	ID=cds2193;Name=YP_002403339.1;Parent=gene2353;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 82100097%2C 85006781%2C 92048476%2C 93122523%2C 96326333%2C 7815923%2C 8759852%3B Product type e : enzyme;Dbxref=Genbank:YP_002403339.1,GeneID:7145747;gbkey=CDS;product=mannose-1-phosphate guanylyltransferase;protein_id=YP_002403339.1;transl_table=11
NC_011748.1	RefSeq	gene	2354936	2356159	.	-	.	ID=gene2354;Name=wcaI;Dbxref=GeneID:7145746;gbkey=Gene;gene=wcaI;locus_tag=EC55989_2306
NC_011748.1	RefSeq	CDS	2354936	2356159	.	-	0	ID=cds2194;Name=YP_002403340.1;Parent=gene2354;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 15670885%2C 96326333%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002403340.1,GeneID:7145746;gbkey=CDS;product=glycosyl transferase family protein;protein_id=YP_002403340.1;transl_table=11
NC_011748.1	RefSeq	gene	2356156	2356635	.	-	.	ID=gene2355;Name=nudD;Dbxref=GeneID:7147968;gbkey=Gene;gene=nudD;locus_tag=EC55989_2307
NC_011748.1	RefSeq	CDS	2356156	2356635	.	-	0	ID=cds2195;Name=YP_002403341.1;Parent=gene2355;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 96326333%2C 10913267%2C 7592609%2C 7815923%2C 8759852%3B Product type e : enzyme;Dbxref=Genbank:YP_002403341.1,GeneID:7147968;gbkey=CDS;product=GDP-mannose mannosyl hydrolase;protein_id=YP_002403341.1;transl_table=11
NC_011748.1	RefSeq	gene	2356638	2357603	.	-	.	ID=gene2356;Name=fcl;Dbxref=GeneID:7147038;gbkey=Gene;gene=fcl;locus_tag=EC55989_2308
NC_011748.1	RefSeq	CDS	2356638	2357603	.	-	0	ID=cds2196;Name=YP_002403342.1;Parent=gene2356;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 96326333%2C 98132401%2C 9862812%2C 7815923%2C 8759852%2C 9473059%3B Product type e : enzyme;Dbxref=Genbank:YP_002403342.1,GeneID:7147038;gbkey=CDS;product=bifunctional GDP-fucose synthetase: GDP-4-dehydro-6-deoxy-D-mannose epimerase and GDP-4-dehydro-6-L-deoxygalactose reductase;protein_id=YP_002403342.1;transl_table=11
NC_011748.1	RefSeq	gene	2357606	2358727	.	-	.	ID=gene2357;Name=gmd;Dbxref=GeneID:7146065;gbkey=Gene;gene=gmd;locus_tag=EC55989_2309
NC_011748.1	RefSeq	CDS	2357606	2358727	.	-	0	ID=cds2197;Name=YP_002403343.1;Parent=gene2357;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 20139699%2C 97400210%2C 10673432%2C 7815923%2C 8759852%2C 9257704%2C 14299611%3B Product type e : enzyme;Dbxref=Genbank:YP_002403343.1,GeneID:7146065;gbkey=CDS;product=GDP-D-mannose dehydratase;protein_id=YP_002403343.1;transl_table=11
NC_011748.1	RefSeq	gene	2358754	2359302	.	-	.	ID=gene2358;Name=wcaF;Dbxref=GeneID:7146342;gbkey=Gene;gene=wcaF;locus_tag=EC55989_2310
NC_011748.1	RefSeq	CDS	2358754	2359302	.	-	0	ID=cds2198;Name=YP_002403344.1;Parent=gene2358;Note=acetyltransferase believed to catalyze the addition of the acetyl group that is attached through an O linkage to the first fucosyl residue of the colanic acid repetitive unit %28E unit%29;Dbxref=Genbank:YP_002403344.1,GeneID:7146342;gbkey=CDS;product=colanic acid biosynthesis acetyltransferase WcaF;protein_id=YP_002403344.1;transl_table=11
NC_011748.1	RefSeq	gene	2359318	2360064	.	-	.	ID=gene2359;Name=wcaE;Dbxref=GeneID:7147967;gbkey=Gene;gene=wcaE;locus_tag=EC55989_2311
NC_011748.1	RefSeq	CDS	2359318	2360064	.	-	0	ID=cds2199;Name=YP_002403345.1;Parent=gene2359;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 11371548%2C 96326333%2C 8759852%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002403345.1,GeneID:7147967;gbkey=CDS;product=glycosyl transferase family protein;protein_id=YP_002403345.1;transl_table=11
NC_011748.1	RefSeq	gene	2360075	2361292	.	-	.	ID=gene2360;Name=wcaD;Dbxref=GeneID:7147966;gbkey=Gene;gene=wcaD;locus_tag=EC55989_2312
NC_011748.1	RefSeq	CDS	2360075	2361292	.	-	0	ID=cds2200;Name=YP_002403346.1;Parent=gene2360;Note=essential for colanic acid biosynthesis%3B colanic acid is an exopolysaccharide produced under stress conditions that confers acid and heat tolerance;Dbxref=Genbank:YP_002403346.1,GeneID:7147966;gbkey=CDS;product=colanic acid biosynthesis protein;protein_id=YP_002403346.1;transl_table=11
NC_011748.1	RefSeq	gene	2361267	2362484	.	-	.	ID=gene2361;Name=wcaC;Dbxref=GeneID:7147965;gbkey=Gene;gene=wcaC;locus_tag=EC55989_2313
NC_011748.1	RefSeq	CDS	2361267	2362484	.	-	0	ID=cds2201;Name=YP_002403347.1;Parent=gene2361;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 96326333%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002403347.1,GeneID:7147965;gbkey=CDS;product=glycosyl transferase family protein;protein_id=YP_002403347.1;transl_table=11
NC_011748.1	RefSeq	gene	2362481	2362969	.	-	.	ID=gene2362;Name=wcaB;Dbxref=GeneID:7147964;gbkey=Gene;gene=wcaB;locus_tag=EC55989_2314
NC_011748.1	RefSeq	CDS	2362481	2362969	.	-	0	ID=cds2202;Name=YP_002403348.1;Parent=gene2362;Note=acetyltransferase believed to catalyze the addition of the acetyl group that is attached through an O linkage to the first fucosyl residue of the colanic acid repetitive unit %28E unit%29%3B wcaB is induced in sessile bacteria and by osmotic shock%2C and repressed when grown in rich medium;Dbxref=Genbank:YP_002403348.1,GeneID:7147964;gbkey=CDS;product=colanic acid biosynthesis acetyltransferase WcaB;protein_id=YP_002403348.1;transl_table=11
NC_011748.1	RefSeq	gene	2362972	2363811	.	-	.	ID=gene2363;Name=wcaA;Dbxref=GeneID:7147963;gbkey=Gene;gene=wcaA;locus_tag=EC55989_2315
NC_011748.1	RefSeq	CDS	2362972	2363811	.	-	0	ID=cds2203;Name=YP_002403349.1;Parent=gene2363;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 96326333%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002403349.1,GeneID:7147963;gbkey=CDS;product=glycosyl transferase family protein;protein_id=YP_002403349.1;transl_table=11
NC_011748.1	RefSeq	gene	2363989	2366151	.	-	.	ID=gene2364;Name=wzc;Dbxref=GeneID:7147962;gbkey=Gene;gene=wzc;locus_tag=EC55989_2316
NC_011748.1	RefSeq	CDS	2363989	2366151	.	-	0	ID=cds2204;Name=YP_002403350.1;Parent=gene2364;Note=Wzc%3B catalyzes the autophosphorylation on tyrosine residues which downregulates the biosynthesis of colonic acid %28an extracellular polysaccharide%29;Dbxref=Genbank:YP_002403350.1,GeneID:7147962;gbkey=CDS;product=tyrosine kinase;protein_id=YP_002403350.1;transl_table=11
NC_011748.1	RefSeq	gene	2366154	2366597	.	-	.	ID=gene2365;Name=wzb;Dbxref=GeneID:7147976;gbkey=Gene;gene=wzb;locus_tag=EC55989_2317
NC_011748.1	RefSeq	CDS	2366154	2366597	.	-	0	ID=cds2205;Name=YP_002403351.1;Parent=gene2365;Note=Wzb shows phosphatase activity towards the autophosphorylated Wzc protein%2C which induces colanic acid biosynthesis%3B catalyzes the phosphorylation of UDP-glucose dehydrogenase%2C an enzyme involved in colanic acid biosynthesis;Dbxref=Genbank:YP_002403351.1,GeneID:7147976;gbkey=CDS;product=tyrosine phosphatase;protein_id=YP_002403351.1;transl_table=11
NC_011748.1	RefSeq	gene	2366603	2367742	.	-	.	ID=gene2366;Name=wza;Dbxref=GeneID:7147975;gbkey=Gene;gene=wza;locus_tag=EC55989_2318
NC_011748.1	RefSeq	CDS	2366603	2367742	.	-	0	ID=cds2206;Name=YP_002403352.1;Parent=gene2366;Note=Evidence 2b : Function of strongly homologous gene%3B PubMedId : 15090537%2C 96326333%2C 8759852%2C 8763957%3B Product type lp : lipoprotein;Dbxref=Genbank:YP_002403352.1,GeneID:7147975;gbkey=CDS;product=lipoprotein required for capsular polysaccharide translocation through the outer membrane;protein_id=YP_002403352.1;transl_table=11
NC_011748.1	RefSeq	gene	2368401	2369984	.	+	.	ID=gene2367;Name=yegH;Dbxref=GeneID:7147974;gbkey=Gene;gene=yegH;locus_tag=EC55989_2319
NC_011748.1	RefSeq	CDS	2368401	2369984	.	+	0	ID=cds2207;Name=YP_002403353.1;Parent=gene2367;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002403353.1,GeneID:7147974;gbkey=CDS;product=fused membrane protein %3B membrane protein;protein_id=YP_002403353.1;transl_table=11
NC_011748.1	RefSeq	gene	2370258	2372111	.	-	.	ID=gene2368;Name=asmA;Dbxref=GeneID:7148629;gbkey=Gene;gene=asmA;locus_tag=EC55989_2320
NC_011748.1	RefSeq	CDS	2370258	2372111	.	-	0	ID=cds2208;Name=YP_002403354.1;Parent=gene2368;Note=YegA%3B inner membrane protein involved in the assembly of outer membrane proteins %28OMPs%29%3B asmA-null mutants show low lipopolysaccharide %28LPS%29 levels%2C suggesting a role in LPS biogenesis and%2For in restricting outer membrane fluidity%2C resulting on altered assembly of OMPs;Dbxref=Genbank:YP_002403354.1,GeneID:7148629;gbkey=CDS;product=assembly protein;protein_id=YP_002403354.1;transl_table=11
NC_011748.1	RefSeq	gene	2372133	2372714	.	-	.	ID=gene2369;Name=dcd;Dbxref=GeneID:7145566;gbkey=Gene;gene=dcd;locus_tag=EC55989_2321
NC_011748.1	RefSeq	CDS	2372133	2372714	.	-	0	ID=cds2209;Name=YP_002403355.1;Parent=gene2369;Note=Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis;Dbxref=Genbank:YP_002403355.1,GeneID:7145566;gbkey=CDS;product=deoxycytidine triphosphate deaminase;protein_id=YP_002403355.1;transl_table=11
NC_011748.1	RefSeq	gene	2372806	2373447	.	-	.	ID=gene2370;Name=udk;Dbxref=GeneID:7145855;gbkey=Gene;gene=udk;locus_tag=EC55989_2322
NC_011748.1	RefSeq	CDS	2372806	2373447	.	-	0	ID=cds2210;Name=YP_002403356.1;Parent=gene2370;Note=functions in pyrimidine salvage%3B pyrimidine ribonucleoside kinase%3B phosphorylates nucleosides or dinucleosides to make UMP or CMP using ATP or GTP as the donor;Dbxref=Genbank:YP_002403356.1,GeneID:7145855;gbkey=CDS;product=uridine kinase;protein_id=YP_002403356.1;transl_table=11
NC_011748.1	RefSeq	gene	2373765	2377082	.	+	.	ID=gene2371;Name=yegE;Dbxref=GeneID:7147897;gbkey=Gene;gene=yegE;locus_tag=EC55989_2323
NC_011748.1	RefSeq	CDS	2373765	2377082	.	+	0	ID=cds2211;Name=YP_002403357.1;Parent=gene2371;Note=contains a MASE1 %28Membrane-Associated Sensor%29 domain%3B potentially involved in signal transduction;Dbxref=Genbank:YP_002403357.1,GeneID:7147897;gbkey=CDS;product=sensor protein;protein_id=YP_002403357.1;transl_table=11
NC_011748.1	RefSeq	gene	2377121	2377978	.	-	.	ID=gene2372;Name=alkA;Dbxref=GeneID:7148628;gbkey=Gene;gene=alkA;locus_tag=EC55989_2324
NC_011748.1	RefSeq	CDS	2377121	2377978	.	-	0	ID=cds2212;Name=YP_002403358.1;Parent=gene2372;Note=inducible%2C catalyzes the hydrolysis of alkylated DNA%2C releasing 3-methyladenine%2C 3-methylguanine%2C 7-methylguanine and 7-methyladenine;Dbxref=Genbank:YP_002403358.1,GeneID:7148628;gbkey=CDS;product=3-methyladenine DNA glycosylase;protein_id=YP_002403358.1;transl_table=11
NC_011748.1	RefSeq	gene	2378112	2379464	.	+	.	ID=gene2373;Name=yegD;Dbxref=GeneID:7145481;gbkey=Gene;gene=yegD;locus_tag=EC55989_2326
NC_011748.1	RefSeq	CDS	2378112	2379464	.	+	0	ID=cds2213;Name=YP_002403359.1;Parent=gene2373;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 6094528%2C 7940673%2C 7984428%3B Product type pf :  factor;Dbxref=Genbank:YP_002403359.1,GeneID:7145481;gbkey=CDS;product=chaperone;protein_id=YP_002403359.1;transl_table=11
NC_011748.1	RefSeq	gene	2379476	2381425	.	-	.	ID=gene2374;Name=yegI;Dbxref=GeneID:7148627;gbkey=Gene;gene=yegI;locus_tag=EC55989_2327
NC_011748.1	RefSeq	CDS	2379476	2381425	.	-	0	ID=cds2214;Name=YP_002403360.1;Parent=gene2374;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403360.1,GeneID:7148627;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403360.1;transl_table=11
NC_011748.1	RefSeq	gene	2381413	2382174	.	-	.	ID=gene2375;Name=yegK;Dbxref=GeneID:7148630;gbkey=Gene;gene=yegK;locus_tag=EC55989_2328
NC_011748.1	RefSeq	CDS	2381413	2382174	.	-	0	ID=cds2215;Name=YP_002403361.1;Parent=gene2375;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403361.1,GeneID:7148630;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403361.1;transl_table=11
NC_011748.1	RefSeq	gene	2382171	2382830	.	-	.	ID=gene2376;Name=yegL;Dbxref=GeneID:7148631;gbkey=Gene;gene=yegL;locus_tag=EC55989_2329
NC_011748.1	RefSeq	CDS	2382171	2382830	.	-	0	ID=cds2216;Name=YP_002403362.1;Parent=gene2376;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403362.1,GeneID:7148631;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403362.1;transl_table=11
NC_011748.1	RefSeq	gene	2382995	2383122	.	+	.	ID=gene2377;Name=rygC;Dbxref=GeneID:7148632;gbkey=Gene;gene=rygC;locus_tag=EC55989_misc_RNA_48
NC_011748.1	RefSeq	transcript	2382995	2383122	.	+	.	ID=rna92;Parent=gene2377;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 11445539%3B Product type n : RNA;Dbxref=GeneID:7148632;gbkey=misc_RNA;product=RygC
NC_011748.1	RefSeq	exon	2382995	2383122	.	+	.	ID=id183;Parent=rna92;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 11445539%3B Product type n : RNA;Dbxref=GeneID:7148632;gbkey=misc_RNA;product=RygC
NC_011748.1	RefSeq	gene	2383001	2383124	.	+	.	ID=gene2378;Name=rygD;Dbxref=GeneID:7147585;gbkey=Gene;gene=rygD;locus_tag=EC55989_misc_RNA_49
NC_011748.1	RefSeq	transcript	2383001	2383124	.	+	.	ID=rna93;Parent=gene2378;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 11445539%3B Product type n : RNA;Dbxref=GeneID:7147585;gbkey=misc_RNA;product=RygD
NC_011748.1	RefSeq	exon	2383001	2383124	.	+	.	ID=id184;Parent=rna93;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 11445539%3B Product type n : RNA;Dbxref=GeneID:7147585;gbkey=misc_RNA;product=RygD
NC_011748.1	RefSeq	gene	2383640	2383782	.	+	.	ID=gene2379;Name=EC55989_misc_RNA_50;Dbxref=GeneID:7147588;gbkey=Gene;locus_tag=EC55989_misc_RNA_50
NC_011748.1	RefSeq	transcript	2383640	2383782	.	+	.	ID=rna94;Parent=gene2379;Dbxref=GeneID:7147588;gbkey=misc_RNA;product=QUAD
NC_011748.1	RefSeq	exon	2383640	2383782	.	+	.	ID=id185;Parent=rna94;Dbxref=GeneID:7147588;gbkey=misc_RNA;product=QUAD
NC_011748.1	RefSeq	gene	2384046	2385293	.	+	.	ID=gene2380;Name=mdtA;Dbxref=GeneID:7145307;gbkey=Gene;gene=mdtA;locus_tag=EC55989_2330
NC_011748.1	RefSeq	CDS	2384046	2385293	.	+	0	ID=cds2217;Name=YP_002403363.1;Parent=gene2380;Note=Part of a tripartite efflux system composed of MdtA%2C MdtB and MdtC which confers resistance against novobiocin and deoxycholate;Dbxref=Genbank:YP_002403363.1,GeneID:7145307;gbkey=CDS;product=multidrug efflux system subunit MdtA;protein_id=YP_002403363.1;transl_table=11
NC_011748.1	RefSeq	gene	2385293	2388415	.	+	.	ID=gene2381;Name=mdtB;Dbxref=GeneID:7146802;gbkey=Gene;gene=mdtB;locus_tag=EC55989_2331
NC_011748.1	RefSeq	CDS	2385293	2388415	.	+	0	ID=cds2218;Name=YP_002403364.1;Parent=gene2381;Note=Part of a tripartite efflux system composed of MdtA%2C MdtB and MdtC which confers resistance against novobiocin and deoxycholate;Dbxref=Genbank:YP_002403364.1,GeneID:7146802;gbkey=CDS;product=multidrug efflux system subunit MdtB;protein_id=YP_002403364.1;transl_table=11
NC_011748.1	RefSeq	gene	2388416	2391493	.	+	.	ID=gene2382;Name=mdtC;Dbxref=GeneID:7146803;gbkey=Gene;gene=mdtC;locus_tag=EC55989_2332
NC_011748.1	RefSeq	CDS	2388416	2391493	.	+	0	ID=cds2219;Name=YP_002403365.1;Parent=gene2382;Note=Part of a tripartite efflux system composed of MdtA%2C MdtB and MdtC%3B confers resistance against novobiocin and deoxycholate;Dbxref=Genbank:YP_002403365.1,GeneID:7146803;gbkey=CDS;product=multidrug efflux system subunit MdtC;protein_id=YP_002403365.1;transl_table=11
NC_011748.1	RefSeq	gene	2391494	2392909	.	+	.	ID=gene2383;Name=mdtD;Dbxref=GeneID:7146804;gbkey=Gene;gene=mdtD;locus_tag=EC55989_2333
NC_011748.1	RefSeq	CDS	2391494	2392909	.	+	0	ID=cds2220;Name=YP_002403366.1;Parent=gene2383;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 12107134%2C 21450803%2C 8282725%3B Product type t : transporter;Dbxref=Genbank:YP_002403366.1,GeneID:7146804;gbkey=CDS;product=multidrug efflux system protein MdtE;protein_id=YP_002403366.1;transl_table=11
NC_011748.1	RefSeq	gene	2392906	2394309	.	+	.	ID=gene2384;Name=baeS;Dbxref=GeneID:7146805;gbkey=Gene;gene=baeS;locus_tag=EC55989_2334
NC_011748.1	RefSeq	CDS	2392906	2394309	.	+	0	ID=cds2221;Name=YP_002403367.1;Parent=gene2384;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 94110256%2C 8282725%3B Product type r : regulator;Dbxref=Genbank:YP_002403367.1,GeneID:7146805;gbkey=CDS;product=signal transduction histidine-protein kinase BaeS;protein_id=YP_002403367.1;transl_table=11
NC_011748.1	RefSeq	gene	2394306	2395028	.	+	.	ID=gene2385;Name=baeR;Dbxref=GeneID:7145594;gbkey=Gene;gene=baeR;locus_tag=EC55989_2335
NC_011748.1	RefSeq	CDS	2394306	2395028	.	+	0	ID=cds2222;Name=YP_002403368.1;Parent=gene2385;Note=response regulator in two-component regulatory system with BaeS%3B regulator of RNA synthesis%2C flagellar biosynthesis%2C chemotaxis and transport;Dbxref=Genbank:YP_002403368.1,GeneID:7145594;gbkey=CDS;product=DNA-binding transcriptional regulator BaeR;protein_id=YP_002403368.1;transl_table=11
NC_011748.1	RefSeq	gene	2395219	2395551	.	+	.	ID=gene2386;Name=yegP;Dbxref=GeneID:7145593;gbkey=Gene;gene=yegP;locus_tag=EC55989_2337
NC_011748.1	RefSeq	CDS	2395219	2395551	.	+	0	ID=cds2223;Name=YP_002403369.1;Parent=gene2386;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403369.1,GeneID:7145593;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403369.1;transl_table=11
NC_011748.1	RefSeq	gene	2395760	2396056	.	+	.	ID=gene2387;Name=EC55989_2338;Dbxref=GeneID:7148633;gbkey=Gene;locus_tag=EC55989_2338
NC_011748.1	RefSeq	CDS	2395760	2396056	.	+	0	ID=cds2224;Name=YP_002403370.1;Parent=gene2387;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403370.1,GeneID:7148633;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403370.1;transl_table=11
NC_011748.1	RefSeq	gene	2396058	2396354	.	+	.	ID=gene2388;Name=EC55989_2339;Dbxref=GeneID:7144755;gbkey=Gene;locus_tag=EC55989_2339
NC_011748.1	RefSeq	CDS	2396058	2396354	.	+	0	ID=cds2225;Name=YP_002403371.1;Parent=gene2388;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403371.1,GeneID:7144755;gbkey=CDS;product=plasmid stabilisation system protein;protein_id=YP_002403371.1;transl_table=11
NC_011748.1	RefSeq	gene	2396457	2397818	.	+	.	ID=gene2389;Name=yegQ;Dbxref=GeneID:7144756;gbkey=Gene;gene=yegQ;locus_tag=EC55989_2340
NC_011748.1	RefSeq	CDS	2396457	2397818	.	+	0	ID=cds2226;Name=YP_002403372.1;Parent=gene2389;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002403372.1,GeneID:7144756;gbkey=CDS;product=peptidase;protein_id=YP_002403372.1;transl_table=11
NC_011748.1	RefSeq	gene	2397901	2397986	.	+	.	ID=gene2390;Name=ryeE;Dbxref=GeneID:7148634;gbkey=Gene;gene=ryeE;locus_tag=EC55989_misc_RNA_51
NC_011748.1	RefSeq	transcript	2397901	2397986	.	+	.	ID=rna95;Parent=gene2390;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 11445539%3B Product type n : RNA;Dbxref=GeneID:7148634;gbkey=misc_RNA;product=RyeE
NC_011748.1	RefSeq	exon	2397901	2397986	.	+	.	ID=id186;Parent=rna95;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 11445539%3B Product type n : RNA;Dbxref=GeneID:7148634;gbkey=misc_RNA;product=RyeE
NC_011748.1	RefSeq	gene	2398011	2398160	.	-	.	ID=gene2391;Name=EC55989_2341;Dbxref=GeneID:7147580;gbkey=Gene;locus_tag=EC55989_2341
NC_011748.1	RefSeq	CDS	2398011	2398160	.	-	0	ID=cds2227;Name=YP_002403373.1;Parent=gene2391;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403373.1,GeneID:7147580;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403373.1;transl_table=11
NC_011748.1	RefSeq	gene	2398148	2398465	.	-	.	ID=gene2392;Name=yegR;Dbxref=GeneID:7144757;gbkey=Gene;gene=yegR;locus_tag=EC55989_2342
NC_011748.1	RefSeq	CDS	2398148	2398465	.	-	0	ID=cds2228;Name=YP_002403374.1;Parent=gene2392;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403374.1,GeneID:7144757;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403374.1;transl_table=11
NC_011748.1	RefSeq	gene	2398880	2399779	.	+	.	ID=gene2393;Name=yegS;Dbxref=GeneID:7148635;gbkey=Gene;gene=yegS;locus_tag=EC55989_2343
NC_011748.1	RefSeq	CDS	2398880	2399779	.	+	0	ID=cds2229;Name=YP_002403375.1;Parent=gene2393;Note=cytosolic protein with phosphatidylglycerol kinase activity%3B undetermined physiological role;Dbxref=Genbank:YP_002403375.1,GeneID:7148635;gbkey=CDS;product=lipid kinase;protein_id=YP_002403375.1;transl_table=11
NC_011748.1	RefSeq	gene	2399861	2400640	.	-	.	ID=gene2394;Name=gatR;Dbxref=GeneID:7148636;gbkey=Gene;gene=gatR;locus_tag=EC55989_2344
NC_011748.1	RefSeq	CDS	2399861	2400640	.	-	0	ID=cds2230;Name=YP_002403376.1;Parent=gene2394;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 7772602%3B Product type r : regulator;Dbxref=Genbank:YP_002403376.1,GeneID:7148636;gbkey=CDS;product=Galactitol utilization operon repressor;protein_id=YP_002403376.1;transl_table=11
NC_011748.1	RefSeq	gene	2400740	2401780	.	-	.	ID=gene2395;Name=gatD;Dbxref=GeneID:7146267;gbkey=Gene;gene=gatD;locus_tag=EC55989_2345
NC_011748.1	RefSeq	CDS	2400740	2401780	.	-	0	ID=cds2231;Name=YP_002403377.1;Parent=gene2395;Note=Zn-dependent%3B NAD%28P%29-binding%3B catalyzes the formation of tagatose-6-phosphate from galactitol-1-phosphate;Dbxref=Genbank:YP_002403377.1,GeneID:7146267;gbkey=CDS;product=galactitol-1-phosphate dehydrogenase;protein_id=YP_002403377.1;transl_table=11
NC_011748.1	RefSeq	gene	2401828	2403183	.	-	.	ID=gene2396;Name=gatC;Dbxref=GeneID:7146266;gbkey=Gene;gene=gatC;locus_tag=EC55989_2346
NC_011748.1	RefSeq	CDS	2401828	2403183	.	-	0	ID=cds2232;Name=YP_002403378.1;Parent=gene2396;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 76024805%2C 77192083%2C 97113438%2C 7772602%3B Product type t : transporter;Dbxref=Genbank:YP_002403378.1,GeneID:7146266;gbkey=CDS;product=PTS system galactitol-specific transporter subunit IIC;protein_id=YP_002403378.1;transl_table=11
NC_011748.1	RefSeq	gene	2403187	2403471	.	-	.	ID=gene2397;Name=gatB;Dbxref=GeneID:7146265;gbkey=Gene;gene=gatB;locus_tag=EC55989_2347
NC_011748.1	RefSeq	CDS	2403187	2403471	.	-	0	ID=cds2233;Name=YP_002403379.1;Parent=gene2397;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;Dbxref=Genbank:YP_002403379.1,GeneID:7146265;gbkey=CDS;product=PTS system galactitol-specific transporter subunit IIB;protein_id=YP_002403379.1;transl_table=11
NC_011748.1	RefSeq	gene	2403502	2403954	.	-	.	ID=gene2398;Name=gatA;Dbxref=GeneID:7146264;gbkey=Gene;gene=gatA;locus_tag=EC55989_2348
NC_011748.1	RefSeq	CDS	2403502	2403954	.	-	0	ID=cds2234;Name=YP_002403380.1;Parent=gene2398;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;Dbxref=Genbank:YP_002403380.1,GeneID:7146264;gbkey=CDS;product=PTS system galactitol-specific transporter subunit IIA;protein_id=YP_002403380.1;transl_table=11
NC_011748.1	RefSeq	gene	2403964	2404800	.	-	.	ID=gene2399;Name=gatZ;Dbxref=GeneID:7146263;gbkey=Gene;gene=gatZ;locus_tag=EC55989_2349;pseudo=true
NC_011748.1	RefSeq	region	2403964	2404800	.	-	.	ID=id187;Note=fragment of D-tagatose 1%2C6-bisphosphate aldolase 2%2C subunit %28part 2%29%3BEvidence 7 : Gene remnant%3B Product type e : enzyme;Dbxref=GeneID:7146263;gbkey=misc_feature
NC_011748.1	RefSeq	gene	2404742	2405221	.	-	.	ID=gene2400;Name=gatZ;Dbxref=GeneID:7146269;gbkey=Gene;gene=gatZ;locus_tag=EC55989_2350;pseudo=true
NC_011748.1	RefSeq	region	2404742	2405221	.	-	.	ID=id188;Note=fragment of D-tagatose 1%2C6-bisphosphate aldolase 2%2C subunit %28part 1%29%3BEvidence 7 : Gene remnant%3B Product type e : enzyme;Dbxref=GeneID:7146269;gbkey=misc_feature
NC_011748.1	RefSeq	gene	2405250	2406104	.	-	.	ID=gene2401;Name=gatY;Dbxref=GeneID:7146270;gbkey=Gene;gene=gatY;locus_tag=EC55989_2351
NC_011748.1	RefSeq	CDS	2405250	2406104	.	-	0	ID=cds2235;Name=YP_002403381.1;Parent=gene2401;Note=catalyzes the reversible reaction of dihydroxyacetone phosphate with glyceraldehyde 3-phosphate to produce tagatose 1%2C6-bisphosphate%3B in enteric bacteria there are two D-tagatose 1%2C6-bisphosphate-specific aldolases: KbaY %28also called AgaY%29%2C involved in catabolism of N-acetyl-galactosamine and D-galactosamine%2C and GatY which is part of the galactitol catabolism pathway;Dbxref=Genbank:YP_002403381.1,GeneID:7146270;gbkey=CDS;product=tagatose-bisphosphate aldolase;protein_id=YP_002403381.1;transl_table=11
NC_011748.1	RefSeq	gene	2406414	2407466	.	-	.	ID=gene2402;Name=fbaB;Dbxref=GeneID:7146268;gbkey=Gene;gene=fbaB;locus_tag=EC55989_2352
NC_011748.1	RefSeq	CDS	2406414	2407466	.	-	0	ID=cds2236;Name=YP_002403382.1;Parent=gene2402;Note=catalyzes the formation of glycerone phosphate and D-glyceraldehyde 3-phosphate from D-fructose 1%2C6-bisphosphate;Dbxref=Genbank:YP_002403382.1,GeneID:7146268;gbkey=CDS;product=fructose-bisphosphate aldolase;protein_id=YP_002403382.1;transl_table=11
NC_011748.1	RefSeq	gene	2407723	2409000	.	+	.	ID=gene2403;Name=yegT;Dbxref=GeneID:7146063;gbkey=Gene;gene=yegT;locus_tag=EC55989_2353
NC_011748.1	RefSeq	CDS	2407723	2409000	.	+	0	ID=cds2237;Name=YP_002403383.1;Parent=gene2403;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002403383.1,GeneID:7146063;gbkey=CDS;product=hydrophilic substrate transporter%3B MFS superfamily;protein_id=YP_002403383.1;transl_table=11
NC_011748.1	RefSeq	gene	2408997	2410001	.	+	.	ID=gene2404;Name=yegU;Dbxref=GeneID:7148637;gbkey=Gene;gene=yegU;locus_tag=EC55989_2354
NC_011748.1	RefSeq	CDS	2408997	2410001	.	+	0	ID=cds2238;Name=YP_002403384.1;Parent=gene2404;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002403384.1,GeneID:7148637;gbkey=CDS;product=%28phospho%29hydrolase;protein_id=YP_002403384.1;transl_table=11
NC_011748.1	RefSeq	gene	2409998	2410963	.	+	.	ID=gene2405;Name=yegV;Dbxref=GeneID:7148638;gbkey=Gene;gene=yegV;locus_tag=EC55989_2355
NC_011748.1	RefSeq	CDS	2409998	2410963	.	+	0	ID=cds2239;Name=YP_002403385.1;Parent=gene2405;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002403385.1,GeneID:7148638;gbkey=CDS;product=kinase;protein_id=YP_002403385.1;transl_table=11
NC_011748.1	RefSeq	gene	2410937	2411683	.	-	.	ID=gene2406;Name=yegW;Dbxref=GeneID:7148639;gbkey=Gene;gene=yegW;locus_tag=EC55989_2356
NC_011748.1	RefSeq	CDS	2410937	2411683	.	-	0	ID=cds2240;Name=YP_002403386.1;Parent=gene2406;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pr :  regulator;Dbxref=Genbank:YP_002403386.1,GeneID:7148639;gbkey=CDS;product=DNA-binding transcriptional regulator;protein_id=YP_002403386.1;transl_table=11
NC_011748.1	RefSeq	gene	2411735	2412553	.	-	.	ID=gene2407;Name=yegX;Dbxref=GeneID:7148640;gbkey=Gene;gene=yegX;locus_tag=EC55989_2357
NC_011748.1	RefSeq	CDS	2411735	2412553	.	-	0	ID=cds2241;Name=YP_002403387.1;Parent=gene2407;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002403387.1,GeneID:7148640;gbkey=CDS;product=membrane-bound hydrolase;protein_id=YP_002403387.1;transl_table=11
NC_011748.1	RefSeq	gene	2412618	2413418	.	-	.	ID=gene2408;Name=thiD;Dbxref=GeneID:7148641;gbkey=Gene;gene=thiD;locus_tag=EC55989_2358
NC_011748.1	RefSeq	CDS	2412618	2413418	.	-	0	ID=cds2242;Name=YP_002403388.1;Parent=gene2408;Note=catalyzes the formation of 4-amino-2-methyl-5-diphosphomethylpyrimidine;Dbxref=Genbank:YP_002403388.1,GeneID:7148641;gbkey=CDS;product=phosphomethylpyrimidine kinase;protein_id=YP_002403388.1;transl_table=11
NC_011748.1	RefSeq	gene	2413415	2414203	.	-	.	ID=gene2409;Name=thiM;Dbxref=GeneID:7147783;gbkey=Gene;gene=thiM;locus_tag=EC55989_2359
NC_011748.1	RefSeq	CDS	2413415	2414203	.	-	0	ID=cds2243;Name=YP_002403389.1;Parent=gene2409;Note=catalyzes the formation of 4-methyl-5-%282-phosphoethyl%29-thiazole and ADP from 4-methyl-5-%282-hydroxyethyl%29-thiazole and ATP;Dbxref=Genbank:YP_002403389.1,GeneID:7147783;gbkey=CDS;product=hydroxyethylthiazole kinase;protein_id=YP_002403389.1;transl_table=11
NC_011748.1	RefSeq	gene	2414238	2414334	.	-	.	ID=gene2410;Name=EC55989_misc_RNA_52;Dbxref=GeneID:7147790;gbkey=Gene;locus_tag=EC55989_misc_RNA_52
NC_011748.1	RefSeq	transcript	2414238	2414334	.	-	.	ID=rna96;Parent=gene2410;Dbxref=GeneID:7147790;gbkey=misc_RNA;product=TPP
NC_011748.1	RefSeq	exon	2414238	2414334	.	-	.	ID=id189;Parent=rna96;Dbxref=GeneID:7147790;gbkey=misc_RNA;product=TPP
NC_011748.1	RefSeq	gene	2414426	2414698	.	-	.	ID=gene2411;Name=yohL;Dbxref=GeneID:7145308;gbkey=Gene;gene=yohL;locus_tag=EC55989_2360
NC_011748.1	RefSeq	CDS	2414426	2414698	.	-	0	ID=cds2244;Name=YP_002403390.1;Parent=gene2411;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403390.1,GeneID:7145308;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403390.1;transl_table=11
NC_011748.1	RefSeq	gene	2414819	2415643	.	+	.	ID=gene2412;Name=rncA;Dbxref=GeneID:7149357;gbkey=Gene;gene=rncA;locus_tag=EC55989_2361
NC_011748.1	RefSeq	CDS	2414819	2415643	.	+	0	ID=cds2245;Name=YP_002403391.1;Parent=gene2412;Note=membrane protein conferring nickel and cobalt resistance;Dbxref=Genbank:YP_002403391.1,GeneID:7149357;gbkey=CDS;product=nickel%2Fcobalt efflux protein RcnA;protein_id=YP_002403391.1;transl_table=11
NC_011748.1	RefSeq	gene	2415682	2416200	.	+	.	ID=gene2413;Name=yohN;Dbxref=GeneID:7147446;gbkey=Gene;gene=yohN;locus_tag=EC55989_2362
NC_011748.1	RefSeq	CDS	2415682	2416200	.	+	0	ID=cds2246;Name=YP_002403392.1;Parent=gene2413;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403392.1,GeneID:7147446;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403392.1;transl_table=11
NC_011748.1	RefSeq	gene	2416282	2417316	.	-	.	ID=gene2414;Name=yehA;Dbxref=GeneID:7149358;gbkey=Gene;gene=yehA;locus_tag=EC55989_2363
NC_011748.1	RefSeq	CDS	2416282	2417316	.	-	0	ID=cds2247;Name=YP_002403393.1;Parent=gene2414;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type ps :  structure;Dbxref=Genbank:YP_002403393.1,GeneID:7149358;gbkey=CDS;product=fimbrial-like adhesin protein;protein_id=YP_002403393.1;transl_table=11
NC_011748.1	RefSeq	gene	2417332	2419812	.	-	.	ID=gene2415;Name=yehB;Dbxref=GeneID:7148642;gbkey=Gene;gene=yehB;locus_tag=EC55989_2364
NC_011748.1	RefSeq	CDS	2417332	2419812	.	-	0	ID=cds2248;Name=YP_002403394.1;Parent=gene2415;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002403394.1,GeneID:7148642;gbkey=CDS;product=outer membrane protein;protein_id=YP_002403394.1;transl_table=11
NC_011748.1	RefSeq	gene	2419828	2420502	.	-	.	ID=gene2416;Name=yehC;Dbxref=GeneID:7148643;gbkey=Gene;gene=yehC;locus_tag=EC55989_2365
NC_011748.1	RefSeq	CDS	2419828	2420502	.	-	0	ID=cds2249;Name=YP_002403395.1;Parent=gene2416;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pf :  factor;Dbxref=Genbank:YP_002403395.1,GeneID:7148643;gbkey=CDS;product=membrane-associated pilin chaperone;protein_id=YP_002403395.1;transl_table=11
NC_011748.1	RefSeq	gene	2420583	2421125	.	-	.	ID=gene2417;Name=yehD;Dbxref=GeneID:7148644;gbkey=Gene;gene=yehD;locus_tag=EC55989_2366
NC_011748.1	RefSeq	CDS	2420583	2421125	.	-	0	ID=cds2250;Name=YP_002403396.1;Parent=gene2417;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type ps :  structure;Dbxref=Genbank:YP_002403396.1,GeneID:7148644;gbkey=CDS;product=fimbrial-like adhesin protein;protein_id=YP_002403396.1;transl_table=11
NC_011748.1	RefSeq	gene	2421418	2421699	.	-	.	ID=gene2418;Name=yehE;Dbxref=GeneID:7148645;gbkey=Gene;gene=yehE;locus_tag=EC55989_2367
NC_011748.1	RefSeq	CDS	2421418	2421699	.	-	0	ID=cds2251;Name=YP_002403397.1;Parent=gene2418;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403397.1,GeneID:7148645;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403397.1;transl_table=11
NC_011748.1	RefSeq	gene	2421962	2423071	.	-	.	ID=gene2419;Name=mrp;Dbxref=GeneID:7148646;gbkey=Gene;gene=mrp;locus_tag=EC55989_2368
NC_011748.1	RefSeq	CDS	2421962	2423071	.	-	0	ID=cds2252;Name=YP_002403398.1;Parent=gene2419;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 91080852%2C 15601724%2C 2259334%3B Product type t : transporter;Dbxref=Genbank:YP_002403398.1,GeneID:7148646;gbkey=CDS;product=ATPase;protein_id=YP_002403398.1;transl_table=11
NC_011748.1	RefSeq	gene	2423203	2425236	.	+	.	ID=gene2420;Name=metG;Dbxref=GeneID:7146905;gbkey=Gene;gene=metG;locus_tag=EC55989_2369
NC_011748.1	RefSeq	CDS	2423203	2425236	.	+	0	ID=cds2253;Name=YP_002403399.1;Parent=gene2420;Note=methionine--tRNA ligase%3B MetRS%3B adds methionine to tRNA%28Met%29 with cleavage of ATP to AMP and diphosphate%3B some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not%3B four subfamilies exist based on sequence motifs and zinc content;Dbxref=Genbank:YP_002403399.1,GeneID:7146905;gbkey=CDS;product=methionyl-tRNA synthetase;protein_id=YP_002403399.1;transl_table=11
NC_011748.1	RefSeq	gene	2425377	2426381	.	+	.	ID=gene2421;Name=EC55989_2370;Dbxref=GeneID:7146829;gbkey=Gene;locus_tag=EC55989_2370;pseudo=true
NC_011748.1	RefSeq	region	2425377	2426381	.	+	.	ID=id190;Note=fragment of  Molybdate metabolism regulator %28molR%29 %28partial%29%3BEvidence 7 : Gene remnant%3B Product type pr :  regulator;Dbxref=GeneID:7146829;gbkey=misc_feature
NC_011748.1	RefSeq	gene	2426410	2426685	.	+	.	ID=gene2422;Name=insA;Dbxref=GeneID:7144758;gbkey=Gene;gene=insA;locus_tag=EC55989_2371
NC_011748.1	RefSeq	CDS	2426410	2426685	.	+	0	ID=cds2254;Name=YP_002403400.1;Parent=gene2422;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 9689094%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002403400.1,GeneID:7144758;gbkey=CDS;product=IS1 repressor protein InsA;protein_id=YP_002403400.1;transl_table=11
NC_011748.1	RefSeq	gene	2426604	2427107	.	+	.	ID=gene2423;Name=insB;Dbxref=GeneID:7146577;gbkey=Gene;gene=insB;locus_tag=EC55989_2372
NC_011748.1	RefSeq	CDS	2426604	2427107	.	+	0	ID=cds2255;Name=YP_002403401.1;Parent=gene2423;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 9689094%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002403401.1,GeneID:7146577;gbkey=CDS;product=IS1 transposase InsAB%27;protein_id=YP_002403401.1;transl_table=11
NC_011748.1	RefSeq	gene	2427226	2427696	.	-	.	ID=gene2424;Name=yehS;Dbxref=GeneID:7146589;gbkey=Gene;gene=yehS;locus_tag=EC55989_2373
NC_011748.1	RefSeq	CDS	2427226	2427696	.	-	0	ID=cds2256;Name=YP_002403402.1;Parent=gene2424;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403402.1,GeneID:7146589;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403402.1;transl_table=11
NC_011748.1	RefSeq	gene	2427743	2428462	.	-	.	ID=gene2425;Name=yehT;Dbxref=GeneID:7148647;gbkey=Gene;gene=yehT;locus_tag=EC55989_2374
NC_011748.1	RefSeq	CDS	2427743	2428462	.	-	0	ID=cds2257;Name=YP_002403403.1;Parent=gene2425;Note=unknown function%3B when overproduced it confers drug-resistance;Dbxref=Genbank:YP_002403403.1,GeneID:7148647;gbkey=CDS;product=two-component response-regulatory protein YehT;protein_id=YP_002403403.1;transl_table=11
NC_011748.1	RefSeq	gene	2428459	2430144	.	-	.	ID=gene2426;Name=yehU;Dbxref=GeneID:7148648;gbkey=Gene;gene=yehU;locus_tag=EC55989_2375
NC_011748.1	RefSeq	CDS	2428459	2430144	.	-	0	ID=cds2258;Name=YP_002403404.1;Parent=gene2426;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 15522865%2C 15322361%3B Product type rc : receptor;Dbxref=Genbank:YP_002403404.1,GeneID:7148648;gbkey=CDS;product=sensory kinase in two-component system with YehT;protein_id=YP_002403404.1;transl_table=11
NC_011748.1	RefSeq	gene	2430366	2431097	.	+	.	ID=gene2427;Name=mlrA;Dbxref=GeneID:7148649;gbkey=Gene;gene=mlrA;locus_tag=EC55989_2376
NC_011748.1	RefSeq	CDS	2430366	2431097	.	+	0	ID=cds2259;Name=YP_002403405.1;Parent=gene2427;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 11489123%3B Product type r : regulator;Dbxref=Genbank:YP_002403405.1,GeneID:7148649;gbkey=CDS;product=DNA-binding transcriptional regulator;protein_id=YP_002403405.1;transl_table=11
NC_011748.1	RefSeq	gene	2431157	2431264	.	+	.	ID=gene2428;Name=yohO;Dbxref=GeneID:7146862;gbkey=Gene;gene=yohO;locus_tag=EC55989_2377
NC_011748.1	RefSeq	CDS	2431157	2431264	.	+	0	ID=cds2260;Name=YP_002403406.1;Parent=gene2428;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403406.1,GeneID:7146862;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403406.1;transl_table=11
NC_011748.1	RefSeq	gene	2431245	2431976	.	-	.	ID=gene2429;Name=yehW;Dbxref=GeneID:7149359;gbkey=Gene;gene=yehW;locus_tag=EC55989_2378
NC_011748.1	RefSeq	CDS	2431245	2431976	.	-	0	ID=cds2261;Name=YP_002403407.1;Parent=gene2429;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002403407.1,GeneID:7149359;gbkey=CDS;product=transporter subunit: permease component of ABC superfamily transporter;protein_id=YP_002403407.1;transl_table=11
NC_011748.1	RefSeq	gene	2431981	2432907	.	-	.	ID=gene2430;Name=yehX;Dbxref=GeneID:7148650;gbkey=Gene;gene=yehX;locus_tag=EC55989_2379
NC_011748.1	RefSeq	CDS	2431981	2432907	.	-	0	ID=cds2262;Name=YP_002403408.1;Parent=gene2430;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002403408.1,GeneID:7148650;gbkey=CDS;product=transporter subunit: ATP-binding component of ABC superfamily transporter;protein_id=YP_002403408.1;transl_table=11
NC_011748.1	RefSeq	gene	2432900	2434057	.	-	.	ID=gene2431;Name=yehY;Dbxref=GeneID:7148651;gbkey=Gene;gene=yehY;locus_tag=EC55989_2380
NC_011748.1	RefSeq	CDS	2432900	2434057	.	-	0	ID=cds2263;Name=YP_002403409.1;Parent=gene2431;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002403409.1,GeneID:7148651;gbkey=CDS;product=transporter subunit: permease component of ABC superfamily;protein_id=YP_002403409.1;transl_table=11
NC_011748.1	RefSeq	gene	2434064	2434981	.	-	.	ID=gene2432;Name=yehZ;Dbxref=GeneID:7148652;gbkey=Gene;gene=yehZ;locus_tag=EC55989_2381
NC_011748.1	RefSeq	CDS	2434064	2434981	.	-	0	ID=cds2264;Name=YP_002403410.1;Parent=gene2432;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 15251200%3B Product type pt :  transporter;Dbxref=Genbank:YP_002403410.1,GeneID:7148652;gbkey=CDS;product=transporter subunit: periplasmic-binding component of ABC superfamily;protein_id=YP_002403410.1;transl_table=11
NC_011748.1	RefSeq	gene	2435192	2437489	.	-	.	ID=gene2433;Name=bglX;Dbxref=GeneID:7148653;gbkey=Gene;gene=bglX;locus_tag=EC55989_2382
NC_011748.1	RefSeq	CDS	2435192	2437489	.	-	0	ID=cds2265;Name=YP_002403411.1;Parent=gene2433;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 96303506%3B Product type e : enzyme;Dbxref=Genbank:YP_002403411.1,GeneID:7148653;gbkey=CDS;product=beta-D-glucoside glucohydrolase%2C periplasmic;protein_id=YP_002403411.1;transl_table=11
NC_011748.1	RefSeq	gene	2437685	2439400	.	+	.	ID=gene2434;Name=dld;Dbxref=GeneID:7145623;gbkey=Gene;gene=dld;locus_tag=EC55989_2383
NC_011748.1	RefSeq	CDS	2437685	2439400	.	+	0	ID=cds2266;Name=YP_002403412.1;Parent=gene2434;Note=component of the membrane-bound D-lactate oxidase%2C FAD-binding%2C NADH independent;Dbxref=Genbank:YP_002403412.1,GeneID:7145623;gbkey=CDS;product=D-lactate dehydrogenase;protein_id=YP_002403412.1;transl_table=11
NC_011748.1	RefSeq	gene	2439438	2440370	.	-	.	ID=gene2435;Name=pbpG;Dbxref=GeneID:7145927;gbkey=Gene;gene=pbpG;locus_tag=EC55989_2384
NC_011748.1	RefSeq	CDS	2439438	2440370	.	-	0	ID=cds2267;Name=YP_002403413.1;Parent=gene2435;Note=specifically hydrolyze the DD-diaminopimelate-alanine bonds in high-molecular-mass murein sacculi%3B Penicillin-binding protein 7;Dbxref=Genbank:YP_002403413.1,GeneID:7145927;gbkey=CDS;product=D-alanyl-D-alanine endopeptidase;protein_id=YP_002403413.1;transl_table=11
NC_011748.1	RefSeq	gene	2440544	2441131	.	-	.	ID=gene2436;Name=yohC;Dbxref=GeneID:7147119;gbkey=Gene;gene=yohC;locus_tag=EC55989_2385
NC_011748.1	RefSeq	CDS	2440544	2441131	.	-	0	ID=cds2268;Name=YP_002403414.1;Parent=gene2436;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002403414.1,GeneID:7147119;gbkey=CDS;product=inner membrane protein;protein_id=YP_002403414.1;transl_table=11
NC_011748.1	RefSeq	gene	2441301	2441879	.	+	.	ID=gene2437;Name=yohD;Dbxref=GeneID:7149351;gbkey=Gene;gene=yohD;locus_tag=EC55989_2386
NC_011748.1	RefSeq	CDS	2441301	2441879	.	+	0	ID=cds2269;Name=YP_002403415.1;Parent=gene2437;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002403415.1,GeneID:7149351;gbkey=CDS;product=inner membrane protein;protein_id=YP_002403415.1;transl_table=11
NC_011748.1	RefSeq	gene	2442009	2442770	.	-	.	ID=gene2438;Name=yohF;Dbxref=GeneID:7149352;gbkey=Gene;gene=yohF;locus_tag=EC55989_2388
NC_011748.1	RefSeq	CDS	2442009	2442770	.	-	0	ID=cds2270;Name=YP_002403416.1;Parent=gene2438;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002403416.1,GeneID:7149352;gbkey=CDS;product=acetoin dehydrogenase;protein_id=YP_002403416.1;transl_table=11
NC_011748.1	RefSeq	gene	2442823	2443911	.	-	.	ID=gene2439;Name=yohG;Dbxref=GeneID:7149353;gbkey=Gene;gene=yohG;locus_tag=EC55989_2389
NC_011748.1	RefSeq	CDS	2442823	2443911	.	-	0	ID=cds2271;Name=YP_002403417.1;Parent=gene2439;Note=may be involved in resistance to puromycin%2C acriflavine and tetraphenylarsonium chloride;Dbxref=Genbank:YP_002403417.1,GeneID:7149353;gbkey=CDS;product=multidrug resistance outer membrane protein MdtQ;protein_id=YP_002403417.1;transl_table=11
NC_011748.1	RefSeq	gene	2444939	2445886	.	-	.	ID=gene2440;Name=dusC;Dbxref=GeneID:7149354;gbkey=Gene;gene=dusC;locus_tag=EC55989_2390
NC_011748.1	RefSeq	CDS	2444939	2445886	.	-	0	ID=cds2272;Name=YP_002403418.1;Parent=gene2440;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 22095566%3B Product type e : enzyme;Dbxref=Genbank:YP_002403418.1,GeneID:7149354;gbkey=CDS;product=tRNA-dihydrouridine synthase C;protein_id=YP_002403418.1;transl_table=11
NC_011748.1	RefSeq	STS	2445843	2446048	.	+	.	ID=id191;Dbxref=UniSTS:11994;gbkey=STS
NC_011748.1	RefSeq	gene	2446125	2446523	.	+	.	ID=gene2441;Name=yohJ;Dbxref=GeneID:7145961;gbkey=Gene;gene=yohJ;locus_tag=EC55989_2391
NC_011748.1	RefSeq	CDS	2446125	2446523	.	+	0	ID=cds2273;Name=YP_002403419.1;Parent=gene2441;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002403419.1,GeneID:7145961;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403419.1;transl_table=11
NC_011748.1	RefSeq	gene	2446520	2447215	.	+	.	ID=gene2442;Name=yohK;Dbxref=GeneID:7149355;gbkey=Gene;gene=yohK;locus_tag=EC55989_2392
NC_011748.1	RefSeq	CDS	2446520	2447215	.	+	0	ID=cds2274;Name=YP_002403420.1;Parent=gene2442;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002403420.1,GeneID:7149355;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403420.1;transl_table=11
NC_011748.1	RefSeq	gene	2447345	2448229	.	+	.	ID=gene2443;Name=cdd;Dbxref=GeneID:7149356;gbkey=Gene;gene=cdd;locus_tag=EC55989_2393
NC_011748.1	RefSeq	CDS	2447345	2448229	.	+	0	ID=cds2275;Name=YP_002403421.1;Parent=gene2443;Note=Reclaims exogenous and endogenous cytidine and 2%27-deoxycytidine molecules for UMP synthesis;Dbxref=Genbank:YP_002403421.1,GeneID:7149356;gbkey=CDS;product=cytidine deaminase;protein_id=YP_002403421.1;transl_table=11
NC_011748.1	RefSeq	gene	2448379	2449098	.	+	.	ID=gene2444;Name=sanA;Dbxref=GeneID:7145683;gbkey=Gene;gene=sanA;locus_tag=EC55989_2394
NC_011748.1	RefSeq	CDS	2448379	2449098	.	+	0	ID=cds2276;Name=YP_002403422.1;Parent=gene2444;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 96125233%2C 1567863%2C 8550448;Dbxref=Genbank:YP_002403422.1,GeneID:7145683;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403422.1;transl_table=11
NC_011748.1	RefSeq	gene	2449101	2449340	.	+	.	ID=gene2445;Name=yeiS;Dbxref=GeneID:7147600;gbkey=Gene;gene=yeiS;locus_tag=EC55989_2395
NC_011748.1	RefSeq	CDS	2449101	2449340	.	+	0	ID=cds2277;Name=YP_002403423.1;Parent=gene2445;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002403423.1,GeneID:7147600;gbkey=CDS;product=inner membrane protein;protein_id=YP_002403423.1;transl_table=11
NC_011748.1	RefSeq	gene	2449659	2450897	.	+	.	ID=gene2446;Name=yeiT;Dbxref=GeneID:7148666;gbkey=Gene;gene=yeiT;locus_tag=EC55989_2396
NC_011748.1	RefSeq	CDS	2449659	2450897	.	+	0	ID=cds2278;Name=YP_002403424.1;Parent=gene2446;Note=function undetermined%3B similar to glutamate synthase beta subunit and related oxidoreductases which transfer electrons from NADPH to an acceptor protein or protein domain;Dbxref=Genbank:YP_002403424.1,GeneID:7148666;gbkey=CDS;product=oxidoreductase;protein_id=YP_002403424.1;transl_table=11
NC_011748.1	RefSeq	gene	2450920	2452125	.	+	.	ID=gene2447;Name=yeiA;Dbxref=GeneID:7148667;gbkey=Gene;gene=yeiA;locus_tag=EC55989_2397
NC_011748.1	RefSeq	CDS	2450920	2452125	.	+	0	ID=cds2279;Name=YP_002403425.1;Parent=gene2447;Note=catalyzes the first step in pyrimidine degradation: the NADPH-dependent reduction of uracil and thymine to the corresponding 5%2C6-dihydropyrimidines;Dbxref=Genbank:YP_002403425.1,GeneID:7148667;gbkey=CDS;product=dihydropyrimidine dehydrogenase;protein_id=YP_002403425.1;transl_table=11
NC_011748.1	RefSeq	gene	2452196	2453206	.	-	.	ID=gene2448;Name=mglC;Dbxref=GeneID:7148654;gbkey=Gene;gene=mglC;locus_tag=EC55989_2398
NC_011748.1	RefSeq	CDS	2452196	2453206	.	-	0	ID=cds2280;Name=YP_002403426.1;Parent=gene2448;Note=ABC transporter%3B functions in galactose transport%3B part of MglA2C2B transporter complex;Dbxref=Genbank:YP_002403426.1,GeneID:7148654;gbkey=CDS;product=beta-methylgalactoside transporter inner membrane protein;protein_id=YP_002403426.1;transl_table=11
NC_011748.1	RefSeq	gene	2453222	2454742	.	-	.	ID=gene2449;Name=mglA;Dbxref=GeneID:7146841;gbkey=Gene;gene=mglA;locus_tag=EC55989_2399
NC_011748.1	RefSeq	CDS	2453222	2454742	.	-	0	ID=cds2281;Name=YP_002403427.1;Parent=gene2449;Note=with MglBC transports galactose or methyl galactoside into the cell%3B contains 2 ATP binding domains;Dbxref=Genbank:YP_002403427.1,GeneID:7146841;gbkey=CDS;product=galactose%2Fmethyl galaxtoside transporter ATP-binding protein;protein_id=YP_002403427.1;transl_table=11
NC_011748.1	RefSeq	gene	2454803	2455801	.	-	.	ID=gene2450;Name=mglB;Dbxref=GeneID:7146839;gbkey=Gene;gene=mglB;locus_tag=EC55989_2400
NC_011748.1	RefSeq	CDS	2454803	2455801	.	-	0	ID=cds2282;Name=YP_002403428.1;Parent=gene2450;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 87286407%2C 92049246%2C 1719366%2C 3057628%2C 3302609%2C 3600760%2C 6340108%2C 6885805%2C 7012152%2C 9298646%3B Product type t : transporter;Dbxref=Genbank:YP_002403428.1,GeneID:7146839;gbkey=CDS;product=methyl-galactoside transporter subunit %3B periplasmic-binding component of ABC superfamily;protein_id=YP_002403428.1;transl_table=11
NC_011748.1	RefSeq	gene	2456081	2457121	.	-	.	ID=gene2451;Name=galS;Dbxref=GeneID:7146840;gbkey=Gene;gene=galS;locus_tag=EC55989_2401
NC_011748.1	RefSeq	CDS	2456081	2457121	.	-	0	ID=cds2283;Name=YP_002403429.1;Parent=gene2451;Note=negative regulator of the mglBAC operon for galactose utilization;Dbxref=Genbank:YP_002403429.1,GeneID:7146840;gbkey=CDS;product=DNA-binding transcriptional regulator GalS;protein_id=YP_002403429.1;transl_table=11
NC_011748.1	RefSeq	gene	2457111	2457314	.	+	.	ID=gene2452;Name=EC55989_2402;Dbxref=GeneID:7146253;gbkey=Gene;locus_tag=EC55989_2402
NC_011748.1	RefSeq	CDS	2457111	2457314	.	+	0	ID=cds2284;Name=YP_002403430.1;Parent=gene2452;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403430.1,GeneID:7146253;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403430.1;transl_table=11
NC_011748.1	RefSeq	gene	2457263	2458420	.	-	.	ID=gene2453;Name=yeiB;Dbxref=GeneID:7144766;gbkey=Gene;gene=yeiB;locus_tag=EC55989_2403
NC_011748.1	RefSeq	CDS	2457263	2458420	.	-	0	ID=cds2285;Name=YP_002403431.1;Parent=gene2453;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002403431.1,GeneID:7144766;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403431.1;transl_table=11
NC_011748.1	RefSeq	gene	2458437	2459105	.	-	.	ID=gene2454;Name=folE;Dbxref=GeneID:7148655;gbkey=Gene;gene=folE;locus_tag=EC55989_2404
NC_011748.1	RefSeq	CDS	2458437	2459105	.	-	0	ID=cds2286;Name=YP_002403432.1;Parent=gene2454;Note=involved in the first step of tetrahydrofolate biosynthesis%3B catalyzes the formation of formate and 2-amino-4-hydroxy-6-%28erythro-1%2C2%2C3-trihydroxypropyl%29dihydropteridine triphosphate from GTP and water%3B forms a homopolymer;Dbxref=Genbank:YP_002403432.1,GeneID:7148655;gbkey=CDS;product=GTP cyclohydrolase I;protein_id=YP_002403432.1;transl_table=11
NC_011748.1	RefSeq	gene	2459259	2459435	.	+	.	ID=gene2455;Name=EC55989_2405;Dbxref=GeneID:7146172;gbkey=Gene;locus_tag=EC55989_2405
NC_011748.1	RefSeq	CDS	2459259	2459435	.	+	0	ID=cds2287;Name=YP_002403433.1;Parent=gene2455;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403433.1,GeneID:7146172;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403433.1;transl_table=11
NC_011748.1	RefSeq	gene	2459363	2460199	.	+	.	ID=gene2456;Name=frmC;Dbxref=GeneID:7144767;gbkey=Gene;gene=frmC;locus_tag=EC55989_2406
NC_011748.1	RefSeq	CDS	2459363	2460199	.	+	0	ID=cds2288;Name=YP_002403434.1;Parent=gene2456;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 16567800%3B Product type e : enzyme;Dbxref=Genbank:YP_002403434.1,GeneID:7144767;gbkey=CDS;product=S-formylglutathione hydrolase;protein_id=YP_002403434.1;transl_table=11
NC_011748.1	RefSeq	gene	2460231	2462222	.	-	.	ID=gene2457;Name=cirA;Dbxref=GeneID:7146191;gbkey=Gene;gene=cirA;locus_tag=EC55989_2407
NC_011748.1	RefSeq	CDS	2460231	2462222	.	-	0	ID=cds2289;Name=YP_002403435.1;Parent=gene2457;Note=Cir%3B FeuA%3B CirA%3B receptor protein for siderophores %28colicin IA%2C IB and V%29 and microcins %28E492%2C H47%2C and M%29%3B TonB-dependent%3B able to transport monomers%2C dimer%2C and linear trimers of 2%2C3-dihydorxybenzoylserine%3B outer membrane protein;Dbxref=Genbank:YP_002403435.1,GeneID:7146191;gbkey=CDS;product=colicin I receptor;protein_id=YP_002403435.1;transl_table=11
NC_011748.1	RefSeq	gene	2462215	2462418	.	-	.	ID=gene2458;Name=EC55989_2408;Dbxref=GeneID:7145708;gbkey=Gene;locus_tag=EC55989_2408
NC_011748.1	RefSeq	CDS	2462215	2462418	.	-	0	ID=cds2290;Name=YP_002403436.1;Parent=gene2458;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403436.1,GeneID:7145708;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403436.1;transl_table=11
NC_011748.1	RefSeq	gene	2462515	2463984	.	-	.	ID=gene2459;Name=lysP;Dbxref=GeneID:7144768;gbkey=Gene;gene=lysP;locus_tag=EC55989_2409
NC_011748.1	RefSeq	CDS	2462515	2463984	.	-	0	ID=cds2291;Name=YP_002403437.1;Parent=gene2459;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 92250419%2C 94252996%2C 1315732%2C 7551055%3B Product type t : transporter;Dbxref=Genbank:YP_002403437.1,GeneID:7144768;gbkey=CDS;product=lysine transporter;protein_id=YP_002403437.1;transl_table=11
NC_011748.1	RefSeq	gene	2464189	2465070	.	-	.	ID=gene2460;Name=yeiE;Dbxref=GeneID:7146757;gbkey=Gene;gene=yeiE;locus_tag=EC55989_2410
NC_011748.1	RefSeq	CDS	2464189	2465070	.	-	0	ID=cds2292;Name=YP_002403438.1;Parent=gene2460;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 12400704%2C 1315732%3B Product type pr :  regulator;Dbxref=Genbank:YP_002403438.1,GeneID:7146757;gbkey=CDS;product=DNA-binding transcriptional regulator;protein_id=YP_002403438.1;transl_table=11
NC_011748.1	RefSeq	gene	2465169	2466218	.	+	.	ID=gene2461;Name=yeiH;Dbxref=GeneID:7148657;gbkey=Gene;gene=yeiH;locus_tag=EC55989_2411
NC_011748.1	RefSeq	CDS	2465169	2466218	.	+	0	ID=cds2293;Name=YP_002403439.1;Parent=gene2461;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002403439.1,GeneID:7148657;gbkey=CDS;product=inner membrane protein;protein_id=YP_002403439.1;transl_table=11
NC_011748.1	RefSeq	gene	2466292	2467149	.	+	.	ID=gene2462;Name=nfo;Dbxref=GeneID:7148658;gbkey=Gene;gene=nfo;locus_tag=EC55989_2412
NC_011748.1	RefSeq	CDS	2466292	2467149	.	+	0	ID=cds2294;Name=YP_002403440.1;Parent=gene2462;Note=Assists in DNA repair by cleaving phosphodiester bonds at apurinic or apyrimidinic sties to produce new 5%27 ends that are base-free deoxyribose 5-phosphate residues;Dbxref=Genbank:YP_002403440.1,GeneID:7148658;gbkey=CDS;product=endonuclease IV;protein_id=YP_002403440.1;transl_table=11
NC_011748.1	RefSeq	gene	2467153	2468241	.	+	.	ID=gene2463;Name=yeiI;Dbxref=GeneID:7146987;gbkey=Gene;gene=yeiI;locus_tag=EC55989_2413
NC_011748.1	RefSeq	CDS	2467153	2468241	.	+	0	ID=cds2295;Name=YP_002403441.1;Parent=gene2463;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002403441.1,GeneID:7146987;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403441.1;transl_table=11
NC_011748.1	RefSeq	gene	2468297	2469547	.	-	.	ID=gene2464;Name=yeiJ;Dbxref=GeneID:7148659;gbkey=Gene;gene=yeiJ;locus_tag=EC55989_2414
NC_011748.1	RefSeq	CDS	2468297	2469547	.	-	0	ID=cds2296;Name=YP_002403442.1;Parent=gene2464;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002403442.1,GeneID:7148659;gbkey=CDS;product=sodium%2Fproton nucleoside transporter;protein_id=YP_002403442.1;transl_table=11
NC_011748.1	RefSeq	gene	2469647	2470588	.	-	.	ID=gene2465;Name=rihB;Dbxref=GeneID:7148660;gbkey=Gene;gene=rihB;locus_tag=EC55989_2415
NC_011748.1	RefSeq	CDS	2469647	2470588	.	-	0	ID=cds2297;Name=YP_002403443.1;Parent=gene2465;Note=Hydrolyzes cytidine or uridine to ribose and cytosine or uracil%2C respectively;Dbxref=Genbank:YP_002403443.1,GeneID:7148660;gbkey=CDS;product=ribonucleoside hydrolase 2;protein_id=YP_002403443.1;transl_table=11
NC_011748.1	RefSeq	gene	2470757	2471416	.	+	.	ID=gene2466;Name=yeiL;Dbxref=GeneID:7147416;gbkey=Gene;gene=yeiL;locus_tag=EC55989_2416
NC_011748.1	RefSeq	CDS	2470757	2471416	.	+	0	ID=cds2298;Name=YP_002403444.1;Parent=gene2466;Note=activator of nucleoside metabolism;Dbxref=Genbank:YP_002403444.1,GeneID:7147416;gbkey=CDS;product=DNA-binding transcriptional activator YeiL;protein_id=YP_002403444.1;transl_table=11
NC_011748.1	RefSeq	gene	2471484	2472734	.	-	.	ID=gene2467;Name=yeiM;Dbxref=GeneID:7148661;gbkey=Gene;gene=yeiM;locus_tag=EC55989_2417
NC_011748.1	RefSeq	CDS	2471484	2472734	.	-	0	ID=cds2299;Name=YP_002403445.1;Parent=gene2467;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002403445.1,GeneID:7148661;gbkey=CDS;product=sodium%2Fproton nucleoside transporter;protein_id=YP_002403445.1;transl_table=11
NC_011748.1	RefSeq	gene	2472828	2473766	.	-	.	ID=gene2468;Name=yeiN;Dbxref=GeneID:7148662;gbkey=Gene;gene=yeiN;locus_tag=EC55989_2418
NC_011748.1	RefSeq	CDS	2472828	2473766	.	-	0	ID=cds2300;Name=YP_002403446.1;Parent=gene2468;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403446.1,GeneID:7148662;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403446.1;transl_table=11
NC_011748.1	RefSeq	gene	2473754	2474695	.	-	.	ID=gene2469;Name=yeiC;Dbxref=GeneID:7148663;gbkey=Gene;gene=yeiC;locus_tag=EC55989_2419
NC_011748.1	RefSeq	CDS	2473754	2474695	.	-	0	ID=cds2301;Name=YP_002403447.1;Parent=gene2469;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002403447.1,GeneID:7148663;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403447.1;transl_table=11
NC_011748.1	RefSeq	gene	2475119	2476810	.	-	.	ID=gene2470;Name=fruA;Dbxref=GeneID:7148656;gbkey=Gene;gene=fruA;locus_tag=EC55989_2420
NC_011748.1	RefSeq	CDS	2475119	2476810	.	-	0	ID=cds2302;Name=YP_002403448.1;Parent=gene2470;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;Dbxref=Genbank:YP_002403448.1,GeneID:7148656;gbkey=CDS;product=PTS system fructose-specific transporter subunit IIBC;protein_id=YP_002403448.1;transl_table=11
NC_011748.1	RefSeq	gene	2476827	2477765	.	-	.	ID=gene2471;Name=fruK;Dbxref=GeneID:7146195;gbkey=Gene;gene=fruK;locus_tag=EC55989_2421
NC_011748.1	RefSeq	CDS	2476827	2477765	.	-	0	ID=cds2303;Name=YP_002403449.1;Parent=gene2471;Note=converts fructose-1-phosphate and ATP to fructose-1%2C6-bisphosphate and ADP%3B highly specific for fructose-1-phopshate%3B similar to PfkB%3B forms homodimers;Dbxref=Genbank:YP_002403449.1,GeneID:7146195;gbkey=CDS;product=1-phosphofructokinase;protein_id=YP_002403449.1;transl_table=11
NC_011748.1	RefSeq	gene	2477765	2478895	.	-	.	ID=gene2472;Name=fruB;Dbxref=GeneID:7146197;gbkey=Gene;gene=fruB;locus_tag=EC55989_2422
NC_011748.1	RefSeq	CDS	2477765	2478895	.	-	0	ID=cds2304;Name=YP_002403450.1;Parent=gene2472;Note=phosphoenolpyruvate %28PEP%29-dependent%2C sugar transporting phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIA is phosphorylated by phospho-HP which then transfers the phosphoryl group to the IIB componentr;Dbxref=Genbank:YP_002403450.1,GeneID:7146197;gbkey=CDS;product=bifunctional PTS system fructose-specific transporter subunit IIA%2FHPr protein;protein_id=YP_002403450.1;transl_table=11
NC_011748.1	RefSeq	gene	2479263	2480444	.	+	.	ID=gene2473;Name=setB;Dbxref=GeneID:7146196;gbkey=Gene;gene=setB;locus_tag=EC55989_2423
NC_011748.1	RefSeq	CDS	2479263	2480444	.	+	0	ID=cds2305;Name=YP_002403451.1;Parent=gene2473;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 10438463%2C 10209755%3B Product type t : transporter;Dbxref=Genbank:YP_002403451.1,GeneID:7146196;gbkey=CDS;product=lactose%2Fglucose efflux system;protein_id=YP_002403451.1;transl_table=11
NC_011748.1	RefSeq	gene	2480441	2480827	.	-	.	ID=gene2474;Name=EC55989_2424;Dbxref=GeneID:7147637;gbkey=Gene;locus_tag=EC55989_2424
NC_011748.1	RefSeq	CDS	2480441	2480827	.	-	0	ID=cds2306;Name=YP_002403452.1;Parent=gene2474;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403452.1,GeneID:7147637;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403452.1;transl_table=11
NC_011748.1	RefSeq	gene	2480595	2481422	.	+	.	ID=gene2475;Name=EC55989_2425;Dbxref=GeneID:7144769;gbkey=Gene;locus_tag=EC55989_2425
NC_011748.1	RefSeq	CDS	2480595	2481422	.	+	0	ID=cds2307;Name=YP_002403453.1;Parent=gene2475;Note=Stimulates the peptidyltransferase activity of the 70S ribosome and enhances dipeptide synthesis with N-formylmethionyl-tRNA and puromycin in vitro%2C suggesting its involvement in the formation of the first peptide bond of a protein;Dbxref=Genbank:YP_002403453.1,GeneID:7144769;gbkey=CDS;product=elongation factor P;protein_id=YP_002403453.1;transl_table=11
NC_011748.1	RefSeq	gene	2481645	2483111	.	+	.	ID=gene2476;Name=yeiQ;Dbxref=GeneID:7144770;gbkey=Gene;gene=yeiQ;locus_tag=EC55989_2426
NC_011748.1	RefSeq	CDS	2481645	2483111	.	+	0	ID=cds2308;Name=YP_002403454.1;Parent=gene2476;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002403454.1,GeneID:7144770;gbkey=CDS;product=sugar dehydrogenase%2C NAD-dependent;protein_id=YP_002403454.1;transl_table=11
NC_011748.1	RefSeq	gene	2483229	2484215	.	+	.	ID=gene2477;Name=yeiR;Dbxref=GeneID:7148664;gbkey=Gene;gene=yeiR;locus_tag=EC55989_2427
NC_011748.1	RefSeq	CDS	2483229	2484215	.	+	0	ID=cds2309;Name=YP_002403455.1;Parent=gene2477;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002403455.1,GeneID:7148664;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403455.1;transl_table=11
NC_011748.1	RefSeq	gene	2484254	2484967	.	+	.	ID=gene2478;Name=yeiU;Dbxref=GeneID:7148665;gbkey=Gene;gene=yeiU;locus_tag=EC55989_2428
NC_011748.1	RefSeq	CDS	2484254	2484967	.	+	0	ID=cds2310;Name=YP_002403456.1;Parent=gene2478;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 15778224%3B Product type e : enzyme;Dbxref=Genbank:YP_002403456.1,GeneID:7148665;gbkey=CDS;product=undecaprenyl pyrophosphate phosphatase;protein_id=YP_002403456.1;transl_table=11
NC_011748.1	RefSeq	gene	2485379	2485945	.	+	.	ID=gene2479;Name=spr;Dbxref=GeneID:7148668;gbkey=Gene;gene=spr;locus_tag=EC55989_2429
NC_011748.1	RefSeq	CDS	2485379	2485945	.	+	0	ID=cds2311;Name=YP_002403457.1;Parent=gene2479;Note=by similarity%2C Spr seems to have peptidase activity%3B involved in thermoresistance;Dbxref=Genbank:YP_002403457.1,GeneID:7148668;gbkey=CDS;product=outer membrane lipoprotein;protein_id=YP_002403457.1;transl_table=11
NC_011748.1	RefSeq	gene	2486126	2487682	.	+	.	ID=gene2480;Name=rtn;Dbxref=GeneID:7147695;gbkey=Gene;gene=rtn;locus_tag=EC55989_2430
NC_011748.1	RefSeq	CDS	2486126	2487682	.	+	0	ID=cds2312;Name=YP_002403458.1;Parent=gene2480;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403458.1,GeneID:7147695;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403458.1;transl_table=11
NC_011748.1	RefSeq	gene	2487764	2489578	.	+	.	ID=gene2481;Name=yejA;Dbxref=GeneID:7147555;gbkey=Gene;gene=yejA;locus_tag=EC55989_2431
NC_011748.1	RefSeq	CDS	2487764	2489578	.	+	0	ID=cds2313;Name=YP_002403459.1;Parent=gene2481;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002403459.1,GeneID:7147555;gbkey=CDS;product=oligopeptide transporter subunit %3B periplasmic-binding component of ABC superfamily transporter;protein_id=YP_002403459.1;transl_table=11
NC_011748.1	RefSeq	gene	2489579	2490673	.	+	.	ID=gene2482;Name=yejB;Dbxref=GeneID:7148669;gbkey=Gene;gene=yejB;locus_tag=EC55989_2432
NC_011748.1	RefSeq	CDS	2489579	2490673	.	+	0	ID=cds2314;Name=YP_002403460.1;Parent=gene2482;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002403460.1,GeneID:7148669;gbkey=CDS;product=oligopeptide transporter subunit%3B permease component of ABC superfamily;protein_id=YP_002403460.1;transl_table=11
NC_011748.1	RefSeq	gene	2490673	2491698	.	+	.	ID=gene2483;Name=yejE;Dbxref=GeneID:7148670;gbkey=Gene;gene=yejE;locus_tag=EC55989_2433
NC_011748.1	RefSeq	CDS	2490673	2491698	.	+	0	ID=cds2315;Name=YP_002403461.1;Parent=gene2483;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002403461.1,GeneID:7148670;gbkey=CDS;product=oligopeptide transporter subunit %3B permease component of ABC superfamily transporter;protein_id=YP_002403461.1;transl_table=11
NC_011748.1	RefSeq	gene	2491700	2493289	.	+	.	ID=gene2484;Name=yejF;Dbxref=GeneID:7148671;gbkey=Gene;gene=yejF;locus_tag=EC55989_2434
NC_011748.1	RefSeq	CDS	2491700	2493289	.	+	0	ID=cds2316;Name=YP_002403462.1;Parent=gene2484;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002403462.1,GeneID:7148671;gbkey=CDS;product=fused oligopeptide transporter subunits of ABC superfamily: ATP-binding components;protein_id=YP_002403462.1;transl_table=11
NC_011748.1	RefSeq	gene	2493293	2493637	.	-	.	ID=gene2485;Name=yejG;Dbxref=GeneID:7148672;gbkey=Gene;gene=yejG;locus_tag=EC55989_2435
NC_011748.1	RefSeq	CDS	2493293	2493637	.	-	0	ID=cds2317;Name=YP_002403463.1;Parent=gene2485;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403463.1,GeneID:7148672;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403463.1;transl_table=11
NC_011748.1	RefSeq	gene	2493970	2495160	.	-	.	ID=gene2486;Name=bcr;Dbxref=GeneID:7148673;gbkey=Gene;gene=bcr;locus_tag=EC55989_2436
NC_011748.1	RefSeq	CDS	2493970	2495160	.	-	0	ID=cds2318;Name=YP_002403464.1;Parent=gene2486;Note=Involved in sulfonamide %28sulfathiazole%29 and bicyclomycin resistance;Dbxref=Genbank:YP_002403464.1,GeneID:7148673;gbkey=CDS;product=bicyclomycin%2Fmultidrug efflux system protein;protein_id=YP_002403464.1;transl_table=11
NC_011748.1	RefSeq	gene	2495188	2495883	.	-	.	ID=gene2487;Name=rsuA;Dbxref=GeneID:7145601;gbkey=Gene;gene=rsuA;locus_tag=EC55989_2437
NC_011748.1	RefSeq	CDS	2495188	2495883	.	-	0	ID=cds2319;Name=YP_002403465.1;Parent=gene2487;Note=catalyzes the synthesis pseudouridine from uracil-516 in 16S ribosomal RNA;Dbxref=Genbank:YP_002403465.1,GeneID:7145601;gbkey=CDS;product=16S rRNA pseudouridylate synthase A;protein_id=YP_002403465.1;transl_table=11
NC_011748.1	RefSeq	gene	2496032	2497792	.	+	.	ID=gene2488;Name=yejH;Dbxref=GeneID:7147545;gbkey=Gene;gene=yejH;locus_tag=EC55989_2438
NC_011748.1	RefSeq	CDS	2496032	2497792	.	+	0	ID=cds2320;Name=YP_002403466.1;Parent=gene2488;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002403466.1,GeneID:7147545;gbkey=CDS;product=nucleic acid ATP-dependent helicase;protein_id=YP_002403466.1;transl_table=11
NC_011748.1	RefSeq	gene	2497917	2498201	.	+	.	ID=gene2489;Name=rplY;Dbxref=GeneID:7148674;gbkey=Gene;gene=rplY;locus_tag=EC55989_2439
NC_011748.1	RefSeq	CDS	2497917	2498201	.	+	0	ID=cds2321;Name=YP_002403467.1;Parent=gene2489;Note=the Ctc family of proteins consists of two types%2C one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response;Dbxref=Genbank:YP_002403467.1,GeneID:7148674;gbkey=CDS;product=50S ribosomal protein L25;protein_id=YP_002403467.1;transl_table=11
NC_011748.1	RefSeq	gene	2498340	2499347	.	-	.	ID=gene2490;Name=yejK;Dbxref=GeneID:7147485;gbkey=Gene;gene=yejK;locus_tag=EC55989_2440
NC_011748.1	RefSeq	CDS	2498340	2499347	.	-	0	ID=cds2322;Name=YP_002403468.1;Parent=gene2490;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 99296598%2C 10368163%3B Product type f : factor;Dbxref=Genbank:YP_002403468.1,GeneID:7147485;gbkey=CDS;product=nucleoid-associated protein NdpA;protein_id=YP_002403468.1;transl_table=11
NC_011748.1	RefSeq	gene	2499529	2499756	.	+	.	ID=gene2491;Name=yejL;Dbxref=GeneID:7148675;gbkey=Gene;gene=yejL;locus_tag=EC55989_2441
NC_011748.1	RefSeq	CDS	2499529	2499756	.	+	0	ID=cds2323;Name=YP_002403469.1;Parent=gene2491;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403469.1,GeneID:7148675;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403469.1;transl_table=11
NC_011748.1	RefSeq	gene	2499776	2501536	.	+	.	ID=gene2492;Name=yejM;Dbxref=GeneID:7148676;gbkey=Gene;gene=yejM;locus_tag=EC55989_2442
NC_011748.1	RefSeq	CDS	2499776	2501536	.	+	0	ID=cds2324;Name=YP_002403470.1;Parent=gene2492;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002403470.1,GeneID:7148676;gbkey=CDS;product=hydrolase%2C inner membrane-associated;protein_id=YP_002403470.1;transl_table=11
NC_011748.1	RefSeq	gene	2501611	2501687	.	+	.	ID=gene2493;Name=EC55989_tRNA25;Dbxref=GeneID:7148677;gbkey=Gene;locus_tag=EC55989_tRNA25
NC_011748.1	RefSeq	tRNA	2501611	2501687	.	+	.	ID=rna97;Dbxref=GeneID:7148677;gbkey=tRNA;product=tRNA-Pro
NC_011748.1	RefSeq	exon	2501611	2501687	.	+	.	ID=id192;Parent=rna97;Dbxref=GeneID:7148677;gbkey=tRNA;product=tRNA-Pro
NC_011748.1	RefSeq	gene	2501666	2501827	.	-	.	ID=gene2494;Name=EC55989_2443;Dbxref=GeneID:7145334;gbkey=Gene;locus_tag=EC55989_2443
NC_011748.1	RefSeq	CDS	2501666	2501827	.	-	0	ID=cds2325;Name=YP_002403471.1;Parent=gene2494;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403471.1,GeneID:7145334;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403471.1;transl_table=11
NC_011748.1	RefSeq	gene	2501791	2502003	.	-	.	ID=gene2495;Name=yejO;Dbxref=GeneID:7144771;gbkey=Gene;gene=yejO;locus_tag=EC55989_2444;pseudo=true
NC_011748.1	RefSeq	region	2501791	2502003	.	-	.	ID=id193;Note=fragment of  autotransporter outer membrane protein%3B type V secretion %28part 2%29%3BEvidence 7 : Gene remnant%3B Product type pt :  transporter;Dbxref=GeneID:7144771;gbkey=misc_feature
NC_011748.1	RefSeq	gene	2502016	2504331	.	-	.	ID=gene2496;Name=yejO;Dbxref=GeneID:7148678;gbkey=Gene;gene=yejO;locus_tag=EC55989_2445;pseudo=true
NC_011748.1	RefSeq	region	2502016	2504331	.	-	.	ID=id194;Note=fragment of  autotransporter outer membrane protein%3B type V secretion %28part 1%29%3BEvidence 7 : Gene remnant%3B Product type pt :  transporter;Dbxref=GeneID:7148678;gbkey=misc_feature
NC_011748.1	RefSeq	gene	2504702	2505349	.	+	.	ID=gene2497;Name=narP;Dbxref=GeneID:7148679;gbkey=Gene;gene=narP;locus_tag=EC55989_2446
NC_011748.1	RefSeq	CDS	2504702	2505349	.	+	0	ID=cds2326;Name=YP_002403472.1;Parent=gene2497;Note=nitrate%2Fnitrite response regulator NarP%3B NarP is phosphorylated by NarX and NarQ and can activate fdnG and nitrite or nitrate reductase systems%3B represses expression of other anaerobic genes;Dbxref=Genbank:YP_002403472.1,GeneID:7148679;gbkey=CDS;product=transcriptional regulator NarP;protein_id=YP_002403472.1;transl_table=11
NC_011748.1	RefSeq	gene	2505384	2506436	.	-	.	ID=gene2498;Name=ccmH;Dbxref=GeneID:7146973;gbkey=Gene;gene=ccmH;locus_tag=EC55989_2447
NC_011748.1	RefSeq	CDS	2505384	2506436	.	-	0	ID=cds2327;Name=YP_002403473.1;Parent=gene2498;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 10339610%2C 11756453%2C 12196152%2C 87260957%2C 91194558%2C 95362656%2C 9914305%2C 7635817%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002403473.1,GeneID:7146973;gbkey=CDS;product=heme lyase%2C CcmH subunit;protein_id=YP_002403473.1;transl_table=11
NC_011748.1	RefSeq	gene	2506433	2506990	.	-	.	ID=gene2499;Name=ccmG;Dbxref=GeneID:7145681;gbkey=Gene;gene=ccmG;locus_tag=EC55989_2448
NC_011748.1	RefSeq	CDS	2506433	2506990	.	-	0	ID=cds2328;Name=YP_002403474.1;Parent=gene2499;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 10339610%2C 12196152%2C 9716493%2C 9770295%2C 11256948%2C 11350062%2C 11843181%2C 7635817%2C 9537397%3B Product type e : enzyme;Dbxref=Genbank:YP_002403474.1,GeneID:7145681;gbkey=CDS;product=periplasmic thioredoxin of cytochrome c-type biogenesis;protein_id=YP_002403474.1;transl_table=11
NC_011748.1	RefSeq	gene	2506987	2508930	.	-	.	ID=gene2500;Name=ccmF;Dbxref=GeneID:7145680;gbkey=Gene;gene=ccmF;locus_tag=EC55989_2449
NC_011748.1	RefSeq	CDS	2506987	2508930	.	-	0	ID=cds2329;Name=YP_002403475.1;Parent=gene2500;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 10339610%2C 11756453%2C 12196152%2C 87260957%2C 8842153%2C 91194558%2C 95362656%2C 9716493%2C 7635817%3B Product type e : enzyme;Dbxref=Genbank:YP_002403475.1,GeneID:7145680;gbkey=CDS;product=heme lyase%2C CcmF subunit;protein_id=YP_002403475.1;transl_table=11
NC_011748.1	RefSeq	gene	2508927	2509406	.	-	.	ID=gene2501;Name=ccmE;Dbxref=GeneID:7145679;gbkey=Gene;gene=ccmE;locus_tag=EC55989_2450
NC_011748.1	RefSeq	CDS	2508927	2509406	.	-	0	ID=cds2330;Name=YP_002403476.1;Parent=gene2501;Note=CycJ%3B periplasmic heme chaperone that binds heme transiently via a histidine residue and delivers it to newly synthesized and  c-type cytochromes%3B requires the ATP hydrolysis activity of the CcmA protein in order to transfer the heme to the apocytochrome%3B part of the cytochrome c maturation system%3B periplasmic protein anchored to the inner membrane;Dbxref=Genbank:YP_002403476.1,GeneID:7145679;gbkey=CDS;product=cytochrome c-type biogenesis protein CcmE;protein_id=YP_002403476.1;transl_table=11
NC_011748.1	RefSeq	gene	2509403	2509612	.	-	.	ID=gene2502;Name=ccmD;Dbxref=GeneID:7145678;gbkey=Gene;gene=ccmD;locus_tag=EC55989_2451
NC_011748.1	RefSeq	CDS	2509403	2509612	.	-	0	ID=cds2331;Name=YP_002403477.1;Parent=gene2502;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 10339610%2C 12196152%2C 95362656%2C 9716493%2C 7635817%3B Product type f : factor;Dbxref=Genbank:YP_002403477.1,GeneID:7145678;gbkey=CDS;product=cytochrome c biogenesis protein;protein_id=YP_002403477.1;transl_table=11
NC_011748.1	RefSeq	gene	2509609	2510346	.	-	.	ID=gene2503;Name=ccmC;Dbxref=GeneID:7145677;gbkey=Gene;gene=ccmC;locus_tag=EC55989_2452
NC_011748.1	RefSeq	CDS	2509609	2510346	.	-	0	ID=cds2332;Name=YP_002403478.1;Parent=gene2503;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 10339610%2C 12196152%2C 14532274%2C 21413853%2C 95362656%2C 7635817%3B Product type t : transporter;Dbxref=Genbank:YP_002403478.1,GeneID:7145677;gbkey=CDS;product=heme exporter subunit %3B membrane component of ABC superfamily;protein_id=YP_002403478.1;transl_table=11
NC_011748.1	RefSeq	gene	2510388	2511050	.	-	.	ID=gene2504;Name=ccmB;Dbxref=GeneID:7145676;gbkey=Gene;gene=ccmB;locus_tag=EC55989_2453
NC_011748.1	RefSeq	CDS	2510388	2511050	.	-	0	ID=cds2333;Name=YP_002403479.1;Parent=gene2504;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 10339610%2C 12196152%2C 95362656%2C 9716493%2C 7635817%3B Product type t : transporter;Dbxref=Genbank:YP_002403479.1,GeneID:7145676;gbkey=CDS;product=heme exporter subunit %3B membrane component of ABC superfamily;protein_id=YP_002403479.1;transl_table=11
NC_011748.1	RefSeq	gene	2511047	2511670	.	-	.	ID=gene2505;Name=ccmA;Dbxref=GeneID:7145675;gbkey=Gene;gene=ccmA;locus_tag=EC55989_2454
NC_011748.1	RefSeq	CDS	2511047	2511670	.	-	0	ID=cds2334;Name=YP_002403480.1;Parent=gene2505;Note=ATP-binding protein%3B required for proper cytochrome c maturation;Dbxref=Genbank:YP_002403480.1,GeneID:7145675;gbkey=CDS;product=cytochrome c biogenesis protein CcmA;protein_id=YP_002403480.1;transl_table=11
NC_011748.1	RefSeq	gene	2511683	2512285	.	-	.	ID=gene2506;Name=napC;Dbxref=GeneID:7145674;gbkey=Gene;gene=napC;locus_tag=EC55989_2455
NC_011748.1	RefSeq	CDS	2511683	2512285	.	-	0	ID=cds2335;Name=YP_002403481.1;Parent=gene2506;Note=with NapABDFGH functions as a nitrate reductase%3B NapC functions as an electron shuttle between NapAB and NapGH or quinone;Dbxref=Genbank:YP_002403481.1,GeneID:7145674;gbkey=CDS;product=cytochrome c-type protein NapC;protein_id=YP_002403481.1;transl_table=11
NC_011748.1	RefSeq	gene	2512295	2512744	.	-	.	ID=gene2507;Name=napB;Dbxref=GeneID:7146962;gbkey=Gene;gene=napB;locus_tag=EC55989_2456
NC_011748.1	RefSeq	CDS	2512295	2512744	.	-	0	ID=cds2336;Name=YP_002403482.1;Parent=gene2507;Note=small subunit of periplasmic nitrate reductase%3B receives electrons from the membrane-bound NapC and passes them to NapA;Dbxref=Genbank:YP_002403482.1,GeneID:7146962;gbkey=CDS;product=citrate reductase cytochrome c-type subunit;protein_id=YP_002403482.1;transl_table=11
NC_011748.1	RefSeq	gene	2512741	2513604	.	-	.	ID=gene2508;Name=napH;Dbxref=GeneID:7146961;gbkey=Gene;gene=napH;locus_tag=EC55989_2457
NC_011748.1	RefSeq	CDS	2512741	2513604	.	-	0	ID=cds2337;Name=YP_002403483.1;Parent=gene2508;Note=part of NapHG quinol dehydrogenase%3B couples electron transfer from ubiquinone-ubiquinol couple via NapC%2FB to NapA;Dbxref=Genbank:YP_002403483.1,GeneID:7146961;gbkey=CDS;product=quinol dehydrogenase membrane component;protein_id=YP_002403483.1;transl_table=11
NC_011748.1	RefSeq	gene	2513591	2514286	.	-	.	ID=gene2509;Name=napG;Dbxref=GeneID:7146966;gbkey=Gene;gene=napG;locus_tag=EC55989_2459
NC_011748.1	RefSeq	CDS	2513591	2514286	.	-	0	ID=cds2338;Name=YP_002403484.1;Parent=gene2509;Note=part of NapHG quinol dehydrogenase%3B couples electron transfer from ubiquinone-ubiquinol couple via NapC%2FB to NapA%3B secreted by twin arginine translocation pathway;Dbxref=Genbank:YP_002403484.1,GeneID:7146966;gbkey=CDS;product=quinol dehydrogenase periplasmic component;protein_id=YP_002403484.1;transl_table=11
NC_011748.1	RefSeq	gene	2514293	2516779	.	-	.	ID=gene2510;Name=napA;Dbxref=GeneID:7146965;gbkey=Gene;gene=napA;locus_tag=EC55989_2460
NC_011748.1	RefSeq	CDS	2514293	2516779	.	-	0	ID=cds2339;Name=YP_002403485.1;Parent=gene2510;Note=periplasmic%3B catalytic subunit%3B with NapBC catalyzes the reduction of nitrate to nitrite%3B NapAB receives electrons from NapC;Dbxref=Genbank:YP_002403485.1,GeneID:7146965;gbkey=CDS;product=nitrate reductase catalytic subunit;protein_id=YP_002403485.1;transl_table=11
NC_011748.1	RefSeq	gene	2516776	2517039	.	-	.	ID=gene2511;Name=napD;Dbxref=GeneID:7146960;gbkey=Gene;gene=napD;locus_tag=EC55989_2461
NC_011748.1	RefSeq	CDS	2516776	2517039	.	-	0	ID=cds2340;Name=YP_002403486.1;Parent=gene2511;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 96228696%2C 99395037%3B Product type f : factor;Dbxref=Genbank:YP_002403486.1,GeneID:7146960;gbkey=CDS;product=assembly protein for periplasmic nitrate reductase;protein_id=YP_002403486.1;transl_table=11
NC_011748.1	RefSeq	gene	2517029	2517523	.	-	.	ID=gene2512;Name=napF;Dbxref=GeneID:7146963;gbkey=Gene;gene=napF;locus_tag=EC55989_2462
NC_011748.1	RefSeq	CDS	2517029	2517523	.	-	0	ID=cds2341;Name=YP_002403487.1;Parent=gene2512;Note=Predicted role in electron transfer to the periplasmic nitrate reductase protein NapA.;Dbxref=Genbank:YP_002403487.1,GeneID:7146963;gbkey=CDS;product=ferredoxin-type protein;protein_id=YP_002403487.1;transl_table=11
NC_011748.1	RefSeq	gene	2517623	2517796	.	+	.	ID=gene2513;Name=EC55989_2463;Dbxref=GeneID:7146964;gbkey=Gene;locus_tag=EC55989_2463
NC_011748.1	RefSeq	CDS	2517623	2517796	.	+	0	ID=cds2342;Name=YP_002403488.1;Parent=gene2513;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403488.1,GeneID:7146964;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403488.1;transl_table=11
NC_011748.1	RefSeq	gene	2517931	2518419	.	+	.	ID=gene2514;Name=eco;Dbxref=GeneID:7144772;gbkey=Gene;gene=eco;locus_tag=EC55989_2464
NC_011748.1	RefSeq	CDS	2517931	2518419	.	+	0	ID=cds2343;Name=YP_002403489.1;Parent=gene2514;Note=serine protease inhibitor%2C inhibits trypsin and other proteases;Dbxref=Genbank:YP_002403489.1,GeneID:7144772;gbkey=CDS;product=ecotin;protein_id=YP_002403489.1;transl_table=11
NC_011748.1	RefSeq	gene	2518568	2520214	.	-	.	ID=gene2515;Name=mqo;Dbxref=GeneID:7145973;gbkey=Gene;gene=mqo;locus_tag=EC55989_2465
NC_011748.1	RefSeq	CDS	2518568	2520214	.	-	0	ID=cds2344;Name=YP_002403490.1;Parent=gene2515;Note=malate dehydrogenase%3B catalyzes the oxidation of malate to oxaloacetate;Dbxref=Genbank:YP_002403490.1,GeneID:7145973;gbkey=CDS;product=malate:quinone oxidoreductase;protein_id=YP_002403490.1;transl_table=11
NC_011748.1	RefSeq	gene	2520432	2522075	.	-	.	ID=gene2516;Name=yojI;Dbxref=GeneID:7146894;gbkey=Gene;gene=yojI;locus_tag=EC55989_2466
NC_011748.1	RefSeq	CDS	2520432	2522075	.	-	0	ID=cds2345;Name=YP_002403491.1;Parent=gene2516;Note=efflux pump for the antibacterial peptide microcin J25;Dbxref=Genbank:YP_002403491.1,GeneID:7146894;gbkey=CDS;product=multidrug transporter membrane protein%2FATP-binding component;protein_id=YP_002403491.1;transl_table=11
NC_011748.1	RefSeq	gene	2522151	2522801	.	-	.	ID=gene2517;Name=alkB;Dbxref=GeneID:7149360;gbkey=Gene;gene=alkB;locus_tag=EC55989_2467
NC_011748.1	RefSeq	CDS	2522151	2522801	.	-	0	ID=cds2346;Name=YP_002403492.1;Parent=gene2517;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 12226668%2C 12517444%2C 12862460%2C 14527653%2C 87057220%2C 88151899%2C 92017669%2C 3536913%2C 3887409%2C 7928996%3B Product type e : enzyme;Dbxref=Genbank:YP_002403492.1,GeneID:7149360;gbkey=CDS;product=oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA lesions;protein_id=YP_002403492.1;transl_table=11
NC_011748.1	RefSeq	gene	2522801	2523865	.	-	.	ID=gene2518;Name=ada;Dbxref=GeneID:7145482;gbkey=Gene;gene=ada;locus_tag=EC55989_2468
NC_011748.1	RefSeq	CDS	2522801	2523865	.	-	0	ID=cds2347;Name=YP_002403493.1;Parent=gene2518;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 91073391%2C 93272965%2C 94252990%3B Product type r : regulator;Dbxref=Genbank:YP_002403493.1,GeneID:7145482;gbkey=CDS;product=fused DNA-binding transcriptional dual regulator %3B O6-methylguanine-DNA methyltransferase;protein_id=YP_002403493.1;transl_table=11
NC_011748.1	RefSeq	gene	2523939	2524994	.	-	.	ID=gene2519;Name=yojL;Dbxref=GeneID:7145452;gbkey=Gene;gene=yojL;locus_tag=EC55989_2469
NC_011748.1	RefSeq	CDS	2523939	2524994	.	-	0	ID=cds2348;Name=YP_002403494.1;Parent=gene2519;Note=catalyzes the conversion of aminoimidazole ribotide to the 4-amino-5-hydroxymethyl-2-methyl pyrimidine moiety of thiamine%3B involved in the maintenance and%2For assembly of sulfur clusters%3B periplasmic lipoporotein anchored to the inner membrane%3B part of the thiamine pyrophosphate biosynthesis pathway;Dbxref=Genbank:YP_002403494.1,GeneID:7145452;gbkey=CDS;product=thiamine biosynthesis lipoprotein ApbE;protein_id=YP_002403494.1;transl_table=11
NC_011748.1	RefSeq	gene	2525106	2526209	.	-	.	ID=gene2520;Name=ompC;Dbxref=GeneID:7149361;gbkey=Gene;gene=ompC;locus_tag=EC55989_2470
NC_011748.1	RefSeq	CDS	2525106	2526209	.	-	0	ID=cds2349;Name=YP_002403495.1;Parent=gene2520;Note=allows for ions and hydrophilic solutes to cross the outer membrane;Dbxref=Genbank:YP_002403495.1,GeneID:7149361;gbkey=CDS;product=outer membrane porin protein C;protein_id=YP_002403495.1;transl_table=11
NC_011748.1	RefSeq	gene	2526544	2526636	.	+	.	ID=gene2521;Name=micF;Dbxref=GeneID:7147066;gbkey=Gene;gene=micF;locus_tag=EC55989_misc_RNA_53
NC_011748.1	RefSeq	transcript	2526544	2526636	.	+	.	ID=rna98;Parent=gene2521;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 2439487%3B Product type n : RNA;Dbxref=GeneID:7147066;gbkey=misc_RNA;product=MicF
NC_011748.1	RefSeq	exon	2526544	2526636	.	+	.	ID=id195;Parent=rna98;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 2439487%3B Product type n : RNA;Dbxref=GeneID:7147066;gbkey=misc_RNA;product=MicF
NC_011748.1	RefSeq	gene	2526948	2529620	.	+	.	ID=gene2522;Name=rcsD;Dbxref=GeneID:7146856;gbkey=Gene;gene=rcsD;locus_tag=EC55989_2471
NC_011748.1	RefSeq	CDS	2526948	2529620	.	+	0	ID=cds2350;Name=YP_002403496.1;Parent=gene2522;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 11758943%2C 12864862%2C 21206231%2C 2404948%2C 7984428%3B Product type r : regulator;Dbxref=Genbank:YP_002403496.1,GeneID:7146856;gbkey=CDS;product=phosphotransfer intermediate protein in two-component regulatory system with RcsBC;protein_id=YP_002403496.1;transl_table=11
NC_011748.1	RefSeq	gene	2529637	2530287	.	+	.	ID=gene2523;Name=rcsB;Dbxref=GeneID:7147350;gbkey=Gene;gene=rcsB;locus_tag=EC55989_2472
NC_011748.1	RefSeq	CDS	2529637	2530287	.	+	0	ID=cds2351;Name=YP_002403497.1;Parent=gene2523;Note=two-component response regulator RscB regulates the genes involved in capsule biosynthesis and cell division%3B probably phosphorylated by RcsC or RcsF;Dbxref=Genbank:YP_002403497.1,GeneID:7147350;gbkey=CDS;product=transcriptional regulator RcsB;protein_id=YP_002403497.1;transl_table=11
NC_011748.1	RefSeq	gene	2530487	2533288	.	-	.	ID=gene2524;Name=rcsC;Dbxref=GeneID:7147348;gbkey=Gene;gene=rcsC;locus_tag=EC55989_2473
NC_011748.1	RefSeq	CDS	2530487	2533288	.	-	0	ID=cds2352;Name=YP_002403498.1;Parent=gene2524;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 11758943%2C 12864862%2C 14651646%2C 20032358%2C 21450811%2C 88227838%2C 90130299%2C 92048476%2C 9209051%2C 2404948%2C 8366025%3B Product type r : regulator;Dbxref=Genbank:YP_002403498.1,GeneID:7147348;gbkey=CDS;product=hybrid sensory kinase in two-component regulatory system with RcsB and YojN;protein_id=YP_002403498.1;transl_table=11
NC_011748.1	RefSeq	gene	2533611	2534387	.	-	.	ID=gene2525;Name=yfaP;Dbxref=GeneID:7147349;gbkey=Gene;gene=yfaP;locus_tag=EC55989_2474
NC_011748.1	RefSeq	CDS	2533611	2534387	.	-	0	ID=cds2353;Name=YP_002403499.1;Parent=gene2525;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403499.1,GeneID:7147349;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403499.1;transl_table=11
NC_011748.1	RefSeq	gene	2534392	2536041	.	-	.	ID=gene2526;Name=yfaQ;Dbxref=GeneID:7148686;gbkey=Gene;gene=yfaQ;locus_tag=EC55989_2475
NC_011748.1	RefSeq	CDS	2534392	2536041	.	-	0	ID=cds2354;Name=YP_002403500.1;Parent=gene2526;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403500.1,GeneID:7148686;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403500.1;transl_table=11
NC_011748.1	RefSeq	gene	2536042	2540661	.	-	.	ID=gene2527;Name=EC55989_2476;Dbxref=GeneID:7148687;gbkey=Gene;locus_tag=EC55989_2476
NC_011748.1	RefSeq	CDS	2536042	2540661	.	-	0	ID=cds2355;Name=YP_002403501.1;Parent=gene2527;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002403501.1,GeneID:7148687;gbkey=CDS;product=large extracellular alpha-helical protein;protein_id=YP_002403501.1;transl_table=11
NC_011748.1	RefSeq	gene	2540580	2541203	.	-	.	ID=gene2528;Name=yfaT;Dbxref=GeneID:7144773;gbkey=Gene;gene=yfaT;locus_tag=EC55989_2477
NC_011748.1	RefSeq	CDS	2540580	2541203	.	-	0	ID=cds2356;Name=YP_002403502.1;Parent=gene2528;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403502.1,GeneID:7144773;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403502.1;transl_table=11
NC_011748.1	RefSeq	gene	2541200	2542888	.	-	.	ID=gene2529;Name=yfaA;Dbxref=GeneID:7148688;gbkey=Gene;gene=yfaA;locus_tag=EC55989_2478
NC_011748.1	RefSeq	CDS	2541200	2542888	.	-	0	ID=cds2357;Name=YP_002403503.1;Parent=gene2529;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403503.1,GeneID:7148688;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403503.1;transl_table=11
NC_011748.1	RefSeq	gene	2543037	2545664	.	-	.	ID=gene2530;Name=gyrA;Dbxref=GeneID:7148680;gbkey=Gene;gene=gyrA;locus_tag=EC55989_2479
NC_011748.1	RefSeq	CDS	2543037	2545664	.	-	0	ID=cds2358;Name=YP_002403504.1;Parent=gene2530;Note=negatively supercoils closed circular double-stranded DNA;Dbxref=Genbank:YP_002403504.1,GeneID:7148680;gbkey=CDS;product=DNA gyrase subunit A;protein_id=YP_002403504.1;transl_table=11
NC_011748.1	RefSeq	STS	2544024	2544690	.	+	.	ID=id196;Dbxref=UniSTS:474268;gbkey=STS
NC_011748.1	RefSeq	gene	2545811	2546533	.	+	.	ID=gene2531;Name=ubiG;Dbxref=GeneID:7146388;gbkey=Gene;gene=ubiG;locus_tag=EC55989_2480
NC_011748.1	RefSeq	CDS	2545811	2546533	.	+	0	ID=cds2359;Name=YP_002403505.1;Parent=gene2531;Note=Involved in ubiquinone biosynthesis;Dbxref=Genbank:YP_002403505.1,GeneID:7146388;gbkey=CDS;product=3-demethylubiquinone-9 3-methyltransferase;protein_id=YP_002403505.1;transl_table=11
NC_011748.1	RefSeq	gene	2546661	2550395	.	-	.	ID=gene2532;Name=yfaL;Dbxref=GeneID:7147893;gbkey=Gene;gene=yfaL;locus_tag=EC55989_2481
NC_011748.1	RefSeq	CDS	2546661	2550395	.	-	0	ID=cds2360;Name=YP_002403506.1;Parent=gene2532;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 15659678%3B Product type f : factor;Dbxref=Genbank:YP_002403506.1,GeneID:7147893;gbkey=CDS;product=adhesin;protein_id=YP_002403506.1;transl_table=11
NC_011748.1	RefSeq	gene	2551091	2553376	.	+	.	ID=gene2533;Name=nrdA;Dbxref=GeneID:7148684;gbkey=Gene;gene=nrdA;locus_tag=EC55989_2482
NC_011748.1	RefSeq	CDS	2551091	2553376	.	+	0	ID=cds2361;Name=YP_002403507.1;Parent=gene2533;Note=Catalyzes the rate-limiting step in dNTP synthesis;Dbxref=Genbank:YP_002403507.1,GeneID:7148684;gbkey=CDS;product=ribonucleotide-diphosphate reductase subunit alpha;protein_id=YP_002403507.1;transl_table=11
NC_011748.1	RefSeq	gene	2553465	2554595	.	+	.	ID=gene2534;Name=nrdB;Dbxref=GeneID:7147018;gbkey=Gene;gene=nrdB;locus_tag=EC55989_2483
NC_011748.1	RefSeq	CDS	2553465	2554595	.	+	0	ID=cds2362;Name=YP_002403508.1;Parent=gene2534;Note=B2 or R2 protein%3B type 1a enzyme%3B catalyzes the rate-limiting step in dNTP synthesis%3B converts nucleotides to deoxynucleotides%3B forms a homodimer and then a multimeric complex with NrdA;Dbxref=Genbank:YP_002403508.1,GeneID:7147018;gbkey=CDS;product=ribonucleotide-diphosphate reductase subunit beta;protein_id=YP_002403508.1;transl_table=11
NC_011748.1	RefSeq	gene	2554595	2554849	.	+	.	ID=gene2535;Name=yfaE;Dbxref=GeneID:7147019;gbkey=Gene;gene=yfaE;locus_tag=EC55989_2484
NC_011748.1	RefSeq	CDS	2554595	2554849	.	+	0	ID=cds2363;Name=YP_002403509.1;Parent=gene2535;Note=plays a role in maintenance and possibly the biosynthesis of diferric-tyrosyl radical cofactor%2C essential for nucleotide reduction catalyzed by ribonucleotide reductases;Dbxref=Genbank:YP_002403509.1,GeneID:7147019;gbkey=CDS;product=2Fe-2S ferredoxin;protein_id=YP_002403509.1;transl_table=11
NC_011748.1	RefSeq	gene	2554903	2555553	.	-	.	ID=gene2536;Name=inaA;Dbxref=GeneID:7148682;gbkey=Gene;gene=inaA;locus_tag=EC55989_2485
NC_011748.1	RefSeq	CDS	2554903	2555553	.	-	0	ID=cds2364;Name=YP_002403510.1;Parent=gene2536;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 92165728%2C 1537798%2C 6087316;Dbxref=Genbank:YP_002403510.1,GeneID:7148682;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403510.1;transl_table=11
NC_011748.1	RefSeq	gene	2555633	2555716	.	-	.	ID=gene2537;Name=EC55989_2486;Dbxref=GeneID:7146564;gbkey=Gene;locus_tag=EC55989_2486;pseudo=true
NC_011748.1	RefSeq	region	2555633	2555716	.	-	.	ID=id197;Note=fragment of  antibiotic efflux protein %28 antibiotic resistance protein%29 %28partial%29%3BEvidence 7 : Gene remnant%3B Product type pt :  transporter;Dbxref=GeneID:7146564;gbkey=misc_feature
NC_011748.1	RefSeq	gene	2555768	2555974	.	+	.	ID=gene2538;Name=yfaH;Dbxref=GeneID:7144774;gbkey=Gene;gene=yfaH;locus_tag=EC55989_2487
NC_011748.1	RefSeq	CDS	2555768	2555974	.	+	0	ID=cds2365;Name=YP_002403511.1;Parent=gene2538;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403511.1,GeneID:7144774;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403511.1;transl_table=11
NC_011748.1	RefSeq	gene	2556016	2557092	.	-	.	ID=gene2539;Name=glpQ;Dbxref=GeneID:7148683;gbkey=Gene;gene=glpQ;locus_tag=EC55989_2488
NC_011748.1	RefSeq	CDS	2556016	2557092	.	-	0	ID=cds2366;Name=YP_002403512.1;Parent=gene2539;Note=hydrolyzes deacylated phospholipids to glycerol 3-phosphate and the corresponding alcohols%3B periplasmic;Dbxref=Genbank:YP_002403512.1,GeneID:7148683;gbkey=CDS;product=glycerophosphodiester phosphodiesterase;protein_id=YP_002403512.1;transl_table=11
NC_011748.1	RefSeq	gene	2557097	2558455	.	-	.	ID=gene2540;Name=glpT;Dbxref=GeneID:7146323;gbkey=Gene;gene=glpT;locus_tag=EC55989_2489
NC_011748.1	RefSeq	CDS	2557097	2558455	.	-	0	ID=cds2367;Name=YP_002403513.1;Parent=gene2540;Note=catalyzes the uptake of glycerol-3-phosphate into the cell with the simultaneous export of inorganic phosphate from the cell;Dbxref=Genbank:YP_002403513.1,GeneID:7146323;gbkey=CDS;product=sn-glycerol-3-phosphate transporter;protein_id=YP_002403513.1;transl_table=11
NC_011748.1	RefSeq	gene	2558728	2560356	.	+	.	ID=gene2541;Name=glpA;Dbxref=GeneID:7146325;gbkey=Gene;gene=glpA;locus_tag=EC55989_2490
NC_011748.1	RefSeq	CDS	2558728	2560356	.	+	0	ID=cds2368;Name=YP_002403514.1;Parent=gene2541;Note=anaerobic%2C catalyzes the conversion of glycerol 3-phosphate to dihydroxyacetone using fumarate or nitrate as electron acceptor;Dbxref=Genbank:YP_002403514.1,GeneID:7146325;gbkey=CDS;product=sn-glycerol-3-phosphate dehydrogenase subunit A;protein_id=YP_002403514.1;transl_table=11
NC_011748.1	RefSeq	gene	2560346	2561605	.	+	.	ID=gene2542;Name=glpB;Dbxref=GeneID:7146315;gbkey=Gene;gene=glpB;locus_tag=EC55989_2491
NC_011748.1	RefSeq	CDS	2560346	2561605	.	+	0	ID=cds2369;Name=YP_002403515.1;Parent=gene2542;Note=sn-glycerol-3-phosphate dehydrogenase %28anaerobic%29%3B catalyzes the formation of dihydroxyacetone from glycerol 3-phosphate%3B part of GlpABC complex%3B presumably this subunit is responsible for membrane interactions and contains iron-sulfur clusters;Dbxref=Genbank:YP_002403515.1,GeneID:7146315;gbkey=CDS;product=anaerobic glycerol-3-phosphate dehydrogenase subunit B;protein_id=YP_002403515.1;transl_table=11
NC_011748.1	RefSeq	gene	2561602	2562792	.	+	.	ID=gene2543;Name=glpC;Dbxref=GeneID:7146316;gbkey=Gene;gene=glpC;locus_tag=EC55989_2492
NC_011748.1	RefSeq	CDS	2561602	2562792	.	+	0	ID=cds2370;Name=YP_002403516.1;Parent=gene2543;Note=anaerobic%3B with GlpAB catalyzes the conversion of glycerol-3-phosphate to dihydroxyacetone phosphate;Dbxref=Genbank:YP_002403516.1,GeneID:7146316;gbkey=CDS;product=sn-glycerol-3-phosphate dehydrogenase subunit C;protein_id=YP_002403516.1;transl_table=11
NC_011748.1	RefSeq	gene	2562986	2563888	.	+	.	ID=gene2544;Name=yfaD;Dbxref=GeneID:7146317;gbkey=Gene;gene=yfaD;locus_tag=EC55989_2493
NC_011748.1	RefSeq	CDS	2562986	2563888	.	+	0	ID=cds2371;Name=YP_002403517.1;Parent=gene2544;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403517.1,GeneID:7146317;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403517.1;transl_table=11
NC_011748.1	RefSeq	gene	2563929	2564441	.	-	.	ID=gene2545;Name=yfaU;Dbxref=GeneID:7148681;gbkey=Gene;gene=yfaU;locus_tag=EC55989_2494;pseudo=true
NC_011748.1	RefSeq	region	2563929	2564441	.	-	.	ID=id198;Note=fragment of  2%2C4-dihydroxyhept-2-ene-1%2C 7-dioic acid-like aldolase %28partial%29%3BEvidence 7 : Gene remnant%3B Product type pe :  enzyme;Dbxref=GeneID:7148681;gbkey=misc_feature
NC_011748.1	RefSeq	gene	2564454	2565656	.	-	.	ID=gene2546;Name=yfaY;Dbxref=GeneID:7148689;gbkey=Gene;gene=yfaY;locus_tag=EC55989_2495
NC_011748.1	RefSeq	CDS	2564454	2565656	.	-	0	ID=cds2372;Name=YP_002403518.1;Parent=gene2546;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403518.1,GeneID:7148689;gbkey=CDS;product=competence damage-inducible protein A;protein_id=YP_002403518.1;transl_table=11
NC_011748.1	RefSeq	gene	2565756	2566298	.	-	.	ID=gene2547;Name=yfaZ;Dbxref=GeneID:7148690;gbkey=Gene;gene=yfaZ;locus_tag=EC55989_2496
NC_011748.1	RefSeq	CDS	2565756	2566298	.	-	0	ID=cds2373;Name=YP_002403519.1;Parent=gene2547;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002403519.1,GeneID:7148690;gbkey=CDS;product=outer membrane porin protein;protein_id=YP_002403519.1;transl_table=11
NC_011748.1	RefSeq	gene	2566577	2567002	.	+	.	ID=gene2548;Name=yfaO;Dbxref=GeneID:7148691;gbkey=Gene;gene=yfaO;locus_tag=EC55989_2497
NC_011748.1	RefSeq	CDS	2566577	2567002	.	+	0	ID=cds2374;Name=YP_002403520.1;Parent=gene2548;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 16430214%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002403520.1,GeneID:7148691;gbkey=CDS;product=NUDIX hydrolase;protein_id=YP_002403520.1;transl_table=11
NC_011748.1	RefSeq	gene	2567041	2567643	.	-	.	ID=gene2549;Name=ais;Dbxref=GeneID:7148685;gbkey=Gene;gene=ais;locus_tag=EC55989_2498
NC_011748.1	RefSeq	CDS	2567041	2567643	.	-	0	ID=cds2375;Name=YP_002403521.1;Parent=gene2549;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403521.1,GeneID:7148685;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403521.1;transl_table=11
NC_011748.1	RefSeq	gene	2567933	2569090	.	+	.	ID=gene2550;Name=yfbE;Dbxref=GeneID:7145477;gbkey=Gene;gene=yfbE;locus_tag=EC55989_2499
NC_011748.1	RefSeq	CDS	2567933	2569090	.	+	0	ID=cds2376;Name=YP_002403522.1;Parent=gene2550;Note=catalyzes the conversion of UDP-4-keto-arabinose to UDP-4-amino-4-deoxy-L-arabinose;Dbxref=Genbank:YP_002403522.1,GeneID:7145477;gbkey=CDS;product=UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase;protein_id=YP_002403522.1;transl_table=11
NC_011748.1	RefSeq	gene	2569094	2570062	.	+	.	ID=gene2551;Name=yfbF;Dbxref=GeneID:7148693;gbkey=Gene;gene=yfbF;locus_tag=EC55989_2500
NC_011748.1	RefSeq	CDS	2569094	2570062	.	+	0	ID=cds2377;Name=YP_002403523.1;Parent=gene2551;Note=catalyzes the transfer of 4-deoxy-4-formamido-L-arabinose from UDP to undecaprenyl phosphate;Dbxref=Genbank:YP_002403523.1,GeneID:7148693;gbkey=CDS;product=undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase;protein_id=YP_002403523.1;transl_table=11
NC_011748.1	RefSeq	gene	2570062	2572044	.	+	.	ID=gene2552;Name=yfbG;Dbxref=GeneID:7148694;gbkey=Gene;gene=yfbG;locus_tag=EC55989_2501
NC_011748.1	RefSeq	CDS	2570062	2572044	.	+	0	ID=cds2378;Name=YP_002403524.1;Parent=gene2552;Note=Bifunctional polymyxin resistance arnA protein%3B catalyzes the decarboxylation of UDP-glucuronic acid to UDP-4-keto-arabinose and the addition of a formyl group to UDP-4-amino-4-deoxy-L-arabinose to form UDP-L-4-formamido-arabinose%3B active in certain mutant strains;Dbxref=Genbank:YP_002403524.1,GeneID:7148694;gbkey=CDS;product=bifunctional UDP-glucuronic acid decarboxylase%2FUDP-4-amino-4-deoxy-L-arabinose formyltransferase;protein_id=YP_002403524.1;transl_table=11
NC_011748.1	RefSeq	gene	2572041	2572931	.	+	.	ID=gene2553;Name=yfbH;Dbxref=GeneID:7148695;gbkey=Gene;gene=yfbH;locus_tag=EC55989_2502
NC_011748.1	RefSeq	CDS	2572041	2572931	.	+	0	ID=cds2379;Name=YP_002403525.1;Parent=gene2553;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403525.1,GeneID:7148695;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403525.1;transl_table=11
NC_011748.1	RefSeq	gene	2572931	2574583	.	+	.	ID=gene2554;Name=arnT;Dbxref=GeneID:7148696;gbkey=Gene;gene=arnT;locus_tag=EC55989_2504
NC_011748.1	RefSeq	CDS	2572931	2574583	.	+	0	ID=cds2380;Name=YP_002403526.1;Parent=gene2554;Note=catalyzes the addition of 4-amino-4-deoxy-L-arabinose to lipid A;Dbxref=Genbank:YP_002403526.1,GeneID:7148696;gbkey=CDS;product=4-amino-4-deoxy-L-arabinose transferase;protein_id=YP_002403526.1;transl_table=11
NC_011748.1	RefSeq	gene	2574580	2574915	.	+	.	ID=gene2555;Name=yfbW;Dbxref=GeneID:7145538;gbkey=Gene;gene=yfbW;locus_tag=EC55989_2505
NC_011748.1	RefSeq	CDS	2574580	2574915	.	+	0	ID=cds2381;Name=YP_002403527.1;Parent=gene2555;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403527.1,GeneID:7145538;gbkey=CDS;product=inner membrane protein;protein_id=YP_002403527.1;transl_table=11
NC_011748.1	RefSeq	gene	2574915	2575301	.	+	.	ID=gene2556;Name=yfbJ;Dbxref=GeneID:7148705;gbkey=Gene;gene=yfbJ;locus_tag=EC55989_2506
NC_011748.1	RefSeq	CDS	2574915	2575301	.	+	0	ID=cds2382;Name=YP_002403528.1;Parent=gene2556;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002403528.1,GeneID:7148705;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403528.1;transl_table=11
NC_011748.1	RefSeq	gene	2575295	2575561	.	-	.	ID=gene2557;Name=pmrD;Dbxref=GeneID:7148697;gbkey=Gene;gene=pmrD;locus_tag=EC55989_2507
NC_011748.1	RefSeq	CDS	2575295	2575561	.	-	0	ID=cds2383;Name=YP_002403529.1;Parent=gene2557;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 96015440%2C 15569938%3B Product type pt :  transporter;Dbxref=Genbank:YP_002403529.1,GeneID:7148697;gbkey=CDS;product=polymyxin resistance protein B;protein_id=YP_002403529.1;transl_table=11
NC_011748.1	RefSeq	gene	2575671	2577026	.	-	.	ID=gene2558;Name=menE;Dbxref=GeneID:7147200;gbkey=Gene;gene=menE;locus_tag=EC55989_2508
NC_011748.1	RefSeq	CDS	2575671	2577026	.	-	0	ID=cds2384;Name=YP_002403530.1;Parent=gene2558;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 96186953%2C 8626063%3B Product type e : enzyme;Dbxref=Genbank:YP_002403530.1,GeneID:7147200;gbkey=CDS;product=O-succinylbenzoic acid--CoA ligase;protein_id=YP_002403530.1;transl_table=11
NC_011748.1	RefSeq	STS	2575810	2575973	.	+	.	ID=id199;Dbxref=UniSTS:64087;gbkey=STS
NC_011748.1	RefSeq	gene	2577023	2577985	.	-	.	ID=gene2559;Name=menC;Dbxref=GeneID:7146821;gbkey=Gene;gene=menC;locus_tag=EC55989_2509
NC_011748.1	RefSeq	CDS	2577023	2577985	.	-	0	ID=cds2385;Name=YP_002403531.1;Parent=gene2559;Note=catalyzes the dehydration of 2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylic acid to form O-succinylbenzoate;Dbxref=Genbank:YP_002403531.1,GeneID:7146821;gbkey=CDS;product=O-succinylbenzoate synthase;protein_id=YP_002403531.1;transl_table=11
NC_011748.1	RefSeq	gene	2577985	2578842	.	-	.	ID=gene2560;Name=menB;Dbxref=GeneID:7146819;gbkey=Gene;gene=menB;locus_tag=EC55989_2510
NC_011748.1	RefSeq	CDS	2577985	2578842	.	-	0	ID=cds2386;Name=YP_002403532.1;Parent=gene2560;Note=catalyzes the formation of 1%2C4-dihydroxy-2-naphthoate from O-succinylbenzoyl-CoA;Dbxref=Genbank:YP_002403532.1,GeneID:7146819;gbkey=CDS;product=naphthoate synthase;protein_id=YP_002403532.1;transl_table=11
NC_011748.1	RefSeq	gene	2578857	2579615	.	-	.	ID=gene2561;Name=yfbB;Dbxref=GeneID:7146818;gbkey=Gene;gene=yfbB;locus_tag=EC55989_2511
NC_011748.1	RefSeq	CDS	2578857	2579615	.	-	0	ID=cds2387;Name=YP_002403533.1;Parent=gene2561;Note=catalyzes the hydrolysis of the thioester bond in palmitoyl-CoA;Dbxref=Genbank:YP_002403533.1,GeneID:7146818;gbkey=CDS;product=acyl-CoA thioester hydrolase;protein_id=YP_002403533.1;transl_table=11
NC_011748.1	RefSeq	gene	2579612	2581282	.	-	.	ID=gene2562;Name=menD;Dbxref=GeneID:7148692;gbkey=Gene;gene=menD;locus_tag=EC55989_2512
NC_011748.1	RefSeq	CDS	2579612	2581282	.	-	0	ID=cds2388;Name=YP_002403534.1;Parent=gene2562;Note=SEPHCHC synthase%3B forms 5-enolpyruvoyl-6-hydroxy-2-succinyl-cyclohex-3-ene-1-carboxylate from 2-oxoglutarate and isochorismate in menaquinone biosynthesis;Dbxref=Genbank:YP_002403534.1,GeneID:7148692;gbkey=CDS;product=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase;protein_id=YP_002403534.1;transl_table=11
NC_011748.1	RefSeq	gene	2581371	2582666	.	-	.	ID=gene2563;Name=menF;Dbxref=GeneID:7146820;gbkey=Gene;gene=menF;locus_tag=EC55989_2513
NC_011748.1	RefSeq	CDS	2581371	2582666	.	-	0	ID=cds2389;Name=YP_002403535.1;Parent=gene2563;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 9150206%2C 96140724%2C 2666397%2C 7984428%2C 8549818%2C 8764478%3B Product type e : enzyme;Dbxref=Genbank:YP_002403535.1,GeneID:7146820;gbkey=CDS;product=isochorismate synthase 2;protein_id=YP_002403535.1;transl_table=11
NC_011748.1	RefSeq	gene	2582745	2583050	.	-	.	ID=gene2564;Name=elaB;Dbxref=GeneID:7146822;gbkey=Gene;gene=elaB;locus_tag=EC55989_2514
NC_011748.1	RefSeq	CDS	2582745	2583050	.	-	0	ID=cds2390;Name=YP_002403536.1;Parent=gene2564;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403536.1,GeneID:7146822;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403536.1;transl_table=11
NC_011748.1	RefSeq	gene	2583105	2583566	.	-	.	ID=gene2565;Name=elaA;Dbxref=GeneID:7145984;gbkey=Gene;gene=elaA;locus_tag=EC55989_2515
NC_011748.1	RefSeq	CDS	2583105	2583566	.	-	0	ID=cds2391;Name=YP_002403537.1;Parent=gene2565;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002403537.1,GeneID:7145984;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403537.1;transl_table=11
NC_011748.1	RefSeq	gene	2583631	2584548	.	+	.	ID=gene2566;Name=elaC;Dbxref=GeneID:7145983;gbkey=Gene;gene=elaC;locus_tag=EC55989_2516
NC_011748.1	RefSeq	CDS	2583631	2584548	.	+	0	ID=cds2392;Name=YP_002403538.1;Parent=gene2566;Note=member of metallo-beta-lactamase family%3B the purified enzyme from Escherichia coli forms dimeric zinc phosphodiesterase%3B in Bacillus subtilis this protein is a 3%27-tRNA processing endoribonuclease and is essential while in Escherichia coli it is not%3B associates with two zinc ions;Dbxref=Genbank:YP_002403538.1,GeneID:7145983;gbkey=CDS;product=ribonuclease Z;protein_id=YP_002403538.1;transl_table=11
NC_011748.1	RefSeq	gene	2584736	2585956	.	+	.	ID=gene2567;Name=elaD;Dbxref=GeneID:7145985;gbkey=Gene;gene=elaD;locus_tag=EC55989_2517
NC_011748.1	RefSeq	CDS	2584736	2585956	.	+	0	ID=cds2393;Name=YP_002403539.1;Parent=gene2567;Note=ElaD%3B specific cysteine protease which targets ubiquitin and ubiquitin-like proteins covalently bound to target proteins%3B SseL in Salmonella is required for macrophage killing and virulence%2C and it is secreted by the salmonella pathogenicity island 2 type III secretion system;Dbxref=Genbank:YP_002403539.1,GeneID:7145985;gbkey=CDS;product=deubiquitinase;protein_id=YP_002403539.1;transl_table=11
NC_011748.1	RefSeq	gene	2586601	2586951	.	+	.	ID=gene2568;Name=EC55989_2518;Dbxref=GeneID:7145986;gbkey=Gene;locus_tag=EC55989_2518
NC_011748.1	RefSeq	CDS	2586601	2586951	.	+	0	ID=cds2394;Name=YP_002403540.1;Parent=gene2568;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403540.1,GeneID:7145986;gbkey=CDS;product=Zn-dependent exopeptidases;protein_id=YP_002403540.1;transl_table=11
NC_011748.1	RefSeq	gene	2587077	2587580	.	+	.	ID=gene2569;Name=yfbM;Dbxref=GeneID:7144775;gbkey=Gene;gene=yfbM;locus_tag=EC55989_2519
NC_011748.1	RefSeq	CDS	2587077	2587580	.	+	0	ID=cds2395;Name=YP_002403541.1;Parent=gene2569;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403541.1,GeneID:7144775;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403541.1;transl_table=11
NC_011748.1	RefSeq	gene	2587647	2589104	.	-	.	ID=gene2570;Name=nuoN;Dbxref=GeneID:7148698;gbkey=Gene;gene=nuoN;locus_tag=EC55989_2520
NC_011748.1	RefSeq	CDS	2587647	2589104	.	-	0	ID=cds2396;Name=YP_002403542.1;Parent=gene2570;Note=Catalyzes the transfer of electrons from NADH to quinone;Dbxref=Genbank:YP_002403542.1,GeneID:7148698;gbkey=CDS;product=NADH dehydrogenase subunit N;protein_id=YP_002403542.1;transl_table=11
NC_011748.1	RefSeq	gene	2589111	2590640	.	-	.	ID=gene2571;Name=nuoM;Dbxref=GeneID:7147055;gbkey=Gene;gene=nuoM;locus_tag=EC55989_2521
NC_011748.1	RefSeq	CDS	2589111	2590640	.	-	0	ID=cds2397;Name=YP_002403543.1;Parent=gene2571;Note=Catalyzes the transfer of electrons from NADH to quinone;Dbxref=Genbank:YP_002403543.1,GeneID:7147055;gbkey=CDS;product=NADH dehydrogenase subunit M;protein_id=YP_002403543.1;transl_table=11
NC_011748.1	RefSeq	gene	2590804	2592645	.	-	.	ID=gene2572;Name=nuoL;Dbxref=GeneID:7147054;gbkey=Gene;gene=nuoL;locus_tag=EC55989_2522
NC_011748.1	RefSeq	CDS	2590804	2592645	.	-	0	ID=cds2398;Name=YP_002403544.1;Parent=gene2572;Note=Catalyzes the transfer of electrons from NADH to ubiquinone;Dbxref=Genbank:YP_002403544.1,GeneID:7147054;gbkey=CDS;product=NADH dehydrogenase subunit L;protein_id=YP_002403544.1;transl_table=11
NC_011748.1	RefSeq	gene	2592642	2592944	.	-	.	ID=gene2573;Name=nuoK;Dbxref=GeneID:7147053;gbkey=Gene;gene=nuoK;locus_tag=EC55989_2523
NC_011748.1	RefSeq	CDS	2592642	2592944	.	-	0	ID=cds2399;Name=YP_002403545.1;Parent=gene2573;Note=Catalyzes the transfer of electrons from NADH to quinone;Dbxref=Genbank:YP_002403545.1,GeneID:7147053;gbkey=CDS;product=NADH dehydrogenase subunit K;protein_id=YP_002403545.1;transl_table=11
NC_011748.1	RefSeq	gene	2592941	2593495	.	-	.	ID=gene2574;Name=nuoJ;Dbxref=GeneID:7147052;gbkey=Gene;gene=nuoJ;locus_tag=EC55989_2524
NC_011748.1	RefSeq	CDS	2592941	2593495	.	-	0	ID=cds2400;Name=YP_002403546.1;Parent=gene2574;Note=Catalyzes the transfer of electrons from NADH to quinone;Dbxref=Genbank:YP_002403546.1,GeneID:7147052;gbkey=CDS;product=NADH dehydrogenase subunit J;protein_id=YP_002403546.1;transl_table=11
NC_011748.1	RefSeq	gene	2593507	2594049	.	-	.	ID=gene2575;Name=nuoI;Dbxref=GeneID:7147051;gbkey=Gene;gene=nuoI;locus_tag=EC55989_2525
NC_011748.1	RefSeq	CDS	2593507	2594049	.	-	0	ID=cds2401;Name=YP_002403547.1;Parent=gene2575;Note=Catalyzes the transfer of electrons from NADH to quinone;Dbxref=Genbank:YP_002403547.1,GeneID:7147051;gbkey=CDS;product=NADH dehydrogenase subunit I;protein_id=YP_002403547.1;transl_table=11
NC_011748.1	RefSeq	gene	2594064	2595041	.	-	.	ID=gene2576;Name=nuoH;Dbxref=GeneID:7147050;gbkey=Gene;gene=nuoH;locus_tag=EC55989_2526
NC_011748.1	RefSeq	CDS	2594064	2595041	.	-	0	ID=cds2402;Name=YP_002403548.1;Parent=gene2576;Note=Catalyzes the transfer of electrons from NADH to quinone;Dbxref=Genbank:YP_002403548.1,GeneID:7147050;gbkey=CDS;product=NADH dehydrogenase subunit H;protein_id=YP_002403548.1;transl_table=11
NC_011748.1	RefSeq	gene	2595038	2597770	.	-	.	ID=gene2577;Name=nuoG;Dbxref=GeneID:7147049;gbkey=Gene;gene=nuoG;locus_tag=EC55989_2527
NC_011748.1	RefSeq	CDS	2595038	2597770	.	-	0	ID=cds2403;Name=YP_002403549.1;Parent=gene2577;Note=Catalyzes the transfer of electrons from NADH to quinone;Dbxref=Genbank:YP_002403549.1,GeneID:7147049;gbkey=CDS;product=NADH dehydrogenase subunit G;protein_id=YP_002403549.1;transl_table=11
NC_011748.1	RefSeq	gene	2597817	2599154	.	-	.	ID=gene2578;Name=nuoF;Dbxref=GeneID:7147048;gbkey=Gene;gene=nuoF;locus_tag=EC55989_2528
NC_011748.1	RefSeq	CDS	2597817	2599154	.	-	0	ID=cds2404;Name=YP_002403550.1;Parent=gene2578;Note=shuttles electrons from NADH%2C via FMN and iron-sulfur %28Fe-S%29 centers%2C to quinones in the respiratory chain%3B NuoF is part of the soluble NADH dehydrogenase fragment%2C which represents the electron input part of NADH dehydrogenase;Dbxref=Genbank:YP_002403550.1,GeneID:7147048;gbkey=CDS;product=NADH dehydrogenase I subunit F;protein_id=YP_002403550.1;transl_table=11
NC_011748.1	RefSeq	gene	2599151	2599651	.	-	.	ID=gene2579;Name=nuoE;Dbxref=GeneID:7147047;gbkey=Gene;gene=nuoE;locus_tag=EC55989_2529
NC_011748.1	RefSeq	CDS	2599151	2599651	.	-	0	ID=cds2405;Name=YP_002403551.1;Parent=gene2579;Note=Catalyzes the transfer of electrons from NADH to quinone;Dbxref=Genbank:YP_002403551.1,GeneID:7147047;gbkey=CDS;product=NADH dehydrogenase subunit E;protein_id=YP_002403551.1;transl_table=11
NC_011748.1	RefSeq	gene	2599654	2601456	.	-	.	ID=gene2580;Name=nuoC;Dbxref=GeneID:7147046;gbkey=Gene;gene=nuoC;locus_tag=EC55989_2530
NC_011748.1	RefSeq	CDS	2599654	2601456	.	-	0	ID=cds2406;Name=YP_002403552.1;Parent=gene2580;Note=NuoCD%3B NDH-1 shuttles electrons from NADH%2C via FMN and iron-sulfur %28Fe-S%29 centers%2C to quinones in the respiratory chain%3B subunits NuoCD%2C E%2C F%2C and G constitute the peripheral sector of the complex%3B in Escherichia coli this gene encodes a fusion protein of NuoC and NuoD that are found separate in other organisms;Dbxref=Genbank:YP_002403552.1,GeneID:7147046;gbkey=CDS;product=bifunctional NADH:ubiquinone oxidoreductase subunit C%2FD;protein_id=YP_002403552.1;transl_table=11
NC_011748.1	RefSeq	gene	2601550	2602212	.	-	.	ID=gene2581;Name=nuoB;Dbxref=GeneID:7147045;gbkey=Gene;gene=nuoB;locus_tag=EC55989_2531
NC_011748.1	RefSeq	CDS	2601550	2602212	.	-	0	ID=cds2407;Name=YP_002403553.1;Parent=gene2581;Note=The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen;Dbxref=Genbank:YP_002403553.1,GeneID:7147045;gbkey=CDS;product=NADH dehydrogenase subunit B;protein_id=YP_002403553.1;transl_table=11
NC_011748.1	RefSeq	gene	2602228	2602671	.	-	.	ID=gene2582;Name=nuoA;Dbxref=GeneID:7147044;gbkey=Gene;gene=nuoA;locus_tag=EC55989_2532
NC_011748.1	RefSeq	CDS	2602228	2602671	.	-	0	ID=cds2408;Name=YP_002403554.1;Parent=gene2582;Note=Catalyzes the transfer of electrons from NADH to quinone;Dbxref=Genbank:YP_002403554.1,GeneID:7147044;gbkey=CDS;product=NADH dehydrogenase subunit A;protein_id=YP_002403554.1;transl_table=11
NC_011748.1	RefSeq	gene	2603302	2604240	.	-	.	ID=gene2583;Name=lrhA;Dbxref=GeneID:7147043;gbkey=Gene;gene=lrhA;locus_tag=EC55989_2533
NC_011748.1	RefSeq	CDS	2603302	2604240	.	-	0	ID=cds2409;Name=YP_002403555.1;Parent=gene2583;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 12123461%2C 9882671%2C 7565112%3B Product type r : regulator;Dbxref=Genbank:YP_002403555.1,GeneID:7147043;gbkey=CDS;product=DNA-binding transcriptional repressor of flagellar%2C motility and chemotaxis genes;protein_id=YP_002403555.1;transl_table=11
NC_011748.1	RefSeq	gene	2605160	2606377	.	+	.	ID=gene2584;Name=yfbQ;Dbxref=GeneID:7146743;gbkey=Gene;gene=yfbQ;locus_tag=EC55989_2534
NC_011748.1	RefSeq	CDS	2605160	2606377	.	+	0	ID=cds2410;Name=YP_002403556.1;Parent=gene2584;Note=broad specificity%3B family IV%3B in Corynebacterium glutamicum this protein can use glutamate%2C 2-aminobutyrate%2C and aspartate as amino donors and pyruvate as the acceptor;Dbxref=Genbank:YP_002403556.1,GeneID:7146743;gbkey=CDS;product=aminotransferase;protein_id=YP_002403556.1;transl_table=11
NC_011748.1	RefSeq	gene	2606461	2607060	.	+	.	ID=gene2585;Name=yfbR;Dbxref=GeneID:7148699;gbkey=Gene;gene=yfbR;locus_tag=EC55989_2535
NC_011748.1	RefSeq	CDS	2606461	2607060	.	+	0	ID=cds2411;Name=YP_002403557.1;Parent=gene2585;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 15489502%3B Product type e : enzyme;Dbxref=Genbank:YP_002403557.1,GeneID:7148699;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403557.1;transl_table=11
NC_011748.1	RefSeq	STS	2606791	2607997	.	+	.	ID=id200;Dbxref=UniSTS:515546;gbkey=STS
NC_011748.1	RefSeq	gene	2607119	2608951	.	-	.	ID=gene2586;Name=yfbS;Dbxref=GeneID:7148700;gbkey=Gene;gene=yfbS;locus_tag=EC55989_2536
NC_011748.1	RefSeq	CDS	2607119	2608951	.	-	0	ID=cds2412;Name=YP_002403558.1;Parent=gene2586;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002403558.1,GeneID:7148700;gbkey=CDS;product=transporter;protein_id=YP_002403558.1;transl_table=11
NC_011748.1	RefSeq	gene	2609038	2609688	.	-	.	ID=gene2587;Name=yfbT;Dbxref=GeneID:7148701;gbkey=Gene;gene=yfbT;locus_tag=EC55989_2537
NC_011748.1	RefSeq	CDS	2609038	2609688	.	-	0	ID=cds2413;Name=YP_002403559.1;Parent=gene2587;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002403559.1,GeneID:7148701;gbkey=CDS;product=phosphatase;protein_id=YP_002403559.1;transl_table=11
NC_011748.1	RefSeq	gene	2609699	2610193	.	-	.	ID=gene2588;Name=yfbU;Dbxref=GeneID:7148702;gbkey=Gene;gene=yfbU;locus_tag=EC55989_2538
NC_011748.1	RefSeq	CDS	2609699	2610193	.	-	0	ID=cds2414;Name=YP_002403560.1;Parent=gene2588;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403560.1,GeneID:7148702;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403560.1;transl_table=11
NC_011748.1	RefSeq	gene	2610276	2610731	.	-	.	ID=gene2589;Name=yfbV;Dbxref=GeneID:7148703;gbkey=Gene;gene=yfbV;locus_tag=EC55989_2539
NC_011748.1	RefSeq	CDS	2610276	2610731	.	-	0	ID=cds2415;Name=YP_002403561.1;Parent=gene2589;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002403561.1,GeneID:7148703;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403561.1;transl_table=11
NC_011748.1	RefSeq	gene	2611069	2612271	.	+	.	ID=gene2590;Name=ackA;Dbxref=GeneID:7148704;gbkey=Gene;gene=ackA;locus_tag=EC55989_2540
NC_011748.1	RefSeq	CDS	2611069	2612271	.	+	0	ID=cds2416;Name=YP_002403562.1;Parent=gene2590;Note=AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation%3B utilizes magnesium and ATP%3B also involved in conversion of acetate to aceyl-CoA;Dbxref=Genbank:YP_002403562.1,GeneID:7148704;gbkey=CDS;product=acetate kinase;protein_id=YP_002403562.1;transl_table=11
NC_011748.1	RefSeq	gene	2612346	2614490	.	+	.	ID=gene2591;Name=pta;Dbxref=GeneID:7145437;gbkey=Gene;gene=pta;locus_tag=EC55989_2541
NC_011748.1	RefSeq	CDS	2612346	2614490	.	+	0	ID=cds2417;Name=YP_002403563.1;Parent=gene2591;Note=catalyzes the synthesis of acetylphosphate or propionylphosphate from acetyl-CoA or propionyl-CoA and inorganic phosphate%3B when using propionyl-CoA the enzyme is functioning in the anaerobic pathway catabolizing threonine to propionate;Dbxref=Genbank:YP_002403563.1,GeneID:7145437;gbkey=CDS;product=phosphate acetyltransferase;protein_id=YP_002403563.1;transl_table=11
NC_011748.1	RefSeq	gene	2614680	2616200	.	+	.	ID=gene2592;Name=yfcC;Dbxref=GeneID:7147281;gbkey=Gene;gene=yfcC;locus_tag=EC55989_2542
NC_011748.1	RefSeq	CDS	2614680	2616200	.	+	0	ID=cds2418;Name=YP_002403564.1;Parent=gene2592;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pc :  carrier;Dbxref=Genbank:YP_002403564.1,GeneID:7147281;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403564.1;transl_table=11
NC_011748.1	RefSeq	gene	2616233	2616775	.	-	.	ID=gene2593;Name=yfcD;Dbxref=GeneID:7148707;gbkey=Gene;gene=yfcD;locus_tag=EC55989_2543
NC_011748.1	RefSeq	CDS	2616233	2616775	.	-	0	ID=cds2419;Name=YP_002403565.1;Parent=gene2593;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 16430214%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002403565.1,GeneID:7148707;gbkey=CDS;product=NUDIX hydrolase;protein_id=YP_002403565.1;transl_table=11
NC_011748.1	RefSeq	gene	2616833	2617387	.	-	.	ID=gene2594;Name=yfcE;Dbxref=GeneID:7148708;gbkey=Gene;gene=yfcE;locus_tag=EC55989_2544
NC_011748.1	RefSeq	CDS	2616833	2617387	.	-	0	ID=cds2420;Name=YP_002403566.1;Parent=gene2594;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002403566.1,GeneID:7148708;gbkey=CDS;product=phosphodiesterase;protein_id=YP_002403566.1;transl_table=11
NC_011748.1	RefSeq	gene	2617440	2618084	.	-	.	ID=gene2595;Name=yfcF;Dbxref=GeneID:7148709;gbkey=Gene;gene=yfcF;locus_tag=EC55989_2545
NC_011748.1	RefSeq	CDS	2617440	2618084	.	-	0	ID=cds2421;Name=YP_002403567.1;Parent=gene2595;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002403567.1,GeneID:7148709;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403567.1;transl_table=11
NC_011748.1	RefSeq	gene	2618220	2618867	.	+	.	ID=gene2596;Name=yfcG;Dbxref=GeneID:7148710;gbkey=Gene;gene=yfcG;locus_tag=EC55989_2546
NC_011748.1	RefSeq	CDS	2618220	2618867	.	+	0	ID=cds2422;Name=YP_002403568.1;Parent=gene2596;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002403568.1,GeneID:7148710;gbkey=CDS;product=glutathione S-transferase;protein_id=YP_002403568.1;transl_table=11
NC_011748.1	RefSeq	gene	2618924	2619286	.	+	.	ID=gene2597;Name=folX;Dbxref=GeneID:7148711;gbkey=Gene;gene=folX;locus_tag=EC55989_2547
NC_011748.1	RefSeq	CDS	2618924	2619286	.	+	0	ID=cds2423;Name=YP_002403569.1;Parent=gene2597;Note=catalyzes the formation of dihydromonapterin triphosphate from dihydroneopterin triphosphate;Dbxref=Genbank:YP_002403569.1,GeneID:7148711;gbkey=CDS;product=D-erythro-7%2C8-dihydroneopterin triphosphate 2%27-epimerase;protein_id=YP_002403569.1;transl_table=11
NC_011748.1	RefSeq	gene	2619307	2620200	.	+	.	ID=gene2598;Name=yfcH;Dbxref=GeneID:7146176;gbkey=Gene;gene=yfcH;locus_tag=EC55989_2548
NC_011748.1	RefSeq	CDS	2619307	2620200	.	+	0	ID=cds2424;Name=YP_002403570.1;Parent=gene2598;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002403570.1,GeneID:7146176;gbkey=CDS;product=NAD%28P%29-binding Rossmann-fold domain;protein_id=YP_002403570.1;transl_table=11
NC_011748.1	RefSeq	gene	2620248	2621150	.	-	.	ID=gene2599;Name=yfcI;Dbxref=GeneID:7148712;gbkey=Gene;gene=yfcI;locus_tag=EC55989_2549
NC_011748.1	RefSeq	CDS	2620248	2621150	.	-	0	ID=cds2425;Name=YP_002403571.1;Parent=gene2599;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002403571.1,GeneID:7148712;gbkey=CDS;product=transposase;protein_id=YP_002403571.1;transl_table=11
NC_011748.1	RefSeq	gene	2621347	2622120	.	-	.	ID=gene2600;Name=hisP;Dbxref=GeneID:7148713;gbkey=Gene;gene=hisP;locus_tag=EC55989_2550
NC_011748.1	RefSeq	CDS	2621347	2622120	.	-	0	ID=cds2426;Name=YP_002403572.1;Parent=gene2600;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 10373434%2C 3313284%2C 91060556%3B Product type t : transporter;Dbxref=Genbank:YP_002403572.1,GeneID:7148713;gbkey=CDS;product=histidine%2Flysine%2Farginine%2Fornithine transporter subunit;protein_id=YP_002403572.1;transl_table=11
NC_011748.1	RefSeq	gene	2622128	2622844	.	-	.	ID=gene2601;Name=hisM;Dbxref=GeneID:7146441;gbkey=Gene;gene=hisM;locus_tag=EC55989_2551
NC_011748.1	RefSeq	CDS	2622128	2622844	.	-	0	ID=cds2427;Name=YP_002403573.1;Parent=gene2601;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 10373434%2C 3313284%3B Product type t : transporter;Dbxref=Genbank:YP_002403573.1,GeneID:7146441;gbkey=CDS;product=histidine%2Flysine%2Farginine%2Fornithine transporter subunit %3B membrane component of ABC superfamily;protein_id=YP_002403573.1;transl_table=11
NC_011748.1	RefSeq	gene	2622841	2623527	.	-	.	ID=gene2602;Name=hisQ;Dbxref=GeneID:7146440;gbkey=Gene;gene=hisQ;locus_tag=EC55989_2552
NC_011748.1	RefSeq	CDS	2622841	2623527	.	-	0	ID=cds2428;Name=YP_002403574.1;Parent=gene2602;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 10373434%3B Product type t : transporter;Dbxref=Genbank:YP_002403574.1,GeneID:7146440;gbkey=CDS;product=histidine%2Flysine%2Farginine%2Fornithine transporter subunit %3B membrane component of ABC superfamily;protein_id=YP_002403574.1;transl_table=11
NC_011748.1	RefSeq	gene	2623617	2624399	.	-	.	ID=gene2603;Name=hisJ;Dbxref=GeneID:7146442;gbkey=Gene;gene=hisJ;locus_tag=EC55989_2553
NC_011748.1	RefSeq	CDS	2623617	2624399	.	-	0	ID=cds2429;Name=YP_002403575.1;Parent=gene2603;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 10373434%2C 6449635%2C 8161536%2C 9298646%2C 9600841%2C 9740056%3B Product type t : transporter;Dbxref=Genbank:YP_002403575.1,GeneID:7146442;gbkey=CDS;product=histidine%2Flysine%2Farginine%2Fornithine transporter subunit %3B periplasmic-binding component of ABC superfamily;protein_id=YP_002403575.1;transl_table=11
NC_011748.1	RefSeq	gene	2624620	2625402	.	-	.	ID=gene2604;Name=argT;Dbxref=GeneID:7146438;gbkey=Gene;gene=argT;locus_tag=EC55989_2554
NC_011748.1	RefSeq	CDS	2624620	2625402	.	-	0	ID=cds2430;Name=YP_002403576.1;Parent=gene2604;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 4583243%2C 87308226%2C 3040734%2C 9298646%3B Product type t : transporter;Dbxref=Genbank:YP_002403576.1,GeneID:7146438;gbkey=CDS;product=lysine%2Farginine%2Fornithine transporter subunit %3B periplasmic-binding component of ABC superfamily;protein_id=YP_002403576.1;transl_table=11
NC_011748.1	RefSeq	gene	2625668	2626237	.	-	.	ID=gene2605;Name=ubiX;Dbxref=GeneID:7145537;gbkey=Gene;gene=ubiX;locus_tag=EC55989_2555
NC_011748.1	RefSeq	CDS	2625668	2626237	.	-	0	ID=cds2431;Name=YP_002403577.1;Parent=gene2605;Note=catalyzes the formation of 2-octaprenylphenol from 3-octaprenyl-4-hydroxybenzoate;Dbxref=Genbank:YP_002403577.1,GeneID:7145537;gbkey=CDS;product=3-octaprenyl-4-hydroxybenzoate carboxy-lyase;protein_id=YP_002403577.1;transl_table=11
NC_011748.1	RefSeq	gene	2626332	2627849	.	-	.	ID=gene2606;Name=purF;Dbxref=GeneID:7147895;gbkey=Gene;gene=purF;locus_tag=EC55989_2556
NC_011748.1	RefSeq	CDS	2626332	2627849	.	-	0	ID=cds2432;Name=YP_002403578.1;Parent=gene2606;Note=Catalyzes first step of the de novo purine nucleotide biosynthetic pathway;Dbxref=Genbank:YP_002403578.1,GeneID:7147895;gbkey=CDS;product=amidophosphoribosyltransferase;protein_id=YP_002403578.1;transl_table=11
NC_011748.1	RefSeq	gene	2627886	2628374	.	-	.	ID=gene2607;Name=cvpA;Dbxref=GeneID:7147297;gbkey=Gene;gene=cvpA;locus_tag=EC55989_2557
NC_011748.1	RefSeq	CDS	2627886	2628374	.	-	0	ID=cds2433;Name=YP_002403579.1;Parent=gene2607;Note=membrane protein required for colicin V production;Dbxref=Genbank:YP_002403579.1,GeneID:7147297;gbkey=CDS;product=colicin V production protein;protein_id=YP_002403579.1;transl_table=11
NC_011748.1	RefSeq	gene	2628633	2629295	.	-	.	ID=gene2608;Name=dedD;Dbxref=GeneID:7145800;gbkey=Gene;gene=dedD;locus_tag=EC55989_2558
NC_011748.1	RefSeq	CDS	2628633	2629295	.	-	0	ID=cds2434;Name=YP_002403580.1;Parent=gene2608;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 3040734;Dbxref=Genbank:YP_002403580.1,GeneID:7145800;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403580.1;transl_table=11
NC_011748.1	RefSeq	gene	2629285	2630553	.	-	.	ID=gene2609;Name=folC;Dbxref=GeneID:7145877;gbkey=Gene;gene=folC;locus_tag=EC55989_2559
NC_011748.1	RefSeq	CDS	2629285	2630553	.	-	0	ID=cds2435;Name=YP_002403581.1;Parent=gene2609;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 3040739%2C 91112811%2C 92041808%2C 1989505%2C 3040734%3B Product type e : enzyme;Dbxref=Genbank:YP_002403581.1,GeneID:7145877;gbkey=CDS;product=bifunctional folylpolyglutamate synthase%2F dihydrofolate synthase;protein_id=YP_002403581.1;transl_table=11
NC_011748.1	RefSeq	gene	2630623	2631537	.	-	.	ID=gene2610;Name=accD;Dbxref=GeneID:7146170;gbkey=Gene;gene=accD;locus_tag=EC55989_2560
NC_011748.1	RefSeq	CDS	2630623	2631537	.	-	0	ID=cds2436;Name=YP_002403582.1;Parent=gene2610;Note=catalyzes the carboxylation of acetyl-CoA to malonyl-CoA%3B forms a tetramer of AccA2D2 subunits;Dbxref=Genbank:YP_002403582.1,GeneID:7146170;gbkey=CDS;product=acetyl-CoA carboxylase subunit beta;protein_id=YP_002403582.1;transl_table=11
NC_011748.1	RefSeq	gene	2631693	2632352	.	-	.	ID=gene2611;Name=dedA;Dbxref=GeneID:7145431;gbkey=Gene;gene=dedA;locus_tag=EC55989_2561
NC_011748.1	RefSeq	CDS	2631693	2632352	.	-	0	ID=cds2437;Name=YP_002403583.1;Parent=gene2611;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 3029016%2C 3040734%2C 7678242%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002403583.1,GeneID:7145431;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403583.1;transl_table=11
NC_011748.1	RefSeq	gene	2632435	2633247	.	-	.	ID=gene2612;Name=truA;Dbxref=GeneID:7145876;gbkey=Gene;gene=truA;locus_tag=EC55989_2562
NC_011748.1	RefSeq	CDS	2632435	2633247	.	-	0	ID=cds2438;Name=YP_002403584.1;Parent=gene2612;Note=mediates pseudouridylation %28positions 38%2C 39%2C 40%29 at the tRNA anticodon region which contributes to the structural stability;Dbxref=Genbank:YP_002403584.1,GeneID:7145876;gbkey=CDS;product=tRNA pseudouridine synthase A;protein_id=YP_002403584.1;transl_table=11
NC_011748.1	RefSeq	gene	2633247	2634260	.	-	.	ID=gene2613;Name=usg;Dbxref=GeneID:7147858;gbkey=Gene;gene=usg;locus_tag=EC55989_2563
NC_011748.1	RefSeq	CDS	2633247	2634260	.	-	0	ID=cds2439;Name=YP_002403585.1;Parent=gene2613;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 92380957%2C 92380982%2C 93123150%2C 2681152%2C 2991861%2C 3029016%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002403585.1,GeneID:7147858;gbkey=CDS;product=semialdehyde dehydrogenase;protein_id=YP_002403585.1;transl_table=11
NC_011748.1	RefSeq	gene	2634326	2635462	.	-	.	ID=gene2614;Name=pdxB;Dbxref=GeneID:7147926;gbkey=Gene;gene=pdxB;locus_tag=EC55989_2564
NC_011748.1	RefSeq	CDS	2634326	2635462	.	-	0	ID=cds2440;Name=YP_002403586.1;Parent=gene2614;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 90036695%2C 91035267%2C 2681152%2C 2991861%2C 3029016%3B Product type e : enzyme;Dbxref=Genbank:YP_002403586.1,GeneID:7147926;gbkey=CDS;product=erythronate-4-phosphate dehydrogenase;protein_id=YP_002403586.1;transl_table=11
NC_011748.1	RefSeq	gene	2635561	2636556	.	+	.	ID=gene2615;Name=flk;Dbxref=GeneID:7147125;gbkey=Gene;gene=flk;locus_tag=EC55989_2565
NC_011748.1	RefSeq	CDS	2635561	2636556	.	+	0	ID=cds2441;Name=YP_002403587.1;Parent=gene2615;Note=in Salmonella typhimurium Flk regulates flagellar biosynthesis by inhibition of the flagellar-associated type III secretion system%3B lowers secretion levels of the anti-sigma28 factor FlgM to the periplasm%3B inner membrane-anchored protein;Dbxref=Genbank:YP_002403587.1,GeneID:7147125;gbkey=CDS;product=flagella biosynthesis regulator;protein_id=YP_002403587.1;transl_table=11
NC_011748.1	RefSeq	gene	2636553	2637731	.	-	.	ID=gene2616;Name=yfcJ;Dbxref=GeneID:7146162;gbkey=Gene;gene=yfcJ;locus_tag=EC55989_2566
NC_011748.1	RefSeq	CDS	2636553	2637731	.	-	0	ID=cds2442;Name=YP_002403588.1;Parent=gene2616;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002403588.1,GeneID:7146162;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403588.1;transl_table=11
NC_011748.1	RefSeq	gene	2638024	2639244	.	-	.	ID=gene2617;Name=fabB;Dbxref=GeneID:7148714;gbkey=Gene;gene=fabB;locus_tag=EC55989_2567
NC_011748.1	RefSeq	CDS	2638024	2639244	.	-	0	ID=cds2443;Name=YP_002403589.1;Parent=gene2617;Note=FabB%2C beta-Ketoacyl-ACP synthase I%2C KASI%3B catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP%3B required for the elongation of short-chain unsaturated acyl-ACP;Dbxref=Genbank:YP_002403589.1,GeneID:7148714;gbkey=CDS;product=3-oxoacyl-ACP synthase;protein_id=YP_002403589.1;transl_table=11
NC_011748.1	RefSeq	gene	2639403	2641409	.	+	.	ID=gene2618;Name=mnmC;Dbxref=GeneID:7146047;gbkey=Gene;gene=mnmC;locus_tag=EC55989_2568
NC_011748.1	RefSeq	CDS	2639403	2641409	.	+	0	ID=cds2444;Name=YP_002403590.1;Parent=gene2618;Note=catalyzes the formation of 5-methylaminomethyl-2-thiouridine in position 34 of the anticodon of tRNA molecules;Dbxref=Genbank:YP_002403590.1,GeneID:7146047;gbkey=CDS;product=5-methylaminomethyl-2-thiouridine methyltransferase;protein_id=YP_002403590.1;transl_table=11
NC_011748.1	RefSeq	gene	2641530	2641808	.	-	.	ID=gene2619;Name=yfcL;Dbxref=GeneID:7147845;gbkey=Gene;gene=yfcL;locus_tag=EC55989_2569
NC_011748.1	RefSeq	CDS	2641530	2641808	.	-	0	ID=cds2445;Name=YP_002403591.1;Parent=gene2619;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403591.1,GeneID:7147845;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403591.1;transl_table=11
NC_011748.1	RefSeq	gene	2641842	2642390	.	-	.	ID=gene2620;Name=yfcM;Dbxref=GeneID:7148715;gbkey=Gene;gene=yfcM;locus_tag=EC55989_2570
NC_011748.1	RefSeq	CDS	2641842	2642390	.	-	0	ID=cds2446;Name=YP_002403592.1;Parent=gene2620;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403592.1,GeneID:7148715;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403592.1;transl_table=11
NC_011748.1	RefSeq	gene	2642390	2643199	.	-	.	ID=gene2621;Name=yfcA;Dbxref=GeneID:7148716;gbkey=Gene;gene=yfcA;locus_tag=EC55989_2571
NC_011748.1	RefSeq	CDS	2642390	2643199	.	-	0	ID=cds2447;Name=YP_002403593.1;Parent=gene2621;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002403593.1,GeneID:7148716;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403593.1;transl_table=11
NC_011748.1	RefSeq	gene	2643199	2644023	.	-	.	ID=gene2622;Name=mepA;Dbxref=GeneID:7148706;gbkey=Gene;gene=mepA;locus_tag=EC55989_2572
NC_011748.1	RefSeq	CDS	2643199	2644023	.	-	0	ID=cds2448;Name=YP_002403594.1;Parent=gene2622;Note=D-alanyl-D-alanine endopeptidase%3B functions in hydrolyzing cell wall peptidoglycan%3B similar to LAS metallopeptidases%3B forms a dimer in periplasm;Dbxref=Genbank:YP_002403594.1,GeneID:7148706;gbkey=CDS;product=penicillin-insensitive murein endopeptidase;protein_id=YP_002403594.1;transl_table=11
NC_011748.1	RefSeq	gene	2644027	2645112	.	-	.	ID=gene2623;Name=aroC;Dbxref=GeneID:7146823;gbkey=Gene;gene=aroC;locus_tag=EC55989_2573
NC_011748.1	RefSeq	CDS	2644027	2645112	.	-	0	ID=cds2449;Name=YP_002403595.1;Parent=gene2623;Note=catalyzes the formation of chorismate from 5-O-%281-carboxyvinyl%29-3-phosphoshikimate in aromatic amino acid biosynthesis;Dbxref=Genbank:YP_002403595.1,GeneID:7146823;gbkey=CDS;product=chorismate synthase;protein_id=YP_002403595.1;transl_table=11
NC_011748.1	RefSeq	gene	2645147	2646079	.	-	.	ID=gene2624;Name=prmB;Dbxref=GeneID:7145541;gbkey=Gene;gene=prmB;locus_tag=EC55989_2574
NC_011748.1	RefSeq	CDS	2645147	2646079	.	-	0	ID=cds2450;Name=YP_002403596.1;Parent=gene2624;Note=involved in methylation of ribosomal protein L3;Dbxref=Genbank:YP_002403596.1,GeneID:7145541;gbkey=CDS;product=N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase;protein_id=YP_002403596.1;transl_table=11
NC_011748.1	RefSeq	gene	2646245	2646796	.	+	.	ID=gene2625;Name=yfcN;Dbxref=GeneID:7147250;gbkey=Gene;gene=yfcN;locus_tag=EC55989_2575
NC_011748.1	RefSeq	CDS	2646245	2646796	.	+	0	ID=cds2451;Name=YP_002403597.1;Parent=gene2625;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403597.1,GeneID:7147250;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403597.1;transl_table=11
NC_011748.1	RefSeq	gene	2646990	2647970	.	-	.	ID=gene2626;Name=EC55989_2576;Dbxref=GeneID:7148717;gbkey=Gene;locus_tag=EC55989_2576
NC_011748.1	RefSeq	CDS	2646990	2647970	.	-	0	ID=cds2452;Name=YP_002403598.1;Parent=gene2626;Note=Evidence 2b : Function of strongly homologous gene%3B Product type e : enzyme;Dbxref=Genbank:YP_002403598.1,GeneID:7148717;gbkey=CDS;product=transposase%2C IS110 family;protein_id=YP_002403598.1;transl_table=11
NC_011748.1	RefSeq	gene	2648197	2649069	.	-	.	ID=gene2627;Name=EC55989_2577;Dbxref=GeneID:7144776;gbkey=Gene;locus_tag=EC55989_2577
NC_011748.1	RefSeq	CDS	2648197	2649069	.	-	0	ID=cds2453;Name=YP_002403599.1;Parent=gene2627;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403599.1,GeneID:7144776;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403599.1;transl_table=11
NC_011748.1	RefSeq	gene	2649056	2649580	.	-	.	ID=gene2628;Name=EC55989_2578;Dbxref=GeneID:7144777;gbkey=Gene;locus_tag=EC55989_2578
NC_011748.1	RefSeq	CDS	2649056	2649580	.	-	0	ID=cds2454;Name=YP_002403600.1;Parent=gene2628;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type ps :  structure;Dbxref=Genbank:YP_002403600.1,GeneID:7144777;gbkey=CDS;product=fimbrial protein %28Adhesin%29;protein_id=YP_002403600.1;transl_table=11
NC_011748.1	RefSeq	gene	2649577	2650047	.	-	.	ID=gene2629;Name=EC55989_2579;Dbxref=GeneID:7144778;gbkey=Gene;locus_tag=EC55989_2579
NC_011748.1	RefSeq	CDS	2649577	2650047	.	-	0	ID=cds2455;Name=YP_002403601.1;Parent=gene2629;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type ps :  structure;Dbxref=Genbank:YP_002403601.1,GeneID:7144778;gbkey=CDS;product=fimbrial protein;protein_id=YP_002403601.1;transl_table=11
NC_011748.1	RefSeq	gene	2650044	2650658	.	-	.	ID=gene2630;Name=EC55989_2580;Dbxref=GeneID:7144779;gbkey=Gene;locus_tag=EC55989_2580
NC_011748.1	RefSeq	CDS	2650044	2650658	.	-	0	ID=cds2456;Name=YP_002403602.1;Parent=gene2630;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type ps :  structure;Dbxref=Genbank:YP_002403602.1,GeneID:7144779;gbkey=CDS;product=minor fimbrial subunit;protein_id=YP_002403602.1;transl_table=11
NC_011748.1	RefSeq	gene	2650567	2651319	.	-	.	ID=gene2631;Name=yfcS;Dbxref=GeneID:7144780;gbkey=Gene;gene=yfcS;locus_tag=EC55989_2581
NC_011748.1	RefSeq	CDS	2650567	2651319	.	-	0	ID=cds2457;Name=YP_002403603.1;Parent=gene2631;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pf :  factor;Dbxref=Genbank:YP_002403603.1,GeneID:7144780;gbkey=CDS;product=periplasmic pilus chaperone;protein_id=YP_002403603.1;transl_table=11
NC_011748.1	RefSeq	gene	2651339	2653981	.	-	.	ID=gene2632;Name=EC55989_2582;Dbxref=GeneID:7148718;gbkey=Gene;locus_tag=EC55989_2582
NC_011748.1	RefSeq	CDS	2651339	2653981	.	-	0	ID=cds2458;Name=YP_002403604.1;Parent=gene2632;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002403604.1,GeneID:7148718;gbkey=CDS;product=outer membrane usher protein yfcU precursor;protein_id=YP_002403604.1;transl_table=11
NC_011748.1	RefSeq	gene	2654063	2654626	.	-	.	ID=gene2633;Name=yfcV;Dbxref=GeneID:7144781;gbkey=Gene;gene=yfcV;locus_tag=EC55989_2583
NC_011748.1	RefSeq	CDS	2654063	2654626	.	-	0	ID=cds2459;Name=YP_002403605.1;Parent=gene2633;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type ps :  structure;Dbxref=Genbank:YP_002403605.1,GeneID:7144781;gbkey=CDS;product=fimbrial-like adhesin protein;protein_id=YP_002403605.1;transl_table=11
NC_011748.1	RefSeq	gene	2655301	2655786	.	-	.	ID=gene2634;Name=sixA;Dbxref=GeneID:7148719;gbkey=Gene;gene=sixA;locus_tag=EC55989_2584
NC_011748.1	RefSeq	CDS	2655301	2655786	.	-	0	ID=cds2460;Name=YP_002403606.1;Parent=gene2634;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 10089421%2C 20200300%2C 9489669%3B Product type e : enzyme;Dbxref=Genbank:YP_002403606.1,GeneID:7148719;gbkey=CDS;product=phosphohistidine phosphatase;protein_id=YP_002403606.1;transl_table=11
NC_011748.1	RefSeq	gene	2655989	2658133	.	-	.	ID=gene2635;Name=fadJ;Dbxref=GeneID:7147659;gbkey=Gene;gene=fadJ;locus_tag=EC55989_2585
NC_011748.1	RefSeq	CDS	2655989	2658133	.	-	0	ID=cds2461;Name=YP_002403607.1;Parent=gene2635;Note=multifunctional enoyl-CoA hydratase%2F3-hydroxyacyl-CoA dehydrogenase%2F3-hydroxybutyryl-CoA epimerase%3B catalyzes the formation of an hydroxyacyl-CoA by addition of water on enoyl-CoA%3B exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities: forms a heterotetramer with FadI%3B similar to FadA2B2 complex%3B involved in the anaerobic degradation of long and medium-chain fatty acids in the presence of nitrate;Dbxref=Genbank:YP_002403607.1,GeneID:7147659;gbkey=CDS;product=multifunctional fatty acid oxidation complex subunit alpha;protein_id=YP_002403607.1;transl_table=11
NC_011748.1	RefSeq	gene	2658133	2659443	.	-	.	ID=gene2636;Name=fadI;Dbxref=GeneID:7148720;gbkey=Gene;gene=fadI;locus_tag=EC55989_2586
NC_011748.1	RefSeq	CDS	2658133	2659443	.	-	0	ID=cds2462;Name=YP_002403608.1;Parent=gene2636;Note=FadI%3B fatty acid oxidation complex component beta%3B functions in a heterotetramer with FadJ%3B similar to FadA2B2 complex%3B functions in beta-oxidation of fatty acids during anaerobic growth;Dbxref=Genbank:YP_002403608.1,GeneID:7148720;gbkey=CDS;product=3-ketoacyl-CoA thiolase;protein_id=YP_002403608.1;transl_table=11
NC_011748.1	RefSeq	gene	2659623	2659907	.	-	.	ID=gene2637;Name=yfcZ;Dbxref=GeneID:7148721;gbkey=Gene;gene=yfcZ;locus_tag=EC55989_2587
NC_011748.1	RefSeq	CDS	2659623	2659907	.	-	0	ID=cds2463;Name=YP_002403609.1;Parent=gene2637;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403609.1,GeneID:7148721;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403609.1;transl_table=11
NC_011748.1	RefSeq	gene	2660273	2661619	.	+	.	ID=gene2638;Name=fadL;Dbxref=GeneID:7148722;gbkey=Gene;gene=fadL;locus_tag=EC55989_2588
NC_011748.1	RefSeq	CDS	2660273	2661619	.	+	0	ID=cds2464;Name=YP_002403610.1;Parent=gene2638;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 15178802%2C 2840553%2C 3286621%2C 91100327%2C 1987139%2C 9119048%3B Product type t : transporter;Dbxref=Genbank:YP_002403610.1,GeneID:7148722;gbkey=CDS;product=long-chain fatty acid outer membrane transporter;protein_id=YP_002403610.1;transl_table=11
NC_011748.1	RefSeq	gene	2661985	2663043	.	+	.	ID=gene2639;Name=yfdF;Dbxref=GeneID:7146060;gbkey=Gene;gene=yfdF;locus_tag=EC55989_2589
NC_011748.1	RefSeq	CDS	2661985	2663043	.	+	0	ID=cds2465;Name=YP_002403611.1;Parent=gene2639;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403611.1,GeneID:7146060;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403611.1;transl_table=11
NC_011748.1	RefSeq	gene	2663225	2663980	.	-	.	ID=gene2640;Name=vacJ;Dbxref=GeneID:7148725;gbkey=Gene;gene=vacJ;locus_tag=EC55989_2590
NC_011748.1	RefSeq	CDS	2663225	2663980	.	-	0	ID=cds2466;Name=YP_002403612.1;Parent=gene2640;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 8145644%2C 15352239%3B Product type lp : lipoprotein;Dbxref=Genbank:YP_002403612.1,GeneID:7148725;gbkey=CDS;product=lipoprotein;protein_id=YP_002403612.1;transl_table=11
NC_011748.1	RefSeq	gene	2664006	2664176	.	-	.	ID=gene2641;Name=EC55989_2591;Dbxref=GeneID:7147945;gbkey=Gene;locus_tag=EC55989_2591
NC_011748.1	RefSeq	CDS	2664006	2664176	.	-	0	ID=cds2467;Name=YP_002403613.1;Parent=gene2641;Note=Evidence 6 : Doubtful CDS;Dbxref=Genbank:YP_002403613.1,GeneID:7147945;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403613.1;transl_table=11
NC_011748.1	RefSeq	gene	2664274	2665206	.	+	.	ID=gene2642;Name=yfdC;Dbxref=GeneID:7144782;gbkey=Gene;gene=yfdC;locus_tag=EC55989_2592
NC_011748.1	RefSeq	CDS	2664274	2665206	.	+	0	ID=cds2468;Name=YP_002403614.1;Parent=gene2642;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002403614.1,GeneID:7144782;gbkey=CDS;product=inner membrane protein;protein_id=YP_002403614.1;transl_table=11
NC_011748.1	RefSeq	gene	2665282	2665356	.	+	.	ID=gene2643;Name=EC55989_tRNA26;Dbxref=GeneID:7148723;gbkey=Gene;locus_tag=EC55989_tRNA26
NC_011748.1	RefSeq	tRNA	2665282	2665356	.	+	.	ID=rna99;Dbxref=GeneID:7148723;gbkey=tRNA;product=tRNA-Arg
NC_011748.1	RefSeq	exon	2665282	2665356	.	+	.	ID=id201;Parent=rna99;Dbxref=GeneID:7148723;gbkey=tRNA;product=tRNA-Arg
NC_011748.1	RefSeq	gene	2665518	2666675	.	+	.	ID=gene2644;Name=intS;Dbxref=GeneID:7145335;gbkey=Gene;gene=intS;locus_tag=EC55989_2593
NC_011748.1	RefSeq	CDS	2665518	2666675	.	+	0	ID=cds2469;Name=YP_002403615.1;Parent=gene2644;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002403615.1,GeneID:7145335;gbkey=CDS;product=prophage CPS-53 integrase%3B CPS-53 %28KpLE1%29 prophage;protein_id=YP_002403615.1;transl_table=11
NC_011748.1	RefSeq	gene	2666884	2668806	.	+	.	ID=gene2645;Name=EC55989_2594;Dbxref=GeneID:7146610;gbkey=Gene;locus_tag=EC55989_2594
NC_011748.1	RefSeq	CDS	2666884	2668806	.	+	0	ID=cds2470;Name=YP_002403616.1;Parent=gene2645;Note=Evidence 5 : No homology to any previously reported sequences%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002403616.1,GeneID:7146610;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403616.1;transl_table=11
NC_011748.1	RefSeq	gene	2668877	2670856	.	-	.	ID=gene2646;Name=EC55989_2595;Dbxref=GeneID:7144783;gbkey=Gene;locus_tag=EC55989_2595
NC_011748.1	RefSeq	CDS	2668877	2670856	.	-	0	ID=cds2471;Name=YP_002403617.1;Parent=gene2646;Note=Evidence 5 : No homology to any previously reported sequences%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002403617.1,GeneID:7144783;gbkey=CDS;product=hypothetical protein%3B head-binding domain;protein_id=YP_002403617.1;transl_table=11
NC_011748.1	RefSeq	gene	2670908	2671246	.	+	.	ID=gene2647;Name=EC55989_2596;Dbxref=GeneID:7144784;gbkey=Gene;locus_tag=EC55989_2596
NC_011748.1	RefSeq	CDS	2670908	2671246	.	+	0	ID=cds2472;Name=YP_002403618.1;Parent=gene2647;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002403618.1,GeneID:7144784;gbkey=CDS;product=regulatory protein mnt %28modular protein%29;protein_id=YP_002403618.1;transl_table=11
NC_011748.1	RefSeq	gene	2671482	2672261	.	-	.	ID=gene2648;Name=EC55989_2597;Dbxref=GeneID:7144785;gbkey=Gene;locus_tag=EC55989_2597
NC_011748.1	RefSeq	CDS	2671482	2672261	.	-	0	ID=cds2473;Name=YP_002403619.1;Parent=gene2648;Note=Evidence 5 : No homology to any previously reported sequences%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002403619.1,GeneID:7144785;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403619.1;transl_table=11
NC_011748.1	RefSeq	gene	2672299	2673009	.	-	.	ID=gene2649;Name=EC55989_2598;Dbxref=GeneID:7144786;gbkey=Gene;locus_tag=EC55989_2598
NC_011748.1	RefSeq	CDS	2672299	2673009	.	-	0	ID=cds2474;Name=YP_002403620.1;Parent=gene2649;Note=Evidence 5 : No homology to any previously reported sequences%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002403620.1,GeneID:7144786;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403620.1;transl_table=11
NC_011748.1	RefSeq	gene	2672999	2673187	.	-	.	ID=gene2650;Name=EC55989_2599;Dbxref=GeneID:7144787;gbkey=Gene;locus_tag=EC55989_2599
NC_011748.1	RefSeq	CDS	2672999	2673187	.	-	0	ID=cds2475;Name=YP_002403621.1;Parent=gene2650;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002403621.1,GeneID:7144787;gbkey=CDS;product=transcriptional repressor arc %28modular protein%29;protein_id=YP_002403621.1;transl_table=11
NC_011748.1	RefSeq	gene	2673284	2673604	.	+	.	ID=gene2651;Name=EC55989_2600;Dbxref=GeneID:7144788;gbkey=Gene;locus_tag=EC55989_2600
NC_011748.1	RefSeq	CDS	2673284	2673604	.	+	0	ID=cds2476;Name=YP_002403622.1;Parent=gene2651;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002403622.1,GeneID:7144788;gbkey=CDS;product=regulator protein%3B Arc-like DNA binding domain;protein_id=YP_002403622.1;transl_table=11
NC_011748.1	RefSeq	gene	2673688	2673882	.	+	.	ID=gene2652;Name=EC55989_2601;Dbxref=GeneID:7144789;gbkey=Gene;locus_tag=EC55989_2601
NC_011748.1	RefSeq	CDS	2673688	2673882	.	+	0	ID=cds2477;Name=YP_002403623.1;Parent=gene2652;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002403623.1,GeneID:7144789;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403623.1;transl_table=11
NC_011748.1	RefSeq	gene	2673896	2674261	.	-	.	ID=gene2653;Name=EC55989_2602;Dbxref=GeneID:7144790;gbkey=Gene;locus_tag=EC55989_2602
NC_011748.1	RefSeq	CDS	2673896	2674261	.	-	0	ID=cds2478;Name=YP_002403624.1;Parent=gene2653;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002403624.1,GeneID:7144790;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403624.1;transl_table=11
NC_011748.1	RefSeq	gene	2674516	2676639	.	-	.	ID=gene2654;Name=EC55989_2603;Dbxref=GeneID:7144791;gbkey=Gene;locus_tag=EC55989_2603;pseudo=true
NC_011748.1	RefSeq	region	2674516	2676639	.	-	.	ID=id202;Note=DNA transfer protein %28fragment%29%3BEvidence 7 : Gene remnant%3B Product type h : extrachromosomal origin;Dbxref=GeneID:7144791;gbkey=misc_feature
NC_011748.1	RefSeq	gene	2676624	2677967	.	-	.	ID=gene2655;Name=gp;Dbxref=GeneID:7144792;gbkey=Gene;gene=gp;locus_tag=EC55989_2604
NC_011748.1	RefSeq	CDS	2676624	2677967	.	-	0	ID=cds2479;Name=YP_002403625.1;Parent=gene2655;Note=Evidence 2b : Function of strongly homologous gene%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002403625.1,GeneID:7144792;gbkey=CDS;product=DNA transfer protein gp20;protein_id=YP_002403625.1;transl_table=11
NC_011748.1	RefSeq	gene	2677978	2678670	.	-	.	ID=gene2656;Name=EC55989_2605;Dbxref=GeneID:7146357;gbkey=Gene;locus_tag=EC55989_2605
NC_011748.1	RefSeq	CDS	2677978	2678670	.	-	0	ID=cds2480;Name=YP_002403626.1;Parent=gene2656;Note=Evidence 2b : Function of strongly homologous gene%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002403626.1,GeneID:7146357;gbkey=CDS;product=DNA transfer protein;protein_id=YP_002403626.1;transl_table=11
NC_011748.1	RefSeq	gene	2678673	2679131	.	-	.	ID=gene2657;Name=EC55989_2606;Dbxref=GeneID:7144793;gbkey=Gene;locus_tag=EC55989_2606
NC_011748.1	RefSeq	CDS	2678673	2679131	.	-	0	ID=cds2481;Name=YP_002403627.1;Parent=gene2657;Note=Evidence 2b : Function of strongly homologous gene%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002403627.1,GeneID:7144793;gbkey=CDS;product=Head assembly protein;protein_id=YP_002403627.1;transl_table=11
NC_011748.1	RefSeq	gene	2679128	2679976	.	-	.	ID=gene2658;Name=GP;Dbxref=GeneID:7144794;gbkey=Gene;gene=GP;locus_tag=EC55989_2607
NC_011748.1	RefSeq	CDS	2679128	2679976	.	-	0	ID=cds2482;Name=YP_002403628.1;Parent=gene2658;Note=Evidence 2b : Function of strongly homologous gene%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002403628.1,GeneID:7144794;gbkey=CDS;product=Packaged DNA stabilization protein gp26;protein_id=YP_002403628.1;transl_table=11
NC_011748.1	RefSeq	gene	2679976	2681394	.	-	.	ID=gene2659;Name=EC55989_2608;Dbxref=GeneID:7146358;gbkey=Gene;locus_tag=EC55989_2608
NC_011748.1	RefSeq	CDS	2679976	2681394	.	-	0	ID=cds2483;Name=YP_002403629.1;Parent=gene2659;Note=Evidence 2b : Function of strongly homologous gene%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002403629.1,GeneID:7146358;gbkey=CDS;product=Packaged DNA stabilization protein from phage;protein_id=YP_002403629.1;transl_table=11
NC_011748.1	RefSeq	gene	2681403	2681885	.	-	.	ID=gene2660;Name=EC55989_2609;Dbxref=GeneID:7144795;gbkey=Gene;locus_tag=EC55989_2609
NC_011748.1	RefSeq	CDS	2681403	2681885	.	-	0	ID=cds2484;Name=YP_002403630.1;Parent=gene2660;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002403630.1,GeneID:7144795;gbkey=CDS;product=packaged DNA stabilization protein p27;protein_id=YP_002403630.1;transl_table=11
NC_011748.1	RefSeq	gene	2681860	2682045	.	-	.	ID=gene2661;Name=EC55989_2610;Dbxref=GeneID:7144796;gbkey=Gene;locus_tag=EC55989_2610
NC_011748.1	RefSeq	CDS	2681860	2682045	.	-	0	ID=cds2485;Name=YP_002403631.1;Parent=gene2661;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002403631.1,GeneID:7144796;gbkey=CDS;product=phage protein;protein_id=YP_002403631.1;transl_table=11
NC_011748.1	RefSeq	gene	2682088	2683359	.	-	.	ID=gene2662;Name=p;Dbxref=GeneID:7144797;gbkey=Gene;gene=p;locus_tag=EC55989_2611
NC_011748.1	RefSeq	CDS	2682088	2683359	.	-	0	ID=cds2486;Name=YP_002403632.1;Parent=gene2662;Note=Evidence 2b : Function of strongly homologous gene%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002403632.1,GeneID:7144797;gbkey=CDS;product=Major head protein %28p24%29 %28Major coat protein%29;protein_id=YP_002403632.1;transl_table=11
NC_011748.1	RefSeq	gene	2683371	2684255	.	-	.	ID=gene2663;Name=EC55989_2612;Dbxref=GeneID:7147091;gbkey=Gene;locus_tag=EC55989_2612
NC_011748.1	RefSeq	CDS	2683371	2684255	.	-	0	ID=cds2487;Name=YP_002403633.1;Parent=gene2663;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002403633.1,GeneID:7147091;gbkey=CDS;product=scaffold protein;protein_id=YP_002403633.1;transl_table=11
NC_011748.1	RefSeq	gene	2684269	2686467	.	-	.	ID=gene2664;Name=EC55989_2613;Dbxref=GeneID:7144798;gbkey=Gene;locus_tag=EC55989_2613
NC_011748.1	RefSeq	CDS	2684269	2686467	.	-	0	ID=cds2488;Name=YP_002403634.1;Parent=gene2664;Note=Evidence 2b : Function of strongly homologous gene%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002403634.1,GeneID:7144798;gbkey=CDS;product=portal protein p19;protein_id=YP_002403634.1;transl_table=11
NC_011748.1	RefSeq	STS	2685782	2686127	.	+	.	ID=id203;Dbxref=UniSTS:474268;gbkey=STS
NC_011748.1	RefSeq	gene	2686398	2687810	.	-	.	ID=gene2665;Name=EC55989_2614;Dbxref=GeneID:7144799;gbkey=Gene;locus_tag=EC55989_2614
NC_011748.1	RefSeq	CDS	2686398	2687810	.	-	0	ID=cds2489;Name=YP_002403635.1;Parent=gene2665;Note=Evidence 2b : Function of strongly homologous gene%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002403635.1,GeneID:7144799;gbkey=CDS;product=Terminase large subunit;protein_id=YP_002403635.1;transl_table=11
NC_011748.1	RefSeq	gene	2687807	2688232	.	-	.	ID=gene2666;Name=EC55989_2615;Dbxref=GeneID:7144800;gbkey=Gene;locus_tag=EC55989_2615
NC_011748.1	RefSeq	CDS	2687807	2688232	.	-	0	ID=cds2490;Name=YP_002403636.1;Parent=gene2666;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002403636.1,GeneID:7144800;gbkey=CDS;product=terminase small subunit;protein_id=YP_002403636.1;transl_table=11
NC_011748.1	RefSeq	gene	2688312	2688554	.	-	.	ID=gene2667;Name=EC55989_2616;Dbxref=GeneID:7144801;gbkey=Gene;locus_tag=EC55989_2616
NC_011748.1	RefSeq	CDS	2688312	2688554	.	-	0	ID=cds2491;Name=YP_002403637.1;Parent=gene2667;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002403637.1,GeneID:7144801;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403637.1;transl_table=11
NC_011748.1	RefSeq	gene	2688658	2689038	.	-	.	ID=gene2668;Name=EC55989_2617;Dbxref=GeneID:7144802;gbkey=Gene;locus_tag=EC55989_2617
NC_011748.1	RefSeq	CDS	2688658	2689038	.	-	0	ID=cds2492;Name=YP_002403638.1;Parent=gene2668;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002403638.1,GeneID:7144802;gbkey=CDS;product=phage protein;protein_id=YP_002403638.1;transl_table=11
NC_011748.1	RefSeq	gene	2689272	2689751	.	-	.	ID=gene2669;Name=EC55989_2618;Dbxref=GeneID:7144803;gbkey=Gene;locus_tag=EC55989_2618
NC_011748.1	RefSeq	CDS	2689272	2689751	.	-	0	ID=cds2493;Name=YP_002403639.1;Parent=gene2669;Note=Evidence 5 : No homology to any previously reported sequences%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002403639.1,GeneID:7144803;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403639.1;transl_table=11
NC_011748.1	RefSeq	gene	2689973	2690422	.	-	.	ID=gene2670;Name=EC55989_2619;Dbxref=GeneID:7144804;gbkey=Gene;locus_tag=EC55989_2619
NC_011748.1	RefSeq	CDS	2689973	2690422	.	-	0	ID=cds2494;Name=YP_002403640.1;Parent=gene2670;Note=Evidence 2b : Function of strongly homologous gene%3B Product type e : enzyme;Dbxref=Genbank:YP_002403640.1,GeneID:7144804;gbkey=CDS;product=bacteriophage lysis protein;protein_id=YP_002403640.1;transl_table=11
NC_011748.1	RefSeq	gene	2690407	2690904	.	-	.	ID=gene2671;Name=ybcS;Dbxref=GeneID:7144805;gbkey=Gene;gene=ybcS;locus_tag=EC55989_2620
NC_011748.1	RefSeq	CDS	2690407	2690904	.	-	0	ID=cds2495;Name=YP_002403641.1;Parent=gene2671;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 3017988%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002403641.1,GeneID:7144805;gbkey=CDS;product=lysozyme%3B DLP12 prophage;protein_id=YP_002403641.1;transl_table=11
NC_011748.1	RefSeq	gene	2690882	2691085	.	-	.	ID=gene2672;Name=EC55989_2621;Dbxref=GeneID:7148136;gbkey=Gene;locus_tag=EC55989_2621
NC_011748.1	RefSeq	CDS	2690882	2691085	.	-	0	ID=cds2496;Name=YP_002403642.1;Parent=gene2672;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002403642.1,GeneID:7148136;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403642.1;transl_table=11
NC_011748.1	RefSeq	gene	2691335	2691448	.	+	.	ID=gene2673;Name=EC55989_2622;Dbxref=GeneID:7144806;gbkey=Gene;locus_tag=EC55989_2622;pseudo=true
NC_011748.1	RefSeq	region	2691335	2691448	.	+	.	ID=id204;Note=fragment of conserved hypothetical protein %28partial%29%3BEvidence 7 : Gene remnant;Dbxref=GeneID:7144806;gbkey=misc_feature
NC_011748.1	RefSeq	gene	2691570	2691842	.	+	.	ID=gene2674;Name=EC55989_2624;Dbxref=GeneID:7144807;gbkey=Gene;locus_tag=EC55989_2624
NC_011748.1	RefSeq	CDS	2691570	2691842	.	+	0	ID=cds2497;Name=YP_002403643.1;Parent=gene2674;Note=Evidence 5 : No homology to any previously reported sequences;Dbxref=Genbank:YP_002403643.1,GeneID:7144807;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403643.1;transl_table=11
NC_011748.1	RefSeq	gene	2691876	2692364	.	-	.	ID=gene2675;Name=EC55989_2625;Dbxref=GeneID:7144808;gbkey=Gene;locus_tag=EC55989_2625
NC_011748.1	RefSeq	CDS	2691876	2692364	.	-	0	ID=cds2498;Name=YP_002403644.1;Parent=gene2675;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002403644.1,GeneID:7144808;gbkey=CDS;product=phage antitermination protein Q;protein_id=YP_002403644.1;transl_table=11
NC_011748.1	RefSeq	gene	2692546	2692908	.	-	.	ID=gene2676;Name=rusA;Dbxref=GeneID:7144809;gbkey=Gene;gene=rusA;locus_tag=EC55989_2626
NC_011748.1	RefSeq	CDS	2692546	2692908	.	-	0	ID=cds2499;Name=YP_002403645.1;Parent=gene2676;Note=Evidence 2b : Function of strongly homologous gene%3B Product type e : enzyme;Dbxref=Genbank:YP_002403645.1,GeneID:7144809;gbkey=CDS;product=crossover junction endodeoxyribonuclease;protein_id=YP_002403645.1;transl_table=11
NC_011748.1	RefSeq	gene	2692905	2693195	.	-	.	ID=gene2677;Name=EC55989_2627;Dbxref=GeneID:7147560;gbkey=Gene;locus_tag=EC55989_2627
NC_011748.1	RefSeq	CDS	2692905	2693195	.	-	0	ID=cds2500;Name=YP_002403646.1;Parent=gene2677;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403646.1,GeneID:7147560;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403646.1;transl_table=11
NC_011748.1	RefSeq	gene	2693195	2693917	.	-	.	ID=gene2678;Name=roi;Dbxref=GeneID:7144810;gbkey=Gene;gene=roi;locus_tag=EC55989_2628
NC_011748.1	RefSeq	CDS	2693195	2693917	.	-	0	ID=cds2501;Name=YP_002403647.1;Parent=gene2678;Note=Evidence 2b : Function of strongly homologous gene%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002403647.1,GeneID:7144810;gbkey=CDS;product=DNA-binding protein from phage origin;protein_id=YP_002403647.1;transl_table=11
NC_011748.1	RefSeq	gene	2693910	2694080	.	-	.	ID=gene2679;Name=ninF;Dbxref=GeneID:7147459;gbkey=Gene;gene=ninF;locus_tag=EC55989_2629
NC_011748.1	RefSeq	CDS	2693910	2694080	.	-	0	ID=cds2502;Name=YP_002403648.1;Parent=gene2679;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403648.1,GeneID:7147459;gbkey=CDS;product=phage protein;protein_id=YP_002403648.1;transl_table=11
NC_011748.1	RefSeq	gene	2694256	2694666	.	-	.	ID=gene2680;Name=EC55989_2630;Dbxref=GeneID:7147002;gbkey=Gene;locus_tag=EC55989_2630
NC_011748.1	RefSeq	CDS	2694256	2694666	.	-	0	ID=cds2503;Name=YP_002403649.1;Parent=gene2680;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002403649.1,GeneID:7147002;gbkey=CDS;product=ninB protein;protein_id=YP_002403649.1;transl_table=11
NC_011748.1	RefSeq	gene	2694866	2695180	.	-	.	ID=gene2681;Name=EC55989_2631;Dbxref=GeneID:7144811;gbkey=Gene;locus_tag=EC55989_2631
NC_011748.1	RefSeq	CDS	2694866	2695180	.	-	0	ID=cds2504;Name=YP_002403650.1;Parent=gene2681;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002403650.1,GeneID:7144811;gbkey=CDS;product=phage protein;protein_id=YP_002403650.1;transl_table=11
NC_011748.1	RefSeq	gene	2695198	2695404	.	-	.	ID=gene2682;Name=EC55989_2632;Dbxref=GeneID:7144812;gbkey=Gene;locus_tag=EC55989_2632
NC_011748.1	RefSeq	CDS	2695198	2695404	.	-	0	ID=cds2505;Name=YP_002403651.1;Parent=gene2682;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002403651.1,GeneID:7144812;gbkey=CDS;product=phage protein;protein_id=YP_002403651.1;transl_table=11
NC_011748.1	RefSeq	gene	2695480	2696931	.	-	.	ID=gene2683;Name=P;Dbxref=GeneID:7144813;gbkey=Gene;gene=P;locus_tag=EC55989_2633
NC_011748.1	RefSeq	CDS	2695480	2696931	.	-	0	ID=cds2506;Name=YP_002403652.1;Parent=gene2683;Note=Evidence 2b : Function of strongly homologous gene%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002403652.1,GeneID:7144813;gbkey=CDS;product=P protein%3B replicative DNA helicase;protein_id=YP_002403652.1;transl_table=11
NC_011748.1	RefSeq	gene	2696906	2697796	.	-	.	ID=gene2684;Name=O;Dbxref=GeneID:7147092;gbkey=Gene;gene=O;locus_tag=EC55989_2634
NC_011748.1	RefSeq	CDS	2696906	2697796	.	-	0	ID=cds2507;Name=YP_002403653.1;Parent=gene2684;Note=Evidence 2b : Function of strongly homologous gene%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002403653.1,GeneID:7147092;gbkey=CDS;product=replication protein O;protein_id=YP_002403653.1;transl_table=11
NC_011748.1	RefSeq	gene	2697783	2697944	.	-	.	ID=gene2685;Name=EC55989_2635;Dbxref=GeneID:7147062;gbkey=Gene;locus_tag=EC55989_2635
NC_011748.1	RefSeq	CDS	2697783	2697944	.	-	0	ID=cds2508;Name=YP_002403654.1;Parent=gene2685;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002403654.1,GeneID:7147062;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403654.1;transl_table=11
NC_011748.1	RefSeq	gene	2697979	2698344	.	-	.	ID=gene2686;Name=C;Dbxref=GeneID:7144814;gbkey=Gene;gene=C;locus_tag=EC55989_2636
NC_011748.1	RefSeq	CDS	2697979	2698344	.	-	0	ID=cds2509;Name=YP_002403655.1;Parent=gene2686;Note=Evidence 2b : Function of strongly homologous gene%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002403655.1,GeneID:7144814;gbkey=CDS;product=Transcriptional activator protein C1 %28modular protein%29;protein_id=YP_002403655.1;transl_table=11
NC_011748.1	RefSeq	gene	2698366	2698551	.	-	.	ID=gene2687;Name=cro;Dbxref=GeneID:7145646;gbkey=Gene;gene=cro;locus_tag=EC55989_2637
NC_011748.1	RefSeq	CDS	2698366	2698551	.	-	0	ID=cds2510;Name=YP_002403656.1;Parent=gene2687;Note=Evidence 2b : Function of strongly homologous gene%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002403656.1,GeneID:7145646;gbkey=CDS;product=Regulatory protein cro %28Antirepressor%29;protein_id=YP_002403656.1;transl_table=11
NC_011748.1	RefSeq	gene	2698632	2699282	.	+	.	ID=gene2688;Name=cII;Dbxref=GeneID:7145759;gbkey=Gene;gene=cII;locus_tag=EC55989_2638
NC_011748.1	RefSeq	CDS	2698632	2699282	.	+	0	ID=cds2511;Name=YP_002403657.1;Parent=gene2688;Note=Evidence 2b : Function of strongly homologous gene%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002403657.1,GeneID:7145759;gbkey=CDS;product=Repressor protein CII;protein_id=YP_002403657.1;transl_table=11
NC_011748.1	RefSeq	gene	2699454	2699639	.	-	.	ID=gene2689;Name=EC55989_2639;Dbxref=GeneID:7145707;gbkey=Gene;locus_tag=EC55989_2639
NC_011748.1	RefSeq	CDS	2699454	2699639	.	-	0	ID=cds2512;Name=YP_002403658.1;Parent=gene2689;Note=Evidence 5 : No homology to any previously reported sequences%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002403658.1,GeneID:7145707;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403658.1;transl_table=11
NC_011748.1	RefSeq	gene	2700054	2700353	.	+	.	ID=gene2690;Name=N;Dbxref=GeneID:7144815;gbkey=Gene;gene=N;locus_tag=EC55989_2640;pseudo=true
NC_011748.1	RefSeq	region	2700054	2700353	.	+	.	ID=id205;Note=fragment of regulatory protein N %28partial%29%3BEvidence 7 : Gene remnant%3B Product type h : extrachromosomal origin;Dbxref=GeneID:7144815;gbkey=misc_feature
NC_011748.1	RefSeq	gene	2700362	2700832	.	+	.	ID=gene2691;Name=EC55989_2641;Dbxref=GeneID:7146940;gbkey=Gene;locus_tag=EC55989_2641
NC_011748.1	RefSeq	CDS	2700362	2700832	.	+	0	ID=cds2513;Name=YP_002403659.1;Parent=gene2691;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403659.1,GeneID:7146940;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403659.1;transl_table=11
NC_011748.1	RefSeq	gene	2700922	2701197	.	+	.	ID=gene2692;Name=EC55989_2642;Dbxref=GeneID:7144816;gbkey=Gene;locus_tag=EC55989_2642
NC_011748.1	RefSeq	CDS	2700922	2701197	.	+	0	ID=cds2514;Name=YP_002403660.1;Parent=gene2692;Note=Evidence 5 : No homology to any previously reported sequences%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002403660.1,GeneID:7144816;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403660.1;transl_table=11
NC_011748.1	RefSeq	gene	2701164	2701364	.	+	.	ID=gene2693;Name=EC55989_2643;Dbxref=GeneID:7144817;gbkey=Gene;locus_tag=EC55989_2643
NC_011748.1	RefSeq	CDS	2701164	2701364	.	+	0	ID=cds2515;Name=YP_002403661.1;Parent=gene2693;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002403661.1,GeneID:7144817;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403661.1;transl_table=11
NC_011748.1	RefSeq	gene	2701273	2701443	.	+	.	ID=gene2694;Name=EC55989_2644;Dbxref=GeneID:7144818;gbkey=Gene;locus_tag=EC55989_2644
NC_011748.1	RefSeq	CDS	2701273	2701443	.	+	0	ID=cds2516;Name=YP_002403662.1;Parent=gene2694;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002403662.1,GeneID:7144818;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403662.1;transl_table=11
NC_011748.1	RefSeq	gene	2701424	2702059	.	+	.	ID=gene2695;Name=erf;Dbxref=GeneID:7144819;gbkey=Gene;gene=erf;locus_tag=EC55989_2645
NC_011748.1	RefSeq	CDS	2701424	2702059	.	+	0	ID=cds2517;Name=YP_002403663.1;Parent=gene2695;Note=Evidence 2b : Function of strongly homologous gene%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002403663.1,GeneID:7144819;gbkey=CDS;product=DNA single-strand annealing protein%3B essential recombination function protein Erf;protein_id=YP_002403663.1;transl_table=11
NC_011748.1	RefSeq	gene	2701969	2702442	.	+	.	ID=gene2696;Name=EC55989_2646;Dbxref=GeneID:7146021;gbkey=Gene;locus_tag=EC55989_2646
NC_011748.1	RefSeq	CDS	2701969	2702442	.	+	0	ID=cds2518;Name=YP_002403664.1;Parent=gene2696;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002403664.1,GeneID:7146021;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403664.1;transl_table=11
NC_011748.1	RefSeq	gene	2702466	2702762	.	+	.	ID=gene2697;Name=abc;Dbxref=GeneID:7144820;gbkey=Gene;gene=abc;locus_tag=EC55989_2647
NC_011748.1	RefSeq	CDS	2702466	2702762	.	+	0	ID=cds2519;Name=YP_002403665.1;Parent=gene2697;Note=Evidence 2b : Function of strongly homologous gene%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002403665.1,GeneID:7144820;gbkey=CDS;product=Anti-RecBCD protein 2;protein_id=YP_002403665.1;transl_table=11
NC_011748.1	RefSeq	gene	2702773	2703063	.	+	.	ID=gene2698;Name=EC55989_2648;Dbxref=GeneID:7145422;gbkey=Gene;locus_tag=EC55989_2648;pseudo=true
NC_011748.1	RefSeq	region	2702773	2703063	.	+	.	ID=id206;Note=fragment of Conserved hypothetical protein %28partial%29%3BEvidence 7 : Gene remnant%3B Product type h : extrachromosomal origin;Dbxref=GeneID:7145422;gbkey=misc_feature
NC_011748.1	RefSeq	gene	2703224	2703895	.	+	.	ID=gene2699;Name=EC55989_2649;Dbxref=GeneID:7144821;gbkey=Gene;locus_tag=EC55989_2649
NC_011748.1	RefSeq	CDS	2703224	2703895	.	+	0	ID=cds2520;Name=YP_002403666.1;Parent=gene2699;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002403666.1,GeneID:7144821;gbkey=CDS;product=EA22-like protein%3B similarities with EA22 from lambda %28modular protein involved in blocking host replication%29;protein_id=YP_002403666.1;transl_table=11
NC_011748.1	RefSeq	gene	2704068	2704256	.	+	.	ID=gene2700;Name=EC55989_2650;Dbxref=GeneID:7144822;gbkey=Gene;locus_tag=EC55989_2650
NC_011748.1	RefSeq	CDS	2704068	2704256	.	+	0	ID=cds2521;Name=YP_002403667.1;Parent=gene2700;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002403667.1,GeneID:7144822;gbkey=CDS;product=prophage protein;protein_id=YP_002403667.1;transl_table=11
NC_011748.1	RefSeq	gene	2704258	2704467	.	+	.	ID=gene2701;Name=EC55989_2651;Dbxref=GeneID:7144823;gbkey=Gene;locus_tag=EC55989_2651
NC_011748.1	RefSeq	CDS	2704258	2704467	.	+	0	ID=cds2522;Name=YP_002403668.1;Parent=gene2701;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002403668.1,GeneID:7144823;gbkey=CDS;product=prophage protein;protein_id=YP_002403668.1;transl_table=11
NC_011748.1	RefSeq	gene	2704464	2705093	.	+	.	ID=gene2702;Name=EC55989_2652;Dbxref=GeneID:7144824;gbkey=Gene;locus_tag=EC55989_2652
NC_011748.1	RefSeq	CDS	2704464	2705093	.	+	0	ID=cds2523;Name=YP_002403669.1;Parent=gene2702;Note=Evidence 7 : Gene remnant%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002403669.1,GeneID:7144824;gbkey=CDS;product=prophage protein %28fragment%29;protein_id=YP_002403669.1;transl_table=11
NC_011748.1	RefSeq	gene	2705501	2705701	.	+	.	ID=gene2703;Name=torI;Dbxref=GeneID:7144825;gbkey=Gene;gene=torI;locus_tag=EC55989_2653
NC_011748.1	RefSeq	CDS	2705501	2705701	.	+	0	ID=cds2524;Name=YP_002403670.1;Parent=gene2703;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 15197250%3B Product type r : regulator;Dbxref=Genbank:YP_002403670.1,GeneID:7144825;gbkey=CDS;product=response regulator inhibitor for tor operon;protein_id=YP_002403670.1;transl_table=11
NC_011748.1	RefSeq	gene	2706231	2707478	.	-	.	ID=gene2704;Name=lacY;Dbxref=GeneID:7147823;gbkey=Gene;gene=lacY;locus_tag=EC55989_2654
NC_011748.1	RefSeq	CDS	2706231	2707478	.	-	0	ID=cds2525;Name=YP_002403671.1;Parent=gene2704;Note=lactose%2Fproton symporter%3B mediates lactose%2Fproton symport through the membrane by utilizing the proton gradient to drive transport of galactosides%3B member of major facilitator superfamily%3B functions as a monomer with 12 transmembrane segments;Dbxref=Genbank:YP_002403671.1,GeneID:7147823;gbkey=CDS;product=galactoside permease;protein_id=YP_002403671.1;transl_table=11
NC_011748.1	RefSeq	gene	2707550	2708464	.	-	.	ID=gene2705;Name=cscK;Dbxref=GeneID:7145764;gbkey=Gene;gene=cscK;locus_tag=EC55989_2655
NC_011748.1	RefSeq	CDS	2707550	2708464	.	-	0	ID=cds2526;Name=YP_002403672.1;Parent=gene2705;Note=phosphorylates aminoimidazole ribotide %28AIR%29 which forms 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate %28HMP-P%29%3B synthesis of HMP-P from AIR is complex and requires the product of thiC gene at least;Dbxref=Genbank:YP_002403672.1,GeneID:7145764;gbkey=CDS;product=aminoimidazole riboside kinase;protein_id=YP_002403672.1;transl_table=11
NC_011748.1	RefSeq	gene	2708671	2710113	.	+	.	ID=gene2706;Name=cscA;Dbxref=GeneID:7145765;gbkey=Gene;gene=cscA;locus_tag=EC55989_2656
NC_011748.1	RefSeq	CDS	2708671	2710113	.	+	0	ID=cds2527;Name=YP_002403673.1;Parent=gene2706;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 12218016%3B Product type e : enzyme;Dbxref=Genbank:YP_002403673.1,GeneID:7145765;gbkey=CDS;product=sucrose-6-phosphate hydrolase;protein_id=YP_002403673.1;transl_table=11
NC_011748.1	RefSeq	gene	2710121	2711302	.	-	.	ID=gene2707;Name=cscR;Dbxref=GeneID:7145763;gbkey=Gene;gene=cscR;locus_tag=EC55989_2657
NC_011748.1	RefSeq	CDS	2710121	2711302	.	-	0	ID=cds2528;Name=YP_002403674.1;Parent=gene2707;Note=Evidence 2b : Function of strongly homologous gene%3B Product type r : regulator;Dbxref=Genbank:YP_002403674.1,GeneID:7145763;gbkey=CDS;product=Sucrose operon repressor %28Csc operon regulatory protein%29;protein_id=YP_002403674.1;transl_table=11
NC_011748.1	RefSeq	gene	2711347	2711565	.	+	.	ID=gene2708;Name=dsdX;Dbxref=GeneID:7145766;gbkey=Gene;gene=dsdX;locus_tag=EC55989_2658;pseudo=true
NC_011748.1	RefSeq	region	2711347	2711565	.	+	.	ID=id207;Note=fragment of  transporter %28partial%29%3BEvidence 7 : Gene remnant%3B Product type pt :  transporter;Dbxref=GeneID:7145766;gbkey=misc_feature
NC_011748.1	RefSeq	gene	2711583	2712911	.	+	.	ID=gene2709;Name=dsdA;Dbxref=GeneID:7145955;gbkey=Gene;gene=dsdA;locus_tag=EC55989_2659
NC_011748.1	RefSeq	CDS	2711583	2712911	.	+	0	ID=cds2529;Name=YP_002403675.1;Parent=gene2709;Note=catalyzes the formation of pyruvate from serine;Dbxref=Genbank:YP_002403675.1,GeneID:7145955;gbkey=CDS;product=D-serine dehydratase;protein_id=YP_002403675.1;transl_table=11
NC_011748.1	RefSeq	gene	2713019	2714557	.	-	.	ID=gene2710;Name=emrY;Dbxref=GeneID:7145954;gbkey=Gene;gene=emrY;locus_tag=EC55989_2660
NC_011748.1	RefSeq	CDS	2713019	2714557	.	-	0	ID=cds2530;Name=YP_002403676.1;Parent=gene2710;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 20378313%3B Product type pt :  transporter;Dbxref=Genbank:YP_002403676.1,GeneID:7145954;gbkey=CDS;product=multidrug efflux system;protein_id=YP_002403676.1;transl_table=11
NC_011748.1	RefSeq	gene	2714557	2715720	.	-	.	ID=gene2711;Name=emrK;Dbxref=GeneID:7145995;gbkey=Gene;gene=emrK;locus_tag=EC55989_2661
NC_011748.1	RefSeq	CDS	2714557	2715720	.	-	0	ID=cds2531;Name=YP_002403677.1;Parent=gene2711;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 20378313%3B Product type t : transporter;Dbxref=Genbank:YP_002403677.1,GeneID:7145995;gbkey=CDS;product=EmrKY-TolC multidrug resistance efflux pump%2C membrane fusion protein component;protein_id=YP_002403677.1;transl_table=11
NC_011748.1	RefSeq	gene	2716136	2716750	.	+	.	ID=gene2712;Name=evgA;Dbxref=GeneID:7145994;gbkey=Gene;gene=evgA;locus_tag=EC55989_2662
NC_011748.1	RefSeq	CDS	2716136	2716750	.	+	0	ID=cds2532;Name=YP_002403678.1;Parent=gene2712;Note=response regulator in two-component regulatory system with EvgS%3B phosphorylated EvgA activates ompC%2C emrKY%2C gadABC%2C hdeAB and others genes%3B involved in acid resistance%2C osmotic adaption%2C and drug resistance;Dbxref=Genbank:YP_002403678.1,GeneID:7145994;gbkey=CDS;product=DNA-binding transcriptional activator EvgA;protein_id=YP_002403678.1;transl_table=11
NC_011748.1	RefSeq	gene	2716755	2720348	.	+	.	ID=gene2713;Name=evgS;Dbxref=GeneID:7146038;gbkey=Gene;gene=evgS;locus_tag=EC55989_2663
NC_011748.1	RefSeq	CDS	2716755	2720348	.	+	0	ID=cds2533;Name=YP_002403679.1;Parent=gene2713;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 14523115%2C 93173621%2C 9501520%2C 10923791%2C 1289796%2C 8125343%2C 9535079%3B Product type r : regulator;Dbxref=Genbank:YP_002403679.1,GeneID:7146038;gbkey=CDS;product=hybrid sensory histidine kinase in two-component regulatory system with EvgA;protein_id=YP_002403679.1;transl_table=11
NC_011748.1	RefSeq	gene	2720404	2721549	.	-	.	ID=gene2714;Name=yfdE;Dbxref=GeneID:7146039;gbkey=Gene;gene=yfdE;locus_tag=EC55989_2664
NC_011748.1	RefSeq	CDS	2720404	2721549	.	-	0	ID=cds2534;Name=YP_002403680.1;Parent=gene2714;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002403680.1,GeneID:7146039;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403680.1;transl_table=11
NC_011748.1	RefSeq	gene	2721623	2722567	.	-	.	ID=gene2715;Name=yfdV;Dbxref=GeneID:7148724;gbkey=Gene;gene=yfdV;locus_tag=EC55989_2665
NC_011748.1	RefSeq	CDS	2721623	2722567	.	-	0	ID=cds2535;Name=YP_002403681.1;Parent=gene2715;Note=member of the AEC family of auxin efflux transporters%3B unknown function;Dbxref=Genbank:YP_002403681.1,GeneID:7148724;gbkey=CDS;product=transporter YfdV;protein_id=YP_002403681.1;transl_table=11
NC_011748.1	RefSeq	gene	2722637	2724331	.	-	.	ID=gene2716;Name=oxc;Dbxref=GeneID:7148726;gbkey=Gene;gene=oxc;locus_tag=EC55989_2666
NC_011748.1	RefSeq	CDS	2722637	2724331	.	-	0	ID=cds2536;Name=YP_002403682.1;Parent=gene2716;Note=catalyzes the formation of formyl-CoA from oxalyl-CoA;Dbxref=Genbank:YP_002403682.1,GeneID:7148726;gbkey=CDS;product=oxalyl-CoA decarboxylase;protein_id=YP_002403682.1;transl_table=11
NC_011748.1	RefSeq	gene	2724385	2725635	.	-	.	ID=gene2717;Name=frc;Dbxref=GeneID:7147087;gbkey=Gene;gene=frc;locus_tag=EC55989_2667
NC_011748.1	RefSeq	CDS	2724385	2725635	.	-	0	ID=cds2537;Name=YP_002403683.1;Parent=gene2717;Note=catalyzes the formation of oxalyl-CoA from oxalate and Formyl-CoA;Dbxref=Genbank:YP_002403683.1,GeneID:7147087;gbkey=CDS;product=formyl-coenzyme A transferase;protein_id=YP_002403683.1;transl_table=11
NC_011748.1	RefSeq	gene	2726148	2726780	.	-	.	ID=gene2718;Name=yfdX;Dbxref=GeneID:7146178;gbkey=Gene;gene=yfdX;locus_tag=EC55989_2669
NC_011748.1	RefSeq	CDS	2726148	2726780	.	-	0	ID=cds2538;Name=YP_002403684.1;Parent=gene2718;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 11157960;Dbxref=Genbank:YP_002403684.1,GeneID:7146178;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403684.1;transl_table=11
NC_011748.1	RefSeq	gene	2727076	2727351	.	+	.	ID=gene2719;Name=ypdI;Dbxref=GeneID:7148727;gbkey=Gene;gene=ypdI;locus_tag=EC55989_2671
NC_011748.1	RefSeq	CDS	2727076	2727351	.	+	0	ID=cds2539;Name=YP_002403685.1;Parent=gene2719;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 15183873%3B Product type lp : lipoprotein;Dbxref=Genbank:YP_002403685.1,GeneID:7148727;gbkey=CDS;product=lipoprotein;protein_id=YP_002403685.1;transl_table=11
NC_011748.1	RefSeq	gene	2727428	2727670	.	-	.	ID=gene2720;Name=yfdY;Dbxref=GeneID:7149370;gbkey=Gene;gene=yfdY;locus_tag=EC55989_2672
NC_011748.1	RefSeq	CDS	2727428	2727670	.	-	0	ID=cds2540;Name=YP_002403686.1;Parent=gene2720;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 14727089%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002403686.1,GeneID:7149370;gbkey=CDS;product=inner membrane protein;protein_id=YP_002403686.1;transl_table=11
NC_011748.1	RefSeq	region	2727904	2727978	.	-	.	ID=id208;Note=similar to hypothetical protein%3B Evidence 4 : Homologs of previously reported genes of unknown function;gbkey=misc_feature
NC_011748.1	RefSeq	gene	2728023	2728943	.	+	.	ID=gene2721;Name=ddg;Dbxref=GeneID:7144826;gbkey=Gene;gene=ddg;locus_tag=EC55989_2674
NC_011748.1	RefSeq	CDS	2728023	2728943	.	+	0	ID=cds2541;Name=YP_002403688.1;Parent=gene2721;Note=Acylates the intermediate %28KDO%292-lipid IVA to form %28KDO%292-%28palmitoleoyl%29-lipid IVA in cells subjected to cold shock;Dbxref=Genbank:YP_002403688.1,GeneID:7144826;gbkey=CDS;product=lipid A biosynthesis palmitoleoyl acyltransferase;protein_id=YP_002403688.1;transl_table=11
NC_011748.1	RefSeq	gene	2728572	2729007	.	-	.	ID=gene2722;Name=tpke70;Dbxref=GeneID:7145866;gbkey=Gene;gene=tpke70;locus_tag=EC55989_misc_RNA_54
NC_011748.1	RefSeq	transcript	2728572	2729007	.	-	.	ID=rna100;Parent=gene2722;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 11553332%3B Product type n : RNA;Dbxref=GeneID:7145866;gbkey=misc_RNA;product=tpke70
NC_011748.1	RefSeq	exon	2728572	2729007	.	-	.	ID=id209;Parent=rna100;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 11553332%3B Product type n : RNA;Dbxref=GeneID:7145866;gbkey=misc_RNA;product=tpke70
NC_011748.1	RefSeq	gene	2729435	2730673	.	-	.	ID=gene2723;Name=yfdZ;Dbxref=GeneID:7147832;gbkey=Gene;gene=yfdZ;locus_tag=EC55989_2675
NC_011748.1	RefSeq	CDS	2729435	2730673	.	-	0	ID=cds2542;Name=YP_002403689.1;Parent=gene2723;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002403689.1,GeneID:7147832;gbkey=CDS;product=aminotransferase;protein_id=YP_002403689.1;transl_table=11
NC_011748.1	RefSeq	gene	2731050	2732747	.	+	.	ID=gene2724;Name=ypdA;Dbxref=GeneID:7148729;gbkey=Gene;gene=ypdA;locus_tag=EC55989_2676
NC_011748.1	RefSeq	CDS	2731050	2732747	.	+	0	ID=cds2543;Name=YP_002403690.1;Parent=gene2724;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 15522865%3B Product type prc :  receptor;Dbxref=Genbank:YP_002403690.1,GeneID:7148729;gbkey=CDS;product=sensory kinase in two-component system with YpdB;protein_id=YP_002403690.1;transl_table=11
NC_011748.1	RefSeq	gene	2732762	2733496	.	+	.	ID=gene2725;Name=ypdB;Dbxref=GeneID:7149362;gbkey=Gene;gene=ypdB;locus_tag=EC55989_2677
NC_011748.1	RefSeq	CDS	2732762	2733496	.	+	0	ID=cds2544;Name=YP_002403691.1;Parent=gene2725;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 15522865%3B Product type pr :  regulator;Dbxref=Genbank:YP_002403691.1,GeneID:7149362;gbkey=CDS;product=response regulator in two-component system with YpdA;protein_id=YP_002403691.1;transl_table=11
NC_011748.1	RefSeq	gene	2733509	2734366	.	+	.	ID=gene2726;Name=ypdC;Dbxref=GeneID:7149363;gbkey=Gene;gene=ypdC;locus_tag=EC55989_2678
NC_011748.1	RefSeq	CDS	2733509	2734366	.	+	0	ID=cds2545;Name=YP_002403692.1;Parent=gene2726;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pr :  regulator;Dbxref=Genbank:YP_002403692.1,GeneID:7149363;gbkey=CDS;product=DNA-binding protein;protein_id=YP_002403692.1;transl_table=11
NC_011748.1	RefSeq	gene	2734369	2736864	.	-	.	ID=gene2727;Name=ypdD;Dbxref=GeneID:7149364;gbkey=Gene;gene=ypdD;locus_tag=EC55989_2679
NC_011748.1	RefSeq	CDS	2734369	2736864	.	-	0	ID=cds2546;Name=YP_002403693.1;Parent=gene2727;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002403693.1,GeneID:7149364;gbkey=CDS;product=fused PTS enzymes %28multiphosphoryl transfer protein%29: Hpr component %3B enzyme I component %3B enzyme IIA component;protein_id=YP_002403693.1;transl_table=11
NC_011748.1	RefSeq	gene	2736889	2737926	.	-	.	ID=gene2728;Name=ypdE;Dbxref=GeneID:7149365;gbkey=Gene;gene=ypdE;locus_tag=EC55989_2680
NC_011748.1	RefSeq	CDS	2736889	2737926	.	-	0	ID=cds2547;Name=YP_002403694.1;Parent=gene2728;Note=metalloprotein;Dbxref=Genbank:YP_002403694.1,GeneID:7149365;gbkey=CDS;product=exoaminopeptidase;protein_id=YP_002403694.1;transl_table=11
NC_011748.1	RefSeq	gene	2737926	2739011	.	-	.	ID=gene2729;Name=ypdF;Dbxref=GeneID:7149366;gbkey=Gene;gene=ypdF;locus_tag=EC55989_2681
NC_011748.1	RefSeq	CDS	2737926	2739011	.	-	0	ID=cds2548;Name=YP_002403695.1;Parent=gene2729;Note=Xaa-Pro aminopeptidase%3B limited methionine aminopeptidase;Dbxref=Genbank:YP_002403695.1,GeneID:7149366;gbkey=CDS;product=aminopeptidase;protein_id=YP_002403695.1;transl_table=11
NC_011748.1	RefSeq	gene	2739026	2740273	.	-	.	ID=gene2730;Name=ypdG;Dbxref=GeneID:7149367;gbkey=Gene;gene=ypdG;locus_tag=EC55989_2682
NC_011748.1	RefSeq	CDS	2739026	2740273	.	-	0	ID=cds2549;Name=YP_002403696.1;Parent=gene2730;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002403696.1,GeneID:7149367;gbkey=CDS;product=enzyme IIC component of PTS;protein_id=YP_002403696.1;transl_table=11
NC_011748.1	RefSeq	gene	2740295	2740621	.	-	.	ID=gene2731;Name=ypdH;Dbxref=GeneID:7149368;gbkey=Gene;gene=ypdH;locus_tag=EC55989_2683
NC_011748.1	RefSeq	CDS	2740295	2740621	.	-	0	ID=cds2550;Name=YP_002403697.1;Parent=gene2731;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002403697.1,GeneID:7149368;gbkey=CDS;product=enzyme IIB component of PTS;protein_id=YP_002403697.1;transl_table=11
NC_011748.1	RefSeq	gene	2740840	2741805	.	-	.	ID=gene2732;Name=glk;Dbxref=GeneID:7149369;gbkey=Gene;gene=glk;locus_tag=EC55989_2684
NC_011748.1	RefSeq	CDS	2740840	2741805	.	-	0	ID=cds2551;Name=YP_002403698.1;Parent=gene2732;Note=catalyzes the conversion of ATP and D-glucose to ADP and D-glucose 6-phosphate;Dbxref=Genbank:YP_002403698.1,GeneID:7149369;gbkey=CDS;product=glucokinase;protein_id=YP_002403698.1;transl_table=11
NC_011748.1	RefSeq	STS	2740861	2741063	.	+	.	ID=id210;Dbxref=UniSTS:209647;gbkey=STS
NC_011748.1	RefSeq	gene	2742009	2743265	.	+	.	ID=gene2733;Name=yfeO;Dbxref=GeneID:7146298;gbkey=Gene;gene=yfeO;locus_tag=EC55989_2685
NC_011748.1	RefSeq	CDS	2742009	2743265	.	+	0	ID=cds2552;Name=YP_002403699.1;Parent=gene2733;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002403699.1,GeneID:7146298;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403699.1;transl_table=11
NC_011748.1	RefSeq	gene	2743380	2743706	.	+	.	ID=gene2734;Name=ypeC;Dbxref=GeneID:7148737;gbkey=Gene;gene=ypeC;locus_tag=EC55989_2686
NC_011748.1	RefSeq	CDS	2743380	2743706	.	+	0	ID=cds2553;Name=YP_002403700.1;Parent=gene2734;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403700.1,GeneID:7148737;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403700.1;transl_table=11
NC_011748.1	RefSeq	gene	2743847	2745085	.	-	.	ID=gene2735;Name=mntH;Dbxref=GeneID:7149373;gbkey=Gene;gene=mntH;locus_tag=EC55989_2687
NC_011748.1	RefSeq	CDS	2743847	2745085	.	-	0	ID=cds2554;Name=YP_002403701.1;Parent=gene2735;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 20177822%2C 20305051%2C 10712688%2C 10844693%3B Product type t : transporter;Dbxref=Genbank:YP_002403701.1,GeneID:7149373;gbkey=CDS;product=manganese transport protein MntH;protein_id=YP_002403701.1;transl_table=11
NC_011748.1	RefSeq	gene	2745421	2746623	.	+	.	ID=gene2736;Name=nupC;Dbxref=GeneID:7146870;gbkey=Gene;gene=nupC;locus_tag=EC55989_2688
NC_011748.1	RefSeq	CDS	2745421	2746623	.	+	0	ID=cds2555;Name=YP_002403702.1;Parent=gene2736;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 374403%2C 8022285%2C 7007808%2C 827549%2C 4563236%2C 1512211%3B Product type t : transporter;Dbxref=Genbank:YP_002403702.1,GeneID:7146870;gbkey=CDS;product=nucleoside %28except guanosine%29 transporter;protein_id=YP_002403702.1;transl_table=11
NC_011748.1	RefSeq	gene	2746673	2748862	.	-	.	ID=gene2737;Name=yfeA;Dbxref=GeneID:7147056;gbkey=Gene;gene=yfeA;locus_tag=EC55989_2689
NC_011748.1	RefSeq	CDS	2746673	2748862	.	-	0	ID=cds2556;Name=YP_002403703.1;Parent=gene2737;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002403703.1,GeneID:7147056;gbkey=CDS;product=diguanylate cyclase;protein_id=YP_002403703.1;transl_table=11
NC_011748.1	RefSeq	gene	2749070	2749145	.	-	.	ID=gene2738;Name=EC55989_tRNA75;Dbxref=GeneID:7148730;gbkey=Gene;locus_tag=EC55989_tRNA75
NC_011748.1	RefSeq	tRNA	2749070	2749145	.	-	.	ID=rna101;Dbxref=GeneID:7148730;gbkey=tRNA;product=tRNA-Ala
NC_011748.1	RefSeq	exon	2749070	2749145	.	-	.	ID=id211;Parent=rna101;Dbxref=GeneID:7148730;gbkey=tRNA;product=tRNA-Ala
NC_011748.1	RefSeq	gene	2749185	2749260	.	-	.	ID=gene2739;Name=EC55989_tRNA74;Dbxref=GeneID:7145389;gbkey=Gene;locus_tag=EC55989_tRNA74
NC_011748.1	RefSeq	tRNA	2749185	2749260	.	-	.	ID=rna102;Dbxref=GeneID:7145389;gbkey=tRNA;product=tRNA-Ala
NC_011748.1	RefSeq	exon	2749185	2749260	.	-	.	ID=id212;Parent=rna102;Dbxref=GeneID:7145389;gbkey=tRNA;product=tRNA-Ala
NC_011748.1	RefSeq	gene	2749496	2749840	.	+	.	ID=gene2740;Name=yfeC;Dbxref=GeneID:7145388;gbkey=Gene;gene=yfeC;locus_tag=EC55989_2691
NC_011748.1	RefSeq	CDS	2749496	2749840	.	+	0	ID=cds2557;Name=YP_002403704.1;Parent=gene2740;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pr :  regulator;Dbxref=Genbank:YP_002403704.1,GeneID:7145388;gbkey=CDS;product=nucleic acid-binding transcriptional regulator;protein_id=YP_002403704.1;transl_table=11
NC_011748.1	RefSeq	gene	2749842	2750234	.	+	.	ID=gene2741;Name=yfeD;Dbxref=GeneID:7148731;gbkey=Gene;gene=yfeD;locus_tag=EC55989_2692
NC_011748.1	RefSeq	CDS	2749842	2750234	.	+	0	ID=cds2558;Name=YP_002403705.1;Parent=gene2741;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pr :  regulator;Dbxref=Genbank:YP_002403705.1,GeneID:7148731;gbkey=CDS;product=nucleic acid-binding transcriptional regulator;protein_id=YP_002403705.1;transl_table=11
NC_011748.1	RefSeq	gene	2750286	2751701	.	-	.	ID=gene2742;Name=gltX;Dbxref=GeneID:7148732;gbkey=Gene;gene=gltX;locus_tag=EC55989_2693
NC_011748.1	RefSeq	CDS	2750286	2751701	.	-	0	ID=cds2559;Name=YP_002403706.1;Parent=gene2742;Note=Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation;Dbxref=Genbank:YP_002403706.1,GeneID:7148732;gbkey=CDS;product=glutamyl-tRNA synthetase;protein_id=YP_002403706.1;transl_table=11
NC_011748.1	RefSeq	gene	2751960	2752035	.	+	.	ID=gene2743;Name=EC55989_tRNA27;Dbxref=GeneID:7146336;gbkey=Gene;locus_tag=EC55989_tRNA27
NC_011748.1	RefSeq	tRNA	2751960	2752035	.	+	.	ID=rna103;Dbxref=GeneID:7146336;gbkey=tRNA;product=tRNA-Val
NC_011748.1	RefSeq	exon	2751960	2752035	.	+	.	ID=id213;Parent=rna103;Dbxref=GeneID:7146336;gbkey=tRNA;product=tRNA-Val
NC_011748.1	RefSeq	gene	2752080	2752155	.	+	.	ID=gene2744;Name=EC55989_tRNA28;Dbxref=GeneID:7145336;gbkey=Gene;locus_tag=EC55989_tRNA28
NC_011748.1	RefSeq	tRNA	2752080	2752155	.	+	.	ID=rna104;Dbxref=GeneID:7145336;gbkey=tRNA;product=tRNA-Val
NC_011748.1	RefSeq	exon	2752080	2752155	.	+	.	ID=id214;Parent=rna104;Dbxref=GeneID:7145336;gbkey=tRNA;product=tRNA-Val
NC_011748.1	RefSeq	gene	2752202	2752277	.	+	.	ID=gene2745;Name=EC55989_tRNA29;Dbxref=GeneID:7145337;gbkey=Gene;locus_tag=EC55989_tRNA29
NC_011748.1	RefSeq	tRNA	2752202	2752277	.	+	.	ID=rna105;Dbxref=GeneID:7145337;gbkey=tRNA;product=tRNA-Val
NC_011748.1	RefSeq	exon	2752202	2752277	.	+	.	ID=id215;Parent=rna105;Dbxref=GeneID:7145337;gbkey=tRNA;product=tRNA-Val
NC_011748.1	RefSeq	gene	2752282	2752357	.	+	.	ID=gene2746;Name=EC55989_tRNA30;Dbxref=GeneID:7145338;gbkey=Gene;locus_tag=EC55989_tRNA30
NC_011748.1	RefSeq	tRNA	2752282	2752357	.	+	.	ID=rna106;Dbxref=GeneID:7145338;gbkey=tRNA;product=tRNA-Lys
NC_011748.1	RefSeq	exon	2752282	2752357	.	+	.	ID=id216;Parent=rna106;Dbxref=GeneID:7145338;gbkey=tRNA;product=tRNA-Lys
NC_011748.1	RefSeq	gene	2752622	2753506	.	-	.	ID=gene2747;Name=xapR;Dbxref=GeneID:7145340;gbkey=Gene;gene=xapR;locus_tag=EC55989_2694
NC_011748.1	RefSeq	CDS	2752622	2753506	.	-	0	ID=cds2560;Name=YP_002403707.1;Parent=gene2747;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 10400599%2C 7007808%2C 2201776%2C 7559336%3B Product type r : regulator;Dbxref=Genbank:YP_002403707.1,GeneID:7145340;gbkey=CDS;product=DNA-binding transcriptional activator XapR;protein_id=YP_002403707.1;transl_table=11
NC_011748.1	RefSeq	gene	2753758	2755014	.	-	.	ID=gene2748;Name=xapB;Dbxref=GeneID:7147984;gbkey=Gene;gene=xapB;locus_tag=EC55989_2695
NC_011748.1	RefSeq	CDS	2753758	2755014	.	-	0	ID=cds2561;Name=YP_002403708.1;Parent=gene2748;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 96032385%2C 7559336%3B Product type t : transporter;Dbxref=Genbank:YP_002403708.1,GeneID:7147984;gbkey=CDS;product=xanthosine transporter;protein_id=YP_002403708.1;transl_table=11
NC_011748.1	RefSeq	gene	2755074	2755907	.	-	.	ID=gene2749;Name=xapA;Dbxref=GeneID:7147983;gbkey=Gene;gene=xapA;locus_tag=EC55989_2696
NC_011748.1	RefSeq	CDS	2755074	2755907	.	-	0	ID=cds2562;Name=YP_002403709.1;Parent=gene2749;Note=catalyzes the formation of a purine and ribose phosphate from a purine nucleoside%3B in E. coli this enzyme functions in xanthosine degradation;Dbxref=Genbank:YP_002403709.1,GeneID:7147983;gbkey=CDS;product=purine nucleoside phosphorylase;protein_id=YP_002403709.1;transl_table=11
NC_011748.1	RefSeq	gene	2756156	2756920	.	+	.	ID=gene2750;Name=yfeN;Dbxref=GeneID:7147982;gbkey=Gene;gene=yfeN;locus_tag=EC55989_2697
NC_011748.1	RefSeq	CDS	2756156	2756920	.	+	0	ID=cds2563;Name=YP_002403710.1;Parent=gene2750;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002403710.1,GeneID:7147982;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403710.1;transl_table=11
NC_011748.1	RefSeq	gene	2756959	2757885	.	-	.	ID=gene2751;Name=yfeR;Dbxref=GeneID:7148736;gbkey=Gene;gene=yfeR;locus_tag=EC55989_2698
NC_011748.1	RefSeq	CDS	2756959	2757885	.	-	0	ID=cds2564;Name=YP_002403711.1;Parent=gene2751;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pr :  regulator;Dbxref=Genbank:YP_002403711.1,GeneID:7148736;gbkey=CDS;product=DNA-binding transcriptional regulator;protein_id=YP_002403711.1;transl_table=11
NC_011748.1	RefSeq	gene	2757975	2758973	.	+	.	ID=gene2752;Name=yfeH;Dbxref=GeneID:7148738;gbkey=Gene;gene=yfeH;locus_tag=EC55989_2699
NC_011748.1	RefSeq	CDS	2757975	2758973	.	+	0	ID=cds2565;Name=YP_002403712.1;Parent=gene2752;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002403712.1,GeneID:7148738;gbkey=CDS;product=sodium%2Fbile acid symporter family %28mazG-like%29;protein_id=YP_002403712.1;transl_table=11
NC_011748.1	RefSeq	gene	2758970	2759188	.	-	.	ID=gene2753;Name=ypeB;Dbxref=GeneID:7148734;gbkey=Gene;gene=ypeB;locus_tag=EC55989_2700
NC_011748.1	RefSeq	CDS	2758970	2759188	.	-	0	ID=cds2566;Name=YP_002403713.1;Parent=gene2753;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403713.1,GeneID:7148734;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403713.1;transl_table=11
NC_011748.1	RefSeq	gene	2759190	2761205	.	-	.	ID=gene2754;Name=ligA;Dbxref=GeneID:7149372;gbkey=Gene;gene=ligA;locus_tag=EC55989_2701
NC_011748.1	RefSeq	CDS	2759190	2761205	.	-	0	ID=cds2567;Name=YP_002403714.1;Parent=gene2754;Note=this protein catalyzes the formation of phosphodiester linkages between 5%27-phosphoryl and 3%27-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction%3B essential for DNA replication and repair of damaged DNA%3B similar to ligase LigB;Dbxref=Genbank:YP_002403714.1,GeneID:7149372;gbkey=CDS;product=NAD-dependent DNA ligase LigA;protein_id=YP_002403714.1;transl_table=11
NC_011748.1	RefSeq	gene	2761276	2762262	.	-	.	ID=gene2755;Name=zipA;Dbxref=GeneID:7146700;gbkey=Gene;gene=zipA;locus_tag=EC55989_2702
NC_011748.1	RefSeq	CDS	2761276	2762262	.	-	0	ID=cds2568;Name=YP_002403715.1;Parent=gene2755;Note=interacts with cell division protein FitsZ and may be required to anchor septal ring structure;Dbxref=Genbank:YP_002403715.1,GeneID:7146700;gbkey=CDS;product=cell division protein ZipA;protein_id=YP_002403715.1;transl_table=11
NC_011748.1	RefSeq	gene	2762492	2763253	.	+	.	ID=gene2756;Name=cysZ;Dbxref=GeneID:7149488;gbkey=Gene;gene=cysZ;locus_tag=EC55989_2703
NC_011748.1	RefSeq	CDS	2762492	2763253	.	+	0	ID=cds2569;Name=YP_002403716.1;Parent=gene2756;Note=role in sulfur assimilation;Dbxref=Genbank:YP_002403716.1,GeneID:7149488;gbkey=CDS;product=sulfate transport protein CysZ;protein_id=YP_002403716.1;transl_table=11
NC_011748.1	RefSeq	gene	2763438	2764409	.	+	.	ID=gene2757;Name=cysK;Dbxref=GeneID:7145837;gbkey=Gene;gene=cysK;locus_tag=EC55989_2704
NC_011748.1	RefSeq	CDS	2763438	2764409	.	+	0	ID=cds2570;Name=YP_002403717.1;Parent=gene2757;Note=CysK%3B forms a complex with serine acetyltransferase CysE%3B functions in cysteine biosynthesis;Dbxref=Genbank:YP_002403717.1,GeneID:7145837;gbkey=CDS;product=cysteine synthase A;protein_id=YP_002403717.1;transl_table=11
NC_011748.1	RefSeq	gene	2764793	2765050	.	+	.	ID=gene2758;Name=ptsH;Dbxref=GeneID:7145829;gbkey=Gene;gene=ptsH;locus_tag=EC55989_2705
NC_011748.1	RefSeq	CDS	2764793	2765050	.	+	0	ID=cds2571;Name=YP_002403718.1;Parent=gene2758;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B Product type t : transporter;Dbxref=Genbank:YP_002403718.1,GeneID:7145829;gbkey=CDS;product=PTS system phosphohistidinoprotein-hexose phosphotransferase Hpr;protein_id=YP_002403718.1;transl_table=11
NC_011748.1	RefSeq	gene	2765095	2766822	.	+	.	ID=gene2759;Name=ptsI;Dbxref=GeneID:7147288;gbkey=Gene;gene=ptsI;locus_tag=EC55989_2706
NC_011748.1	RefSeq	CDS	2765095	2766822	.	+	0	ID=cds2572;Name=YP_002403719.1;Parent=gene2759;Note=Phosphotransferase system%2C enzyme I%3B transfers the phosphoryl group from phosphoenolpyruvate %28PEP%29 to the phosphoryl carrier protein%3B part of the phosphoenolpyruvate-dependent sugar phosphotransferase system %28PTS%29%2C a major carbohydrate active-transport system;Dbxref=Genbank:YP_002403719.1,GeneID:7147288;gbkey=CDS;product=phosphoenolpyruvate-protein phosphotransferase;protein_id=YP_002403719.1;transl_table=11
NC_011748.1	RefSeq	gene	2766863	2767372	.	+	.	ID=gene2760;Name=crr;Dbxref=GeneID:7147289;gbkey=Gene;gene=crr;locus_tag=EC55989_2707
NC_011748.1	RefSeq	CDS	2766863	2767372	.	+	0	ID=cds2573;Name=YP_002403720.1;Parent=gene2760;Note=functions in phosphoenolpyruvate-%28PEP%29-dependent phosphotransferase %28PTS%29 system%3B functions in the transport and phosphorylation of glucose;Dbxref=Genbank:YP_002403720.1,GeneID:7147289;gbkey=CDS;product=PTS system glucose-specific transporter;protein_id=YP_002403720.1;transl_table=11
NC_011748.1	RefSeq	gene	2767414	2768265	.	-	.	ID=gene2761;Name=pdxK;Dbxref=GeneID:7145762;gbkey=Gene;gene=pdxK;locus_tag=EC55989_2708
NC_011748.1	RefSeq	CDS	2767414	2768265	.	-	0	ID=cds2574;Name=YP_002403721.1;Parent=gene2761;Note=catalyzes the formation of pyridoxal 5%27-phosphate from pyridoxal;Dbxref=Genbank:YP_002403721.1,GeneID:7145762;gbkey=CDS;product=pyridoxal kinase;protein_id=YP_002403721.1;transl_table=11
NC_011748.1	RefSeq	gene	2768370	2768738	.	+	.	ID=gene2762;Name=yfeK;Dbxref=GeneID:7147128;gbkey=Gene;gene=yfeK;locus_tag=EC55989_2709
NC_011748.1	RefSeq	CDS	2768370	2768738	.	+	0	ID=cds2575;Name=YP_002403722.1;Parent=gene2762;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403722.1,GeneID:7147128;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403722.1;transl_table=11
NC_011748.1	RefSeq	gene	2768741	2769652	.	-	.	ID=gene2763;Name=cysM;Dbxref=GeneID:7148735;gbkey=Gene;gene=cysM;locus_tag=EC55989_2710
NC_011748.1	RefSeq	CDS	2768741	2769652	.	-	0	ID=cds2576;Name=YP_002403723.1;Parent=gene2763;Note=catalyzes the formation of cysteine from 3-O-acetyl-L-serine and hydrogen sulfide;Dbxref=Genbank:YP_002403723.1,GeneID:7148735;gbkey=CDS;product=cysteine synthase B;protein_id=YP_002403723.1;transl_table=11
NC_011748.1	RefSeq	gene	2769786	2770883	.	-	.	ID=gene2764;Name=cysA;Dbxref=GeneID:7145830;gbkey=Gene;gene=cysA;locus_tag=EC55989_2711
NC_011748.1	RefSeq	CDS	2769786	2770883	.	-	0	ID=cds2577;Name=YP_002403724.1;Parent=gene2764;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 90202710%2C 90264334%2C 2188958%2C 7665461%3B Product type t : transporter;Dbxref=Genbank:YP_002403724.1,GeneID:7145830;gbkey=CDS;product=sulfate%2Fthiosulfate transporter subunit;protein_id=YP_002403724.1;transl_table=11
NC_011748.1	RefSeq	gene	2770873	2771748	.	-	.	ID=gene2765;Name=cysW;Dbxref=GeneID:7145820;gbkey=Gene;gene=cysW;locus_tag=EC55989_2712
NC_011748.1	RefSeq	CDS	2770873	2771748	.	-	0	ID=cds2578;Name=YP_002403725.1;Parent=gene2765;Note=Part of the ABC transporter complex cysAWTP involved in sulfate%2Fthiosulfate import;Dbxref=Genbank:YP_002403725.1,GeneID:7145820;gbkey=CDS;product=sulfate%2Fthiosulfate transporter permease subunit;protein_id=YP_002403725.1;transl_table=11
NC_011748.1	RefSeq	gene	2771748	2772581	.	-	.	ID=gene2766;Name=cysU;Dbxref=GeneID:7145836;gbkey=Gene;gene=cysU;locus_tag=EC55989_2713
NC_011748.1	RefSeq	CDS	2771748	2772581	.	-	0	ID=cds2579;Name=YP_002403726.1;Parent=gene2766;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 90264334%2C 2188958%3B Product type t : transporter;Dbxref=Genbank:YP_002403726.1,GeneID:7145836;gbkey=CDS;product=sulfate%2Fthiosulfate transporter subunit;protein_id=YP_002403726.1;transl_table=11
NC_011748.1	RefSeq	gene	2772581	2773597	.	-	.	ID=gene2767;Name=cysP;Dbxref=GeneID:7145835;gbkey=Gene;gene=cysP;locus_tag=EC55989_2714
NC_011748.1	RefSeq	CDS	2772581	2773597	.	-	0	ID=cds2580;Name=YP_002403727.1;Parent=gene2767;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 90264335%2C 2188959%2C 9298646%3B Product type t : transporter;Dbxref=Genbank:YP_002403727.1,GeneID:7145835;gbkey=CDS;product=thiosulfate transporter subunit;protein_id=YP_002403727.1;transl_table=11
NC_011748.1	RefSeq	gene	2773768	2774559	.	-	.	ID=gene2768;Name=ucpA;Dbxref=GeneID:7145832;gbkey=Gene;gene=ucpA;locus_tag=EC55989_2715
NC_011748.1	RefSeq	CDS	2773768	2774559	.	-	0	ID=cds2581;Name=YP_002403728.1;Parent=gene2768;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 97385354%2C 2188959%2C 7984428%2C 9241368%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002403728.1,GeneID:7145832;gbkey=CDS;product=short chain dehydrogenase;protein_id=YP_002403728.1;transl_table=11
NC_011748.1	RefSeq	gene	2774688	2775545	.	-	.	ID=gene2769;Name=yfeT;Dbxref=GeneID:7147896;gbkey=Gene;gene=yfeT;locus_tag=EC55989_2716
NC_011748.1	RefSeq	CDS	2774688	2775545	.	-	0	ID=cds2582;Name=YP_002403729.1;Parent=gene2769;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pr :  regulator;Dbxref=Genbank:YP_002403729.1,GeneID:7147896;gbkey=CDS;product=DNA-binding transcriptional regulator;protein_id=YP_002403729.1;transl_table=11
NC_011748.1	RefSeq	gene	2775709	2776605	.	+	.	ID=gene2770;Name=murQ;Dbxref=GeneID:7148739;gbkey=Gene;gene=murQ;locus_tag=EC55989_2717
NC_011748.1	RefSeq	CDS	2775709	2776605	.	+	0	ID=cds2583;Name=YP_002403730.1;Parent=gene2770;Note=catalyzes the cleavage of the lactyl ether moiety of N-acetylmuramic acid-6-phosphate %28MurNAc-6-P%29 to form N-acetylglucosamine-6-phosphate %28GlcNAc-6-P%29 and lactate%3B involved in MurNAc dissimilation pathway;Dbxref=Genbank:YP_002403730.1,GeneID:7148739;gbkey=CDS;product=N-acetylmuramic acid 6-phosphate etherase;protein_id=YP_002403730.1;transl_table=11
NC_011748.1	RefSeq	gene	2776609	2778033	.	+	.	ID=gene2771;Name=murP;Dbxref=GeneID:7148740;gbkey=Gene;gene=murP;locus_tag=EC55989_2718
NC_011748.1	RefSeq	CDS	2776609	2778033	.	+	0	ID=cds2584;Name=YP_002403731.1;Parent=gene2771;Note=belongs to PEP-dependent PTS system%3B contains the PTS EIIBC domains%3B involved in uptake of exogenous N-acetylmuramic acid %28MurNAc%29%3B requires crr-encoded enzyme IIA-glucose component;Dbxref=Genbank:YP_002403731.1,GeneID:7148740;gbkey=CDS;product=PTS system N-acetylmuramic acid transporter subunit IIBC;protein_id=YP_002403731.1;transl_table=11
NC_011748.1	RefSeq	gene	2778038	2779342	.	+	.	ID=gene2772;Name=murQ;Dbxref=GeneID:7146929;gbkey=Gene;gene=murQ;locus_tag=EC55989_2719
NC_011748.1	RefSeq	CDS	2778038	2779342	.	+	0	ID=cds2585;Name=YP_002403732.1;Parent=gene2772;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 15983044%2C 15060041%3B Product type e : enzyme;Dbxref=Genbank:YP_002403732.1,GeneID:7146929;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403732.1;transl_table=11
NC_011748.1	RefSeq	gene	2779398	2780297	.	-	.	ID=gene2773;Name=yfeX;Dbxref=GeneID:7146930;gbkey=Gene;gene=yfeX;locus_tag=EC55989_2720
NC_011748.1	RefSeq	CDS	2779398	2780297	.	-	0	ID=cds2586;Name=YP_002403733.1;Parent=gene2773;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403733.1,GeneID:7146930;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403733.1;transl_table=11
NC_011748.1	RefSeq	gene	2780393	2780968	.	-	.	ID=gene2774;Name=yfeY;Dbxref=GeneID:7148741;gbkey=Gene;gene=yfeY;locus_tag=EC55989_2721
NC_011748.1	RefSeq	CDS	2780393	2780968	.	-	0	ID=cds2587;Name=YP_002403734.1;Parent=gene2774;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 12900013%2C 7764507;Dbxref=Genbank:YP_002403734.1,GeneID:7148741;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403734.1;transl_table=11
NC_011748.1	RefSeq	gene	2781029	2781478	.	-	.	ID=gene2775;Name=yfeZ;Dbxref=GeneID:7148742;gbkey=Gene;gene=yfeZ;locus_tag=EC55989_2722
NC_011748.1	RefSeq	CDS	2781029	2781478	.	-	0	ID=cds2588;Name=YP_002403735.1;Parent=gene2775;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002403735.1,GeneID:7148742;gbkey=CDS;product=inner membrane protein;protein_id=YP_002403735.1;transl_table=11
NC_011748.1	RefSeq	gene	2781465	2781890	.	-	.	ID=gene2776;Name=ypeA;Dbxref=GeneID:7148743;gbkey=Gene;gene=ypeA;locus_tag=EC55989_2723
NC_011748.1	RefSeq	CDS	2781465	2781890	.	-	0	ID=cds2589;Name=YP_002403736.1;Parent=gene2776;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002403736.1,GeneID:7148743;gbkey=CDS;product=acetyltransferase;protein_id=YP_002403736.1;transl_table=11
NC_011748.1	RefSeq	gene	2782104	2782973	.	+	.	ID=gene2777;Name=amiA;Dbxref=GeneID:7149371;gbkey=Gene;gene=amiA;locus_tag=EC55989_2724
NC_011748.1	RefSeq	CDS	2782104	2782973	.	+	0	ID=cds2590;Name=YP_002403737.1;Parent=gene2777;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 21348478%2C 6137479%2C 87242501%2C 1903834%2C 8300522%3B Product type e : enzyme;Dbxref=Genbank:YP_002403737.1,GeneID:7149371;gbkey=CDS;product=N-acetylmuramoyl-l-alanine amidase I;protein_id=YP_002403737.1;transl_table=11
NC_011748.1	RefSeq	gene	2782977	2783876	.	+	.	ID=gene2778;Name=hemF;Dbxref=GeneID:7145490;gbkey=Gene;gene=hemF;locus_tag=EC55989_2725
NC_011748.1	RefSeq	CDS	2782977	2783876	.	+	0	ID=cds2591;Name=YP_002403738.1;Parent=gene2778;Note=catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis;Dbxref=Genbank:YP_002403738.1,GeneID:7145490;gbkey=CDS;product=coproporphyrinogen III oxidase;protein_id=YP_002403738.1;transl_table=11
NC_011748.1	RefSeq	gene	2783882	2784934	.	-	.	ID=gene2779;Name=yfeG;Dbxref=GeneID:7146412;gbkey=Gene;gene=yfeG;locus_tag=EC55989_2726
NC_011748.1	RefSeq	CDS	2783882	2784934	.	-	0	ID=cds2592;Name=YP_002403739.1;Parent=gene2779;Note=activates the transcription of the ethanolamine utilization operon;Dbxref=Genbank:YP_002403739.1,GeneID:7146412;gbkey=CDS;product=transcriptional regulator EutR;protein_id=YP_002403739.1;transl_table=11
NC_011748.1	RefSeq	gene	2784980	2785480	.	-	.	ID=gene2780;Name=yffI;Dbxref=GeneID:7148733;gbkey=Gene;gene=yffI;locus_tag=EC55989_2727
NC_011748.1	RefSeq	CDS	2784980	2785480	.	-	0	ID=cds2593;Name=YP_002403740.1;Parent=gene2780;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 10464203%3B Product type ps :  structure;Dbxref=Genbank:YP_002403740.1,GeneID:7148733;gbkey=CDS;product=ethanolaminosome structural protein with role in ethanolamine utilization;protein_id=YP_002403740.1;transl_table=11
NC_011748.1	RefSeq	gene	2785493	2786152	.	-	.	ID=gene2781;Name=eutL;Dbxref=GeneID:7148746;gbkey=Gene;gene=eutL;locus_tag=EC55989_2728
NC_011748.1	RefSeq	CDS	2785493	2786152	.	-	0	ID=cds2594;Name=YP_002403741.1;Parent=gene2781;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 16291677%2C 10464203%3B Product type ps :  structure;Dbxref=Genbank:YP_002403741.1,GeneID:7148746;gbkey=CDS;product=carboxysome-related structural protein with role in ethanolamine utilization;protein_id=YP_002403741.1;transl_table=11
NC_011748.1	RefSeq	gene	2786162	2787049	.	-	.	ID=gene2782;Name=eutC;Dbxref=GeneID:7146034;gbkey=Gene;gene=eutC;locus_tag=EC55989_2729
NC_011748.1	RefSeq	CDS	2786162	2787049	.	-	0	ID=cds2595;Name=YP_002403742.1;Parent=gene2782;Note=catalyzes the formation of acetaldehyde from ethanolamine;Dbxref=Genbank:YP_002403742.1,GeneID:7146034;gbkey=CDS;product=ethanolamine ammonia-lyase small subunit;protein_id=YP_002403742.1;transl_table=11
NC_011748.1	RefSeq	gene	2787070	2788431	.	-	.	ID=gene2783;Name=eutB;Dbxref=GeneID:7146028;gbkey=Gene;gene=eutB;locus_tag=EC55989_2730
NC_011748.1	RefSeq	CDS	2787070	2788431	.	-	0	ID=cds2596;Name=YP_002403743.1;Parent=gene2783;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 3905806%2C 10464203%3B Product type e : enzyme;Dbxref=Genbank:YP_002403743.1,GeneID:7146028;gbkey=CDS;product=ethanolamine ammonia-lyase%2C large subunit%2C heavy chain;protein_id=YP_002403743.1;transl_table=11
NC_011748.1	RefSeq	gene	2788443	2789846	.	-	.	ID=gene2784;Name=eutA;Dbxref=GeneID:7146027;gbkey=Gene;gene=eutA;locus_tag=EC55989_2731
NC_011748.1	RefSeq	CDS	2788443	2789846	.	-	0	ID=cds2597;Name=YP_002403744.1;Parent=gene2784;Note=ethanolamine utilization protein EutA;Dbxref=Genbank:YP_002403744.1,GeneID:7146027;gbkey=CDS;product=reactivating factor for ethanolamine ammonia lyase;protein_id=YP_002403744.1;transl_table=11
NC_011748.1	RefSeq	gene	2789843	2791069	.	-	.	ID=gene2785;Name=eutH;Dbxref=GeneID:7146026;gbkey=Gene;gene=eutH;locus_tag=EC55989_2732
NC_011748.1	RefSeq	CDS	2789843	2791069	.	-	0	ID=cds2598;Name=YP_002403745.1;Parent=gene2785;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 7868611%2C 10464203%3B Product type pt :  transporter;Dbxref=Genbank:YP_002403745.1,GeneID:7146026;gbkey=CDS;product=ethanolamine transporter;protein_id=YP_002403745.1;transl_table=11
NC_011748.1	RefSeq	gene	2791386	2792573	.	-	.	ID=gene2786;Name=eutG;Dbxref=GeneID:7146031;gbkey=Gene;gene=eutG;locus_tag=EC55989_2733
NC_011748.1	RefSeq	CDS	2791386	2792573	.	-	0	ID=cds2599;Name=YP_002403746.1;Parent=gene2786;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 16291677%2C 10464203%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002403746.1,GeneID:7146031;gbkey=CDS;product=alcohol dehydrogenase in ethanolamine utilization%3B ethanolaminosome;protein_id=YP_002403746.1;transl_table=11
NC_011748.1	RefSeq	gene	2792563	2793399	.	-	.	ID=gene2787;Name=eutJ;Dbxref=GeneID:7146030;gbkey=Gene;gene=eutJ;locus_tag=EC55989_2734
NC_011748.1	RefSeq	CDS	2792563	2793399	.	-	0	ID=cds2600;Name=YP_002403747.1;Parent=gene2787;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 16291677%2C 10464203%3B Product type pf :  factor;Dbxref=Genbank:YP_002403747.1,GeneID:7146030;gbkey=CDS;product=chaperonin%2C ethanolamine utilization protein;protein_id=YP_002403747.1;transl_table=11
NC_011748.1	RefSeq	gene	2793410	2794813	.	-	.	ID=gene2788;Name=eutE;Dbxref=GeneID:7146033;gbkey=Gene;gene=eutE;locus_tag=EC55989_2735
NC_011748.1	RefSeq	CDS	2793410	2794813	.	-	0	ID=cds2601;Name=YP_002403748.1;Parent=gene2788;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 16291677%2C 10464203%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002403748.1,GeneID:7146033;gbkey=CDS;product=aldehyde dehydrogenase%2C ethanolamine utilization protein;protein_id=YP_002403748.1;transl_table=11
NC_011748.1	RefSeq	gene	2794825	2795112	.	-	.	ID=gene2789;Name=cchB;Dbxref=GeneID:7146029;gbkey=Gene;gene=cchB;locus_tag=EC55989_2736
NC_011748.1	RefSeq	CDS	2794825	2795112	.	-	0	ID=cds2602;Name=YP_002403749.1;Parent=gene2789;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 16291677%2C 10464203%3B Product type ps :  structure;Dbxref=Genbank:YP_002403749.1,GeneID:7146029;gbkey=CDS;product=carboxysome-like ethanolaminosome structural protein%2C ethanolamine utilization protein;protein_id=YP_002403749.1;transl_table=11
NC_011748.1	RefSeq	gene	2795219	2795512	.	-	.	ID=gene2790;Name=cchA;Dbxref=GeneID:7145673;gbkey=Gene;gene=cchA;locus_tag=EC55989_2737
NC_011748.1	RefSeq	CDS	2795219	2795512	.	-	0	ID=cds2603;Name=YP_002403750.1;Parent=gene2790;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 16291677%2C 10464203%3B Product type ps :  structure;Dbxref=Genbank:YP_002403750.1,GeneID:7145673;gbkey=CDS;product=carboxysome-like ethanolaminosome structural protein%2C ethanolamine utilization protein;protein_id=YP_002403750.1;transl_table=11
NC_011748.1	RefSeq	gene	2795551	2796567	.	-	.	ID=gene2791;Name=eutD;Dbxref=GeneID:7145672;gbkey=Gene;gene=eutD;locus_tag=EC55989_2738
NC_011748.1	RefSeq	CDS	2795551	2796567	.	-	0	ID=cds2604;Name=YP_002403751.1;Parent=gene2791;Note=in Salmonella this enzyme is required for ethanolamine catabolism%3B has higher affinity for CoA than Pta;Dbxref=Genbank:YP_002403751.1,GeneID:7145672;gbkey=CDS;product=phosphotransacetylase;protein_id=YP_002403751.1;transl_table=11
NC_011748.1	RefSeq	gene	2796564	2797367	.	-	.	ID=gene2792;Name=eutT;Dbxref=GeneID:7146032;gbkey=Gene;gene=eutT;locus_tag=EC55989_2739
NC_011748.1	RefSeq	CDS	2796564	2797367	.	-	0	ID=cds2605;Name=YP_002403752.1;Parent=gene2792;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 16291677%2C 10464203%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002403752.1,GeneID:7146032;gbkey=CDS;product=cobalamin adenosyltransferase in ethanolamine utilization;protein_id=YP_002403752.1;transl_table=11
NC_011748.1	RefSeq	gene	2797364	2798065	.	-	.	ID=gene2793;Name=eutQ;Dbxref=GeneID:7146037;gbkey=Gene;gene=eutQ;locus_tag=EC55989_2740
NC_011748.1	RefSeq	CDS	2797364	2798065	.	-	0	ID=cds2606;Name=YP_002403753.1;Parent=gene2793;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 10464203;Dbxref=Genbank:YP_002403753.1,GeneID:7146037;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403753.1;transl_table=11
NC_011748.1	RefSeq	gene	2798040	2798519	.	-	.	ID=gene2794;Name=eutP;Dbxref=GeneID:7146036;gbkey=Gene;gene=eutP;locus_tag=EC55989_2741
NC_011748.1	RefSeq	CDS	2798040	2798519	.	-	0	ID=cds2607;Name=YP_002403754.1;Parent=gene2794;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 16291677%2C 10464203%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002403754.1,GeneID:7146036;gbkey=CDS;product=nucleoside triphosphate hydrolase domain protein;protein_id=YP_002403754.1;transl_table=11
NC_011748.1	RefSeq	gene	2798532	2798867	.	-	.	ID=gene2795;Name=ypfE;Dbxref=GeneID:7146035;gbkey=Gene;gene=ypfE;locus_tag=EC55989_2742
NC_011748.1	RefSeq	CDS	2798532	2798867	.	-	0	ID=cds2608;Name=YP_002403755.1;Parent=gene2795;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 16291677%2C 10464203%3B Product type ps :  structure;Dbxref=Genbank:YP_002403755.1,GeneID:7146035;gbkey=CDS;product=carboxysome-like ethanolaminosome structural protein with role in ethanol utilization;protein_id=YP_002403755.1;transl_table=11
NC_011748.1	RefSeq	gene	2799160	2801439	.	-	.	ID=gene2796;Name=maeB;Dbxref=GeneID:7149374;gbkey=Gene;gene=maeB;locus_tag=EC55989_2743
NC_011748.1	RefSeq	CDS	2799160	2801439	.	-	0	ID=cds2609;Name=YP_002403756.1;Parent=gene2796;Note=NADP-dependent%3B catalyzes the oxidative decarboxylation of malate to form pyruvate%3B decarboxylates oxaloacetate;Dbxref=Genbank:YP_002403756.1,GeneID:7149374;gbkey=CDS;product=malic enzyme;protein_id=YP_002403756.1;transl_table=11
NC_011748.1	RefSeq	gene	2801728	2802678	.	+	.	ID=gene2797;Name=talA;Dbxref=GeneID:7146766;gbkey=Gene;gene=talA;locus_tag=EC55989_2744
NC_011748.1	RefSeq	CDS	2801728	2802678	.	+	0	ID=cds2610;Name=YP_002403757.1;Parent=gene2797;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 90230300%3B Product type e : enzyme;Dbxref=Genbank:YP_002403757.1,GeneID:7146766;gbkey=CDS;product=transaldolase A;protein_id=YP_002403757.1;transl_table=11
NC_011748.1	RefSeq	gene	2802698	2804701	.	+	.	ID=gene2798;Name=tktB;Dbxref=GeneID:7147747;gbkey=Gene;gene=tktB;locus_tag=EC55989_2745
NC_011748.1	RefSeq	CDS	2802698	2804701	.	+	0	ID=cds2611;Name=YP_002403758.1;Parent=gene2798;Note=catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate%3B can transfer ketol groups between several groups%3B in Escherichia coli there are two tkt genes%2C tktA expressed during exponential growth and the tktB during stationary phase;Dbxref=Genbank:YP_002403758.1,GeneID:7147747;gbkey=CDS;product=transketolase;protein_id=YP_002403758.1;transl_table=11
NC_011748.1	RefSeq	gene	2804797	2805840	.	-	.	ID=gene2799;Name=ypfG;Dbxref=GeneID:7147805;gbkey=Gene;gene=ypfG;locus_tag=EC55989_2746
NC_011748.1	RefSeq	CDS	2804797	2805840	.	-	0	ID=cds2612;Name=YP_002403759.1;Parent=gene2799;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403759.1,GeneID:7147805;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403759.1;transl_table=11
NC_011748.1	RefSeq	gene	2805966	2806541	.	-	.	ID=gene2800;Name=yffH;Dbxref=GeneID:7149375;gbkey=Gene;gene=yffH;locus_tag=EC55989_2747
NC_011748.1	RefSeq	CDS	2805966	2806541	.	-	0	ID=cds2613;Name=YP_002403760.1;Parent=gene2800;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002403760.1,GeneID:7149375;gbkey=CDS;product=NUDIX hydrolase;protein_id=YP_002403760.1;transl_table=11
NC_011748.1	RefSeq	gene	2806609	2808588	.	-	.	ID=gene2801;Name=aegA;Dbxref=GeneID:7148745;gbkey=Gene;gene=aegA;locus_tag=EC55989_2748
NC_011748.1	RefSeq	CDS	2806609	2808588	.	-	0	ID=cds2614;Name=YP_002403761.1;Parent=gene2801;Note=unknown function%3B in E. coli the aegA gene is regulated by Fnr%2C NarXL%2C and NarQ %28but not ArcA%29%2C induced under anaerobic conditions and repressed in the presence of nitrate %28anaerobic%29;Dbxref=Genbank:YP_002403761.1,GeneID:7148745;gbkey=CDS;product=oxidoreductase Fe-S binding subunit;protein_id=YP_002403761.1;transl_table=11
NC_011748.1	RefSeq	gene	2808794	2810494	.	+	.	ID=gene2802;Name=narQ;Dbxref=GeneID:7145462;gbkey=Gene;gene=narQ;locus_tag=EC55989_2749
NC_011748.1	RefSeq	CDS	2808794	2810494	.	+	0	ID=cds2615;Name=YP_002403762.1;Parent=gene2802;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 92374842%2C 1508040%2C 1528845%3B Product type r : regulator;Dbxref=Genbank:YP_002403762.1,GeneID:7145462;gbkey=CDS;product=nitrate%2Fnitrite sensor protein NarQ;protein_id=YP_002403762.1;transl_table=11
NC_011748.1	RefSeq	gene	2810658	2813771	.	+	.	ID=gene2803;Name=acrD;Dbxref=GeneID:7146974;gbkey=Gene;gene=acrD;locus_tag=EC55989_2750
NC_011748.1	RefSeq	CDS	2810658	2813771	.	+	0	ID=cds2616;Name=YP_002403763.1;Parent=gene2803;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 12426336%2C 20158894%2C 21450803%2C 79216220%2C 10692383%2C 1644752%3B Product type t : transporter;Dbxref=Genbank:YP_002403763.1,GeneID:7146974;gbkey=CDS;product=aminoglycoside%2Fmultidrug efflux system;protein_id=YP_002403763.1;transl_table=11
NC_011748.1	RefSeq	gene	2814310	2814666	.	+	.	ID=gene2804;Name=yffB;Dbxref=GeneID:7145446;gbkey=Gene;gene=yffB;locus_tag=EC55989_2751
NC_011748.1	RefSeq	CDS	2814310	2814666	.	+	0	ID=cds2617;Name=YP_002403764.1;Parent=gene2804;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403764.1,GeneID:7145446;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403764.1;transl_table=11
NC_011748.1	RefSeq	gene	2814670	2815797	.	+	.	ID=gene2805;Name=dapE;Dbxref=GeneID:7148744;gbkey=Gene;gene=dapE;locus_tag=EC55989_2752
NC_011748.1	RefSeq	CDS	2814670	2815797	.	+	0	ID=cds2618;Name=YP_002403765.1;Parent=gene2805;Note=dapE-encoded N-succinyl-L%2CL-diaminopimelic acid desuccinylase %28DapE%29%2C catalyzes the hydrolysis of N-succinyl-L%2CLdiaminopimelate L%2CL-SDAP to L%2CL-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica.;Dbxref=Genbank:YP_002403765.1,GeneID:7148744;gbkey=CDS;product=succinyl-diaminopimelate desuccinylase;protein_id=YP_002403765.1;transl_table=11
NC_011748.1	RefSeq	gene	2815825	2816025	.	+	.	ID=gene2806;Name=ypfN;Dbxref=GeneID:7145852;gbkey=Gene;gene=ypfN;locus_tag=EC55989_2753
NC_011748.1	RefSeq	CDS	2815825	2816025	.	+	0	ID=cds2619;Name=YP_002403766.1;Parent=gene2806;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403766.1,GeneID:7145852;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403766.1;transl_table=11
NC_011748.1	RefSeq	gene	2816135	2816833	.	-	.	ID=gene2807;Name=ypfH;Dbxref=GeneID:7149379;gbkey=Gene;gene=ypfH;locus_tag=EC55989_2754
NC_011748.1	RefSeq	CDS	2816135	2816833	.	-	0	ID=cds2620;Name=YP_002403767.1;Parent=gene2807;Note=Displays esterase activity toward palmitoyl-CoA and pNP-butyrate;Dbxref=Genbank:YP_002403767.1,GeneID:7149379;gbkey=CDS;product=esterase YpfH;protein_id=YP_002403767.1;transl_table=11
NC_011748.1	RefSeq	gene	2816907	2818922	.	-	.	ID=gene2808;Name=ypfI;Dbxref=GeneID:7149376;gbkey=Gene;gene=ypfI;locus_tag=EC55989_2755
NC_011748.1	RefSeq	CDS	2816907	2818922	.	-	0	ID=cds2621;Name=YP_002403768.1;Parent=gene2808;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002403768.1,GeneID:7149376;gbkey=CDS;product=hydrolase;protein_id=YP_002403768.1;transl_table=11
NC_011748.1	RefSeq	gene	2818937	2819800	.	-	.	ID=gene2809;Name=ypfJ;Dbxref=GeneID:7149377;gbkey=Gene;gene=ypfJ;locus_tag=EC55989_2756
NC_011748.1	RefSeq	CDS	2818937	2819800	.	-	0	ID=cds2622;Name=YP_002403769.1;Parent=gene2809;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403769.1,GeneID:7149377;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403769.1;transl_table=11
NC_011748.1	RefSeq	gene	2819947	2820345	.	-	.	ID=gene2810;Name=EC55989_2757;Dbxref=GeneID:7149378;gbkey=Gene;locus_tag=EC55989_2757
NC_011748.1	RefSeq	CDS	2819947	2820345	.	-	0	ID=cds2623;Name=YP_002403770.1;Parent=gene2810;Note=stability determinant protein;Dbxref=Genbank:YP_002403770.1,GeneID:7149378;gbkey=CDS;product=plasmid maintenance protein;protein_id=YP_002403770.1;transl_table=11
NC_011748.1	RefSeq	gene	2820345	2820611	.	-	.	ID=gene2811;Name=EC55989_2758;Dbxref=GeneID:7144827;gbkey=Gene;locus_tag=EC55989_2758
NC_011748.1	RefSeq	CDS	2820345	2820611	.	-	0	ID=cds2624;Name=YP_002403771.1;Parent=gene2811;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403771.1,GeneID:7144827;gbkey=CDS;product=transcriptionnal regulation protein;protein_id=YP_002403771.1;transl_table=11
NC_011748.1	RefSeq	gene	2820727	2821440	.	-	.	ID=gene2812;Name=purC;Dbxref=GeneID:7144828;gbkey=Gene;gene=purC;locus_tag=EC55989_2759
NC_011748.1	RefSeq	CDS	2820727	2821440	.	-	0	ID=cds2625;Name=YP_002403772.1;Parent=gene2812;Note=catalyzes the formation of %28S%29-2-%285-amino-1-%285-phospho-D-ribosyl%29imidazole-4-carboxamido%29succinate from 5-amino-1-%285-phospho-D-ribosyl%29imidazole-4-carboxylate and L-aspartate in purine biosynthesis%3B SAICAR synthase;Dbxref=Genbank:YP_002403772.1,GeneID:7144828;gbkey=CDS;product=phosphoribosylaminoimidazole-succinocarboxamide synthase;protein_id=YP_002403772.1;transl_table=11
NC_011748.1	RefSeq	gene	2821653	2822687	.	-	.	ID=gene2813;Name=nlpB;Dbxref=GeneID:7147294;gbkey=Gene;gene=nlpB;locus_tag=EC55989_2760
NC_011748.1	RefSeq	CDS	2821653	2822687	.	-	0	ID=cds2626;Name=YP_002403773.1;Parent=gene2813;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 91358331%2C 1885529%2C 2120198%3B Product type lp : lipoprotein;Dbxref=Genbank:YP_002403773.1,GeneID:7147294;gbkey=CDS;product=lipoprotein;protein_id=YP_002403773.1;transl_table=11
NC_011748.1	RefSeq	gene	2822704	2823582	.	-	.	ID=gene2814;Name=dapA;Dbxref=GeneID:7147007;gbkey=Gene;gene=dapA;locus_tag=EC55989_2761
NC_011748.1	RefSeq	CDS	2822704	2823582	.	-	0	ID=cds2627;Name=YP_002403774.1;Parent=gene2814;Note=catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis;Dbxref=Genbank:YP_002403774.1,GeneID:7147007;gbkey=CDS;product=dihydrodipicolinate synthase;protein_id=YP_002403774.1;transl_table=11
NC_011748.1	RefSeq	gene	2823728	2824300	.	+	.	ID=gene2815;Name=gcvR;Dbxref=GeneID:7145849;gbkey=Gene;gene=gcvR;locus_tag=EC55989_2762
NC_011748.1	RefSeq	CDS	2823728	2824300	.	+	0	ID=cds2628;Name=YP_002403775.1;Parent=gene2815;Note=negative transcriptional regulator of the gcvTHP operon;Dbxref=Genbank:YP_002403775.1,GeneID:7145849;gbkey=CDS;product=glycine cleavage system transcriptional repressor;protein_id=YP_002403775.1;transl_table=11
NC_011748.1	RefSeq	gene	2824300	2824770	.	+	.	ID=gene2816;Name=bcp;Dbxref=GeneID:7146278;gbkey=Gene;gene=bcp;locus_tag=EC55989_2763
NC_011748.1	RefSeq	CDS	2824300	2824770	.	+	0	ID=cds2629;Name=YP_002403776.1;Parent=gene2816;Note=bacterioferritin comigratory protein%3B thiol peroxidase%3B thioredoxin-dependent%3B hydroperoxide peroxidase%3B in Escherichia coli this enzyme preferentially reduces linoleic acid hydroperoxide%3B contains an active site cysteine;Dbxref=Genbank:YP_002403776.1,GeneID:7146278;gbkey=CDS;product=thioredoxin-dependent thiol peroxidase;protein_id=YP_002403776.1;transl_table=11
NC_011748.1	RefSeq	gene	2825023	2825640	.	+	.	ID=gene2817;Name=hyfA;Dbxref=GeneID:7145600;gbkey=Gene;gene=hyfA;locus_tag=EC55989_2764
NC_011748.1	RefSeq	CDS	2825023	2825640	.	+	0	ID=cds2630;Name=YP_002403777.1;Parent=gene2817;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 9387241%2C 2016588%3B Product type c : carrier;Dbxref=Genbank:YP_002403777.1,GeneID:7145600;gbkey=CDS;product=hydrogenase 4%2C 4Fe-4S subunit;protein_id=YP_002403777.1;transl_table=11
NC_011748.1	RefSeq	gene	2825640	2827658	.	+	.	ID=gene2818;Name=hyfB;Dbxref=GeneID:7146506;gbkey=Gene;gene=hyfB;locus_tag=EC55989_2765
NC_011748.1	RefSeq	CDS	2825640	2827658	.	+	0	ID=cds2631;Name=YP_002403778.1;Parent=gene2818;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 9387241%3B Product type m : membrane component;Dbxref=Genbank:YP_002403778.1,GeneID:7146506;gbkey=CDS;product=hydrogenase 4 subunit B;protein_id=YP_002403778.1;transl_table=11
NC_011748.1	RefSeq	gene	2827648	2828427	.	+	.	ID=gene2819;Name=hyfC;Dbxref=GeneID:7146507;gbkey=Gene;gene=hyfC;locus_tag=EC55989_2766;pseudo=true
NC_011748.1	RefSeq	region	2827648	2828427	.	+	.	ID=id217;Note=fragment of hydrogenase 4%2C membrane subunit %28part 1%29%3BEvidence 7 : Gene remnant%3B Product type m : membrane component;Dbxref=GeneID:7146507;gbkey=misc_feature
NC_011748.1	RefSeq	gene	2828482	2828616	.	+	.	ID=gene2820;Name=hyfC;Dbxref=GeneID:7146508;gbkey=Gene;gene=hyfC;locus_tag=EC55989_2767;pseudo=true
NC_011748.1	RefSeq	region	2828482	2828616	.	+	.	ID=id218;Note=fragment of hydrogenase 4%2C membrane subunit %28part 2%29%3BEvidence 7 : Gene remnant%3B Product type m : membrane component;Dbxref=GeneID:7146508;gbkey=misc_feature
NC_011748.1	RefSeq	gene	2828633	2829088	.	+	.	ID=gene2821;Name=hyfD;Dbxref=GeneID:7146509;gbkey=Gene;gene=hyfD;locus_tag=EC55989_2768;pseudo=true
NC_011748.1	RefSeq	region	2828633	2829088	.	+	.	ID=id219;Note=fragment of hydrogenase 4%2C membrane subunit %28part 1%29%3BEvidence 7 : Gene remnant%3B Product type m : membrane component;Dbxref=GeneID:7146509;gbkey=misc_feature
NC_011748.1	RefSeq	gene	2829085	2830071	.	+	.	ID=gene2822;Name=hyfD;Dbxref=GeneID:7146510;gbkey=Gene;gene=hyfD;locus_tag=EC55989_2769;pseudo=true
NC_011748.1	RefSeq	region	2829085	2830071	.	+	.	ID=id220;Note=fragment of hydrogenase 4%2C membrane subunit %28part 2%29%3BEvidence 7 : Gene remnant%3B Product type m : membrane component;Dbxref=GeneID:7146510;gbkey=misc_feature
NC_011748.1	RefSeq	gene	2830083	2830733	.	+	.	ID=gene2823;Name=hyfE;Dbxref=GeneID:7146511;gbkey=Gene;gene=hyfE;locus_tag=EC55989_2770
NC_011748.1	RefSeq	CDS	2830083	2830733	.	+	0	ID=cds2632;Name=YP_002403779.1;Parent=gene2823;Note=interacts with formate dehydrogenase to produce an active formate hydrogenlyase complex which cleaves formate to dihydrogen and carbon dioxide;Dbxref=Genbank:YP_002403779.1,GeneID:7146511;gbkey=CDS;product=hydrogenase 4 membrane subunit;protein_id=YP_002403779.1;transl_table=11
NC_011748.1	RefSeq	gene	2830738	2832318	.	+	.	ID=gene2824;Name=hyfF;Dbxref=GeneID:7146512;gbkey=Gene;gene=hyfF;locus_tag=EC55989_2771
NC_011748.1	RefSeq	CDS	2830738	2832318	.	+	0	ID=cds2633;Name=YP_002403780.1;Parent=gene2824;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 9387241%3B Product type m : membrane component;Dbxref=Genbank:YP_002403780.1,GeneID:7146512;gbkey=CDS;product=hydrogenase 4 subunit F;protein_id=YP_002403780.1;transl_table=11
NC_011748.1	RefSeq	gene	2832356	2834023	.	+	.	ID=gene2825;Name=hyfG;Dbxref=GeneID:7146513;gbkey=Gene;gene=hyfG;locus_tag=EC55989_2772
NC_011748.1	RefSeq	CDS	2832356	2834023	.	+	0	ID=cds2634;Name=YP_002403781.1;Parent=gene2825;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 9387241%3B Product type c : carrier;Dbxref=Genbank:YP_002403781.1,GeneID:7146513;gbkey=CDS;product=hydrogenase 4 subunit;protein_id=YP_002403781.1;transl_table=11
NC_011748.1	RefSeq	gene	2834033	2834572	.	+	.	ID=gene2826;Name=hyfH;Dbxref=GeneID:7146514;gbkey=Gene;gene=hyfH;locus_tag=EC55989_2773
NC_011748.1	RefSeq	CDS	2834033	2834572	.	+	0	ID=cds2635;Name=YP_002403782.1;Parent=gene2826;Note=probable electron transfer protein for hydrogenase 4%3B hydrogenase 4 is believed to be silent in E. coli under conditions tested so far;Dbxref=Genbank:YP_002403782.1,GeneID:7146514;gbkey=CDS;product=hydrogenase 4 subunit H;protein_id=YP_002403782.1;transl_table=11
NC_011748.1	RefSeq	gene	2834569	2835327	.	+	.	ID=gene2827;Name=hyfI;Dbxref=GeneID:7146515;gbkey=Gene;gene=hyfI;locus_tag=EC55989_2774
NC_011748.1	RefSeq	CDS	2834569	2835327	.	+	0	ID=cds2636;Name=YP_002403783.1;Parent=gene2827;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 9387241%3B Product type c : carrier;Dbxref=Genbank:YP_002403783.1,GeneID:7146515;gbkey=CDS;product=hydrogenase 4%2C Fe-S subunit;protein_id=YP_002403783.1;transl_table=11
NC_011748.1	RefSeq	gene	2835320	2835733	.	+	.	ID=gene2828;Name=hyfJ;Dbxref=GeneID:7146516;gbkey=Gene;gene=hyfJ;locus_tag=EC55989_2775
NC_011748.1	RefSeq	CDS	2835320	2835733	.	+	0	ID=cds2637;Name=YP_002403784.1;Parent=gene2828;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 9387241%3B Product type pf :  factor;Dbxref=Genbank:YP_002403784.1,GeneID:7146516;gbkey=CDS;product=processing element hydrogenase 4;protein_id=YP_002403784.1;transl_table=11
NC_011748.1	RefSeq	gene	2835763	2837775	.	+	.	ID=gene2829;Name=hyfR;Dbxref=GeneID:7146517;gbkey=Gene;gene=hyfR;locus_tag=EC55989_2776
NC_011748.1	RefSeq	CDS	2835763	2837775	.	+	0	ID=cds2638;Name=YP_002403785.1;Parent=gene2829;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 9387241%3B Product type r : regulator;Dbxref=Genbank:YP_002403785.1,GeneID:7146517;gbkey=CDS;product=DNA-binding transcriptional activator%2C formate sensing;protein_id=YP_002403785.1;transl_table=11
NC_011748.1	RefSeq	gene	2837797	2838528	.	+	.	ID=gene2830;Name=focB;Dbxref=GeneID:7146518;gbkey=Gene;gene=focB;locus_tag=EC55989_2777
NC_011748.1	RefSeq	CDS	2837797	2838528	.	+	0	ID=cds2639;Name=YP_002403786.1;Parent=gene2830;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 9387241%3B Product type pt :  transporter;Dbxref=Genbank:YP_002403786.1,GeneID:7146518;gbkey=CDS;product=formate transporter;protein_id=YP_002403786.1;transl_table=11
NC_011748.1	RefSeq	gene	2838682	2839743	.	-	.	ID=gene2831;Name=perM;Dbxref=GeneID:7146167;gbkey=Gene;gene=perM;locus_tag=EC55989_2778
NC_011748.1	RefSeq	CDS	2838682	2839743	.	-	0	ID=cds2640;Name=YP_002403787.1;Parent=gene2831;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002403787.1,GeneID:7146167;gbkey=CDS;product=permease;protein_id=YP_002403787.1;transl_table=11
NC_011748.1	RefSeq	gene	2839956	2841419	.	+	.	ID=gene2832;Name=yfgC;Dbxref=GeneID:7147138;gbkey=Gene;gene=yfgC;locus_tag=EC55989_2779
NC_011748.1	RefSeq	CDS	2839956	2841419	.	+	0	ID=cds2641;Name=YP_002403788.1;Parent=gene2832;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002403788.1,GeneID:7147138;gbkey=CDS;product=peptidase;protein_id=YP_002403788.1;transl_table=11
NC_011748.1	RefSeq	gene	2841440	2841799	.	+	.	ID=gene2833;Name=yfgD;Dbxref=GeneID:7148749;gbkey=Gene;gene=yfgD;locus_tag=EC55989_2780
NC_011748.1	RefSeq	CDS	2841440	2841799	.	+	0	ID=cds2642;Name=YP_002403789.1;Parent=gene2833;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002403789.1,GeneID:7148749;gbkey=CDS;product=oxidoreductase;protein_id=YP_002403789.1;transl_table=11
NC_011748.1	RefSeq	gene	2841937	2842683	.	-	.	ID=gene2834;Name=hda;Dbxref=GeneID:7148750;gbkey=Gene;gene=hda;locus_tag=EC55989_2781
NC_011748.1	RefSeq	CDS	2841937	2842683	.	-	0	ID=cds2643;Name=YP_002403790.1;Parent=gene2834;Note=controls initiation of DNA replication by inhibiting re-initiation of replication%2C promotes hydrolysis of DnaA-bound ATP;Dbxref=Genbank:YP_002403790.1,GeneID:7148750;gbkey=CDS;product=DNA replication initiation factor;protein_id=YP_002403790.1;transl_table=11
NC_011748.1	RefSeq	gene	2842733	2844022	.	-	.	ID=gene2835;Name=uraA;Dbxref=GeneID:7146400;gbkey=Gene;gene=uraA;locus_tag=EC55989_2782
NC_011748.1	RefSeq	CDS	2842733	2844022	.	-	0	ID=cds2644;Name=YP_002403791.1;Parent=gene2835;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 8332529%2C 7721693%3B Product type t : transporter;Dbxref=Genbank:YP_002403791.1,GeneID:7146400;gbkey=CDS;product=uracil transporter;protein_id=YP_002403791.1;transl_table=11
NC_011748.1	RefSeq	gene	2844108	2844734	.	-	.	ID=gene2836;Name=upp;Dbxref=GeneID:7147925;gbkey=Gene;gene=upp;locus_tag=EC55989_2783
NC_011748.1	RefSeq	CDS	2844108	2844734	.	-	0	ID=cds2645;Name=YP_002403792.1;Parent=gene2836;Note=Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate;Dbxref=Genbank:YP_002403792.1,GeneID:7147925;gbkey=CDS;product=uracil phosphoribosyltransferase;protein_id=YP_002403792.1;transl_table=11
NC_011748.1	RefSeq	STS	2844565	2844718	.	+	.	ID=id221;Dbxref=UniSTS:63899;gbkey=STS
NC_011748.1	RefSeq	gene	2845059	2846096	.	+	.	ID=gene2837;Name=purM;Dbxref=GeneID:7147924;gbkey=Gene;gene=purM;locus_tag=EC55989_2784
NC_011748.1	RefSeq	CDS	2845059	2846096	.	+	0	ID=cds2646;Name=YP_002403793.1;Parent=gene2837;Note=catalyzes the formation of 1-%285-phosphoribosyl%29-5-aminoimidazole from 2-%28formamido%29-N1-%285-phosphoribosyl%29acetamidine and ATP in purine biosynthesis;Dbxref=Genbank:YP_002403793.1,GeneID:7147924;gbkey=CDS;product=phosphoribosylaminoimidazole synthetase;protein_id=YP_002403793.1;transl_table=11
NC_011748.1	RefSeq	gene	2846096	2846734	.	+	.	ID=gene2838;Name=purN;Dbxref=GeneID:7147301;gbkey=Gene;gene=purN;locus_tag=EC55989_2785
NC_011748.1	RefSeq	CDS	2846096	2846734	.	+	0	ID=cds2647;Name=YP_002403794.1;Parent=gene2838;Note=glycinamide ribonucleotide transformylase%3B GAR Tfase%3B catalyzes the synthesis of 5%27-phosphoribosylformylglycinamide from 5%27-phosphoribosylglycinamide and 10-formyltetrahydrofolate%3B PurN requires formyl folate for the reaction unlike PurT which uses formate;Dbxref=Genbank:YP_002403794.1,GeneID:7147301;gbkey=CDS;product=phosphoribosylglycinamide formyltransferase;protein_id=YP_002403794.1;transl_table=11
NC_011748.1	RefSeq	gene	2846905	2848971	.	+	.	ID=gene2839;Name=ppk;Dbxref=GeneID:7147302;gbkey=Gene;gene=ppk;locus_tag=EC55989_2786
NC_011748.1	RefSeq	CDS	2846905	2848971	.	+	0	ID=cds2648;Name=YP_002403795.1;Parent=gene2839;Note=catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate;Dbxref=Genbank:YP_002403795.1,GeneID:7147302;gbkey=CDS;product=polyphosphate kinase;protein_id=YP_002403795.1;transl_table=11
NC_011748.1	RefSeq	gene	2848976	2850517	.	+	.	ID=gene2840;Name=ppx;Dbxref=GeneID:7147232;gbkey=Gene;gene=ppx;locus_tag=EC55989_2787
NC_011748.1	RefSeq	CDS	2848976	2850517	.	+	0	ID=cds2649;Name=YP_002403796.1;Parent=gene2840;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 93107072%2C 94025037%2C 94165003%2C 8212131%2C 8380170%3B Product type e : enzyme;Dbxref=Genbank:YP_002403796.1,GeneID:7147232;gbkey=CDS;product=exopolyphosphatase;protein_id=YP_002403796.1;transl_table=11
NC_011748.1	RefSeq	gene	2850556	2852799	.	-	.	ID=gene2841;Name=yfgF;Dbxref=GeneID:7147235;gbkey=Gene;gene=yfgF;locus_tag=EC55989_2788
NC_011748.1	RefSeq	CDS	2850556	2852799	.	-	0	ID=cds2650;Name=YP_002403797.1;Parent=gene2841;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002403797.1,GeneID:7147235;gbkey=CDS;product=inner membrane protein;protein_id=YP_002403797.1;transl_table=11
NC_011748.1	RefSeq	gene	2853016	2853306	.	-	.	ID=gene2842;Name=EC55989_2789;Dbxref=GeneID:7148751;gbkey=Gene;locus_tag=EC55989_2789
NC_011748.1	RefSeq	CDS	2853016	2853306	.	-	0	ID=cds2651;Name=YP_002403798.1;Parent=gene2842;Note=Evidence 6 : Doubtful CDS;Dbxref=Genbank:YP_002403798.1,GeneID:7148751;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403798.1;transl_table=11
NC_011748.1	RefSeq	gene	2853653	2854171	.	+	.	ID=gene2843;Name=yfgH;Dbxref=GeneID:7144829;gbkey=Gene;gene=yfgH;locus_tag=EC55989_2790
NC_011748.1	RefSeq	CDS	2853653	2854171	.	+	0	ID=cds2652;Name=YP_002403799.1;Parent=gene2843;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002403799.1,GeneID:7144829;gbkey=CDS;product=outer membrane lipoprotein;protein_id=YP_002403799.1;transl_table=11
NC_011748.1	RefSeq	gene	2854187	2854726	.	+	.	ID=gene2844;Name=yfgI;Dbxref=GeneID:7148752;gbkey=Gene;gene=yfgI;locus_tag=EC55989_2791
NC_011748.1	RefSeq	CDS	2854187	2854726	.	+	0	ID=cds2653;Name=YP_002403800.1;Parent=gene2844;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403800.1,GeneID:7148752;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403800.1;transl_table=11
NC_011748.1	RefSeq	gene	2854819	2856396	.	-	.	ID=gene2845;Name=guaA;Dbxref=GeneID:7148753;gbkey=Gene;gene=guaA;locus_tag=EC55989_2792
NC_011748.1	RefSeq	CDS	2854819	2856396	.	-	0	ID=cds2654;Name=YP_002403801.1;Parent=gene2845;Note=contains glutamine-hydrolyzing domain and glutamine amidotransferase%3B GMP-binding domain%3B functions to produce GMP from XMP in the IMP pathway;Dbxref=Genbank:YP_002403801.1,GeneID:7148753;gbkey=CDS;product=GMP synthase;protein_id=YP_002403801.1;transl_table=11
NC_011748.1	RefSeq	gene	2856465	2857931	.	-	.	ID=gene2846;Name=guaB;Dbxref=GeneID:7146378;gbkey=Gene;gene=guaB;locus_tag=EC55989_2793
NC_011748.1	RefSeq	CDS	2856465	2857931	.	-	0	ID=cds2655;Name=YP_002403802.1;Parent=gene2846;Note=catalyzes the synthesis of xanthosine monophosphate by the NAD%2B dependent oxidation of inosine monophosphate;Dbxref=Genbank:YP_002403802.1,GeneID:7146378;gbkey=CDS;product=inosine 5%27-monophosphate dehydrogenase;protein_id=YP_002403802.1;transl_table=11
NC_011748.1	RefSeq	gene	2858093	2859463	.	+	.	ID=gene2847;Name=xseA;Dbxref=GeneID:7146379;gbkey=Gene;gene=xseA;locus_tag=EC55989_2794
NC_011748.1	RefSeq	CDS	2858093	2859463	.	+	0	ID=cds2656;Name=YP_002403803.1;Parent=gene2847;Note=bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides;Dbxref=Genbank:YP_002403803.1,GeneID:7146379;gbkey=CDS;product=exodeoxyribonuclease VII large subunit;protein_id=YP_002403803.1;transl_table=11
NC_011748.1	RefSeq	gene	2859460	2859675	.	-	.	ID=gene2848;Name=yfgJ;Dbxref=GeneID:7147992;gbkey=Gene;gene=yfgJ;locus_tag=EC55989_2795
NC_011748.1	RefSeq	CDS	2859460	2859675	.	-	0	ID=cds2657;Name=YP_002403804.1;Parent=gene2848;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403804.1,GeneID:7147992;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403804.1;transl_table=11
NC_011748.1	RefSeq	gene	2859744	2861216	.	-	.	ID=gene2849;Name=engA;Dbxref=GeneID:7148754;gbkey=Gene;gene=engA;locus_tag=EC55989_2796
NC_011748.1	RefSeq	CDS	2859744	2861216	.	-	0	ID=cds2658;Name=YP_002403805.1;Parent=gene2849;Note=EngA%3B essential Neisserial GTPase%3B synchronizes cellular events by interacting with multiple targets with tandem G-domains%3B overexpression in Escherichia coli suppresses rrmJ mutation%3B structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains;Dbxref=Genbank:YP_002403805.1,GeneID:7148754;gbkey=CDS;product=GTP-binding protein EngA;protein_id=YP_002403805.1;transl_table=11
NC_011748.1	RefSeq	gene	2861334	2862512	.	-	.	ID=gene2850;Name=yfgL;Dbxref=GeneID:7145892;gbkey=Gene;gene=yfgL;locus_tag=EC55989_2797
NC_011748.1	RefSeq	CDS	2861334	2862512	.	-	0	ID=cds2659;Name=YP_002403806.1;Parent=gene2850;Note=with YaeT%2C YfiO%2C and NlpB forms a complex involved in outer membrane protein biogenesis;Dbxref=Genbank:YP_002403806.1,GeneID:7145892;gbkey=CDS;product=outer membrane protein assembly complex subunit YfgL;protein_id=YP_002403806.1;transl_table=11
NC_011748.1	RefSeq	gene	2862523	2863143	.	-	.	ID=gene2851;Name=yfgM;Dbxref=GeneID:7148755;gbkey=Gene;gene=yfgM;locus_tag=EC55989_2798
NC_011748.1	RefSeq	CDS	2862523	2863143	.	-	0	ID=cds2660;Name=YP_002403807.1;Parent=gene2851;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403807.1,GeneID:7148755;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403807.1;transl_table=11
NC_011748.1	RefSeq	gene	2863161	2864435	.	-	.	ID=gene2852;Name=hisS;Dbxref=GeneID:7148756;gbkey=Gene;gene=hisS;locus_tag=EC55989_2799
NC_011748.1	RefSeq	CDS	2863161	2864435	.	-	0	ID=cds2661;Name=YP_002403808.1;Parent=gene2852;Note=catalyzes a two-step reaction%2C first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B class II aminoacyl-tRNA synthetase%3B forms homodimers%3B some organisms have a paralogous gene%2C hisZ%2C that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG;Dbxref=Genbank:YP_002403808.1,GeneID:7148756;gbkey=CDS;product=histidyl-tRNA synthetase;protein_id=YP_002403808.1;transl_table=11
NC_011748.1	RefSeq	gene	2864455	2864545	.	-	.	ID=gene2853;Name=EC55989_misc_RNA_55;Dbxref=GeneID:7146443;gbkey=Gene;locus_tag=EC55989_misc_RNA_55
NC_011748.1	RefSeq	transcript	2864455	2864545	.	-	.	ID=rna107;Parent=gene2853;Dbxref=GeneID:7146443;gbkey=misc_RNA;product=sroE
NC_011748.1	RefSeq	exon	2864455	2864545	.	-	.	ID=id222;Parent=rna107;Dbxref=GeneID:7146443;gbkey=misc_RNA;product=sroE
NC_011748.1	RefSeq	gene	2864546	2865664	.	-	.	ID=gene2854;Name=ispG;Dbxref=GeneID:7145309;gbkey=Gene;gene=ispG;locus_tag=EC55989_2800
NC_011748.1	RefSeq	CDS	2864546	2865664	.	-	0	ID=cds2662;Name=YP_002403809.1;Parent=gene2854;Note=catalyzes the conversion of 2C-methyl-D-erythritol 2%2C4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate%3B involved in isoprenoid synthesis;Dbxref=Genbank:YP_002403809.1,GeneID:7145309;gbkey=CDS;product=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;protein_id=YP_002403809.1;transl_table=11
NC_011748.1	RefSeq	gene	2865691	2866704	.	-	.	ID=gene2855;Name=yfgA;Dbxref=GeneID:7146630;gbkey=Gene;gene=yfgA;locus_tag=EC55989_2801
NC_011748.1	RefSeq	CDS	2865691	2866704	.	-	0	ID=cds2663;Name=YP_002403810.1;Parent=gene2855;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403810.1,GeneID:7146630;gbkey=CDS;product=cytoskeletal protein RodZ;protein_id=YP_002403810.1;transl_table=11
NC_011748.1	RefSeq	gene	2866989	2868143	.	-	.	ID=gene2856;Name=yfgB;Dbxref=GeneID:7148747;gbkey=Gene;gene=yfgB;locus_tag=EC55989_2802
NC_011748.1	RefSeq	CDS	2866989	2868143	.	-	0	ID=cds2664;Name=YP_002403811.1;Parent=gene2856;Note=23S rRNA m2A2503 methyltransferase%3B methylates the C2 position of the A2530 nucleotide in 23S rRNA%3B may be involved in antibiotic resistance;Dbxref=Genbank:YP_002403811.1,GeneID:7148747;gbkey=CDS;product=ribosomal RNA large subunit methyltransferase N;protein_id=YP_002403811.1;transl_table=11
NC_011748.1	RefSeq	gene	2868293	2868724	.	-	.	ID=gene2857;Name=ndk;Dbxref=GeneID:7148748;gbkey=Gene;gene=ndk;locus_tag=EC55989_2803
NC_011748.1	RefSeq	CDS	2868293	2868724	.	-	0	ID=cds2665;Name=YP_002403812.1;Parent=gene2857;Note=catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate;Dbxref=Genbank:YP_002403812.1,GeneID:7148748;gbkey=CDS;product=nucleoside diphosphate kinase;protein_id=YP_002403812.1;transl_table=11
NC_011748.1	RefSeq	gene	2868873	2871185	.	-	.	ID=gene2858;Name=pbpC;Dbxref=GeneID:7146982;gbkey=Gene;gene=pbpC;locus_tag=EC55989_2804
NC_011748.1	RefSeq	CDS	2868873	2871185	.	-	0	ID=cds2666;Name=YP_002403813.1;Parent=gene2858;Note=penicillin-insensitive transglycosylase%2Ftranspeptidase;Dbxref=Genbank:YP_002403813.1,GeneID:7146982;gbkey=CDS;product=penicillin-binding protein 1C;protein_id=YP_002403813.1;transl_table=11
NC_011748.1	RefSeq	gene	2871186	2876147	.	-	.	ID=gene2859;Name=yfhM;Dbxref=GeneID:7147118;gbkey=Gene;gene=yfhM;locus_tag=EC55989_2805
NC_011748.1	RefSeq	CDS	2871186	2876147	.	-	0	ID=cds2667;Name=YP_002403814.1;Parent=gene2859;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403814.1,GeneID:7147118;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403814.1;transl_table=11
NC_011748.1	RefSeq	STS	2872537	2872679	.	+	.	ID=id223;Dbxref=UniSTS:149764;gbkey=STS
NC_011748.1	RefSeq	gene	2876354	2877199	.	+	.	ID=gene2860;Name=sseA;Dbxref=GeneID:7148765;gbkey=Gene;gene=sseA;locus_tag=EC55989_2806
NC_011748.1	RefSeq	CDS	2876354	2877199	.	+	0	ID=cds2668;Name=YP_002403815.1;Parent=gene2860;Note=catalyzes the transfer of a sulfur ion to cyanide or to other thiol compounds;Dbxref=Genbank:YP_002403815.1,GeneID:7148765;gbkey=CDS;product=3-mercaptopyruvate sulfurtransferase;protein_id=YP_002403815.1;transl_table=11
NC_011748.1	RefSeq	gene	2877313	2877394	.	-	.	ID=gene2861;Name=C0614;Dbxref=GeneID:7147711;gbkey=Gene;gene=C0614;locus_tag=EC55989_misc_RNA_56
NC_011748.1	RefSeq	transcript	2877313	2877394	.	-	.	ID=rna108;Parent=gene2861;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 12202758%3B Product type n : RNA;Dbxref=GeneID:7147711;gbkey=misc_RNA;product=C0614
NC_011748.1	RefSeq	exon	2877313	2877394	.	-	.	ID=id224;Parent=rna108;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 12202758%3B Product type n : RNA;Dbxref=GeneID:7147711;gbkey=misc_RNA;product=C0614
NC_011748.1	RefSeq	gene	2877389	2877693	.	+	.	ID=gene2862;Name=ryfA;Dbxref=GeneID:7145651;gbkey=Gene;gene=ryfA;locus_tag=EC55989_misc_RNA_57
NC_011748.1	RefSeq	transcript	2877389	2877693	.	+	.	ID=rna109;Parent=gene2862;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 11445539%3B Product type n : RNA;Dbxref=GeneID:7145651;gbkey=misc_RNA;product=RyfA
NC_011748.1	RefSeq	exon	2877389	2877693	.	+	.	ID=id225;Parent=rna109;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 11445539%3B Product type n : RNA;Dbxref=GeneID:7145651;gbkey=misc_RNA;product=RyfA
NC_011748.1	RefSeq	gene	2877692	2878468	.	-	.	ID=gene2863;Name=sseB;Dbxref=GeneID:7147581;gbkey=Gene;gene=sseB;locus_tag=EC55989_2807
NC_011748.1	RefSeq	CDS	2877692	2878468	.	-	0	ID=cds2669;Name=YP_002403816.1;Parent=gene2863;Note=enhances serine sensitivity caused by inhibition of homoserine dehydrogenase I;Dbxref=Genbank:YP_002403816.1,GeneID:7147581;gbkey=CDS;product=enhanced serine sensitivity protein SseB;protein_id=YP_002403816.1;transl_table=11
NC_011748.1	RefSeq	gene	2878610	2879893	.	-	.	ID=gene2864;Name=pepB;Dbxref=GeneID:7147712;gbkey=Gene;gene=pepB;locus_tag=EC55989_2808
NC_011748.1	RefSeq	CDS	2878610	2879893	.	-	0	ID=cds2670;Name=YP_002403817.1;Parent=gene2864;Note=catalyzes the removal of an N-terminal amino acid from a peptide or arylamide;Dbxref=Genbank:YP_002403817.1,GeneID:7147712;gbkey=CDS;product=aminopeptidase;protein_id=YP_002403817.1;transl_table=11
NC_011748.1	RefSeq	gene	2880071	2880271	.	-	.	ID=gene2865;Name=yfhJ;Dbxref=GeneID:7147131;gbkey=Gene;gene=yfhJ;locus_tag=EC55989_2809
NC_011748.1	RefSeq	CDS	2880071	2880271	.	-	0	ID=cds2671;Name=YP_002403818.1;Parent=gene2865;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 10393315%3B Product type pf :  factor;Dbxref=Genbank:YP_002403818.1,GeneID:7147131;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403818.1;transl_table=11
NC_011748.1	RefSeq	gene	2880283	2880618	.	-	.	ID=gene2866;Name=fdx;Dbxref=GeneID:7148762;gbkey=Gene;gene=fdx;locus_tag=EC55989_2810
NC_011748.1	RefSeq	CDS	2880283	2880618	.	-	0	ID=cds2672;Name=YP_002403819.1;Parent=gene2866;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 10393315%2C 20013001%2C 92283811%2C 94181532%2C 11551196%2C 1317854%2C 4375562%2C 8300516%3B Product type c : carrier;Dbxref=Genbank:YP_002403819.1,GeneID:7148762;gbkey=CDS;product=%5B2Fe-2S%5D ferredoxin;protein_id=YP_002403819.1;transl_table=11
NC_011748.1	RefSeq	gene	2880620	2882470	.	-	.	ID=gene2867;Name=hscA;Dbxref=GeneID:7146076;gbkey=Gene;gene=hscA;locus_tag=EC55989_2811
NC_011748.1	RefSeq	CDS	2880620	2882470	.	-	0	ID=cds2673;Name=YP_002403820.1;Parent=gene2867;Note=involved in the maturation of iron-sulfur cluster-containing proteins;Dbxref=Genbank:YP_002403820.1,GeneID:7146076;gbkey=CDS;product=chaperone protein HscA;protein_id=YP_002403820.1;transl_table=11
NC_011748.1	RefSeq	gene	2882487	2883002	.	-	.	ID=gene2868;Name=hscB;Dbxref=GeneID:7146461;gbkey=Gene;gene=hscB;locus_tag=EC55989_2812
NC_011748.1	RefSeq	CDS	2882487	2883002	.	-	0	ID=cds2674;Name=YP_002403821.1;Parent=gene2868;Note=J-type co-chaperone that regulates the ATPase and peptide-binding activity of Hsc66 chaperone%3B may function in biogenesis of iron-sulfur proteins;Dbxref=Genbank:YP_002403821.1,GeneID:7146461;gbkey=CDS;product=co-chaperone HscB;protein_id=YP_002403821.1;transl_table=11
NC_011748.1	RefSeq	gene	2883098	2883421	.	-	.	ID=gene2869;Name=iscA;Dbxref=GeneID:7146462;gbkey=Gene;gene=iscA;locus_tag=EC55989_2813
NC_011748.1	RefSeq	CDS	2883098	2883421	.	-	0	ID=cds2675;Name=YP_002403822.1;Parent=gene2869;Note=forms iron-sulfur clusters of ferredoxin %5B2FE-2S%5D%3B binds iron in the presence of the thioredoxin reductase system%3B forms homodimers and tetramers%3B similar to SufA protein;Dbxref=Genbank:YP_002403822.1,GeneID:7146462;gbkey=CDS;product=iron-sulfur cluster assembly protein;protein_id=YP_002403822.1;transl_table=11
NC_011748.1	RefSeq	gene	2883438	2883824	.	-	.	ID=gene2870;Name=iscU;Dbxref=GeneID:7146620;gbkey=Gene;gene=iscU;locus_tag=EC55989_2814
NC_011748.1	RefSeq	CDS	2883438	2883824	.	-	0	ID=cds2676;Name=YP_002403823.1;Parent=gene2870;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 10393315%2C 11994302%2C 15153099%3B Product type f : factor;Dbxref=Genbank:YP_002403823.1,GeneID:7146620;gbkey=CDS;product=scaffold protein;protein_id=YP_002403823.1;transl_table=11
NC_011748.1	RefSeq	gene	2883852	2885066	.	-	.	ID=gene2871;Name=iscS;Dbxref=GeneID:7146623;gbkey=Gene;gene=iscS;locus_tag=EC55989_2815
NC_011748.1	RefSeq	CDS	2883852	2885066	.	-	0	ID=cds2677;Name=YP_002403824.1;Parent=gene2871;Note=catalyzes the removal of elemental sulfur from cysteine to produce alanine%3B involved in NAD biosynthesis;Dbxref=Genbank:YP_002403824.1,GeneID:7146623;gbkey=CDS;product=cysteine desulfurase;protein_id=YP_002403824.1;transl_table=11
NC_011748.1	RefSeq	gene	2885178	2885666	.	-	.	ID=gene2872;Name=iscR;Dbxref=GeneID:7146622;gbkey=Gene;gene=iscR;locus_tag=EC55989_2816
NC_011748.1	RefSeq	CDS	2885178	2885666	.	-	0	ID=cds2678;Name=YP_002403825.1;Parent=gene2872;Note=regulates the expression of the iscRSUA operon;Dbxref=Genbank:YP_002403825.1,GeneID:7146622;gbkey=CDS;product=DNA-binding transcriptional regulator IscR;protein_id=YP_002403825.1;transl_table=11
NC_011748.1	RefSeq	gene	2885936	2886676	.	-	.	ID=gene2873;Name=yfhQ;Dbxref=GeneID:7146621;gbkey=Gene;gene=yfhQ;locus_tag=EC55989_2817
NC_011748.1	RefSeq	CDS	2885936	2886676	.	-	0	ID=cds2679;Name=YP_002403826.1;Parent=gene2873;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 10393315%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002403826.1,GeneID:7146621;gbkey=CDS;product=methyltransferase;protein_id=YP_002403826.1;transl_table=11
NC_011748.1	RefSeq	gene	2886795	2887598	.	+	.	ID=gene2874;Name=suhB;Dbxref=GeneID:7148766;gbkey=Gene;gene=suhB;locus_tag=EC55989_2818
NC_011748.1	RefSeq	CDS	2886795	2887598	.	+	0	ID=cds2680;Name=YP_002403827.1;Parent=gene2874;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 6389495%2C 90202735%2C 95095968%2C 10747806%2C 2138605%2C 8002619%3B Product type e : enzyme;Dbxref=Genbank:YP_002403827.1,GeneID:7148766;gbkey=CDS;product=inositol monophosphatase;protein_id=YP_002403827.1;transl_table=11
NC_011748.1	RefSeq	gene	2887716	2888597	.	+	.	ID=gene2875;Name=yfhR;Dbxref=GeneID:7147738;gbkey=Gene;gene=yfhR;locus_tag=EC55989_2820
NC_011748.1	RefSeq	CDS	2887716	2888597	.	+	0	ID=cds2681;Name=YP_002403828.1;Parent=gene2875;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002403828.1,GeneID:7147738;gbkey=CDS;product=peptidase;protein_id=YP_002403828.1;transl_table=11
NC_011748.1	RefSeq	gene	2888788	2890068	.	+	.	ID=gene2876;Name=csiE;Dbxref=GeneID:7148767;gbkey=Gene;gene=csiE;locus_tag=EC55989_2821
NC_011748.1	RefSeq	CDS	2888788	2890068	.	+	0	ID=cds2682;Name=YP_002403829.1;Parent=gene2876;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 95020540%2C 96154950%3B Product type cp : cell process;Dbxref=Genbank:YP_002403829.1,GeneID:7148767;gbkey=CDS;product=stationary phase inducible protein CsiE;protein_id=YP_002403829.1;transl_table=11
NC_011748.1	RefSeq	gene	2890060	2891199	.	-	.	ID=gene2877;Name=hcaT;Dbxref=GeneID:7145775;gbkey=Gene;gene=hcaT;locus_tag=EC55989_2822
NC_011748.1	RefSeq	CDS	2890060	2891199	.	-	0	ID=cds2683;Name=YP_002403830.1;Parent=gene2877;Note=transporter of 3-phenylpropionate across the inner membrane%3B member of the major facilitator superfamily of transporters;Dbxref=Genbank:YP_002403830.1,GeneID:7145775;gbkey=CDS;product=3-phenylpropionic acid transporter;protein_id=YP_002403830.1;transl_table=11
NC_011748.1	RefSeq	gene	2891359	2892249	.	-	.	ID=gene2878;Name=hcaR;Dbxref=GeneID:7146396;gbkey=Gene;gene=hcaR;locus_tag=EC55989_2823
NC_011748.1	RefSeq	CDS	2891359	2892249	.	-	0	ID=cds2684;Name=YP_002403831.1;Parent=gene2878;Note=activator of 3-phenylpropionic acid catabolism;Dbxref=Genbank:YP_002403831.1,GeneID:7146396;gbkey=CDS;product=DNA-binding transcriptional regulator HcaR;protein_id=YP_002403831.1;transl_table=11
NC_011748.1	RefSeq	gene	2892385	2893746	.	+	.	ID=gene2879;Name=hcaE;Dbxref=GeneID:7146395;gbkey=Gene;gene=hcaE;locus_tag=EC55989_2824
NC_011748.1	RefSeq	CDS	2892385	2893746	.	+	0	ID=cds2685;Name=YP_002403832.1;Parent=gene2879;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 83238171%2C 87008429%2C 98269008%3B Product type e : enzyme;Dbxref=Genbank:YP_002403832.1,GeneID:7146395;gbkey=CDS;product=3-phenylpropionate dioxygenase%2C large %28alpha%29 subunit;protein_id=YP_002403832.1;transl_table=11
NC_011748.1	RefSeq	gene	2893743	2894261	.	+	.	ID=gene2880;Name=hcaF;Dbxref=GeneID:7146393;gbkey=Gene;gene=hcaF;locus_tag=EC55989_2825
NC_011748.1	RefSeq	CDS	2893743	2894261	.	+	0	ID=cds2686;Name=YP_002403833.1;Parent=gene2880;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 83238171%2C 87008429%2C 98269008%2C 9603882%3B Product type e : enzyme;Dbxref=Genbank:YP_002403833.1,GeneID:7146393;gbkey=CDS;product=3-phenylpropionate dioxygenase subunit beta;protein_id=YP_002403833.1;transl_table=11
NC_011748.1	RefSeq	gene	2894261	2894581	.	+	.	ID=gene2881;Name=hcaC;Dbxref=GeneID:7146394;gbkey=Gene;gene=hcaC;locus_tag=EC55989_2826
NC_011748.1	RefSeq	CDS	2894261	2894581	.	+	0	ID=cds2687;Name=YP_002403834.1;Parent=gene2881;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 98269008%2C 9603882%3B Product type pc :  carrier;Dbxref=Genbank:YP_002403834.1,GeneID:7146394;gbkey=CDS;product=3-phenylpropionate dioxygenase ferredoxin subunit;protein_id=YP_002403834.1;transl_table=11
NC_011748.1	RefSeq	gene	2894578	2895390	.	+	.	ID=gene2882;Name=hcaB;Dbxref=GeneID:7146391;gbkey=Gene;gene=hcaB;locus_tag=EC55989_2827
NC_011748.1	RefSeq	CDS	2894578	2895390	.	+	0	ID=cds2688;Name=YP_002403835.1;Parent=gene2882;Note=Converts cis-3-%283-carboxyethyl%29-3%2C5-cyclohexadiene-1%2C2-diol %28PP-dihydrodiol%29 into 3-%282%2C3-dihydroxylphenyl%29propionate;Dbxref=Genbank:YP_002403835.1,GeneID:7146391;gbkey=CDS;product=2%2C3-dihydroxy-2%2C3-dihydrophenylpropionate dehydrogenase;protein_id=YP_002403835.1;transl_table=11
NC_011748.1	RefSeq	gene	2895400	2896602	.	+	.	ID=gene2883;Name=hcaD;Dbxref=GeneID:7146390;gbkey=Gene;gene=hcaD;locus_tag=EC55989_2828
NC_011748.1	RefSeq	CDS	2895400	2896602	.	+	0	ID=cds2689;Name=YP_002403836.1;Parent=gene2883;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 98269008%2C 9603882%3B Product type e : enzyme;Dbxref=Genbank:YP_002403836.1,GeneID:7146390;gbkey=CDS;product=phenylpropionate dioxygenase ferredoxin reductase subunit;protein_id=YP_002403836.1;transl_table=11
NC_011748.1	RefSeq	gene	2896699	2897121	.	+	.	ID=gene2884;Name=yphA;Dbxref=GeneID:7146392;gbkey=Gene;gene=yphA;locus_tag=EC55989_2829
NC_011748.1	RefSeq	CDS	2896699	2897121	.	+	0	ID=cds2690;Name=YP_002403837.1;Parent=gene2884;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002403837.1,GeneID:7146392;gbkey=CDS;product=inner membrane protein;protein_id=YP_002403837.1;transl_table=11
NC_011748.1	RefSeq	gene	2897169	2898041	.	-	.	ID=gene2885;Name=yphB;Dbxref=GeneID:7149380;gbkey=Gene;gene=yphB;locus_tag=EC55989_2830
NC_011748.1	RefSeq	CDS	2897169	2898041	.	-	0	ID=cds2691;Name=YP_002403838.1;Parent=gene2885;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403838.1,GeneID:7149380;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403838.1;transl_table=11
NC_011748.1	RefSeq	gene	2898053	2899114	.	-	.	ID=gene2886;Name=yphC;Dbxref=GeneID:7149381;gbkey=Gene;gene=yphC;locus_tag=EC55989_2831
NC_011748.1	RefSeq	CDS	2898053	2899114	.	-	0	ID=cds2692;Name=YP_002403839.1;Parent=gene2886;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002403839.1,GeneID:7149381;gbkey=CDS;product=oxidoreductase%2C Zn-dependent and NAD%28P%29-binding;protein_id=YP_002403839.1;transl_table=11
NC_011748.1	RefSeq	gene	2899180	2900178	.	-	.	ID=gene2887;Name=yphD;Dbxref=GeneID:7149382;gbkey=Gene;gene=yphD;locus_tag=EC55989_2832
NC_011748.1	RefSeq	CDS	2899180	2900178	.	-	0	ID=cds2693;Name=YP_002403840.1;Parent=gene2887;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002403840.1,GeneID:7149382;gbkey=CDS;product=sugar transporter subunit: membrane component of ABC superfamily;protein_id=YP_002403840.1;transl_table=11
NC_011748.1	RefSeq	gene	2900203	2901714	.	-	.	ID=gene2888;Name=yphE;Dbxref=GeneID:7149383;gbkey=Gene;gene=yphE;locus_tag=EC55989_2833
NC_011748.1	RefSeq	CDS	2900203	2901714	.	-	0	ID=cds2694;Name=YP_002403841.1;Parent=gene2888;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002403841.1,GeneID:7149383;gbkey=CDS;product=fused sugar transporter subunits of ABC superfamily: ATP-binding components;protein_id=YP_002403841.1;transl_table=11
NC_011748.1	RefSeq	gene	2901737	2902720	.	-	.	ID=gene2889;Name=yphF;Dbxref=GeneID:7149384;gbkey=Gene;gene=yphF;locus_tag=EC55989_2834
NC_011748.1	RefSeq	CDS	2901737	2902720	.	-	0	ID=cds2695;Name=YP_002403842.1;Parent=gene2889;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 9298646%3B Product type pt :  transporter;Dbxref=Genbank:YP_002403842.1,GeneID:7149384;gbkey=CDS;product=sugar transporter subunit: periplasmic-binding component of ABC superfamily;protein_id=YP_002403842.1;transl_table=11
NC_011748.1	RefSeq	gene	2902817	2906098	.	-	.	ID=gene2890;Name=yphG;Dbxref=GeneID:7149385;gbkey=Gene;gene=yphG;locus_tag=EC55989_2835
NC_011748.1	RefSeq	CDS	2902817	2906098	.	-	0	ID=cds2696;Name=YP_002403843.1;Parent=gene2890;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403843.1,GeneID:7149385;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403843.1;transl_table=11
NC_011748.1	RefSeq	gene	2906216	2907409	.	+	.	ID=gene2891;Name=yphH;Dbxref=GeneID:7149386;gbkey=Gene;gene=yphH;locus_tag=EC55989_2836
NC_011748.1	RefSeq	CDS	2906216	2907409	.	+	0	ID=cds2697;Name=YP_002403844.1;Parent=gene2891;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pr :  regulator;Dbxref=Genbank:YP_002403844.1,GeneID:7149386;gbkey=CDS;product=DNA-binding transcriptional regulator;protein_id=YP_002403844.1;transl_table=11
NC_011748.1	RefSeq	gene	2907473	2908726	.	-	.	ID=gene2892;Name=glyA;Dbxref=GeneID:7149387;gbkey=Gene;gene=glyA;locus_tag=EC55989_2837
NC_011748.1	RefSeq	CDS	2907473	2908726	.	-	0	ID=cds2698;Name=YP_002403845.1;Parent=gene2892;Note=catalyzes the reaction of glycine with 5%2C10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate;Dbxref=Genbank:YP_002403845.1,GeneID:7149387;gbkey=CDS;product=serine hydroxymethyltransferase;protein_id=YP_002403845.1;transl_table=11
NC_011748.1	RefSeq	gene	2909054	2910244	.	+	.	ID=gene2893;Name=hmp;Dbxref=GeneID:7146339;gbkey=Gene;gene=hmp;locus_tag=EC55989_2838
NC_011748.1	RefSeq	CDS	2909054	2910244	.	+	0	ID=cds2699;Name=YP_002403846.1;Parent=gene2893;Note=flavohemoprotein%3B catalyzes the formation of nitrate from nitric oxide%3B can also catalyze the reduction of dihydropteridine;Dbxref=Genbank:YP_002403846.1,GeneID:7146339;gbkey=CDS;product=nitric oxide dioxygenase;protein_id=YP_002403846.1;transl_table=11
NC_011748.1	RefSeq	gene	2910289	2910627	.	-	.	ID=gene2894;Name=glnB;Dbxref=GeneID:7146447;gbkey=Gene;gene=glnB;locus_tag=EC55989_2839
NC_011748.1	RefSeq	CDS	2910289	2910627	.	-	0	ID=cds2700;Name=YP_002403847.1;Parent=gene2894;Note=indirectly regulates nitrogen metabolism%3B at high nitrogen levels P-II prevents the phosphorylation of NR-I%2C the transcriptional activator of the glutamine synthetase gene %28glnA%29%3B at low nitrogen levels P-II is uridylylated to form PII-UMP and interacts with an adenylyltransferase %28GlnE%29 that activates GlnA;Dbxref=Genbank:YP_002403847.1,GeneID:7146447;gbkey=CDS;product=nitrogen regulatory protein P-II 1;protein_id=YP_002403847.1;transl_table=11
NC_011748.1	RefSeq	gene	2910688	2912022	.	-	.	ID=gene2895;Name=yfhA;Dbxref=GeneID:7146303;gbkey=Gene;gene=yfhA;locus_tag=EC55989_2840
NC_011748.1	RefSeq	CDS	2910688	2912022	.	-	0	ID=cds2701;Name=YP_002403848.1;Parent=gene2895;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 8226691%2C 8412694%3B Product type pr :  regulator;Dbxref=Genbank:YP_002403848.1,GeneID:7146303;gbkey=CDS;product=two component system DNA-binding response regulator;protein_id=YP_002403848.1;transl_table=11
NC_011748.1	RefSeq	gene	2912012	2912725	.	-	.	ID=gene2896;Name=yfhG;Dbxref=GeneID:7148757;gbkey=Gene;gene=yfhG;locus_tag=EC55989_2841
NC_011748.1	RefSeq	CDS	2912012	2912725	.	-	0	ID=cds2702;Name=YP_002403849.1;Parent=gene2896;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403849.1,GeneID:7148757;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403849.1;transl_table=11
NC_011748.1	RefSeq	gene	2912890	2914317	.	-	.	ID=gene2897;Name=yfhK;Dbxref=GeneID:7148760;gbkey=Gene;gene=yfhK;locus_tag=EC55989_2842
NC_011748.1	RefSeq	CDS	2912890	2914317	.	-	0	ID=cds2703;Name=YP_002403850.1;Parent=gene2897;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pr :  regulator;Dbxref=Genbank:YP_002403850.1,GeneID:7148760;gbkey=CDS;product=sensory kinase in two-component system;protein_id=YP_002403850.1;transl_table=11
NC_011748.1	RefSeq	gene	2914411	2914559	.	-	.	ID=gene2898;Name=tke1;Dbxref=GeneID:7148763;gbkey=Gene;gene=tke1;locus_tag=EC55989_misc_RNA_58
NC_011748.1	RefSeq	transcript	2914411	2914559	.	-	.	ID=rna110;Parent=gene2898;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 11553332%3B Product type n : RNA;Dbxref=GeneID:7148763;gbkey=misc_RNA;product=tke1
NC_011748.1	RefSeq	exon	2914411	2914559	.	-	.	ID=id226;Parent=rna110;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 11553332%3B Product type n : RNA;Dbxref=GeneID:7148763;gbkey=misc_RNA;product=tke1
NC_011748.1	RefSeq	gene	2914893	2918780	.	-	.	ID=gene2899;Name=purL;Dbxref=GeneID:7147803;gbkey=Gene;gene=purL;locus_tag=EC55989_2844
NC_011748.1	RefSeq	CDS	2914893	2918780	.	-	0	ID=cds2704;Name=YP_002403851.1;Parent=gene2899;Note=catalyzes the formation of 2-%28formamido%29-N1-%285-phospho-D-ribosyl%29acetamidine from N2-formyl-N1-%285-phospho-D-ribosyl%29glycinamide and L-glutamine in purine biosynthesis;Dbxref=Genbank:YP_002403851.1,GeneID:7147803;gbkey=CDS;product=phosphoribosylformylglycinamidine synthase;protein_id=YP_002403851.1;transl_table=11
NC_011748.1	RefSeq	gene	2919176	2920594	.	+	.	ID=gene2900;Name=yfhD;Dbxref=GeneID:7147300;gbkey=Gene;gene=yfhD;locus_tag=EC55989_2845
NC_011748.1	RefSeq	CDS	2919176	2920594	.	+	0	ID=cds2705;Name=YP_002403852.1;Parent=gene2900;Note=YfhD%3B uncharacterized member of the transglycosylase slt family%3B part of the rob operon%2C which plays a role in cellular resistance to antibiotics%2C bactericidal agents%2C and organic solvents%3B unknown function;Dbxref=Genbank:YP_002403852.1,GeneID:7147300;gbkey=CDS;product=transglycosylase;protein_id=YP_002403852.1;transl_table=11
NC_011748.1	RefSeq	STS	2920057	2920358	.	+	.	ID=id227;Dbxref=UniSTS:523639,GeneID:7147300;gbkey=STS
NC_011748.1	RefSeq	gene	2920591	2921127	.	-	.	ID=gene2901;Name=tadA;Dbxref=GeneID:7148759;gbkey=Gene;gene=tadA;locus_tag=EC55989_2846
NC_011748.1	RefSeq	CDS	2920591	2921127	.	-	0	ID=cds2706;Name=YP_002403853.1;Parent=gene2901;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 12110595%3B Product type e : enzyme;Dbxref=Genbank:YP_002403853.1,GeneID:7148759;gbkey=CDS;product=tRNA-specific adenosine deaminase;protein_id=YP_002403853.1;transl_table=11
NC_011748.1	RefSeq	gene	2921152	2921787	.	-	.	ID=gene2902;Name=yfhB;Dbxref=GeneID:7147745;gbkey=Gene;gene=yfhB;locus_tag=EC55989_2847
NC_011748.1	RefSeq	CDS	2921152	2921787	.	-	0	ID=cds2707;Name=YP_002403854.1;Parent=gene2902;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403854.1,GeneID:7147745;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403854.1;transl_table=11
NC_011748.1	RefSeq	gene	2921996	2922844	.	+	.	ID=gene2903;Name=yfhH;Dbxref=GeneID:7148758;gbkey=Gene;gene=yfhH;locus_tag=EC55989_2848
NC_011748.1	RefSeq	CDS	2921996	2922844	.	+	0	ID=cds2708;Name=YP_002403855.1;Parent=gene2903;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pr :  regulator;Dbxref=Genbank:YP_002403855.1,GeneID:7148758;gbkey=CDS;product=DNA-binding transcriptional regulator;protein_id=YP_002403855.1;transl_table=11
NC_011748.1	RefSeq	STS	2922190	2922739	.	+	.	ID=id228;Dbxref=UniSTS:474270,GeneID:7148758;gbkey=STS
NC_011748.1	RefSeq	gene	2922900	2923160	.	+	.	ID=gene2904;Name=yfhL;Dbxref=GeneID:7148761;gbkey=Gene;gene=yfhL;locus_tag=EC55989_2849
NC_011748.1	RefSeq	CDS	2922900	2923160	.	+	0	ID=cds2709;Name=YP_002403856.1;Parent=gene2904;Note=Evidence 2b : Function of strongly homologous gene%3B PubMedId : 8765743%2C 8880900%3B Product type c : carrier;Dbxref=Genbank:YP_002403856.1,GeneID:7148761;gbkey=CDS;product=ferredoxin %284Fe-4S cluster-containing protein%29 %28fdx-like%29;protein_id=YP_002403856.1;transl_table=11
NC_011748.1	RefSeq	gene	2923296	2923614	.	-	.	ID=gene2905;Name=ryfB;Dbxref=GeneID:7148764;gbkey=Gene;gene=ryfB;locus_tag=EC55989_misc_RNA_59
NC_011748.1	RefSeq	transcript	2923296	2923614	.	-	.	ID=rna111;Parent=gene2905;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 15718303%3B Product type n : RNA;Dbxref=GeneID:7148764;gbkey=misc_RNA;product=RyfB
NC_011748.1	RefSeq	exon	2923296	2923614	.	-	.	ID=id229;Parent=rna111;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 15718303%3B Product type n : RNA;Dbxref=GeneID:7148764;gbkey=misc_RNA;product=RyfB
NC_011748.1	RefSeq	gene	2923431	2923595	.	-	.	ID=gene2906;Name=EC55989_2850;Dbxref=GeneID:7147582;gbkey=Gene;locus_tag=EC55989_2850
NC_011748.1	RefSeq	CDS	2923431	2923595	.	-	0	ID=cds2710;Name=YP_002403857.1;Parent=gene2906;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403857.1,GeneID:7147582;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403857.1;transl_table=11
NC_011748.1	RefSeq	gene	2923757	2923833	.	+	.	ID=gene2907;Name=ryfC;Dbxref=GeneID:7144830;gbkey=Gene;gene=ryfC;locus_tag=EC55989_misc_RNA_60
NC_011748.1	RefSeq	transcript	2923757	2923833	.	+	.	ID=rna112;Parent=gene2907;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 15718303%3B Product type n : RNA;Dbxref=GeneID:7144830;gbkey=misc_RNA;product=RyfC
NC_011748.1	RefSeq	exon	2923757	2923833	.	+	.	ID=id230;Parent=rna112;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 15718303%3B Product type n : RNA;Dbxref=GeneID:7144830;gbkey=misc_RNA;product=RyfC
NC_011748.1	RefSeq	gene	2923854	2924234	.	-	.	ID=gene2908;Name=acpS;Dbxref=GeneID:7147583;gbkey=Gene;gene=acpS;locus_tag=EC55989_2851
NC_011748.1	RefSeq	CDS	2923854	2924234	.	-	0	ID=cds2711;Name=YP_002403858.1;Parent=gene2908;Note=Catalyzes the formation of holo-ACP%2C which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids;Dbxref=Genbank:YP_002403858.1,GeneID:7147583;gbkey=CDS;product=4%27-phosphopantetheinyl transferase;protein_id=YP_002403858.1;transl_table=11
NC_011748.1	RefSeq	gene	2924234	2924965	.	-	.	ID=gene2909;Name=pdxJ;Dbxref=GeneID:7145442;gbkey=Gene;gene=pdxJ;locus_tag=EC55989_2852
NC_011748.1	RefSeq	CDS	2924234	2924965	.	-	0	ID=cds2712;Name=YP_002403859.1;Parent=gene2909;Note=involved in the de novo synthesis of pyridoxine %28Vitamin B6%29;Dbxref=Genbank:YP_002403859.1,GeneID:7145442;gbkey=CDS;product=pyridoxine 5%27-phosphate synthase;protein_id=YP_002403859.1;transl_table=11
NC_011748.1	RefSeq	gene	2924977	2925705	.	-	.	ID=gene2910;Name=recO;Dbxref=GeneID:7147127;gbkey=Gene;gene=recO;locus_tag=EC55989_2853
NC_011748.1	RefSeq	CDS	2924977	2925705	.	-	0	ID=cds2713;Name=YP_002403860.1;Parent=gene2910;Note=involved in DNA repair and RecFOR pathway recombination%3B RecFOR proteins displace ssDNA-binding protein and facilitate the production of RecA-coated ssDNA;Dbxref=Genbank:YP_002403860.1,GeneID:7147127;gbkey=CDS;product=DNA repair protein RecO;protein_id=YP_002403860.1;transl_table=11
NC_011748.1	RefSeq	gene	2925717	2926622	.	-	.	ID=gene2911;Name=era;Dbxref=GeneID:7147365;gbkey=Gene;gene=era;locus_tag=EC55989_2854
NC_011748.1	RefSeq	CDS	2925717	2926622	.	-	0	ID=cds2714;Name=YP_002403861.1;Parent=gene2911;Note=Era%3B Escherichia coli Ras-like protein%3B Bex%3B Bacillus Era-complementing segment%3B essential protein in Escherichia coli that is involved in many cellular processes%3B GTPase%3B binds the cell membrane through apparent C-terminal domain%3B mutants are arrested during the cell cycle%3B Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome;Dbxref=Genbank:YP_002403861.1,GeneID:7147365;gbkey=CDS;product=GTP-binding protein Era;protein_id=YP_002403861.1;transl_table=11
NC_011748.1	RefSeq	gene	2926619	2927299	.	-	.	ID=gene2912;Name=rnc;Dbxref=GeneID:7146020;gbkey=Gene;gene=rnc;locus_tag=EC55989_2855
NC_011748.1	RefSeq	CDS	2926619	2927299	.	-	0	ID=cds2715;Name=YP_002403862.1;Parent=gene2912;Note=cytoplasmic enzyme involved in processing rRNA and some mRNAs%3B substrates typically have dsRNA regions%3B forms a homodimer%3B have N-terminal nuclease and C-terminal RNA-binding domains%3B requires magnesium as preferred ion for activity;Dbxref=Genbank:YP_002403862.1,GeneID:7146020;gbkey=CDS;product=ribonuclease III;protein_id=YP_002403862.1;transl_table=11
NC_011748.1	RefSeq	gene	2927572	2928546	.	-	.	ID=gene2913;Name=lepB;Dbxref=GeneID:7147445;gbkey=Gene;gene=lepB;locus_tag=EC55989_2857
NC_011748.1	RefSeq	CDS	2927572	2928546	.	-	0	ID=cds2716;Name=YP_002403863.1;Parent=gene2913;Note=catalyzes the cleavage of the amino-terminal leader peptide from secretory proteins;Dbxref=Genbank:YP_002403863.1,GeneID:7147445;gbkey=CDS;product=signal peptidase I;protein_id=YP_002403863.1;transl_table=11
NC_011748.1	RefSeq	gene	2928562	2930361	.	-	.	ID=gene2914;Name=lepA;Dbxref=GeneID:7146688;gbkey=Gene;gene=lepA;locus_tag=EC55989_2858
NC_011748.1	RefSeq	CDS	2928562	2930361	.	-	0	ID=cds2717;Name=YP_002403864.1;Parent=gene2914;Note=binds to the ribosome on the universally-conserved alpha-sarcin loop;Dbxref=Genbank:YP_002403864.1,GeneID:7146688;gbkey=CDS;product=GTP-binding protein LepA;protein_id=YP_002403864.1;transl_table=11
NC_011748.1	RefSeq	gene	2930559	2931038	.	-	.	ID=gene2915;Name=rseC;Dbxref=GeneID:7146687;gbkey=Gene;gene=rseC;locus_tag=EC55989_2859
NC_011748.1	RefSeq	CDS	2930559	2931038	.	-	0	ID=cds2718;Name=YP_002403865.1;Parent=gene2915;Note=involved in the reduction of the SoxR iron-sulfur cluster;Dbxref=Genbank:YP_002403865.1,GeneID:7146687;gbkey=CDS;product=SoxR reducing system protein RseC;protein_id=YP_002403865.1;transl_table=11
NC_011748.1	RefSeq	gene	2931035	2931991	.	-	.	ID=gene2916;Name=rseB;Dbxref=GeneID:7147532;gbkey=Gene;gene=rseB;locus_tag=EC55989_2860
NC_011748.1	RefSeq	CDS	2931035	2931991	.	-	0	ID=cds2719;Name=YP_002403866.1;Parent=gene2916;Note=periplasmic protein%3B interacts with the C-terminal domain of RseA and stimulates RseA binding to sigmaE via the cytoplasmic RseA N-terminal domain which then sequesters sigmaE in the membrane thereby preventing sigmaE associated with core RNAP;Dbxref=Genbank:YP_002403866.1,GeneID:7147532;gbkey=CDS;product=periplasmic negative regulator of sigmaE;protein_id=YP_002403866.1;transl_table=11
NC_011748.1	RefSeq	gene	2931991	2932641	.	-	.	ID=gene2917;Name=rseA;Dbxref=GeneID:7147531;gbkey=Gene;gene=rseA;locus_tag=EC55989_2861
NC_011748.1	RefSeq	CDS	2931991	2932641	.	-	0	ID=cds2720;Name=YP_002403867.1;Parent=gene2917;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 9159522%2C 97303092%2C 99431977%2C 7768826%3B Product type f : factor;Dbxref=Genbank:YP_002403867.1,GeneID:7147531;gbkey=CDS;product=anti-RNA polymerase sigma factor SigE;protein_id=YP_002403867.1;transl_table=11
NC_011748.1	RefSeq	gene	2932674	2933249	.	-	.	ID=gene2918;Name=rpoE;Dbxref=GeneID:7147530;gbkey=Gene;gene=rpoE;locus_tag=EC55989_2862
NC_011748.1	RefSeq	CDS	2932674	2933249	.	-	0	ID=cds2721;Name=YP_002403868.1;Parent=gene2918;Note=Member of the extracytoplasmic function sigma factors which are active under specific conditions%3B binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription%3B this sigma factor is involved in heat shock and oxidative stress response;Dbxref=Genbank:YP_002403868.1,GeneID:7147530;gbkey=CDS;product=RNA polymerase sigma factor RpoE;protein_id=YP_002403868.1;transl_table=11
NC_011748.1	RefSeq	gene	2933657	2935279	.	+	.	ID=gene2919;Name=nadB;Dbxref=GeneID:7147499;gbkey=Gene;gene=nadB;locus_tag=EC55989_2863
NC_011748.1	RefSeq	CDS	2933657	2935279	.	+	0	ID=cds2722;Name=YP_002403869.1;Parent=gene2919;Note=catalyzes the formation of oxaloacetate from L-aspartate;Dbxref=Genbank:YP_002403869.1,GeneID:7147499;gbkey=CDS;product=L-aspartate oxidase;protein_id=YP_002403869.1;transl_table=11
NC_011748.1	RefSeq	gene	2935264	2936001	.	-	.	ID=gene2920;Name=yfiC;Dbxref=GeneID:7146943;gbkey=Gene;gene=yfiC;locus_tag=EC55989_2864
NC_011748.1	RefSeq	CDS	2935264	2936001	.	-	0	ID=cds2723;Name=YP_002403870.1;Parent=gene2920;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002403870.1,GeneID:7146943;gbkey=CDS;product=S-adenosyl-L-methionine-dependent methyltransferase;protein_id=YP_002403870.1;transl_table=11
NC_011748.1	RefSeq	gene	2936133	2937467	.	+	.	ID=gene2921;Name=srmB;Dbxref=GeneID:7148770;gbkey=Gene;gene=srmB;locus_tag=EC55989_2865
NC_011748.1	RefSeq	CDS	2936133	2937467	.	+	0	ID=cds2724;Name=YP_002403871.1;Parent=gene2921;Note=facilitates an early step in the assembly of the 50S subunit of the ribosome;Dbxref=Genbank:YP_002403871.1,GeneID:7148770;gbkey=CDS;product=ATP-dependent RNA helicase SrmB;protein_id=YP_002403871.1;transl_table=11
NC_011748.1	RefSeq	gene	2937676	2938557	.	-	.	ID=gene2922;Name=yfiE;Dbxref=GeneID:7147707;gbkey=Gene;gene=yfiE;locus_tag=EC55989_2866
NC_011748.1	RefSeq	CDS	2937676	2938557	.	-	0	ID=cds2725;Name=YP_002403872.1;Parent=gene2922;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pr :  regulator;Dbxref=Genbank:YP_002403872.1,GeneID:7147707;gbkey=CDS;product=DNA-binding transcriptional regulator;protein_id=YP_002403872.1;transl_table=11
NC_011748.1	RefSeq	gene	2938660	2939247	.	+	.	ID=gene2923;Name=yfiK;Dbxref=GeneID:7148772;gbkey=Gene;gene=yfiK;locus_tag=EC55989_2867
NC_011748.1	RefSeq	CDS	2938660	2939247	.	+	0	ID=cds2726;Name=YP_002403873.1;Parent=gene2923;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 12562784%3B Product type t : transporter;Dbxref=Genbank:YP_002403873.1,GeneID:7148772;gbkey=CDS;product=neutral amino-acid efflux protein;protein_id=YP_002403873.1;transl_table=11
NC_011748.1	RefSeq	gene	2939302	2939685	.	-	.	ID=gene2924;Name=yfiD;Dbxref=GeneID:7148775;gbkey=Gene;gene=yfiD;locus_tag=EC55989_2868
NC_011748.1	RefSeq	CDS	2939302	2939685	.	-	0	ID=cds2727;Name=YP_002403874.1;Parent=gene2924;Note=stress-induced glycyl radical protein that can replace an oxidatively damaged pyruvate formate-lyase subunit;Dbxref=Genbank:YP_002403874.1,GeneID:7148775;gbkey=CDS;product=autonomous glycyl radical cofactor GrcA;protein_id=YP_002403874.1;transl_table=11
NC_011748.1	RefSeq	gene	2939990	2940679	.	+	.	ID=gene2925;Name=ung;Dbxref=GeneID:7148771;gbkey=Gene;gene=ung;locus_tag=EC55989_2869
NC_011748.1	RefSeq	CDS	2939990	2940679	.	+	0	ID=cds2728;Name=YP_002403875.1;Parent=gene2925;Note=Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine;Dbxref=Genbank:YP_002403875.1,GeneID:7148771;gbkey=CDS;product=uracil-DNA glycosylase;protein_id=YP_002403875.1;transl_table=11
NC_011748.1	RefSeq	gene	2940727	2941764	.	-	.	ID=gene2926;Name=yfiF;Dbxref=GeneID:7147923;gbkey=Gene;gene=yfiF;locus_tag=EC55989_2870
NC_011748.1	RefSeq	CDS	2940727	2941764	.	-	0	ID=cds2729;Name=YP_002403876.1;Parent=gene2926;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002403876.1,GeneID:7147923;gbkey=CDS;product=methyltransferase;protein_id=YP_002403876.1;transl_table=11
NC_011748.1	RefSeq	gene	2941754	2941957	.	-	.	ID=gene2927;Name=EC55989_2871;Dbxref=GeneID:7148773;gbkey=Gene;locus_tag=EC55989_2871
NC_011748.1	RefSeq	CDS	2941754	2941957	.	-	0	ID=cds2730;Name=YP_002403877.1;Parent=gene2927;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403877.1,GeneID:7148773;gbkey=CDS;product=Z3866 protein;protein_id=YP_002403877.1;transl_table=11
NC_011748.1	RefSeq	gene	2941971	2942390	.	+	.	ID=gene2928;Name=trxC;Dbxref=GeneID:7144831;gbkey=Gene;gene=trxC;locus_tag=EC55989_2872
NC_011748.1	RefSeq	CDS	2941971	2942390	.	+	0	ID=cds2731;Name=YP_002403878.1;Parent=gene2928;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 12952960%2C 9388228%2C 99175138%2C 10644706%3B Product type c : carrier;Dbxref=Genbank:YP_002403878.1,GeneID:7144831;gbkey=CDS;product=thioredoxin 2;protein_id=YP_002403878.1;transl_table=11
NC_011748.1	RefSeq	gene	2942459	2943157	.	+	.	ID=gene2929;Name=yfiP;Dbxref=GeneID:7147864;gbkey=Gene;gene=yfiP;locus_tag=EC55989_2873
NC_011748.1	RefSeq	CDS	2942459	2943157	.	+	0	ID=cds2732;Name=YP_002403879.1;Parent=gene2929;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403879.1,GeneID:7147864;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403879.1;transl_table=11
NC_011748.1	RefSeq	gene	2943189	2945849	.	+	.	ID=gene2930;Name=yfiQ;Dbxref=GeneID:7148780;gbkey=Gene;gene=yfiQ;locus_tag=EC55989_2874
NC_011748.1	RefSeq	CDS	2943189	2945849	.	+	0	ID=cds2733;Name=YP_002403880.1;Parent=gene2930;Note=Evidence 2b : Function of strongly homologous gene%3B Product type e : enzyme;Dbxref=Genbank:YP_002403880.1,GeneID:7148780;gbkey=CDS;product=fused acyl-CoA synthetase: NAD%28P%29-binding subunit %3B ATP-binding subunit;protein_id=YP_002403880.1;transl_table=11
NC_011748.1	RefSeq	gene	2945963	2947318	.	+	.	ID=gene2931;Name=pssA;Dbxref=GeneID:7148781;gbkey=Gene;gene=pssA;locus_tag=EC55989_2875
NC_011748.1	RefSeq	CDS	2945963	2947318	.	+	0	ID=cds2734;Name=YP_002403881.1;Parent=gene2931;Note=catalyzes de novo synthesis of phosphatidylserine from CDP-diacylglycerol and L-serine which leads eventually to the production of phosphatidylethanolamine%3B bounds to the ribosome;Dbxref=Genbank:YP_002403881.1,GeneID:7148781;gbkey=CDS;product=phosphatidylserine synthase;protein_id=YP_002403881.1;transl_table=11
NC_011748.1	RefSeq	gene	2947415	2947687	.	+	.	ID=gene2932;Name=yfiM;Dbxref=GeneID:7147276;gbkey=Gene;gene=yfiM;locus_tag=EC55989_2876
NC_011748.1	RefSeq	CDS	2947415	2947687	.	+	0	ID=cds2735;Name=YP_002403882.1;Parent=gene2932;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403882.1,GeneID:7147276;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403882.1;transl_table=11
NC_011748.1	RefSeq	gene	2947684	2948982	.	-	.	ID=gene2933;Name=kgtP;Dbxref=GeneID:7148777;gbkey=Gene;gene=kgtP;locus_tag=EC55989_2877
NC_011748.1	RefSeq	CDS	2947684	2948982	.	-	0	ID=cds2736;Name=YP_002403883.1;Parent=gene2933;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 91219460%2C 1709493%2C 2053984%2C 2118499%2C 2190187%2C 8419306%3B Product type t : transporter;Dbxref=Genbank:YP_002403883.1,GeneID:7148777;gbkey=CDS;product=alpha-ketoglutarate transporter;protein_id=YP_002403883.1;transl_table=11
NC_011748.1	RefSeq	gene	2949306	2949425	.	-	.	ID=gene2934;Name=EC55989_5S_3;Dbxref=GeneID:7146671;gbkey=Gene;locus_tag=EC55989_5S_3
NC_011748.1	RefSeq	rRNA	2949306	2949425	.	-	.	ID=rna113;Parent=gene2934;Dbxref=GeneID:7146671;gbkey=rRNA;product=ribosomal RNA 5S
NC_011748.1	RefSeq	exon	2949306	2949425	.	-	.	ID=id231;Parent=rna113;Dbxref=GeneID:7146671;gbkey=rRNA;product=ribosomal RNA 5S
NC_011748.1	RefSeq	gene	2949519	2952422	.	-	.	ID=gene2935;Name=EC55989_23S_2;Dbxref=GeneID:7145289;gbkey=Gene;locus_tag=EC55989_23S_2
NC_011748.1	RefSeq	rRNA	2949519	2952422	.	-	.	ID=rna114;Parent=gene2935;Dbxref=GeneID:7145289;gbkey=rRNA;product=ribosomal RNA 23S
NC_011748.1	RefSeq	exon	2949519	2952422	.	-	.	ID=id232;Parent=rna114;Dbxref=GeneID:7145289;gbkey=rRNA;product=ribosomal RNA 23S
NC_011748.1	RefSeq	gene	2952616	2952691	.	-	.	ID=gene2936;Name=EC55989_tRNA73;Dbxref=GeneID:7144760;gbkey=Gene;locus_tag=EC55989_tRNA73
NC_011748.1	RefSeq	tRNA	2952616	2952691	.	-	.	ID=rna115;Dbxref=GeneID:7144760;gbkey=tRNA;product=tRNA-Glu
NC_011748.1	RefSeq	exon	2952616	2952691	.	-	.	ID=id233;Parent=rna115;Dbxref=GeneID:7144760;gbkey=tRNA;product=tRNA-Glu
NC_011748.1	RefSeq	gene	2952863	2954404	.	-	.	ID=gene2937;Name=EC55989_16S_2;Dbxref=GeneID:7145387;gbkey=Gene;locus_tag=EC55989_16S_2
NC_011748.1	RefSeq	rRNA	2952863	2954404	.	-	.	ID=rna116;Parent=gene2937;Dbxref=GeneID:7145387;gbkey=rRNA;product=ribosomal RNA 16S
NC_011748.1	RefSeq	exon	2952863	2954404	.	-	.	ID=id234;Parent=rna116;Dbxref=GeneID:7145387;gbkey=rRNA;product=ribosomal RNA 16S
NC_011748.1	RefSeq	gene	2954848	2957421	.	-	.	ID=gene2938;Name=clpB;Dbxref=GeneID:7144633;gbkey=Gene;gene=clpB;locus_tag=EC55989_2883
NC_011748.1	RefSeq	CDS	2954848	2957421	.	-	0	ID=cds2737;Name=YP_002403884.1;Parent=gene2938;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 14550559%2C 14640692%2C 91294166%2C 93015925%2C 93388583%2C 99428468%3B Product type f : factor;Dbxref=Genbank:YP_002403884.1,GeneID:7144633;gbkey=CDS;product=protein disaggregation chaperone;protein_id=YP_002403884.1;transl_table=11
NC_011748.1	RefSeq	gene	2957399	2957543	.	-	.	ID=gene2939;Name=ryfD;Dbxref=GeneID:7145723;gbkey=Gene;gene=ryfD;locus_tag=EC55989_misc_RNA_61
NC_011748.1	RefSeq	transcript	2957399	2957543	.	-	.	ID=rna117;Parent=gene2939;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 15718303%3B Product type n : RNA;Dbxref=GeneID:7145723;gbkey=misc_RNA;product=RyfD
NC_011748.1	RefSeq	exon	2957399	2957543	.	-	.	ID=id235;Parent=rna117;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 15718303%3B Product type n : RNA;Dbxref=GeneID:7145723;gbkey=misc_RNA;product=RyfD
NC_011748.1	RefSeq	gene	2957551	2958282	.	-	.	ID=gene2940;Name=yfiH;Dbxref=GeneID:7147584;gbkey=Gene;gene=yfiH;locus_tag=EC55989_2884
NC_011748.1	RefSeq	CDS	2957551	2958282	.	-	0	ID=cds2738;Name=YP_002403885.1;Parent=gene2940;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 1906060%2C 2066329;Dbxref=Genbank:YP_002403885.1,GeneID:7147584;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403885.1;transl_table=11
NC_011748.1	RefSeq	gene	2958279	2959259	.	-	.	ID=gene2941;Name=rluD;Dbxref=GeneID:7148774;gbkey=Gene;gene=rluD;locus_tag=EC55989_2885
NC_011748.1	RefSeq	CDS	2958279	2959259	.	-	0	ID=cds2739;Name=YP_002403886.1;Parent=gene2941;Note=responsible for synthesis of pseudouridine from uracil at positions 1911%2C 1915 and 1917 in 23S ribosomal RNA;Dbxref=Genbank:YP_002403886.1,GeneID:7148774;gbkey=CDS;product=23S rRNA pseudouridine synthase D;protein_id=YP_002403886.1;transl_table=11
NC_011748.1	RefSeq	gene	2959394	2960131	.	+	.	ID=gene2942;Name=yfiO;Dbxref=GeneID:7147429;gbkey=Gene;gene=yfiO;locus_tag=EC55989_2886
NC_011748.1	RefSeq	CDS	2959394	2960131	.	+	0	ID=cds2740;Name=YP_002403887.1;Parent=gene2942;Note=with YaeT%2C NlpB and YfgL forms a complex involved in the proper assembly and%2For targeting of OMPs to the outer membrane%3B involved in resistance to ampicillin and tetracycline;Dbxref=Genbank:YP_002403887.1,GeneID:7147429;gbkey=CDS;product=outer membrane protein assembly complex subunit YfiO;protein_id=YP_002403887.1;transl_table=11
NC_011748.1	RefSeq	gene	2960402	2960743	.	+	.	ID=gene2943;Name=yfiA;Dbxref=GeneID:7148779;gbkey=Gene;gene=yfiA;locus_tag=EC55989_2887
NC_011748.1	RefSeq	CDS	2960402	2960743	.	+	0	ID=cds2741;Name=YP_002403888.1;Parent=gene2943;Note=associated with 30S ribosomal subunit%3B interferes with translation elongation;Dbxref=Genbank:YP_002403888.1,GeneID:7148779;gbkey=CDS;product=translation inhibitor protein RaiA;protein_id=YP_002403888.1;transl_table=11
NC_011748.1	RefSeq	gene	2960847	2960894	.	+	.	ID=gene2944;Name=pheL;Dbxref=GeneID:7148768;gbkey=Gene;gene=pheL;locus_tag=EC55989_5071
NC_011748.1	RefSeq	CDS	2960847	2960894	.	+	0	ID=cds2742;Name=YP_002403889.1;Parent=gene2944;Note=Evidence 1c : Function experimentally demonstrated in the studied genus%3B Product type l : leader peptide;Dbxref=Genbank:YP_002403889.1,GeneID:7148768;gbkey=CDS;product=pheA gene leader peptide;protein_id=YP_002403889.1;transl_table=11
NC_011748.1	RefSeq	gene	2960993	2962153	.	+	.	ID=gene2945;Name=pheA;Dbxref=GeneID:7147158;gbkey=Gene;gene=pheA;locus_tag=EC55989_2888
NC_011748.1	RefSeq	CDS	2960993	2962153	.	+	0	ID=cds2743;Name=YP_002403890.1;Parent=gene2945;Note=catalyzing the formation of prephenate from chorismate and the formation of phenylpyruvate from prephenate in phenylalanine biosynthesis;Dbxref=Genbank:YP_002403890.1,GeneID:7147158;gbkey=CDS;product=bifunctional chorismate mutase%2Fprephenate dehydratase;protein_id=YP_002403890.1;transl_table=11
NC_011748.1	RefSeq	gene	2962196	2963317	.	-	.	ID=gene2946;Name=tyrA;Dbxref=GeneID:7147157;gbkey=Gene;gene=tyrA;locus_tag=EC55989_2889
NC_011748.1	RefSeq	CDS	2962196	2963317	.	-	0	ID=cds2744;Name=YP_002403891.1;Parent=gene2946;Note=catalyzes the formation of prephenate from chorismate and the formation of 4-hydroxyphenylpyruvate from prephenate in tyrosine biosynthesis;Dbxref=Genbank:YP_002403891.1,GeneID:7147157;gbkey=CDS;product=bifunctional chorismate mutase%2Fprephenate dehydrogenase;protein_id=YP_002403891.1;transl_table=11
NC_011748.1	RefSeq	gene	2963328	2964398	.	-	.	ID=gene2947;Name=aroF;Dbxref=GeneID:7147881;gbkey=Gene;gene=aroF;locus_tag=EC55989_2890
NC_011748.1	RefSeq	CDS	2963328	2964398	.	-	0	ID=cds2745;Name=YP_002403892.1;Parent=gene2947;Note=catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate%2C tyrosine sensitive;Dbxref=Genbank:YP_002403892.1,GeneID:7147881;gbkey=CDS;product=phospho-2-dehydro-3-deoxyheptonate aldolase;protein_id=YP_002403892.1;transl_table=11
NC_011748.1	RefSeq	gene	2964608	2964973	.	+	.	ID=gene2948;Name=yfiL;Dbxref=GeneID:7145544;gbkey=Gene;gene=yfiL;locus_tag=EC55989_2891
NC_011748.1	RefSeq	CDS	2964608	2964973	.	+	0	ID=cds2746;Name=YP_002403893.1;Parent=gene2948;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 6396419;Dbxref=Genbank:YP_002403893.1,GeneID:7145544;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403893.1;transl_table=11
NC_011748.1	RefSeq	gene	2965123	2965641	.	+	.	ID=gene2949;Name=yfiR;Dbxref=GeneID:7148776;gbkey=Gene;gene=yfiR;locus_tag=EC55989_2892
NC_011748.1	RefSeq	CDS	2965123	2965641	.	+	0	ID=cds2747;Name=YP_002403894.1;Parent=gene2949;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403894.1,GeneID:7148776;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403894.1;transl_table=11
NC_011748.1	RefSeq	gene	2965631	2966857	.	+	.	ID=gene2950;Name=yfiN;Dbxref=GeneID:7148782;gbkey=Gene;gene=yfiN;locus_tag=EC55989_2893
NC_011748.1	RefSeq	CDS	2965631	2966857	.	+	0	ID=cds2748;Name=YP_002403895.1;Parent=gene2950;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pr :  regulator;Dbxref=Genbank:YP_002403895.1,GeneID:7148782;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403895.1;transl_table=11
NC_011748.1	RefSeq	STS	2965763	2966073	.	+	.	ID=id236;Dbxref=UniSTS:236885,GeneID:7148782;gbkey=STS
NC_011748.1	RefSeq	gene	2966873	2967355	.	+	.	ID=gene2951;Name=yfiB;Dbxref=GeneID:7148778;gbkey=Gene;gene=yfiB;locus_tag=EC55989_2894
NC_011748.1	RefSeq	CDS	2966873	2967355	.	+	0	ID=cds2749;Name=YP_002403896.1;Parent=gene2951;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 96032391%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002403896.1,GeneID:7148778;gbkey=CDS;product=outer membrane lipoprotein;protein_id=YP_002403896.1;transl_table=11
NC_011748.1	RefSeq	gene	2967432	2967779	.	-	.	ID=gene2952;Name=rplS;Dbxref=GeneID:7148769;gbkey=Gene;gene=rplS;locus_tag=EC55989_2895
NC_011748.1	RefSeq	CDS	2967432	2967779	.	-	0	ID=cds2750;Name=YP_002403897.1;Parent=gene2952;Note=this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site;Dbxref=Genbank:YP_002403897.1,GeneID:7148769;gbkey=CDS;product=50S ribosomal protein L19;protein_id=YP_002403897.1;transl_table=11
NC_011748.1	RefSeq	gene	2967821	2968588	.	-	.	ID=gene2953;Name=trmD;Dbxref=GeneID:7147479;gbkey=Gene;gene=trmD;locus_tag=EC55989_2896
NC_011748.1	RefSeq	CDS	2967821	2968588	.	-	0	ID=cds2751;Name=YP_002403898.1;Parent=gene2953;Note=methylates guanosine-37 in various tRNAs%3B uses S-adenosyl-L-methionine to transfer methyl group to tRNA;Dbxref=Genbank:YP_002403898.1,GeneID:7147479;gbkey=CDS;product=tRNA %28guanine-N%281%29-%29-methyltransferase;protein_id=YP_002403898.1;transl_table=11
NC_011748.1	RefSeq	gene	2968619	2969167	.	-	.	ID=gene2954;Name=rimM;Dbxref=GeneID:7147846;gbkey=Gene;gene=rimM;locus_tag=EC55989_2897
NC_011748.1	RefSeq	CDS	2968619	2969167	.	-	0	ID=cds2752;Name=YP_002403899.1;Parent=gene2954;Note=Essential for efficient processing of 16S rRNA;Dbxref=Genbank:YP_002403899.1,GeneID:7147846;gbkey=CDS;product=16S rRNA-processing protein RimM;protein_id=YP_002403899.1;transl_table=11
NC_011748.1	RefSeq	gene	2969186	2969434	.	-	.	ID=gene2955;Name=rpsP;Dbxref=GeneID:7147422;gbkey=Gene;gene=rpsP;locus_tag=EC55989_2898
NC_011748.1	RefSeq	CDS	2969186	2969434	.	-	0	ID=cds2753;Name=YP_002403900.1;Parent=gene2955;Note=binds to lower part of 30S body where it stabilizes two domains%3B required for efficient assembly of 30S%3B in Escherichia coli this protein has nuclease activity;Dbxref=Genbank:YP_002403900.1,GeneID:7147422;gbkey=CDS;product=30S ribosomal protein S16;protein_id=YP_002403900.1;transl_table=11
NC_011748.1	RefSeq	gene	2969571	2970932	.	-	.	ID=gene2956;Name=ffh;Dbxref=GeneID:7147520;gbkey=Gene;gene=ffh;locus_tag=EC55989_2899
NC_011748.1	RefSeq	CDS	2969571	2970932	.	-	0	ID=cds2754;Name=YP_002403901.1;Parent=gene2956;Note=with 4.5S RNA forms a signal recognition particle involved in targeting and integration of inner membrane proteins;Dbxref=Genbank:YP_002403901.1,GeneID:7147520;gbkey=CDS;product=signal recognition particle protein;protein_id=YP_002403901.1;transl_table=11
NC_011748.1	RefSeq	gene	2971024	2971890	.	+	.	ID=gene2957;Name=ypjD;Dbxref=GeneID:7146095;gbkey=Gene;gene=ypjD;locus_tag=EC55989_2900
NC_011748.1	RefSeq	CDS	2971024	2971890	.	+	0	ID=cds2755;Name=YP_002403902.1;Parent=gene2957;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002403902.1,GeneID:7146095;gbkey=CDS;product=inner membrane protein;protein_id=YP_002403902.1;transl_table=11
NC_011748.1	RefSeq	gene	2972001	2973197	.	+	.	ID=gene2958;Name=yfjD;Dbxref=GeneID:7149388;gbkey=Gene;gene=yfjD;locus_tag=EC55989_2901
NC_011748.1	RefSeq	CDS	2972001	2973197	.	+	0	ID=cds2756;Name=YP_002403903.1;Parent=gene2958;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002403903.1,GeneID:7149388;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403903.1;transl_table=11
NC_011748.1	RefSeq	gene	2973252	2973845	.	-	.	ID=gene2959;Name=grpE;Dbxref=GeneID:7148784;gbkey=Gene;gene=grpE;locus_tag=EC55989_2902
NC_011748.1	RefSeq	CDS	2973252	2973845	.	-	0	ID=cds2757;Name=YP_002403904.1;Parent=gene2959;Note=with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins%3B may act as a thermosensor;Dbxref=Genbank:YP_002403904.1,GeneID:7148784;gbkey=CDS;product=heat shock protein GrpE;protein_id=YP_002403904.1;transl_table=11
NC_011748.1	RefSeq	gene	2973968	2974846	.	+	.	ID=gene2960;Name=ppnK;Dbxref=GeneID:7146369;gbkey=Gene;gene=ppnK;locus_tag=EC55989_2903
NC_011748.1	RefSeq	CDS	2973968	2974846	.	+	0	ID=cds2758;Name=YP_002403905.1;Parent=gene2960;Note=catalyzes the phosphorylation of NAD to NADP;Dbxref=Genbank:YP_002403905.1,GeneID:7146369;gbkey=CDS;product=inorganic polyphosphate%2FATP-NAD kinase;protein_id=YP_002403905.1;transl_table=11
NC_011748.1	RefSeq	gene	2974932	2976593	.	+	.	ID=gene2961;Name=recN;Dbxref=GeneID:7148783;gbkey=Gene;gene=recN;locus_tag=EC55989_2904
NC_011748.1	RefSeq	CDS	2974932	2976593	.	+	0	ID=cds2759;Name=YP_002403906.1;Parent=gene2961;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 87259985%2C 91355307%2C 95058623%2C 3037486%3B Product type cp : cell process;Dbxref=Genbank:YP_002403906.1,GeneID:7148783;gbkey=CDS;product=recombination and repair protein;protein_id=YP_002403906.1;transl_table=11
NC_011748.1	RefSeq	gene	2976742	2977083	.	+	.	ID=gene2962;Name=smpA;Dbxref=GeneID:7147364;gbkey=Gene;gene=smpA;locus_tag=EC55989_2905
NC_011748.1	RefSeq	CDS	2976742	2977083	.	+	0	ID=cds2760;Name=YP_002403907.1;Parent=gene2962;Note=Evidence 2b : Function of strongly homologous gene%3B PubMedId : 2045357%3B Product type lp : lipoprotein;Dbxref=Genbank:YP_002403907.1,GeneID:7147364;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403907.1;transl_table=11
NC_011748.1	RefSeq	gene	2977145	2977435	.	-	.	ID=gene2963;Name=yfjF;Dbxref=GeneID:7147668;gbkey=Gene;gene=yfjF;locus_tag=EC55989_2906
NC_011748.1	RefSeq	CDS	2977145	2977435	.	-	0	ID=cds2761;Name=YP_002403908.1;Parent=gene2963;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403908.1,GeneID:7147668;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403908.1;transl_table=11
NC_011748.1	RefSeq	gene	2977425	2977901	.	-	.	ID=gene2964;Name=yfjG;Dbxref=GeneID:7148785;gbkey=Gene;gene=yfjG;locus_tag=EC55989_2907
NC_011748.1	RefSeq	CDS	2977425	2977901	.	-	0	ID=cds2762;Name=YP_002403909.1;Parent=gene2964;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403909.1,GeneID:7148785;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403909.1;transl_table=11
NC_011748.1	RefSeq	gene	2978033	2978515	.	+	.	ID=gene2965;Name=smpB;Dbxref=GeneID:7148786;gbkey=Gene;gene=smpB;locus_tag=EC55989_2908
NC_011748.1	RefSeq	CDS	2978033	2978515	.	+	0	ID=cds2763;Name=YP_002403910.1;Parent=gene2965;Note=binds to ssrA RNA %28tmRNA%29 and is required for its successful binding to ribosomes%3B also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site%3B SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus%3B both the tmRNA and SmpB are regulated in cell cycle-dependent manner%3B functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation;Dbxref=Genbank:YP_002403910.1,GeneID:7148786;gbkey=CDS;product=SsrA-binding protein;protein_id=YP_002403910.1;transl_table=11
NC_011748.1	RefSeq	gene	2978723	2979171	.	+	.	ID=gene2966;Name=ssrA;Dbxref=GeneID:7147669;gbkey=Gene;gene=ssrA;locus_tag=EC55989_misc_RNA_62
NC_011748.1	RefSeq	transcript	2978723	2979171	.	+	.	ID=rna118;Parent=gene2966;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 8584937%3B Product type n : RNA;Dbxref=GeneID:7147669;gbkey=misc_RNA;product=TmRNA
NC_011748.1	RefSeq	exon	2978723	2979171	.	+	.	ID=id237;Parent=rna118;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 8584937%3B Product type n : RNA;Dbxref=GeneID:7147669;gbkey=misc_RNA;product=TmRNA
NC_011748.1	RefSeq	gene	2979298	2980539	.	+	.	ID=gene2967;Name=intA;Dbxref=GeneID:7147716;gbkey=Gene;gene=intA;locus_tag=EC55989_2909
NC_011748.1	RefSeq	CDS	2979298	2980539	.	+	0	ID=cds2764;Name=YP_002403911.1;Parent=gene2967;Note=CP4-57 prophage%3B integrase;Dbxref=Genbank:YP_002403911.1,GeneID:7147716;gbkey=CDS;product=integrase;protein_id=YP_002403911.1;transl_table=11
NC_011748.1	RefSeq	gene	2980678	2984424	.	-	.	ID=gene2968;Name=EC55989_2910;Dbxref=GeneID:7146607;gbkey=Gene;locus_tag=EC55989_2910
NC_011748.1	RefSeq	CDS	2980678	2984424	.	-	0	ID=cds2765;Name=YP_002403912.1;Parent=gene2968;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002403912.1,GeneID:7146607;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403912.1;transl_table=11
NC_011748.1	RefSeq	gene	2984892	2988743	.	+	.	ID=gene2969;Name=EC55989_2911;Dbxref=GeneID:7144832;gbkey=Gene;locus_tag=EC55989_2911
NC_011748.1	RefSeq	CDS	2984892	2988743	.	+	0	ID=cds2766;Name=YP_002403913.1;Parent=gene2969;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002403913.1,GeneID:7144832;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403913.1;transl_table=11
NC_011748.1	RefSeq	gene	2988789	2989535	.	+	.	ID=gene2970;Name=EC55989_2912;Dbxref=GeneID:7144833;gbkey=Gene;locus_tag=EC55989_2912
NC_011748.1	RefSeq	CDS	2988789	2989535	.	+	0	ID=cds2767;Name=YP_002403914.1;Parent=gene2970;Note=Evidence 5 : No homology to any previously reported sequences%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002403914.1,GeneID:7144833;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403914.1;transl_table=11
NC_011748.1	RefSeq	gene	2989387	2989701	.	+	.	ID=gene2971;Name=EC55989_2913;Dbxref=GeneID:7144834;gbkey=Gene;locus_tag=EC55989_2913
NC_011748.1	RefSeq	CDS	2989387	2989701	.	+	0	ID=cds2768;Name=YP_002403915.1;Parent=gene2971;Note=Evidence 5 : No homology to any previously reported sequences%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002403915.1,GeneID:7144834;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403915.1;transl_table=11
NC_011748.1	RefSeq	gene	2989786	2989944	.	-	.	ID=gene2972;Name=EC55989_2914;Dbxref=GeneID:7144835;gbkey=Gene;locus_tag=EC55989_2914
NC_011748.1	RefSeq	CDS	2989786	2989944	.	-	0	ID=cds2769;Name=YP_002403916.1;Parent=gene2972;Note=Evidence 5 : No homology to any previously reported sequences%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002403916.1,GeneID:7144835;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403916.1;transl_table=11
NC_011748.1	RefSeq	gene	2989969	2990850	.	-	.	ID=gene2973;Name=EC55989_2915;Dbxref=GeneID:7144836;gbkey=Gene;locus_tag=EC55989_2915
NC_011748.1	RefSeq	CDS	2989969	2990850	.	-	0	ID=cds2770;Name=YP_002403917.1;Parent=gene2973;Note=Evidence 5 : No homology to any previously reported sequences%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002403917.1,GeneID:7144836;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403917.1;transl_table=11
NC_011748.1	RefSeq	gene	2991369	2991668	.	+	.	ID=gene2974;Name=EC55989_2916;Dbxref=GeneID:7144837;gbkey=Gene;locus_tag=EC55989_2916
NC_011748.1	RefSeq	CDS	2991369	2991668	.	+	0	ID=cds2771;Name=YP_002403918.1;Parent=gene2974;Note=Evidence 7 : Gene remnant%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002403918.1,GeneID:7144837;gbkey=CDS;product=GTP-binding factor %28fragment%29 from CP4-like prophage;protein_id=YP_002403918.1;transl_table=11
NC_011748.1	RefSeq	gene	2991689	2992036	.	+	.	ID=gene2975;Name=EC55989_2917;Dbxref=GeneID:7144838;gbkey=Gene;locus_tag=EC55989_2917
NC_011748.1	RefSeq	CDS	2991689	2992036	.	+	0	ID=cds2772;Name=YP_002403919.1;Parent=gene2975;Note=Evidence 2b : Function of strongly homologous gene%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002403919.1,GeneID:7144838;gbkey=CDS;product=transposase ORF A%2C IS3 family;protein_id=YP_002403919.1;transl_table=11
NC_011748.1	RefSeq	gene	2992156	2992902	.	+	.	ID=gene2976;Name=EC55989_2918;Dbxref=GeneID:7144839;gbkey=Gene;locus_tag=EC55989_2918;pseudo=true
NC_011748.1	RefSeq	region	2992156	2992902	.	+	.	ID=id238;Note=fragment of transposase ORF B%2C IS3 family %28partial%29%3BEvidence 7 : Gene remnant%3B Product type pe :  enzyme;Dbxref=GeneID:7144839;gbkey=misc_feature
NC_011748.1	RefSeq	gene	2992872	2993471	.	-	.	ID=gene2977;Name=EC55989_2919;Dbxref=GeneID:7144840;gbkey=Gene;locus_tag=EC55989_2919
NC_011748.1	RefSeq	CDS	2992872	2993471	.	-	0	ID=cds2773;Name=YP_002403920.1;Parent=gene2977;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002403920.1,GeneID:7144840;gbkey=CDS;product=outer membrane protein;protein_id=YP_002403920.1;transl_table=11
NC_011748.1	RefSeq	gene	2993681	2993869	.	-	.	ID=gene2978;Name=pinH;Dbxref=GeneID:7144841;gbkey=Gene;gene=pinH;locus_tag=EC55989_2920;pseudo=true
NC_011748.1	RefSeq	region	2993681	2993869	.	-	.	ID=id239;Note=fragment of  invertase fragment %28fragment%29 %28partial%29%3BEvidence 7 : Gene remnant%3B Product type pe :  enzyme;Dbxref=GeneID:7144841;gbkey=misc_feature
NC_011748.1	RefSeq	gene	2994254	2994943	.	-	.	ID=gene2979;Name=EC55989_2921;Dbxref=GeneID:7147190;gbkey=Gene;locus_tag=EC55989_2921;pseudo=true
NC_011748.1	RefSeq	region	2994254	2994943	.	-	.	ID=id240;Note=fragment of conserved hypothetical protein from bacteriophage origin %28part 2%29%3BEvidence 7 : Gene remnant;Dbxref=GeneID:7147190;gbkey=misc_feature
NC_011748.1	RefSeq	gene	2995144	2995626	.	-	.	ID=gene2980;Name=EC55989_2922;Dbxref=GeneID:7144842;gbkey=Gene;locus_tag=EC55989_2922;pseudo=true
NC_011748.1	RefSeq	region	2995144	2995626	.	-	.	ID=id241;Note=fragment of conserved hypothetical protein from bacteriophage origin %28part 1%29%3BEvidence 7 : Gene remnant;Dbxref=GeneID:7144842;gbkey=misc_feature
NC_011748.1	RefSeq	gene	2996141	2996470	.	-	.	ID=gene2981;Name=EC55989_2923;Dbxref=GeneID:7144843;gbkey=Gene;locus_tag=EC55989_2923
NC_011748.1	RefSeq	CDS	2996141	2996470	.	-	0	ID=cds2774;Name=YP_002403921.1;Parent=gene2981;Note=Evidence 6 : Doubtful CDS;Dbxref=Genbank:YP_002403921.1,GeneID:7144843;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403921.1;transl_table=11
NC_011748.1	RefSeq	gene	2996377	2996452	.	-	.	ID=gene2982;Name=EC55989_tRNA72;Dbxref=GeneID:7144844;gbkey=Gene;locus_tag=EC55989_tRNA72
NC_011748.1	RefSeq	tRNA	2996377	2996452	.	-	.	ID=rna119;Dbxref=GeneID:7144844;gbkey=tRNA;product=tRNA-Met
NC_011748.1	RefSeq	exon	2996377	2996452	.	-	.	ID=id242;Parent=rna119;Dbxref=GeneID:7144844;gbkey=tRNA;product=tRNA-Met
NC_011748.1	RefSeq	gene	2997012	2998658	.	+	.	ID=gene2983;Name=EC55989_2924;Dbxref=GeneID:7145386;gbkey=Gene;locus_tag=EC55989_2924;pseudo=true
NC_011748.1	RefSeq	region	2997012	2998658	.	+	.	ID=id243;Note=fragment of  Alpha-amylase %28part 1%29%3BEvidence 7 : Gene remnant%3B Product type pe :  enzyme;Dbxref=GeneID:7145386;gbkey=misc_feature
NC_011748.1	RefSeq	gene	2998732	2998854	.	+	.	ID=gene2984;Name=EC55989_2925;Dbxref=GeneID:7144845;gbkey=Gene;locus_tag=EC55989_2925;pseudo=true
NC_011748.1	RefSeq	region	2998732	2998854	.	+	.	ID=id244;Note=fragment of  Alpha-amylase %28part 2%29%3BEvidence 7 : Gene remnant%3B Product type pe :  enzyme;Dbxref=GeneID:7144845;gbkey=misc_feature
NC_011748.1	RefSeq	gene	2998993	2999265	.	+	.	ID=gene2985;Name=yqaD;Dbxref=GeneID:7144846;gbkey=Gene;gene=yqaD;locus_tag=EC55989_2926
NC_011748.1	RefSeq	CDS	2998993	2999265	.	+	0	ID=cds2775;Name=YP_002403922.1;Parent=gene2985;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403922.1,GeneID:7144846;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403922.1;transl_table=11
NC_011748.1	RefSeq	gene	2999601	3000578	.	+	.	ID=gene2986;Name=ygaT;Dbxref=GeneID:7149391;gbkey=Gene;gene=ygaT;locus_tag=EC55989_2927
NC_011748.1	RefSeq	CDS	2999601	3000578	.	+	0	ID=cds2776;Name=YP_002403923.1;Parent=gene2986;Note=in Escherichia coli this gene is induced by carbon starvation and depends on sigma S and cAMP-CRP%3B the structure of the Gab protein shows it is a member of non-heme iron %28II%29-dependent oxygenase superfamily which includes clavamini acid synthases%3B forms homotetramers in solution;Dbxref=Genbank:YP_002403923.1,GeneID:7149391;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403923.1;transl_table=11
NC_011748.1	RefSeq	gene	3000598	3001866	.	+	.	ID=gene2987;Name=ygaF;Dbxref=GeneID:7148794;gbkey=Gene;gene=ygaF;locus_tag=EC55989_2928
NC_011748.1	RefSeq	CDS	3000598	3001866	.	+	0	ID=cds2777;Name=YP_002403924.1;Parent=gene2987;Note=catalyzed the formation of 2-ketoglutarate from 2-hydroxyglutarate;Dbxref=Genbank:YP_002403924.1,GeneID:7148794;gbkey=CDS;product=hydroxyglutarate oxidase;protein_id=YP_002403924.1;transl_table=11
NC_011748.1	RefSeq	gene	3001889	3003337	.	+	.	ID=gene2988;Name=gabD;Dbxref=GeneID:7148790;gbkey=Gene;gene=gabD;locus_tag=EC55989_2929
NC_011748.1	RefSeq	CDS	3001889	3003337	.	+	0	ID=cds2778;Name=YP_002403925.1;Parent=gene2988;Note=catalyzes the formation of succinate from succinate semialdehyde%3B NADP dependent;Dbxref=Genbank:YP_002403925.1,GeneID:7148790;gbkey=CDS;product=succinate-semialdehyde dehydrogenase I;protein_id=YP_002403925.1;transl_table=11
NC_011748.1	RefSeq	gene	3003351	3004631	.	+	.	ID=gene2989;Name=gabT;Dbxref=GeneID:7146237;gbkey=Gene;gene=gabT;locus_tag=EC55989_2930
NC_011748.1	RefSeq	CDS	3003351	3004631	.	+	0	ID=cds2779;Name=YP_002403926.1;Parent=gene2989;Note=catalyzes the formation of succinate semialdehyde and glutamate from 4-aminobutanoate and 2-oxoglutarate;Dbxref=Genbank:YP_002403926.1,GeneID:7146237;gbkey=CDS;product=4-aminobutyrate aminotransferase;protein_id=YP_002403926.1;transl_table=11
NC_011748.1	RefSeq	gene	3004942	3006342	.	+	.	ID=gene2990;Name=gabP;Dbxref=GeneID:7146239;gbkey=Gene;gene=gabP;locus_tag=EC55989_2931
NC_011748.1	RefSeq	CDS	3004942	3006342	.	+	0	ID=cds2780;Name=YP_002403927.1;Parent=gene2990;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 94127927%2C 9685361%2C 8297211%3B Product type t : transporter;Dbxref=Genbank:YP_002403927.1,GeneID:7146239;gbkey=CDS;product=gamma-aminobutyrate transporter;protein_id=YP_002403927.1;transl_table=11
NC_011748.1	RefSeq	gene	3006363	3007025	.	+	.	ID=gene2991;Name=csiR;Dbxref=GeneID:7146238;gbkey=Gene;gene=csiR;locus_tag=EC55989_2932
NC_011748.1	RefSeq	CDS	3006363	3007025	.	+	0	ID=cds2781;Name=YP_002403928.1;Parent=gene2991;Note=regulator of gab gene expression;Dbxref=Genbank:YP_002403928.1,GeneID:7146238;gbkey=CDS;product=DNA-binding transcriptional regulator CsiR;protein_id=YP_002403928.1;transl_table=11
NC_011748.1	RefSeq	gene	3007026	3007475	.	-	.	ID=gene2992;Name=ygaU;Dbxref=GeneID:7145776;gbkey=Gene;gene=ygaU;locus_tag=EC55989_2933
NC_011748.1	RefSeq	CDS	3007026	3007475	.	-	0	ID=cds2782;Name=YP_002403929.1;Parent=gene2992;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403929.1,GeneID:7145776;gbkey=CDS;product=LysM domain%2FBON superfamily protein;protein_id=YP_002403929.1;transl_table=11
NC_011748.1	RefSeq	gene	3007559	3007717	.	-	.	ID=gene2993;Name=yqaE;Dbxref=GeneID:7148795;gbkey=Gene;gene=yqaE;locus_tag=EC55989_2934
NC_011748.1	RefSeq	CDS	3007559	3007717	.	-	0	ID=cds2783;Name=YP_002403930.1;Parent=gene2993;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002403930.1,GeneID:7148795;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403930.1;transl_table=11
NC_011748.1	RefSeq	gene	3007900	3008199	.	+	.	ID=gene2994;Name=ygaV;Dbxref=GeneID:7149392;gbkey=Gene;gene=ygaV;locus_tag=EC55989_2935
NC_011748.1	RefSeq	CDS	3007900	3008199	.	+	0	ID=cds2784;Name=YP_002403931.1;Parent=gene2994;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pr :  regulator;Dbxref=Genbank:YP_002403931.1,GeneID:7149392;gbkey=CDS;product=DNA-binding transcriptional regulator;protein_id=YP_002403931.1;transl_table=11
NC_011748.1	RefSeq	gene	3008209	3008733	.	+	.	ID=gene2995;Name=ygaP;Dbxref=GeneID:7148796;gbkey=Gene;gene=ygaP;locus_tag=EC55989_2936
NC_011748.1	RefSeq	CDS	3008209	3008733	.	+	0	ID=cds2785;Name=YP_002403932.1;Parent=gene2995;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002403932.1,GeneID:7148796;gbkey=CDS;product=inner membrane protein with hydrolase activity;protein_id=YP_002403932.1;transl_table=11
NC_011748.1	RefSeq	gene	3008780	3009184	.	-	.	ID=gene2996;Name=stpA;Dbxref=GeneID:7148793;gbkey=Gene;gene=stpA;locus_tag=EC55989_2937
NC_011748.1	RefSeq	CDS	3008780	3009184	.	-	0	ID=cds2786;Name=YP_002403933.1;Parent=gene2996;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 20485613%2C 93126121%2C 9643551%2C 98132400%2C 99415935%2C 1480493%2C 7961433%3B Product type r : regulator;Dbxref=Genbank:YP_002403933.1,GeneID:7148793;gbkey=CDS;product=DNA binding protein;protein_id=YP_002403933.1;transl_table=11
NC_011748.1	RefSeq	gene	3009852	3010301	.	+	.	ID=gene2997;Name=ygaW;Dbxref=GeneID:7147725;gbkey=Gene;gene=ygaW;locus_tag=EC55989_2938
NC_011748.1	RefSeq	CDS	3009852	3010301	.	+	0	ID=cds2787;Name=YP_002403934.1;Parent=gene2997;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002403934.1,GeneID:7147725;gbkey=CDS;product=inner membrane protein;protein_id=YP_002403934.1;transl_table=11
NC_011748.1	RefSeq	gene	3010338	3010682	.	-	.	ID=gene2998;Name=ygaC;Dbxref=GeneID:7148797;gbkey=Gene;gene=ygaC;locus_tag=EC55989_2939
NC_011748.1	RefSeq	CDS	3010338	3010682	.	-	0	ID=cds2788;Name=YP_002403935.1;Parent=gene2998;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 7961433;Dbxref=Genbank:YP_002403935.1,GeneID:7148797;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403935.1;transl_table=11
NC_011748.1	RefSeq	gene	3010822	3011163	.	+	.	ID=gene2999;Name=ygaM;Dbxref=GeneID:7148788;gbkey=Gene;gene=ygaM;locus_tag=EC55989_2940
NC_011748.1	RefSeq	CDS	3010822	3011163	.	+	0	ID=cds2789;Name=YP_002403936.1;Parent=gene2999;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403936.1,GeneID:7148788;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403936.1;transl_table=11
NC_011748.1	RefSeq	gene	3011411	3011656	.	+	.	ID=gene3000;Name=nrdH;Dbxref=GeneID:7148792;gbkey=Gene;gene=nrdH;locus_tag=EC55989_2941
NC_011748.1	RefSeq	CDS	3011411	3011656	.	+	0	ID=cds2790;Name=YP_002403937.1;Parent=gene3000;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 9218434%2C 11441020%2C 8820648%3B Product type pc :  carrier;Dbxref=Genbank:YP_002403937.1,GeneID:7148792;gbkey=CDS;product=glutaredoxin-like protein;protein_id=YP_002403937.1;transl_table=11
NC_011748.1	RefSeq	gene	3011653	3012063	.	+	.	ID=gene3001;Name=nrdI;Dbxref=GeneID:7147024;gbkey=Gene;gene=nrdI;locus_tag=EC55989_2942
NC_011748.1	RefSeq	CDS	3011653	3012063	.	+	0	ID=cds2791;Name=YP_002403938.1;Parent=gene3001;Note=in Salmonella NrdI has a stimulatory effect on the ribonucleotide reductase activity of NrdH with NrdEF;Dbxref=Genbank:YP_002403938.1,GeneID:7147024;gbkey=CDS;product=ribonucleotide reductase stimulatory protein;protein_id=YP_002403938.1;transl_table=11
NC_011748.1	RefSeq	gene	3012036	3014180	.	+	.	ID=gene3002;Name=nrdE;Dbxref=GeneID:7147025;gbkey=Gene;gene=nrdE;locus_tag=EC55989_2943
NC_011748.1	RefSeq	CDS	3012036	3014180	.	+	0	ID=cds2792;Name=YP_002403939.1;Parent=gene3002;Note=Catalyzes the rate-limiting step in dNTP synthesis;Dbxref=Genbank:YP_002403939.1,GeneID:7147025;gbkey=CDS;product=ribonucleotide-diphosphate reductase subunit alpha;protein_id=YP_002403939.1;transl_table=11
NC_011748.1	RefSeq	gene	3014190	3015149	.	+	.	ID=gene3003;Name=nrdF;Dbxref=GeneID:7147021;gbkey=Gene;gene=nrdF;locus_tag=EC55989_2944
NC_011748.1	RefSeq	CDS	3014190	3015149	.	+	0	ID=cds2793;Name=YP_002403940.1;Parent=gene3003;Note=B2 or R2 protein%3B type 1b enzyme%3B catalyzes the rate-limiting step in dNTP synthesis%3B converts nucleotides to deoxynucleotides%3B forms a homodimer and then a multimeric complex with NrdE;Dbxref=Genbank:YP_002403940.1,GeneID:7147021;gbkey=CDS;product=ribonucleotide-diphosphate reductase subunit beta;protein_id=YP_002403940.1;transl_table=11
NC_011748.1	RefSeq	gene	3015504	3016706	.	+	.	ID=gene3004;Name=proV;Dbxref=GeneID:7147022;gbkey=Gene;gene=proV;locus_tag=EC55989_2945
NC_011748.1	RefSeq	CDS	3015504	3016706	.	+	0	ID=cds2794;Name=YP_002403941.1;Parent=gene3004;Note=with ProWX is involved in the high-affinity uptake of glycine betaine;Dbxref=Genbank:YP_002403941.1,GeneID:7147022;gbkey=CDS;product=glycine betaine transporter ATP-binding subunit;protein_id=YP_002403941.1;transl_table=11
NC_011748.1	RefSeq	gene	3016699	3017763	.	+	.	ID=gene3005;Name=proW;Dbxref=GeneID:7147258;gbkey=Gene;gene=proW;locus_tag=EC55989_2946
NC_011748.1	RefSeq	CDS	3016699	3017763	.	+	0	ID=cds2795;Name=YP_002403942.1;Parent=gene3005;Note=with ProVX is involved in the high-affinity uptake of glycine betaine;Dbxref=Genbank:YP_002403942.1,GeneID:7147258;gbkey=CDS;product=glycine betaine transporter membrane protein;protein_id=YP_002403942.1;transl_table=11
NC_011748.1	RefSeq	gene	3017820	3018812	.	+	.	ID=gene3006;Name=proX;Dbxref=GeneID:7147259;gbkey=Gene;gene=proX;locus_tag=EC55989_2947
NC_011748.1	RefSeq	CDS	3017820	3018812	.	+	0	ID=cds2796;Name=YP_002403943.1;Parent=gene3006;Note=with ProVW%2C part of the high-affinity transport system for the osmoprotectant glycine betaine;Dbxref=Genbank:YP_002403943.1,GeneID:7147259;gbkey=CDS;product=glycine betaine transporter periplasmic subunit;protein_id=YP_002403943.1;transl_table=11
NC_011748.1	RefSeq	gene	3019004	3020188	.	+	.	ID=gene3007;Name=EC55989_2948;Dbxref=GeneID:7147260;gbkey=Gene;locus_tag=EC55989_2948
NC_011748.1	RefSeq	CDS	3019004	3020188	.	+	0	ID=cds2797;Name=YP_002403944.1;Parent=gene3007;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 16000740%3B Product type pt :  transporter;Dbxref=Genbank:YP_002403944.1,GeneID:7147260;gbkey=CDS;product=transport protein %28ousB-like%29;protein_id=YP_002403944.1;transl_table=11
NC_011748.1	RefSeq	gene	3020312	3021049	.	+	.	ID=gene3008;Name=ygaZ;Dbxref=GeneID:7144847;gbkey=Gene;gene=ygaZ;locus_tag=EC55989_2949
NC_011748.1	RefSeq	CDS	3020312	3021049	.	+	0	ID=cds2798;Name=YP_002403945.1;Parent=gene3008;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002403945.1,GeneID:7144847;gbkey=CDS;product=transporter;protein_id=YP_002403945.1;transl_table=11
NC_011748.1	RefSeq	gene	3021039	3021374	.	+	.	ID=gene3009;Name=ygaH;Dbxref=GeneID:7148798;gbkey=Gene;gene=ygaH;locus_tag=EC55989_2950
NC_011748.1	RefSeq	CDS	3021039	3021374	.	+	0	ID=cds2799;Name=YP_002403946.1;Parent=gene3009;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002403946.1,GeneID:7148798;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403946.1;transl_table=11
NC_011748.1	RefSeq	gene	3021465	3021995	.	+	.	ID=gene3010;Name=mprA;Dbxref=GeneID:7148791;gbkey=Gene;gene=mprA;locus_tag=EC55989_2951
NC_011748.1	RefSeq	CDS	3021465	3021995	.	+	0	ID=cds2800;Name=YP_002403947.1;Parent=gene3010;Note=DNA-binding transcriptional repressor of microcin B17 synthesis and multidrug efflux%3B negative regulator of the multidrug operon emrAB;Dbxref=Genbank:YP_002403947.1,GeneID:7148791;gbkey=CDS;product=transcriptional repressor MprA;protein_id=YP_002403947.1;transl_table=11
NC_011748.1	RefSeq	gene	3022122	3023294	.	+	.	ID=gene3011;Name=emrA;Dbxref=GeneID:7146893;gbkey=Gene;gene=emrA;locus_tag=EC55989_2952
NC_011748.1	RefSeq	CDS	3022122	3023294	.	+	0	ID=cds2801;Name=YP_002403948.1;Parent=gene3011;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 21450803%2C 93285984%2C 94262163%2C 1409590%2C 8203018%3B Product type t : transporter;Dbxref=Genbank:YP_002403948.1,GeneID:7146893;gbkey=CDS;product=multidrug efflux system;protein_id=YP_002403948.1;transl_table=11
NC_011748.1	RefSeq	gene	3023311	3024849	.	+	.	ID=gene3012;Name=emrB;Dbxref=GeneID:7145989;gbkey=Gene;gene=emrB;locus_tag=EC55989_2953
NC_011748.1	RefSeq	CDS	3023311	3024849	.	+	0	ID=cds2802;Name=YP_002403949.1;Parent=gene3012;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 21450803%2C 93285984%2C 94262163%2C 1409590%3B Product type t : transporter;Dbxref=Genbank:YP_002403949.1,GeneID:7145989;gbkey=CDS;product=multidrug efflux system protein;protein_id=YP_002403949.1;transl_table=11
NC_011748.1	RefSeq	gene	3024913	3025428	.	-	.	ID=gene3013;Name=luxS;Dbxref=GeneID:7145990;gbkey=Gene;gene=luxS;locus_tag=EC55989_2954
NC_011748.1	RefSeq	CDS	3024913	3025428	.	-	0	ID=cds2803;Name=YP_002403950.1;Parent=gene3013;Note=catalyzes the hydrolysis of S-ribosylhomocysteine to homocysteine and autoinducer-2;Dbxref=Genbank:YP_002403950.1,GeneID:7145990;gbkey=CDS;product=S-ribosylhomocysteinase;protein_id=YP_002403950.1;transl_table=11
NC_011748.1	RefSeq	gene	3025497	3025570	.	+	.	ID=gene3014;Name=micA;Dbxref=GeneID:7146754;gbkey=Gene;gene=micA;locus_tag=EC55989_misc_RNA_63
NC_011748.1	RefSeq	transcript	3025497	3025570	.	+	.	ID=rna120;Parent=gene3014;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 16204185%3B Product type n : RNA;Dbxref=GeneID:7146754;gbkey=misc_RNA;product=MicA
NC_011748.1	RefSeq	exon	3025497	3025570	.	+	.	ID=id245;Parent=rna120;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 16204185%3B Product type n : RNA;Dbxref=GeneID:7146754;gbkey=misc_RNA;product=MicA
NC_011748.1	RefSeq	gene	3025578	3027134	.	-	.	ID=gene3015;Name=gshA;Dbxref=GeneID:7146854;gbkey=Gene;gene=gshA;locus_tag=EC55989_2955
NC_011748.1	RefSeq	CDS	3025578	3027134	.	-	0	ID=cds2804;Name=YP_002403951.1;Parent=gene3015;Note=involved in the first step of glutathione biosynthesis;Dbxref=Genbank:YP_002403951.1,GeneID:7146854;gbkey=CDS;product=glutamate--cysteine ligase;protein_id=YP_002403951.1;transl_table=11
NC_011748.1	RefSeq	gene	3027207	3027635	.	-	.	ID=gene3016;Name=yqaA;Dbxref=GeneID:7146373;gbkey=Gene;gene=yqaA;locus_tag=EC55989_2956
NC_011748.1	RefSeq	CDS	3027207	3027635	.	-	0	ID=cds2805;Name=YP_002403952.1;Parent=gene3016;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002403952.1,GeneID:7146373;gbkey=CDS;product=inner membrane protein;protein_id=YP_002403952.1;transl_table=11
NC_011748.1	RefSeq	gene	3027632	3028198	.	-	.	ID=gene3017;Name=yqaB;Dbxref=GeneID:7149389;gbkey=Gene;gene=yqaB;locus_tag=EC55989_2957
NC_011748.1	RefSeq	CDS	3027632	3028198	.	-	0	ID=cds2806;Name=YP_002403953.1;Parent=gene3017;Note=YqaB%3B catalyzes the dephosphorylation of fructose 1-phosphate%2C 6-phosphogluconate and p-nitrophenyl phosphate %28pNPP%29%3B presents beta-phosphoglucomutase activity at a lower extent;Dbxref=Genbank:YP_002403953.1,GeneID:7149389;gbkey=CDS;product=fructose-1-phosphatase;protein_id=YP_002403953.1;transl_table=11
NC_011748.1	RefSeq	gene	3028479	3028555	.	-	.	ID=gene3018;Name=EC55989_tRNA71;Dbxref=GeneID:7149390;gbkey=Gene;locus_tag=EC55989_tRNA71
NC_011748.1	RefSeq	tRNA	3028479	3028555	.	-	.	ID=rna121;Dbxref=GeneID:7149390;gbkey=tRNA;product=tRNA-Arg
NC_011748.1	RefSeq	exon	3028479	3028555	.	-	.	ID=id246;Parent=rna121;Dbxref=GeneID:7149390;gbkey=tRNA;product=tRNA-Arg
NC_011748.1	RefSeq	gene	3028754	3028830	.	-	.	ID=gene3019;Name=EC55989_tRNA70;Dbxref=GeneID:7145385;gbkey=Gene;locus_tag=EC55989_tRNA70
NC_011748.1	RefSeq	tRNA	3028754	3028830	.	-	.	ID=rna122;Dbxref=GeneID:7145385;gbkey=tRNA;product=tRNA-Arg
NC_011748.1	RefSeq	exon	3028754	3028830	.	-	.	ID=id247;Parent=rna122;Dbxref=GeneID:7145385;gbkey=tRNA;product=tRNA-Arg
NC_011748.1	RefSeq	gene	3029029	3029105	.	-	.	ID=gene3020;Name=EC55989_tRNA69;Dbxref=GeneID:7145384;gbkey=Gene;locus_tag=EC55989_tRNA69
NC_011748.1	RefSeq	tRNA	3029029	3029105	.	-	.	ID=rna123;Dbxref=GeneID:7145384;gbkey=tRNA;product=tRNA-Arg
NC_011748.1	RefSeq	exon	3029029	3029105	.	-	.	ID=id248;Parent=rna123;Dbxref=GeneID:7145384;gbkey=tRNA;product=tRNA-Arg
NC_011748.1	RefSeq	gene	3029303	3029379	.	-	.	ID=gene3021;Name=EC55989_tRNA68;Dbxref=GeneID:7145382;gbkey=Gene;locus_tag=EC55989_tRNA68
NC_011748.1	RefSeq	tRNA	3029303	3029379	.	-	.	ID=rna124;Dbxref=GeneID:7145382;gbkey=tRNA;product=tRNA-Arg
NC_011748.1	RefSeq	exon	3029303	3029379	.	-	.	ID=id249;Parent=rna124;Dbxref=GeneID:7145382;gbkey=tRNA;product=tRNA-Arg
NC_011748.1	RefSeq	gene	3029383	3029475	.	-	.	ID=gene3022;Name=EC55989_tRNA67;Dbxref=GeneID:7145381;gbkey=Gene;locus_tag=EC55989_tRNA67
NC_011748.1	RefSeq	tRNA	3029383	3029475	.	-	.	ID=rna125;Dbxref=GeneID:7145381;gbkey=tRNA;product=tRNA-Ser
NC_011748.1	RefSeq	exon	3029383	3029475	.	-	.	ID=id250;Parent=rna125;Dbxref=GeneID:7145381;gbkey=tRNA;product=tRNA-Ser
NC_011748.1	RefSeq	gene	3029791	3029976	.	-	.	ID=gene3023;Name=csrA;Dbxref=GeneID:7145380;gbkey=Gene;gene=csrA;locus_tag=EC55989_2958
NC_011748.1	RefSeq	CDS	3029791	3029976	.	-	0	ID=cds2807;Name=YP_002403954.1;Parent=gene3023;Note=affects carbohydrate metabolism%3B has regulatory role in many processes;Dbxref=Genbank:YP_002403954.1,GeneID:7145380;gbkey=CDS;product=carbon storage regulator;protein_id=YP_002403954.1;transl_table=11
NC_011748.1	RefSeq	gene	3030211	3032841	.	-	.	ID=gene3024;Name=alaS;Dbxref=GeneID:7145783;gbkey=Gene;gene=alaS;locus_tag=EC55989_2959
NC_011748.1	RefSeq	CDS	3030211	3032841	.	-	0	ID=cds2808;Name=YP_002403955.1;Parent=gene3024;Note=Catalyzes a two-step reaction%2C first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA;Dbxref=Genbank:YP_002403955.1,GeneID:7145783;gbkey=CDS;product=alanyl-tRNA synthetase;protein_id=YP_002403955.1;transl_table=11
NC_011748.1	RefSeq	gene	3032969	3033469	.	-	.	ID=gene3025;Name=recX;Dbxref=GeneID:7145478;gbkey=Gene;gene=recX;locus_tag=EC55989_2960
NC_011748.1	RefSeq	CDS	3032969	3033469	.	-	0	ID=cds2809;Name=YP_002403956.1;Parent=gene3025;Note=binds RecA and inhibits RecA-mediated DNA strand exchange and ATP hydrolysis and coprotease activities;Dbxref=Genbank:YP_002403956.1,GeneID:7145478;gbkey=CDS;product=recombination regulator RecX;protein_id=YP_002403956.1;transl_table=11
NC_011748.1	RefSeq	gene	3033712	3034773	.	-	.	ID=gene3026;Name=recA;Dbxref=GeneID:7147368;gbkey=Gene;gene=recA;locus_tag=EC55989_2961
NC_011748.1	RefSeq	CDS	3033712	3034773	.	-	0	ID=cds2810;Name=YP_002403957.1;Parent=gene3026;Note=catalyzes the hydrolysis of ATP in the presence of single-stranded DNA%2C the ATP-dependent uptake of single-stranded DNA by duplex DNA%2C and the ATP-dependent hybridization of homologous single-stranded DNAs;Dbxref=Genbank:YP_002403957.1,GeneID:7147368;gbkey=CDS;product=recombinase A;protein_id=YP_002403957.1;transl_table=11
NC_011748.1	RefSeq	gene	3034853	3035350	.	-	.	ID=gene3027;Name=ygaD;Dbxref=GeneID:7147357;gbkey=Gene;gene=ygaD;locus_tag=EC55989_2962
NC_011748.1	RefSeq	CDS	3034853	3035350	.	-	0	ID=cds2811;Name=YP_002403958.1;Parent=gene3027;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403958.1,GeneID:7147357;gbkey=CDS;product=competence damage-inducible protein A;protein_id=YP_002403958.1;transl_table=11
NC_011748.1	RefSeq	gene	3035495	3036580	.	-	.	ID=gene3028;Name=mltB;Dbxref=GeneID:7148789;gbkey=Gene;gene=mltB;locus_tag=EC55989_2963
NC_011748.1	RefSeq	CDS	3035495	3036580	.	-	0	ID=cds2812;Name=YP_002403959.1;Parent=gene3028;Note=membrane-bound lytic murein transglycosylase B%3B catalyzes the cleavage of the glycosidic bonds between N-acetylmuramic acid and N-acetylglucosamine in peptidoglycan;Dbxref=Genbank:YP_002403959.1,GeneID:7148789;gbkey=CDS;product=murein hydrolase B;protein_id=YP_002403959.1;transl_table=11
NC_011748.1	RefSeq	gene	3036836	3037399	.	+	.	ID=gene3029;Name=srlA;Dbxref=GeneID:7146864;gbkey=Gene;gene=srlA;locus_tag=EC55989_2964
NC_011748.1	RefSeq	CDS	3036836	3037399	.	+	0	ID=cds2813;Name=YP_002403960.1;Parent=gene3029;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 87194727%2C 1334233%2C 3553176%3B Product type t : transporter;Dbxref=Genbank:YP_002403960.1,GeneID:7146864;gbkey=CDS;product=PTS system glucitol%2Fsorbitol-specific transporter subunit IIC;protein_id=YP_002403960.1;transl_table=11
NC_011748.1	RefSeq	gene	3037396	3038355	.	+	.	ID=gene3030;Name=srlE;Dbxref=GeneID:7147702;gbkey=Gene;gene=srlE;locus_tag=EC55989_2965
NC_011748.1	RefSeq	CDS	3037396	3038355	.	+	0	ID=cds2814;Name=YP_002403961.1;Parent=gene3030;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 1100602%2C 3553176%3B Product type t : transporter;Dbxref=Genbank:YP_002403961.1,GeneID:7147702;gbkey=CDS;product=glucitol%2Fsorbitol-specific enzyme IIB component of PTS;protein_id=YP_002403961.1;transl_table=11
NC_011748.1	RefSeq	gene	3038366	3038737	.	+	.	ID=gene3031;Name=srlB;Dbxref=GeneID:7147705;gbkey=Gene;gene=srlB;locus_tag=EC55989_2966
NC_011748.1	RefSeq	CDS	3038366	3038737	.	+	0	ID=cds2815;Name=YP_002403962.1;Parent=gene3031;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;Dbxref=Genbank:YP_002403962.1,GeneID:7147705;gbkey=CDS;product=PTS system glucitol%2Fsorbitol-specific transporter subunit IIA;protein_id=YP_002403962.1;transl_table=11
NC_011748.1	RefSeq	gene	3038741	3039520	.	+	.	ID=gene3032;Name=srlD;Dbxref=GeneID:7147703;gbkey=Gene;gene=srlD;locus_tag=EC55989_2967
NC_011748.1	RefSeq	CDS	3038741	3039520	.	+	0	ID=cds2816;Name=YP_002403963.1;Parent=gene3032;Note=catalyzes the conversion of sorbitol 6-phosphate into fructose 6-phosphate;Dbxref=Genbank:YP_002403963.1,GeneID:7147703;gbkey=CDS;product=sorbitol-6-phosphate dehydrogenase;protein_id=YP_002403963.1;transl_table=11
NC_011748.1	RefSeq	gene	3039625	3039984	.	+	.	ID=gene3033;Name=gutM;Dbxref=GeneID:7147704;gbkey=Gene;gene=gutM;locus_tag=EC55989_2968
NC_011748.1	RefSeq	CDS	3039625	3039984	.	+	0	ID=cds2817;Name=YP_002403964.1;Parent=gene3033;Note=regulator for glucitol utilization;Dbxref=Genbank:YP_002403964.1,GeneID:7147704;gbkey=CDS;product=DNA-binding transcriptional activator GutM;protein_id=YP_002403964.1;transl_table=11
NC_011748.1	RefSeq	gene	3040051	3040824	.	+	.	ID=gene3034;Name=srlR;Dbxref=GeneID:7146386;gbkey=Gene;gene=srlR;locus_tag=EC55989_2969
NC_011748.1	RefSeq	CDS	3040051	3040824	.	+	0	ID=cds2818;Name=YP_002403965.1;Parent=gene3034;Note=regulates genes involved in glucitol utilization;Dbxref=Genbank:YP_002403965.1,GeneID:7146386;gbkey=CDS;product=DNA-binding transcriptional repressor SrlR;protein_id=YP_002403965.1;transl_table=11
NC_011748.1	RefSeq	gene	3040817	3041782	.	+	.	ID=gene3035;Name=gutQ;Dbxref=GeneID:7147706;gbkey=Gene;gene=gutQ;locus_tag=EC55989_2970
NC_011748.1	RefSeq	CDS	3040817	3041782	.	+	0	ID=cds2819;Name=YP_002403966.1;Parent=gene3035;Note=catalyzes the conversion of D-arabinose 5-phosphate to D-ribulose-5-phosphate;Dbxref=Genbank:YP_002403966.1,GeneID:7147706;gbkey=CDS;product=D-arabinose 5-phosphate isomerase;protein_id=YP_002403966.1;transl_table=11
NC_011748.1	RefSeq	gene	3041779	3043293	.	-	.	ID=gene3036;Name=norR;Dbxref=GeneID:7146387;gbkey=Gene;gene=norR;locus_tag=EC55989_2971
NC_011748.1	RefSeq	CDS	3041779	3043293	.	-	0	ID=cds2820;Name=YP_002403967.1;Parent=gene3036;Note=Required for the expression of anaerobic nitric oxide %28NO%29 reductase%3B acts as a transcriptional activator for the norVW operon;Dbxref=Genbank:YP_002403967.1,GeneID:7146387;gbkey=CDS;product=anaerobic nitric oxide reductase transcriptional regulator;protein_id=YP_002403967.1;transl_table=11
NC_011748.1	RefSeq	gene	3043480	3044919	.	+	.	ID=gene3037;Name=norV;Dbxref=GeneID:7147014;gbkey=Gene;gene=norV;locus_tag=EC55989_2972
NC_011748.1	RefSeq	CDS	3043480	3044919	.	+	0	ID=cds2821;Name=YP_002403968.1;Parent=gene3037;Note=detoxifies nitric oxide using NADH;Dbxref=Genbank:YP_002403968.1,GeneID:7147014;gbkey=CDS;product=anaerobic nitric oxide reductase flavorubredoxin;protein_id=YP_002403968.1;transl_table=11
NC_011748.1	RefSeq	gene	3044916	3046049	.	+	.	ID=gene3038;Name=norW;Dbxref=GeneID:7147015;gbkey=Gene;gene=norW;locus_tag=EC55989_2973
NC_011748.1	RefSeq	CDS	3044916	3046049	.	+	0	ID=cds2822;Name=YP_002403969.1;Parent=gene3038;Note=catalyzes the reduction of the rubredoxin moiety of nitric oxide reductase;Dbxref=Genbank:YP_002403969.1,GeneID:7147015;gbkey=CDS;product=nitric oxide reductase;protein_id=YP_002403969.1;transl_table=11
NC_011748.1	RefSeq	gene	3046157	3046268	.	+	.	ID=gene3039;Name=C0664;Dbxref=GeneID:7147016;gbkey=Gene;gene=C0664;locus_tag=EC55989_misc_RNA_64
NC_011748.1	RefSeq	transcript	3046157	3046268	.	+	.	ID=rna126;Parent=gene3039;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 12202758%3B Product type n : RNA;Dbxref=GeneID:7147016;gbkey=misc_RNA;product=C0664
NC_011748.1	RefSeq	exon	3046157	3046268	.	+	.	ID=id251;Parent=rna126;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 12202758%3B Product type n : RNA;Dbxref=GeneID:7147016;gbkey=misc_RNA;product=C0664
NC_011748.1	RefSeq	gene	3046275	3048527	.	-	.	ID=gene3040;Name=hypF;Dbxref=GeneID:7145652;gbkey=Gene;gene=hypF;locus_tag=EC55989_2974
NC_011748.1	RefSeq	CDS	3046275	3048527	.	-	0	ID=cds2823;Name=YP_002403970.1;Parent=gene3040;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 12377778%2C 92255260%2C 8661925%3B Product type e : enzyme;Dbxref=Genbank:YP_002403970.1,GeneID:7145652;gbkey=CDS;product=carbamoyl phosphate phosphatase and maturation protein for %5BNiFe%5D hydrogenases;protein_id=YP_002403970.1;transl_table=11
NC_011748.1	RefSeq	gene	3048680	3049207	.	-	.	ID=gene3041;Name=hydN;Dbxref=GeneID:7146525;gbkey=Gene;gene=hydN;locus_tag=EC55989_2975
NC_011748.1	RefSeq	CDS	3048680	3049207	.	-	0	ID=cds2824;Name=YP_002403971.1;Parent=gene3041;Note=involved in electron transport from formate to hydrogen;Dbxref=Genbank:YP_002403971.1,GeneID:7146525;gbkey=CDS;product=electron transport protein HydN;protein_id=YP_002403971.1;transl_table=11
NC_011748.1	RefSeq	gene	3049356	3050369	.	-	.	ID=gene3042;Name=ascG;Dbxref=GeneID:7146505;gbkey=Gene;gene=ascG;locus_tag=EC55989_2976
NC_011748.1	RefSeq	CDS	3049356	3050369	.	-	0	ID=cds2825;Name=YP_002403972.1;Parent=gene3042;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 88297127%2C 92334140%2C 1630307%3B Product type r : regulator;Dbxref=Genbank:YP_002403972.1,GeneID:7146505;gbkey=CDS;product=DNA-binding transcriptional repressor;protein_id=YP_002403972.1;transl_table=11
NC_011748.1	RefSeq	gene	3050626	3052083	.	+	.	ID=gene3043;Name=ascF;Dbxref=GeneID:7145562;gbkey=Gene;gene=ascF;locus_tag=EC55989_2977
NC_011748.1	RefSeq	CDS	3050626	3052083	.	+	0	ID=cds2826;Name=YP_002403973.1;Parent=gene3043;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;Dbxref=Genbank:YP_002403973.1,GeneID:7145562;gbkey=CDS;product=PTS system cellobiose%2Farbutin%2Fsalicin-specific transporter subunit IIBC;protein_id=YP_002403973.1;transl_table=11
NC_011748.1	RefSeq	gene	3052092	3053516	.	+	.	ID=gene3044;Name=ascB;Dbxref=GeneID:7145561;gbkey=Gene;gene=ascB;locus_tag=EC55989_2978
NC_011748.1	RefSeq	CDS	3052092	3053516	.	+	0	ID=cds2827;Name=YP_002403974.1;Parent=gene3044;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 88297127%2C 92334140%2C 1630307%3B Product type e : enzyme;Dbxref=Genbank:YP_002403974.1,GeneID:7145561;gbkey=CDS;product=cryptic 6-phospho-beta-glucosidase;protein_id=YP_002403974.1;transl_table=11
NC_011748.1	RefSeq	gene	3053684	3054664	.	-	.	ID=gene3045;Name=EC55989_2979;Dbxref=GeneID:7145560;gbkey=Gene;locus_tag=EC55989_2979
NC_011748.1	RefSeq	CDS	3053684	3054664	.	-	0	ID=cds2828;Name=YP_002403975.1;Parent=gene3045;Note=Evidence 2b : Function of strongly homologous gene%3B Product type e : enzyme;Dbxref=Genbank:YP_002403975.1,GeneID:7145560;gbkey=CDS;product=transposase%2C IS110 family;protein_id=YP_002403975.1;transl_table=11
NC_011748.1	RefSeq	gene	3054909	3055394	.	-	.	ID=gene3046;Name=EC55989_2981;Dbxref=GeneID:7144848;gbkey=Gene;locus_tag=EC55989_2981
NC_011748.1	RefSeq	CDS	3054909	3055394	.	-	0	ID=cds2829;Name=YP_002403976.1;Parent=gene3046;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pr :  regulator;Dbxref=Genbank:YP_002403976.1,GeneID:7144848;gbkey=CDS;product=HTH-type transcriptional regulator ygjM;protein_id=YP_002403976.1;transl_table=11
NC_011748.1	RefSeq	gene	3055399	3056172	.	-	.	ID=gene3047;Name=EC55989_2982;Dbxref=GeneID:7144849;gbkey=Gene;locus_tag=EC55989_2982
NC_011748.1	RefSeq	CDS	3055399	3056172	.	-	0	ID=cds2830;Name=YP_002403977.1;Parent=gene3047;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403977.1,GeneID:7144849;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403977.1;transl_table=11
NC_011748.1	RefSeq	gene	3056197	3056667	.	-	.	ID=gene3048;Name=hycI;Dbxref=GeneID:7144850;gbkey=Gene;gene=hycI;locus_tag=EC55989_2983
NC_011748.1	RefSeq	CDS	3056197	3056667	.	-	0	ID=cds2831;Name=YP_002403978.1;Parent=gene3048;Note=involved in the C-terminal processing of the large subunit of hydrogenase 3 HycE;Dbxref=Genbank:YP_002403978.1,GeneID:7144850;gbkey=CDS;product=hydrogenase 3 maturation protease;protein_id=YP_002403978.1;transl_table=11
NC_011748.1	RefSeq	gene	3056660	3057070	.	-	.	ID=gene3049;Name=hycH;Dbxref=GeneID:7146504;gbkey=Gene;gene=hycH;locus_tag=EC55989_2984
NC_011748.1	RefSeq	CDS	3056660	3057070	.	-	0	ID=cds2832;Name=YP_002403979.1;Parent=gene3049;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 92215587%2C 92326636%2C 1625581%2C 2187144%2C 7851435%3B Product type f : factor;Dbxref=Genbank:YP_002403979.1,GeneID:7146504;gbkey=CDS;product=protein required for maturation of hydrogenase 3;protein_id=YP_002403979.1;transl_table=11
NC_011748.1	RefSeq	gene	3057067	3057834	.	-	.	ID=gene3050;Name=hycG;Dbxref=GeneID:7146503;gbkey=Gene;gene=hycG;locus_tag=EC55989_2985
NC_011748.1	RefSeq	CDS	3057067	3057834	.	-	0	ID=cds2833;Name=YP_002403980.1;Parent=gene3050;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 90251163%2C 92215587%2C 92326636%2C 2187144%3B Product type e : enzyme;Dbxref=Genbank:YP_002403980.1,GeneID:7146503;gbkey=CDS;product=hydrogenase 3 and formate hydrogenase complex%2C HycG subunit;protein_id=YP_002403980.1;transl_table=11
NC_011748.1	RefSeq	gene	3057834	3058376	.	-	.	ID=gene3051;Name=hycF;Dbxref=GeneID:7146502;gbkey=Gene;gene=hycF;locus_tag=EC55989_2986
NC_011748.1	RefSeq	CDS	3057834	3058376	.	-	0	ID=cds2834;Name=YP_002403981.1;Parent=gene3051;Note=electron transfer protein for hydrogenase-3%3B the formate hydrogenlyase complex comprises of a formate dehydrogenase%2C unidentified electron carriers and hydrogenase-3%3B in this non-energy conserving pathway%2C molecular hydrogen and carbodioxide are released from formate;Dbxref=Genbank:YP_002403981.1,GeneID:7146502;gbkey=CDS;product=formate hydrogenlyase complex iron-sulfur subunit;protein_id=YP_002403981.1;transl_table=11
NC_011748.1	RefSeq	gene	3058386	3060095	.	-	.	ID=gene3052;Name=hycE;Dbxref=GeneID:7146501;gbkey=Gene;gene=hycE;locus_tag=EC55989_2987
NC_011748.1	RefSeq	CDS	3058386	3060095	.	-	0	ID=cds2835;Name=YP_002403982.1;Parent=gene3052;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 92215587%2C 92326636%2C 94170785%2C 2187144%2C 8125094%3B Product type e : enzyme;Dbxref=Genbank:YP_002403982.1,GeneID:7146501;gbkey=CDS;product=hydrogenase 3%2C large subunit;protein_id=YP_002403982.1;transl_table=11
NC_011748.1	RefSeq	gene	3060113	3061036	.	-	.	ID=gene3053;Name=hycD;Dbxref=GeneID:7146500;gbkey=Gene;gene=hycD;locus_tag=EC55989_2988
NC_011748.1	RefSeq	CDS	3060113	3061036	.	-	0	ID=cds2836;Name=YP_002403983.1;Parent=gene3053;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 90251163%2C 92215587%2C 92326636%3B Product type m : membrane component;Dbxref=Genbank:YP_002403983.1,GeneID:7146500;gbkey=CDS;product=hydrogenase 3%2C membrane subunit;protein_id=YP_002403983.1;transl_table=11
NC_011748.1	RefSeq	gene	3061039	3062865	.	-	.	ID=gene3054;Name=hycC;Dbxref=GeneID:7146499;gbkey=Gene;gene=hycC;locus_tag=EC55989_2989
NC_011748.1	RefSeq	CDS	3061039	3062865	.	-	0	ID=cds2837;Name=YP_002403984.1;Parent=gene3054;Note=catalyzes the oxidation of formate to carbon dioxide and molecular hydrogen%3B formate hydrogenlyase comprises of a formate dehydrogenase%2C unidentified electron carriers and a hydrogenase %28subunit 3%29;Dbxref=Genbank:YP_002403984.1,GeneID:7146499;gbkey=CDS;product=formate hydrogenlyase subunit 3;protein_id=YP_002403984.1;transl_table=11
NC_011748.1	RefSeq	gene	3062862	3063473	.	-	.	ID=gene3055;Name=hycB;Dbxref=GeneID:7146498;gbkey=Gene;gene=hycB;locus_tag=EC55989_2990
NC_011748.1	RefSeq	CDS	3062862	3063473	.	-	0	ID=cds2838;Name=YP_002403985.1;Parent=gene3055;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 90251163%2C 92215587%2C 92326636%2C 2187144%3B Product type c : carrier;Dbxref=Genbank:YP_002403985.1,GeneID:7146498;gbkey=CDS;product=hydrogenase 3%2C Fe-S subunit;protein_id=YP_002403985.1;transl_table=11
NC_011748.1	RefSeq	gene	3063598	3064059	.	-	.	ID=gene3056;Name=hycA;Dbxref=GeneID:7146497;gbkey=Gene;gene=hycA;locus_tag=EC55989_2991
NC_011748.1	RefSeq	CDS	3063598	3064059	.	-	0	ID=cds2839;Name=YP_002403986.1;Parent=gene3056;Note=regulates several genes involved in the formate hydrogenlyase system%3B seems to prevent binding of FhlA transcriptional activator to the activator sequence of hyc operon;Dbxref=Genbank:YP_002403986.1,GeneID:7146497;gbkey=CDS;product=formate hydrogenlyase regulatory protein HycA;protein_id=YP_002403986.1;transl_table=11
NC_011748.1	RefSeq	gene	3064270	3064620	.	+	.	ID=gene3057;Name=hypA;Dbxref=GeneID:7146496;gbkey=Gene;gene=hypA;locus_tag=EC55989_2993
NC_011748.1	RefSeq	CDS	3064270	3064620	.	+	0	ID=cds2840;Name=YP_002403987.1;Parent=gene3057;Note=plays a role in hydrogenase nickel cofactor insertion;Dbxref=Genbank:YP_002403987.1,GeneID:7146496;gbkey=CDS;product=hydrogenase nickel incorporation protein;protein_id=YP_002403987.1;transl_table=11
NC_011748.1	RefSeq	gene	3064624	3065496	.	+	.	ID=gene3058;Name=hypB;Dbxref=GeneID:7146520;gbkey=Gene;gene=hypB;locus_tag=EC55989_2994
NC_011748.1	RefSeq	CDS	3064624	3065496	.	+	0	ID=cds2841;Name=YP_002403988.1;Parent=gene3058;Note=GTP hydrolase involved in nickel liganding into hydrogenases;Dbxref=Genbank:YP_002403988.1,GeneID:7146520;gbkey=CDS;product=hydrogenase nickel incorporation protein HypB;protein_id=YP_002403988.1;transl_table=11
NC_011748.1	RefSeq	gene	3065487	3065759	.	+	.	ID=gene3059;Name=hypC;Dbxref=GeneID:7146521;gbkey=Gene;gene=hypC;locus_tag=EC55989_2995
NC_011748.1	RefSeq	CDS	3065487	3065759	.	+	0	ID=cds2842;Name=YP_002403989.1;Parent=gene3059;Note=HypC%3B accessory protein necessary for maturation of the hydrogenase isoforms 1%2C 2 and 3%3B forms a complex with HypD%2C HypE%2C and HypF proteins%2C which is the site of ligand biosynthesis and attachment to the iron atom of the NiFe site in the hydrogenase;Dbxref=Genbank:YP_002403989.1,GeneID:7146521;gbkey=CDS;product=hydrogenase assembly chaperone;protein_id=YP_002403989.1;transl_table=11
NC_011748.1	RefSeq	gene	3065759	3066880	.	+	.	ID=gene3060;Name=hypD;Dbxref=GeneID:7146522;gbkey=Gene;gene=hypD;locus_tag=EC55989_2996
NC_011748.1	RefSeq	CDS	3065759	3066880	.	+	0	ID=cds2843;Name=YP_002403990.1;Parent=gene3060;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 91194542%2C 92255260%2C 1849603%3B Product type f : factor;Dbxref=Genbank:YP_002403990.1,GeneID:7146522;gbkey=CDS;product=hydrogenase maturation protein;protein_id=YP_002403990.1;transl_table=11
NC_011748.1	RefSeq	gene	3066919	3067887	.	+	.	ID=gene3061;Name=hypE;Dbxref=GeneID:7146523;gbkey=Gene;gene=hypE;locus_tag=EC55989_2997
NC_011748.1	RefSeq	CDS	3066919	3067887	.	+	0	ID=cds2844;Name=YP_002403991.1;Parent=gene3061;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 91194542%2C 9485446%2C 1849603%3B Product type e : enzyme;Dbxref=Genbank:YP_002403991.1,GeneID:7146523;gbkey=CDS;product=carbamoyl phosphate phosphatase%2C hydrogenase 3 maturation protein;protein_id=YP_002403991.1;transl_table=11
NC_011748.1	RefSeq	gene	3067961	3070039	.	+	.	ID=gene3062;Name=fhlA;Dbxref=GeneID:7146524;gbkey=Gene;gene=fhlA;locus_tag=EC55989_2998
NC_011748.1	RefSeq	CDS	3067961	3070039	.	+	0	ID=cds2845;Name=YP_002403992.1;Parent=gene3062;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 20307603%2C 21557168%2C 90368529%2C 92140045%2C 94018617%2C 2118503%2C 2280686%3B Product type r : regulator;Dbxref=Genbank:YP_002403992.1,GeneID:7146524;gbkey=CDS;product=DNA-binding transcriptional activator;protein_id=YP_002403992.1;transl_table=11
NC_011748.1	RefSeq	gene	3070076	3070429	.	-	.	ID=gene3063;Name=ygbA;Dbxref=GeneID:7146098;gbkey=Gene;gene=ygbA;locus_tag=EC55989_2999
NC_011748.1	RefSeq	CDS	3070076	3070429	.	-	0	ID=cds2846;Name=YP_002403993.1;Parent=gene3063;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002403993.1,GeneID:7146098;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403993.1;transl_table=11
NC_011748.1	RefSeq	gene	3070716	3073277	.	+	.	ID=gene3064;Name=mutS;Dbxref=GeneID:7148799;gbkey=Gene;gene=mutS;locus_tag=EC55989_3000
NC_011748.1	RefSeq	CDS	3070716	3073277	.	+	0	ID=cds2847;Name=YP_002403994.1;Parent=gene3064;Note=This protein performs the mismatch recognition step during the DNA repair process;Dbxref=Genbank:YP_002403994.1,GeneID:7148799;gbkey=CDS;product=DNA mismatch repair protein MutS;protein_id=YP_002403994.1;transl_table=11
NC_011748.1	RefSeq	gene	3073383	3074039	.	+	.	ID=gene3065;Name=pphB;Dbxref=GeneID:7146934;gbkey=Gene;gene=pphB;locus_tag=EC55989_3001
NC_011748.1	RefSeq	CDS	3073383	3074039	.	+	0	ID=cds2848;Name=YP_002403995.1;Parent=gene3065;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 9130712%3B Product type e : enzyme;Dbxref=Genbank:YP_002403995.1,GeneID:7146934;gbkey=CDS;product=serine%2Fthreonine-specific protein phosphatase 2;protein_id=YP_002403995.1;transl_table=11
NC_011748.1	RefSeq	gene	3074090	3074887	.	-	.	ID=gene3066;Name=ygbI;Dbxref=GeneID:7147227;gbkey=Gene;gene=ygbI;locus_tag=EC55989_3002
NC_011748.1	RefSeq	CDS	3074090	3074887	.	-	0	ID=cds2849;Name=YP_002403996.1;Parent=gene3066;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pr :  regulator;Dbxref=Genbank:YP_002403996.1,GeneID:7147227;gbkey=CDS;product=DNA-binding transcriptional regulator;protein_id=YP_002403996.1;transl_table=11
NC_011748.1	RefSeq	gene	3075053	3075961	.	+	.	ID=gene3067;Name=ygbJ;Dbxref=GeneID:7148802;gbkey=Gene;gene=ygbJ;locus_tag=EC55989_3003
NC_011748.1	RefSeq	CDS	3075053	3075961	.	+	0	ID=cds2850;Name=YP_002403997.1;Parent=gene3067;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002403997.1,GeneID:7148802;gbkey=CDS;product=dehydrogenase%2C with NAD%28P%29-binding Rossmann-fold domain;protein_id=YP_002403997.1;transl_table=11
NC_011748.1	RefSeq	gene	3075958	3077220	.	+	.	ID=gene3068;Name=ygbK;Dbxref=GeneID:7148803;gbkey=Gene;gene=ygbK;locus_tag=EC55989_3004
NC_011748.1	RefSeq	CDS	3075958	3077220	.	+	0	ID=cds2851;Name=YP_002403998.1;Parent=gene3068;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 11520622;Dbxref=Genbank:YP_002403998.1,GeneID:7148803;gbkey=CDS;product=hypothetical protein;protein_id=YP_002403998.1;transl_table=11
NC_011748.1	RefSeq	gene	3077217	3077855	.	+	.	ID=gene3069;Name=ygbL;Dbxref=GeneID:7148804;gbkey=Gene;gene=ygbL;locus_tag=EC55989_3005
NC_011748.1	RefSeq	CDS	3077217	3077855	.	+	0	ID=cds2852;Name=YP_002403999.1;Parent=gene3069;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002403999.1,GeneID:7148804;gbkey=CDS;product=aldolase;protein_id=YP_002403999.1;transl_table=11
NC_011748.1	RefSeq	gene	3077860	3078636	.	+	.	ID=gene3070;Name=ygbM;Dbxref=GeneID:7148805;gbkey=Gene;gene=ygbM;locus_tag=EC55989_3006
NC_011748.1	RefSeq	CDS	3077860	3078636	.	+	0	ID=cds2853;Name=YP_002404000.1;Parent=gene3070;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404000.1,GeneID:7148805;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404000.1;transl_table=11
NC_011748.1	RefSeq	gene	3078725	3080089	.	+	.	ID=gene3071;Name=ygbN;Dbxref=GeneID:7148806;gbkey=Gene;gene=ygbN;locus_tag=EC55989_3007
NC_011748.1	RefSeq	CDS	3078725	3080089	.	+	0	ID=cds2854;Name=YP_002404001.1;Parent=gene3071;Note=member of the Gnt family of gluconate transporters%3B not involved in gluconate transport%3B unknown function;Dbxref=Genbank:YP_002404001.1,GeneID:7148806;gbkey=CDS;product=inner membrane permease YgbN;protein_id=YP_002404001.1;transl_table=11
NC_011748.1	RefSeq	gene	3080129	3080365	.	-	.	ID=gene3072;Name=EC55989_3008;Dbxref=GeneID:7148807;gbkey=Gene;locus_tag=EC55989_3008
NC_011748.1	RefSeq	CDS	3080129	3080365	.	-	0	ID=cds2855;Name=YP_002404002.1;Parent=gene3072;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 15979273%3B Product type e : enzyme;Dbxref=Genbank:YP_002404002.1,GeneID:7148807;gbkey=CDS;product=conserved non-oxidative reversible hydroxyarylic acid decarboxylase;protein_id=YP_002404002.1;transl_table=11
NC_011748.1	RefSeq	gene	3080376	3081803	.	-	.	ID=gene3073;Name=EC55989_3009;Dbxref=GeneID:7144851;gbkey=Gene;locus_tag=EC55989_3009
NC_011748.1	RefSeq	CDS	3080376	3081803	.	-	0	ID=cds2856;Name=YP_002404003.1;Parent=gene3073;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 15979273%3B Product type e : enzyme;Dbxref=Genbank:YP_002404003.1,GeneID:7144851;gbkey=CDS;product=conserved non-oxidative hydroxyarylic acid decarboxylase activity;protein_id=YP_002404003.1;transl_table=11
NC_011748.1	RefSeq	gene	3081803	3082396	.	-	.	ID=gene3074;Name=EC55989_3010;Dbxref=GeneID:7144852;gbkey=Gene;locus_tag=EC55989_3010
NC_011748.1	RefSeq	CDS	3081803	3082396	.	-	0	ID=cds2857;Name=YP_002404004.1;Parent=gene3074;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 15979273%3B Product type e : enzyme;Dbxref=Genbank:YP_002404004.1,GeneID:7144852;gbkey=CDS;product=conserved non-oxidative reversible hydroxyarylic acid decarboxylase;protein_id=YP_002404004.1;transl_table=11
NC_011748.1	RefSeq	gene	3082543	3082950	.	+	.	ID=gene3075;Name=EC55989_3011;Dbxref=GeneID:7144853;gbkey=Gene;locus_tag=EC55989_3011
NC_011748.1	RefSeq	CDS	3082543	3082950	.	+	0	ID=cds2858;Name=YP_002404005.1;Parent=gene3075;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 15731069%3B Product type r : regulator;Dbxref=Genbank:YP_002404005.1,GeneID:7144853;gbkey=CDS;product=Transcriptional regulator hosA;protein_id=YP_002404005.1;transl_table=11
NC_011748.1	RefSeq	gene	3083071	3084063	.	-	.	ID=gene3076;Name=rpoS;Dbxref=GeneID:7144854;gbkey=Gene;gene=rpoS;locus_tag=EC55989_3012
NC_011748.1	RefSeq	CDS	3083071	3084063	.	-	0	ID=cds2859;Name=YP_002404006.1;Parent=gene3076;Note=sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released%3B this sigma factor controls a regulon of genes required for protection against external stresses;Dbxref=Genbank:YP_002404006.1,GeneID:7144854;gbkey=CDS;product=RNA polymerase sigma factor RpoS;protein_id=YP_002404006.1;transl_table=11
NC_011748.1	RefSeq	gene	3084126	3085265	.	-	.	ID=gene3077;Name=nlpD;Dbxref=GeneID:7147502;gbkey=Gene;gene=nlpD;locus_tag=EC55989_3013
NC_011748.1	RefSeq	CDS	3084126	3085265	.	-	0	ID=cds2860;Name=YP_002404007.1;Parent=gene3077;Note=outer membrane lipoprotein involved in stationary-phase cell survival%3B similar to LppB virulence determinant from Haemophilus somnus;Dbxref=Genbank:YP_002404007.1,GeneID:7147502;gbkey=CDS;product=lipoprotein NlpD;protein_id=YP_002404007.1;transl_table=11
NC_011748.1	RefSeq	gene	3085405	3086031	.	-	.	ID=gene3078;Name=pcm;Dbxref=GeneID:7147009;gbkey=Gene;gene=pcm;locus_tag=EC55989_3015
NC_011748.1	RefSeq	CDS	3085405	3086031	.	-	0	ID=cds2861;Name=YP_002404008.1;Parent=gene3078;Note=catalyzes the methyl esterification of L-isoaspartyl residues that are formed in damaged proteins;Dbxref=Genbank:YP_002404008.1,GeneID:7147009;gbkey=CDS;product=protein-L-isoaspartate O-methyltransferase;protein_id=YP_002404008.1;transl_table=11
NC_011748.1	RefSeq	gene	3086025	3086786	.	-	.	ID=gene3079;Name=surE;Dbxref=GeneID:7147121;gbkey=Gene;gene=surE;locus_tag=EC55989_3016
NC_011748.1	RefSeq	CDS	3086025	3086786	.	-	0	ID=cds2862;Name=YP_002404009.1;Parent=gene3079;Note=catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate;Dbxref=Genbank:YP_002404009.1,GeneID:7147121;gbkey=CDS;product=stationary phase survival protein SurE;protein_id=YP_002404009.1;transl_table=11
NC_011748.1	RefSeq	gene	3086767	3087816	.	-	.	ID=gene3080;Name=truD;Dbxref=GeneID:7147741;gbkey=Gene;gene=truD;locus_tag=EC55989_3017
NC_011748.1	RefSeq	CDS	3086767	3087816	.	-	0	ID=cds2863;Name=YP_002404010.1;Parent=gene3080;Note=catalyzes the modification of U13 in tRNA%28Glu%29;Dbxref=Genbank:YP_002404010.1,GeneID:7147741;gbkey=CDS;product=tRNA pseudouridine synthase D;protein_id=YP_002404010.1;transl_table=11
NC_011748.1	RefSeq	gene	3087813	3088292	.	-	.	ID=gene3081;Name=ispF;Dbxref=GeneID:7147861;gbkey=Gene;gene=ispF;locus_tag=EC55989_3018
NC_011748.1	RefSeq	CDS	3087813	3088292	.	-	0	ID=cds2864;Name=YP_002404011.1;Parent=gene3081;Note=catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate;Dbxref=Genbank:YP_002404011.1,GeneID:7147861;gbkey=CDS;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=YP_002404011.1;transl_table=11
NC_011748.1	RefSeq	gene	3088292	3089002	.	-	.	ID=gene3082;Name=ispD;Dbxref=GeneID:7146629;gbkey=Gene;gene=ispD;locus_tag=EC55989_3019
NC_011748.1	RefSeq	CDS	3088292	3089002	.	-	0	ID=cds2865;Name=YP_002404012.1;Parent=gene3082;Note=4-diphosphocytidyl-2C-methyl-D-erythritol synthase%3B MEP cytidylyltransferase%3B MCT%3B catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate%3B involved in isoprenoid and isopentenyl-PP biosynthesis%3B forms homodimers;Dbxref=Genbank:YP_002404012.1,GeneID:7146629;gbkey=CDS;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=YP_002404012.1;transl_table=11
NC_011748.1	RefSeq	gene	3089021	3089332	.	-	.	ID=gene3083;Name=ftsB;Dbxref=GeneID:7146627;gbkey=Gene;gene=ftsB;locus_tag=EC55989_3020
NC_011748.1	RefSeq	CDS	3089021	3089332	.	-	0	ID=cds2866;Name=YP_002404013.1;Parent=gene3083;Note=forms a complex with FtsL and FtsQ%3B colocalizes to the septal region of the dividing cell%3B membrane protein;Dbxref=Genbank:YP_002404013.1,GeneID:7146627;gbkey=CDS;product=cell division protein FtsB;protein_id=YP_002404013.1;transl_table=11
NC_011748.1	RefSeq	gene	3089526	3089849	.	-	.	ID=gene3084;Name=ygbE;Dbxref=GeneID:7146211;gbkey=Gene;gene=ygbE;locus_tag=EC55989_3022
NC_011748.1	RefSeq	CDS	3089526	3089849	.	-	0	ID=cds2867;Name=YP_002404014.1;Parent=gene3084;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002404014.1,GeneID:7146211;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404014.1;transl_table=11
NC_011748.1	RefSeq	gene	3089899	3090504	.	-	.	ID=gene3085;Name=cysC;Dbxref=GeneID:7148800;gbkey=Gene;gene=cysC;locus_tag=EC55989_3023
NC_011748.1	RefSeq	CDS	3089899	3090504	.	-	0	ID=cds2868;Name=YP_002404015.1;Parent=gene3085;Note=converts ATP and adenylyl sulfate to ADP and 3%27-phosphoadenylyl sulfate%3B in Escherichia coli this enzyme functions in cysteine biosynthesis;Dbxref=Genbank:YP_002404015.1,GeneID:7148800;gbkey=CDS;product=adenylylsulfate kinase;protein_id=YP_002404015.1;transl_table=11
NC_011748.1	RefSeq	gene	3090504	3091931	.	-	.	ID=gene3086;Name=cysN;Dbxref=GeneID:7145822;gbkey=Gene;gene=cysN;locus_tag=EC55989_3024
NC_011748.1	RefSeq	CDS	3090504	3091931	.	-	0	ID=cds2869;Name=YP_002404016.1;Parent=gene3086;Note=may be GTPase that regulates ATP sulfurylase activity that is involved in converting ATP and sulfate to diphosphate and adenylylsulfate%3B in Escherichia coli this enzyme functions in cysteine biosynthesis in the first step%3B forms a heterodimer with CysD%3B part of the GTP-binding elongation factor family CysN%2FNodQ;Dbxref=Genbank:YP_002404016.1,GeneID:7145822;gbkey=CDS;product=sulfate adenylyltransferase subunit 1;protein_id=YP_002404016.1;transl_table=11
NC_011748.1	RefSeq	gene	3091933	3092841	.	-	.	ID=gene3087;Name=cysD;Dbxref=GeneID:7145831;gbkey=Gene;gene=cysD;locus_tag=EC55989_3025
NC_011748.1	RefSeq	CDS	3091933	3092841	.	-	0	ID=cds2870;Name=YP_002404017.1;Parent=gene3087;Note=with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP;Dbxref=Genbank:YP_002404017.1,GeneID:7145831;gbkey=CDS;product=sulfate adenylyltransferase subunit 2;protein_id=YP_002404017.1;transl_table=11
NC_011748.1	RefSeq	gene	3093093	3094130	.	+	.	ID=gene3088;Name=iap;Dbxref=GeneID:7145823;gbkey=Gene;gene=iap;locus_tag=EC55989_3026
NC_011748.1	RefSeq	CDS	3093093	3094130	.	+	0	ID=cds2871;Name=YP_002404018.1;Parent=gene3088;Note=catalyzes the sequential removal of 2 amino-terminal arginines from alkaline phosphatase isozyme 1 to form isozymes 2 and 3;Dbxref=Genbank:YP_002404018.1,GeneID:7145823;gbkey=CDS;product=alkaline phosphatase;protein_id=YP_002404018.1;transl_table=11
NC_011748.1	RefSeq	gene	3094398	3094691	.	-	.	ID=gene3089;Name=ygbF;Dbxref=GeneID:7146530;gbkey=Gene;gene=ygbF;locus_tag=EC55989_3027
NC_011748.1	RefSeq	CDS	3094398	3094691	.	-	0	ID=cds2872;Name=YP_002404019.1;Parent=gene3089;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404019.1,GeneID:7146530;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404019.1;transl_table=11
NC_011748.1	RefSeq	gene	3094691	3095611	.	-	.	ID=gene3090;Name=ygbT;Dbxref=GeneID:7148801;gbkey=Gene;gene=ygbT;locus_tag=EC55989_3028
NC_011748.1	RefSeq	CDS	3094691	3095611	.	-	0	ID=cds2873;Name=YP_002404020.1;Parent=gene3090;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404020.1,GeneID:7148801;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404020.1;transl_table=11
NC_011748.1	RefSeq	gene	3095608	3096396	.	-	.	ID=gene3091;Name=EC55989_3029;Dbxref=GeneID:7148808;gbkey=Gene;locus_tag=EC55989_3029
NC_011748.1	RefSeq	CDS	3095608	3096396	.	-	0	ID=cds2874;Name=YP_002404021.1;Parent=gene3091;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404021.1,GeneID:7148808;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404021.1;transl_table=11
NC_011748.1	RefSeq	gene	3096240	3096986	.	-	.	ID=gene3092;Name=EC55989_3030;Dbxref=GeneID:7144855;gbkey=Gene;locus_tag=EC55989_3030
NC_011748.1	RefSeq	CDS	3096240	3096986	.	-	0	ID=cds2875;Name=YP_002404022.1;Parent=gene3092;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404022.1,GeneID:7144855;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404022.1;transl_table=11
NC_011748.1	RefSeq	gene	3096997	3098052	.	-	.	ID=gene3093;Name=EC55989_3031;Dbxref=GeneID:7144856;gbkey=Gene;locus_tag=EC55989_3031
NC_011748.1	RefSeq	CDS	3096997	3098052	.	-	0	ID=cds2876;Name=YP_002404023.1;Parent=gene3093;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404023.1,GeneID:7144856;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404023.1;transl_table=11
NC_011748.1	RefSeq	gene	3098064	3098600	.	-	.	ID=gene3094;Name=EC55989_3032;Dbxref=GeneID:7144857;gbkey=Gene;locus_tag=EC55989_3032
NC_011748.1	RefSeq	CDS	3098064	3098600	.	-	0	ID=cds2877;Name=YP_002404024.1;Parent=gene3094;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404024.1,GeneID:7144857;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404024.1;transl_table=11
NC_011748.1	RefSeq	gene	3098597	3100228	.	-	.	ID=gene3095;Name=EC55989_3033;Dbxref=GeneID:7144858;gbkey=Gene;locus_tag=EC55989_3033
NC_011748.1	RefSeq	CDS	3098597	3100228	.	-	0	ID=cds2878;Name=YP_002404025.1;Parent=gene3095;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404025.1,GeneID:7144858;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404025.1;transl_table=11
NC_011748.1	RefSeq	gene	3100257	3102956	.	-	.	ID=gene3096;Name=EC55989_3034;Dbxref=GeneID:7144859;gbkey=Gene;locus_tag=EC55989_3034
NC_011748.1	RefSeq	CDS	3100257	3102956	.	-	0	ID=cds2879;Name=YP_002404026.1;Parent=gene3096;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404026.1,GeneID:7144859;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404026.1;transl_table=11
NC_011748.1	RefSeq	gene	3103150	3103302	.	-	.	ID=gene3097;Name=EC55989_3035;Dbxref=GeneID:7144860;gbkey=Gene;locus_tag=EC55989_3035
NC_011748.1	RefSeq	CDS	3103150	3103302	.	-	0	ID=cds2880;Name=YP_002404027.1;Parent=gene3097;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002404027.1,GeneID:7144860;gbkey=CDS;product=small toxic peptide;protein_id=YP_002404027.1;transl_table=11
NC_011748.1	RefSeq	gene	3103567	3104301	.	-	.	ID=gene3098;Name=cysH;Dbxref=GeneID:7144861;gbkey=Gene;gene=cysH;locus_tag=EC55989_3036
NC_011748.1	RefSeq	CDS	3103567	3104301	.	-	0	ID=cds2881;Name=YP_002404028.1;Parent=gene3098;Note=catalyzes the reduction of 3%27-phosphoadenylyl sulfate into sulfite;Dbxref=Genbank:YP_002404028.1,GeneID:7144861;gbkey=CDS;product=phosphoadenosine phosphosulfate reductase;protein_id=YP_002404028.1;transl_table=11
NC_011748.1	RefSeq	gene	3104375	3106087	.	-	.	ID=gene3099;Name=cysI;Dbxref=GeneID:7145826;gbkey=Gene;gene=cysI;locus_tag=EC55989_3037
NC_011748.1	RefSeq	CDS	3104375	3106087	.	-	0	ID=cds2882;Name=YP_002404029.1;Parent=gene3099;Note=hemoprotein%3B NADPH dependent%3B with the alpha subunit %28a flavoprotein%29 catalyzes the reduction of sulfite to sulfide;Dbxref=Genbank:YP_002404029.1,GeneID:7145826;gbkey=CDS;product=sulfite reductase subunit beta;protein_id=YP_002404029.1;transl_table=11
NC_011748.1	RefSeq	gene	3106087	3107886	.	-	.	ID=gene3100;Name=cysJ;Dbxref=GeneID:7145827;gbkey=Gene;gene=cysJ;locus_tag=EC55989_3038
NC_011748.1	RefSeq	CDS	3106087	3107886	.	-	0	ID=cds2883;Name=YP_002404030.1;Parent=gene3100;Note=catalyzes the reduction of sulfite to sulfide in the biosynthesis of L-cysteine from sulfate%3B a flavoprotein with flavin reductase activity;Dbxref=Genbank:YP_002404030.1,GeneID:7145827;gbkey=CDS;product=sulfite reductase subunit alpha;protein_id=YP_002404030.1;transl_table=11
NC_011748.1	RefSeq	gene	3108202	3108567	.	+	.	ID=gene3101;Name=ygcM;Dbxref=GeneID:7145828;gbkey=Gene;gene=ygcM;locus_tag=EC55989_3039
NC_011748.1	RefSeq	CDS	3108202	3108567	.	+	0	ID=cds2884;Name=YP_002404031.1;Parent=gene3101;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 12123838%3B Product type e : enzyme;Dbxref=Genbank:YP_002404031.1,GeneID:7145828;gbkey=CDS;product=6-pyruvoyl tetrahydrobiopterin synthase;protein_id=YP_002404031.1;transl_table=11
NC_011748.1	RefSeq	gene	3108645	3109916	.	+	.	ID=gene3102;Name=ygcN;Dbxref=GeneID:7148812;gbkey=Gene;gene=ygcN;locus_tag=EC55989_3040
NC_011748.1	RefSeq	CDS	3108645	3109916	.	+	0	ID=cds2885;Name=YP_002404032.1;Parent=gene3102;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002404032.1,GeneID:7148812;gbkey=CDS;product=oxidoreductase with FAD%2FNAD%28P%29-binding domain;protein_id=YP_002404032.1;transl_table=11
NC_011748.1	RefSeq	gene	3109907	3110167	.	+	.	ID=gene3103;Name=ygcO;Dbxref=GeneID:7148813;gbkey=Gene;gene=ygcO;locus_tag=EC55989_3041
NC_011748.1	RefSeq	CDS	3109907	3110167	.	+	0	ID=cds2886;Name=YP_002404033.1;Parent=gene3103;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pc :  carrier;Dbxref=Genbank:YP_002404033.1,GeneID:7148813;gbkey=CDS;product=4Fe-4S binding protein;protein_id=YP_002404033.1;transl_table=11
NC_011748.1	RefSeq	gene	3110184	3110759	.	+	.	ID=gene3104;Name=ygcP;Dbxref=GeneID:7148814;gbkey=Gene;gene=ygcP;locus_tag=EC55989_3042
NC_011748.1	RefSeq	CDS	3110184	3110759	.	+	0	ID=cds2887;Name=YP_002404034.1;Parent=gene3104;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pr :  regulator;Dbxref=Genbank:YP_002404034.1,GeneID:7148814;gbkey=CDS;product=anti-terminator regulatory protein;protein_id=YP_002404034.1;transl_table=11
NC_011748.1	RefSeq	gene	3110907	3111767	.	-	.	ID=gene3105;Name=ygcQ;Dbxref=GeneID:7148815;gbkey=Gene;gene=ygcQ;locus_tag=EC55989_3043
NC_011748.1	RefSeq	CDS	3110907	3111767	.	-	0	ID=cds2888;Name=YP_002404035.1;Parent=gene3105;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pc :  carrier;Dbxref=Genbank:YP_002404035.1,GeneID:7148815;gbkey=CDS;product=flavoprotein;protein_id=YP_002404035.1;transl_table=11
NC_011748.1	RefSeq	gene	3111764	3112543	.	-	.	ID=gene3106;Name=ygcR;Dbxref=GeneID:7148816;gbkey=Gene;gene=ygcR;locus_tag=EC55989_3044
NC_011748.1	RefSeq	CDS	3111764	3112543	.	-	0	ID=cds2889;Name=YP_002404036.1;Parent=gene3106;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pc :  carrier;Dbxref=Genbank:YP_002404036.1,GeneID:7148816;gbkey=CDS;product=flavoprotein;protein_id=YP_002404036.1;transl_table=11
NC_011748.1	RefSeq	gene	3112521	3113858	.	-	.	ID=gene3107;Name=ygcS;Dbxref=GeneID:7148817;gbkey=Gene;gene=ygcS;locus_tag=EC55989_3045
NC_011748.1	RefSeq	CDS	3112521	3113858	.	-	0	ID=cds2890;Name=YP_002404037.1;Parent=gene3107;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002404037.1,GeneID:7148817;gbkey=CDS;product=transporter;protein_id=YP_002404037.1;transl_table=11
NC_011748.1	RefSeq	gene	3113952	3115406	.	-	.	ID=gene3108;Name=ygcU;Dbxref=GeneID:7148818;gbkey=Gene;gene=ygcU;locus_tag=EC55989_3046
NC_011748.1	RefSeq	CDS	3113952	3115406	.	-	0	ID=cds2891;Name=YP_002404038.1;Parent=gene3108;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002404038.1,GeneID:7148818;gbkey=CDS;product=FAD containing dehydrogenase;protein_id=YP_002404038.1;transl_table=11
NC_011748.1	RefSeq	gene	3115476	3116261	.	-	.	ID=gene3109;Name=ygcW;Dbxref=GeneID:7148819;gbkey=Gene;gene=ygcW;locus_tag=EC55989_3047
NC_011748.1	RefSeq	CDS	3115476	3116261	.	-	0	ID=cds2892;Name=YP_002404039.1;Parent=gene3109;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002404039.1,GeneID:7148819;gbkey=CDS;product=deoxygluconate dehydrogenase;protein_id=YP_002404039.1;transl_table=11
NC_011748.1	RefSeq	gene	3116580	3117857	.	+	.	ID=gene3110;Name=yqcE;Dbxref=GeneID:7148820;gbkey=Gene;gene=yqcE;locus_tag=EC55989_3048
NC_011748.1	RefSeq	CDS	3116580	3117857	.	+	0	ID=cds2893;Name=YP_002404040.1;Parent=gene3110;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002404040.1,GeneID:7148820;gbkey=CDS;product=transporter;protein_id=YP_002404040.1;transl_table=11
NC_011748.1	RefSeq	gene	3117884	3119362	.	+	.	ID=gene3111;Name=ygcE;Dbxref=GeneID:7149395;gbkey=Gene;gene=ygcE;locus_tag=EC55989_3049
NC_011748.1	RefSeq	CDS	3117884	3119362	.	+	0	ID=cds2894;Name=YP_002404041.1;Parent=gene3111;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002404041.1,GeneID:7149395;gbkey=CDS;product=kinase;protein_id=YP_002404041.1;transl_table=11
NC_011748.1	RefSeq	gene	3121284	3121955	.	-	.	ID=gene3112;Name=ygcF;Dbxref=GeneID:7148809;gbkey=Gene;gene=ygcF;locus_tag=EC55989_3051
NC_011748.1	RefSeq	CDS	3121284	3121955	.	-	0	ID=cds2895;Name=YP_002404042.1;Parent=gene3112;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404042.1,GeneID:7148809;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404042.1;transl_table=11
NC_011748.1	RefSeq	gene	3122416	3123120	.	+	.	ID=gene3113;Name=ygcG;Dbxref=GeneID:7148810;gbkey=Gene;gene=ygcG;locus_tag=EC55989_3052
NC_011748.1	RefSeq	CDS	3122416	3123120	.	+	0	ID=cds2896;Name=YP_002404043.1;Parent=gene3113;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404043.1,GeneID:7148810;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404043.1;transl_table=11
NC_011748.1	RefSeq	gene	3122930	3123196	.	+	.	ID=gene3114;Name=EC55989_3053;Dbxref=GeneID:7148811;gbkey=Gene;locus_tag=EC55989_3053
NC_011748.1	RefSeq	CDS	3122930	3123196	.	+	0	ID=cds2897;Name=YP_002404044.1;Parent=gene3114;Note=Evidence 6 : Doubtful CDS;Dbxref=Genbank:YP_002404044.1,GeneID:7148811;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404044.1;transl_table=11
NC_011748.1	RefSeq	gene	3123180	3124478	.	-	.	ID=gene3115;Name=eno;Dbxref=GeneID:7144862;gbkey=Gene;gene=eno;locus_tag=EC55989_3054
NC_011748.1	RefSeq	CDS	3123180	3124478	.	-	0	ID=cds2898;Name=YP_002404045.1;Parent=gene3115;Note=enolase%3B catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis;Dbxref=Genbank:YP_002404045.1,GeneID:7144862;gbkey=CDS;product=phosphopyruvate hydratase;protein_id=YP_002404045.1;transl_table=11
NC_011748.1	RefSeq	gene	3124566	3126203	.	-	.	ID=gene3116;Name=pyrG;Dbxref=GeneID:7145998;gbkey=Gene;gene=pyrG;locus_tag=EC55989_3055
NC_011748.1	RefSeq	CDS	3124566	3126203	.	-	0	ID=cds2899;Name=YP_002404046.1;Parent=gene3116;Note=CTP synthase%3B cytidine triphosphate synthetase%3B catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen%3B in Escherichia coli this enzyme forms a homotetramer;Dbxref=Genbank:YP_002404046.1,GeneID:7145998;gbkey=CDS;product=CTP synthetase;protein_id=YP_002404046.1;transl_table=11
NC_011748.1	RefSeq	gene	3126431	3127222	.	-	.	ID=gene3117;Name=mazG;Dbxref=GeneID:7147322;gbkey=Gene;gene=mazG;locus_tag=EC55989_3056
NC_011748.1	RefSeq	CDS	3126431	3127222	.	-	0	ID=cds2900;Name=YP_002404047.1;Parent=gene3117;Note=functions in degradation of stringent response intracellular messenger ppGpp%3B in Escherichia coli this gene is co-transcribed with the toxin%2Fantitoxin genes mazEF%3B activity of MazG is inhibited by MazEF in vitro%3B ppGpp inhibits mazEF expression%3B MazG thus works in limiting the toxic activity of the MazF toxin induced during starvation%3B MazG also interacts with the GTPase protein Era;Dbxref=Genbank:YP_002404047.1,GeneID:7147322;gbkey=CDS;product=nucleoside triphosphate pyrophosphohydrolase;protein_id=YP_002404047.1;transl_table=11
NC_011748.1	RefSeq	gene	3127293	3127628	.	-	.	ID=gene3118;Name=chpA;Dbxref=GeneID:7146791;gbkey=Gene;gene=chpA;locus_tag=EC55989_3057
NC_011748.1	RefSeq	CDS	3127293	3127628	.	-	0	ID=cds2901;Name=YP_002404048.1;Parent=gene3118;Note=MazF%3B endoribonuclease%3B toxin of the ChpA-ChpR toxin-antitoxin system;Dbxref=Genbank:YP_002404048.1,GeneID:7146791;gbkey=CDS;product=toxin ChpA;protein_id=YP_002404048.1;transl_table=11
NC_011748.1	RefSeq	gene	3127628	3127876	.	-	.	ID=gene3119;Name=chpR;Dbxref=GeneID:7145703;gbkey=Gene;gene=chpR;locus_tag=EC55989_3058
NC_011748.1	RefSeq	CDS	3127628	3127876	.	-	0	ID=cds2902;Name=YP_002404049.1;Parent=gene3119;Note=part of the MazF-MazE toxin-antitoxin system%3B conteracts MazF;Dbxref=Genbank:YP_002404049.1,GeneID:7145703;gbkey=CDS;product=antitoxin MazE;protein_id=YP_002404049.1;transl_table=11
NC_011748.1	RefSeq	gene	3127954	3130188	.	-	.	ID=gene3120;Name=relA;Dbxref=GeneID:7145705;gbkey=Gene;gene=relA;locus_tag=EC55989_3059
NC_011748.1	RefSeq	CDS	3127954	3130188	.	-	0	ID=cds2903;Name=YP_002404050.1;Parent=gene3120;Note=%28p%29ppGpp synthetase%3B catalyzes the formation of pppGpp and ppGpp from ATP and GTP or GDP;Dbxref=Genbank:YP_002404050.1,GeneID:7145705;gbkey=CDS;product=GDP%2FGTP pyrophosphokinase;protein_id=YP_002404050.1;transl_table=11
NC_011748.1	RefSeq	gene	3130236	3131537	.	-	.	ID=gene3121;Name=rumA;Dbxref=GeneID:7147369;gbkey=Gene;gene=rumA;locus_tag=EC55989_3060
NC_011748.1	RefSeq	CDS	3130236	3131537	.	-	0	ID=cds2904;Name=YP_002404051.1;Parent=gene3121;Note=in Escherichia coli this enzyme catalyzes the SAM-dependent methylation of U1939 in the 23S ribomal RNA%3B binds an iron-sulfur cluster %5B4Fe-4S%5D;Dbxref=Genbank:YP_002404051.1,GeneID:7147369;gbkey=CDS;product=23S rRNA 5-methyluridine methyltransferase;protein_id=YP_002404051.1;transl_table=11
NC_011748.1	RefSeq	gene	3131594	3131923	.	+	.	ID=gene3122;Name=barA;Dbxref=GeneID:7147557;gbkey=Gene;gene=barA;locus_tag=EC55989_3061;pseudo=true
NC_011748.1	RefSeq	region	3131594	3131923	.	+	.	ID=id252;Note=fragment of hybrid sensory histidine kinase%2C in two-component regulatory system with UvrY %28part 1%29%3BEvidence 7 : Gene remnant%3B Product type r : regulator;Dbxref=GeneID:7147557;gbkey=misc_feature
NC_011748.1	RefSeq	gene	3131952	3132227	.	+	.	ID=gene3123;Name=EC55989_3062;Dbxref=GeneID:7145595;gbkey=Gene;locus_tag=EC55989_3062
NC_011748.1	RefSeq	CDS	3131952	3132227	.	+	0	ID=cds2905;Name=YP_002404052.1;Parent=gene3123;Note=Evidence 2b : Function of strongly homologous gene%3B PubMedId : 375010%2C 1849492%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002404052.1,GeneID:7145595;gbkey=CDS;product=Insertion element IS1 protein insA;protein_id=YP_002404052.1;transl_table=11
NC_011748.1	RefSeq	gene	3132146	3132649	.	+	.	ID=gene3124;Name=EC55989_3063;Dbxref=GeneID:7144863;gbkey=Gene;locus_tag=EC55989_3063
NC_011748.1	RefSeq	CDS	3132146	3132649	.	+	0	ID=cds2906;Name=YP_002404053.1;Parent=gene3124;Note=Evidence 2b : Function of strongly homologous gene%3B PubMedId : 273224%2C 375010%2C 1849492%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002404053.1,GeneID:7144863;gbkey=CDS;product=Insertion element IS1 1%2F5%2F6 protein insB;protein_id=YP_002404053.1;transl_table=11
NC_011748.1	RefSeq	gene	3132691	3135126	.	+	.	ID=gene3125;Name=barA;Dbxref=GeneID:7144864;gbkey=Gene;gene=barA;locus_tag=EC55989_3064;pseudo=true
NC_011748.1	RefSeq	region	3132691	3135126	.	+	.	ID=id253;Note=fragment of hybrid sensory histidine kinase%2C in two-component regulatory system with UvrY %28part 2%29%3BEvidence 7 : Gene remnant%3B Product type r : regulator;Dbxref=GeneID:7144864;gbkey=misc_feature
NC_011748.1	RefSeq	gene	3135358	3136698	.	-	.	ID=gene3126;Name=gudD;Dbxref=GeneID:7145596;gbkey=Gene;gene=gudD;locus_tag=EC55989_3065
NC_011748.1	RefSeq	CDS	3135358	3136698	.	-	0	ID=cds2907;Name=YP_002404054.1;Parent=gene3126;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 20233700%2C 9772162%2C 10762278%2C 13971911%3B Product type e : enzyme;Dbxref=Genbank:YP_002404054.1,GeneID:7145596;gbkey=CDS;product=%28D%29-glucarate dehydratase 1;protein_id=YP_002404054.1;transl_table=11
NC_011748.1	RefSeq	gene	3136719	3137705	.	-	.	ID=gene3127;Name=gudX;Dbxref=GeneID:7146382;gbkey=Gene;gene=gudX;locus_tag=EC55989_3066;pseudo=true
NC_011748.1	RefSeq	region	3136719	3137705	.	-	.	ID=id254;Note=fragment of glucarate dehydratase %28part 2%29%3BEvidence 7 : Gene remnant%3B Product type e : enzyme;Dbxref=GeneID:7146382;gbkey=misc_feature
NC_011748.1	RefSeq	gene	3137712	3138059	.	-	.	ID=gene3128;Name=gudX;Dbxref=GeneID:7146384;gbkey=Gene;gene=gudX;locus_tag=EC55989_3067;pseudo=true
NC_011748.1	RefSeq	region	3137712	3138059	.	-	.	ID=id255;Note=fragment of glucarate dehydratase %28part 1%29%3BEvidence 7 : Gene remnant%3B Product type e : enzyme;Dbxref=GeneID:7146384;gbkey=misc_feature
NC_011748.1	RefSeq	gene	3138061	3139413	.	-	.	ID=gene3129;Name=gudP;Dbxref=GeneID:7146385;gbkey=Gene;gene=gudP;locus_tag=EC55989_3068
NC_011748.1	RefSeq	CDS	3138061	3139413	.	-	0	ID=cds2908;Name=YP_002404055.1;Parent=gene3129;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 10762278%3B Product type pt :  transporter;Dbxref=Genbank:YP_002404055.1,GeneID:7146385;gbkey=CDS;product=D-glucarate transporter;protein_id=YP_002404055.1;transl_table=11
NC_011748.1	RefSeq	gene	3139848	3140297	.	-	.	ID=gene3130;Name=yqcA;Dbxref=GeneID:7146383;gbkey=Gene;gene=yqcA;locus_tag=EC55989_3069
NC_011748.1	RefSeq	CDS	3139848	3140297	.	-	0	ID=cds2909;Name=YP_002404056.1;Parent=gene3130;Note=An electron-transfer protein%3B flavodoxin binds one FMN molecule%2C which serves as a redox-active prosthetic group;Dbxref=Genbank:YP_002404056.1,GeneID:7146383;gbkey=CDS;product=flavodoxin;protein_id=YP_002404056.1;transl_table=11
NC_011748.1	RefSeq	gene	3140315	3141097	.	-	.	ID=gene3131;Name=truC;Dbxref=GeneID:7149393;gbkey=Gene;gene=truC;locus_tag=EC55989_3070
NC_011748.1	RefSeq	CDS	3140315	3141097	.	-	0	ID=cds2910;Name=YP_002404057.1;Parent=gene3131;Note=catalyzes formation of pseudouridine at position 65 in tRNA-Ile1 and tRNA-Asp;Dbxref=Genbank:YP_002404057.1,GeneID:7149393;gbkey=CDS;product=tRNA pseudouridine synthase C;protein_id=YP_002404057.1;transl_table=11
NC_011748.1	RefSeq	gene	3141097	3141426	.	-	.	ID=gene3132;Name=yqcC;Dbxref=GeneID:7147860;gbkey=Gene;gene=yqcC;locus_tag=EC55989_3071
NC_011748.1	RefSeq	CDS	3141097	3141426	.	-	0	ID=cds2911;Name=YP_002404058.1;Parent=gene3132;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404058.1,GeneID:7147860;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404058.1;transl_table=11
NC_011748.1	RefSeq	gene	3141475	3141830	.	-	.	ID=gene3133;Name=csrB;Dbxref=GeneID:7149394;gbkey=Gene;gene=csrB;locus_tag=EC55989_misc_RNA_65
NC_011748.1	RefSeq	transcript	3141475	3141830	.	-	.	ID=rna127;Parent=gene3133;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 9211896%3B Product type n : RNA;Dbxref=GeneID:7149394;gbkey=misc_RNA;product=CsrB
NC_011748.1	RefSeq	exon	3141475	3141830	.	-	.	ID=id256;Parent=rna127;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 9211896%3B Product type n : RNA;Dbxref=GeneID:7149394;gbkey=misc_RNA;product=CsrB
NC_011748.1	RefSeq	gene	3142048	3142593	.	-	.	ID=gene3134;Name=syd;Dbxref=GeneID:7145784;gbkey=Gene;gene=syd;locus_tag=EC55989_3072
NC_011748.1	RefSeq	CDS	3142048	3142593	.	-	0	ID=cds2912;Name=YP_002404059.1;Parent=gene3134;Note=SecY regulator that either chelates excess SecY or negatively regulates the SecYE translocase function;Dbxref=Genbank:YP_002404059.1,GeneID:7145784;gbkey=CDS;product=SecY interacting protein Syd;protein_id=YP_002404059.1;transl_table=11
NC_011748.1	RefSeq	gene	3142661	3143509	.	+	.	ID=gene3135;Name=queF;Dbxref=GeneID:7147742;gbkey=Gene;gene=queF;locus_tag=EC55989_3073
NC_011748.1	RefSeq	CDS	3142661	3143509	.	+	0	ID=cds2913;Name=YP_002404060.1;Parent=gene3135;Note=catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine %28preQ0%29 to 7-aminomethyl-7-deazaguanine %28preQ1%29 in queuosine biosynthesis;Dbxref=Genbank:YP_002404060.1,GeneID:7147742;gbkey=CDS;product=7-cyano-7-deazaguanine reductase;protein_id=YP_002404060.1;transl_table=11
NC_011748.1	RefSeq	gene	3143621	3144985	.	+	.	ID=gene3136;Name=ygdH;Dbxref=GeneID:7147333;gbkey=Gene;gene=ygdH;locus_tag=EC55989_3074
NC_011748.1	RefSeq	CDS	3143621	3144985	.	+	0	ID=cds2914;Name=YP_002404061.1;Parent=gene3136;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404061.1,GeneID:7147333;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404061.1;transl_table=11
NC_011748.1	RefSeq	gene	3145542	3146831	.	+	.	ID=gene3137;Name=sdaC;Dbxref=GeneID:7148824;gbkey=Gene;gene=sdaC;locus_tag=EC55989_3075
NC_011748.1	RefSeq	CDS	3145542	3146831	.	+	0	ID=cds2915;Name=YP_002404062.1;Parent=gene3137;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 8752353%2C 8026499%3B Product type pt :  transporter;Dbxref=Genbank:YP_002404062.1,GeneID:7148824;gbkey=CDS;product=serine transporter;protein_id=YP_002404062.1;transl_table=11
NC_011748.1	RefSeq	gene	3146889	3148256	.	+	.	ID=gene3138;Name=sdaB;Dbxref=GeneID:7147614;gbkey=Gene;gene=sdaB;locus_tag=EC55989_3076
NC_011748.1	RefSeq	CDS	3146889	3148256	.	+	0	ID=cds2916;Name=YP_002404063.1;Parent=gene3138;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 91193203%2C 93215657%2C 8385012%3B Product type e : enzyme;Dbxref=Genbank:YP_002404063.1,GeneID:7147614;gbkey=CDS;product=L-serine deaminase II;protein_id=YP_002404063.1;transl_table=11
NC_011748.1	RefSeq	gene	3148278	3149123	.	+	.	ID=gene3139;Name=xni;Dbxref=GeneID:7147613;gbkey=Gene;gene=xni;locus_tag=EC55989_3077
NC_011748.1	RefSeq	CDS	3148278	3149123	.	+	0	ID=cds2917;Name=YP_002404064.1;Parent=gene3139;Note=has 3%27-5%27 exonuclease activity that preferentially acts on ssDNA%3B also 3%27-phosphodiesterase activity at sites with 3%27 incised apurinic%2Fapyrimidinic sites%3B can remove 3%27 phosphoglycolate groups;Dbxref=Genbank:YP_002404064.1,GeneID:7147613;gbkey=CDS;product=exonuclease IX;protein_id=YP_002404064.1;transl_table=11
NC_011748.1	RefSeq	gene	3149178	3150329	.	-	.	ID=gene3140;Name=fucO;Dbxref=GeneID:7146042;gbkey=Gene;gene=fucO;locus_tag=EC55989_3078
NC_011748.1	RefSeq	CDS	3149178	3150329	.	-	0	ID=cds2918;Name=YP_002404065.1;Parent=gene3140;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 88142551%2C 89291720%2C 2553671%2C 2661535%2C 2664711%2C 8385012%3B Product type e : enzyme;Dbxref=Genbank:YP_002404065.1,GeneID:7146042;gbkey=CDS;product=L-1%2C2-propanediol oxidoreductase;protein_id=YP_002404065.1;transl_table=11
NC_011748.1	RefSeq	gene	3150354	3151001	.	-	.	ID=gene3141;Name=fucA;Dbxref=GeneID:7146226;gbkey=Gene;gene=fucA;locus_tag=EC55989_3079
NC_011748.1	RefSeq	CDS	3150354	3151001	.	-	0	ID=cds2919;Name=YP_002404066.1;Parent=gene3141;Note=catalyzes the formation of glycerone phosphate and %28S%29-lactaldehyde from L-fuculose 1-phosphate;Dbxref=Genbank:YP_002404066.1,GeneID:7146226;gbkey=CDS;product=L-fuculose phosphate aldolase;protein_id=YP_002404066.1;transl_table=11
NC_011748.1	RefSeq	gene	3151548	3152864	.	+	.	ID=gene3142;Name=fucP;Dbxref=GeneID:7146223;gbkey=Gene;gene=fucP;locus_tag=EC55989_3080
NC_011748.1	RefSeq	CDS	3151548	3152864	.	+	0	ID=cds2920;Name=YP_002404067.1;Parent=gene3142;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 88142551%2C 90036697%2C 2553671%2C 2664711%2C 7783647%3B Product type t : transporter;Dbxref=Genbank:YP_002404067.1,GeneID:7146223;gbkey=CDS;product=L-fucose transporter;protein_id=YP_002404067.1;transl_table=11
NC_011748.1	RefSeq	gene	3152897	3154672	.	+	.	ID=gene3143;Name=fucI;Dbxref=GeneID:7146227;gbkey=Gene;gene=fucI;locus_tag=EC55989_3081
NC_011748.1	RefSeq	CDS	3152897	3154672	.	+	0	ID=cds2921;Name=YP_002404068.1;Parent=gene3143;Note=catalyzes the conversion of the aldose L-fucose into the corresponding ketose L-fuculose;Dbxref=Genbank:YP_002404068.1,GeneID:7146227;gbkey=CDS;product=L-fucose isomerase;protein_id=YP_002404068.1;transl_table=11
NC_011748.1	RefSeq	gene	3154751	3156199	.	+	.	ID=gene3144;Name=fucK;Dbxref=GeneID:7146224;gbkey=Gene;gene=fucK;locus_tag=EC55989_3082
NC_011748.1	RefSeq	CDS	3154751	3156199	.	+	0	ID=cds2922;Name=YP_002404069.1;Parent=gene3144;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 88142551%2C 90036697%2C 2664711%2C 13905785%3B Product type e : enzyme;Dbxref=Genbank:YP_002404069.1,GeneID:7146224;gbkey=CDS;product=L-fuculokinase;protein_id=YP_002404069.1;transl_table=11
NC_011748.1	RefSeq	gene	3156201	3156623	.	+	.	ID=gene3145;Name=fucU;Dbxref=GeneID:7146225;gbkey=Gene;gene=fucU;locus_tag=EC55989_3083
NC_011748.1	RefSeq	CDS	3156201	3156623	.	+	0	ID=cds2923;Name=YP_002404070.1;Parent=gene3145;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 15060078%2C 12738765%2C 80049526%2C 2664711%3B Product type e : enzyme;Dbxref=Genbank:YP_002404070.1,GeneID:7146225;gbkey=CDS;product=L-fucose mutarotase;protein_id=YP_002404070.1;transl_table=11
NC_011748.1	RefSeq	gene	3156681	3157412	.	+	.	ID=gene3146;Name=fucR;Dbxref=GeneID:7146229;gbkey=Gene;gene=fucR;locus_tag=EC55989_3084
NC_011748.1	RefSeq	CDS	3156681	3157412	.	+	0	ID=cds2924;Name=YP_002404071.1;Parent=gene3146;Note=regulates expression of genes involved in L-fucose utilization;Dbxref=Genbank:YP_002404071.1,GeneID:7146229;gbkey=CDS;product=DNA-binding transcriptional activator FucR;protein_id=YP_002404071.1;transl_table=11
NC_011748.1	RefSeq	gene	3157456	3158556	.	-	.	ID=gene3147;Name=ygdE;Dbxref=GeneID:7146228;gbkey=Gene;gene=ygdE;locus_tag=EC55989_3085
NC_011748.1	RefSeq	CDS	3157456	3158556	.	-	0	ID=cds2925;Name=YP_002404072.1;Parent=gene3147;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 21188420%2C 7704273%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002404072.1,GeneID:7146228;gbkey=CDS;product=RNA 2%27-O-ribose methyltransferase;protein_id=YP_002404072.1;transl_table=11
NC_011748.1	RefSeq	gene	3158549	3158944	.	-	.	ID=gene3148;Name=ygdD;Dbxref=GeneID:7148823;gbkey=Gene;gene=ygdD;locus_tag=EC55989_3086
NC_011748.1	RefSeq	CDS	3158549	3158944	.	-	0	ID=cds2926;Name=YP_002404073.1;Parent=gene3148;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 7704273%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002404073.1,GeneID:7148823;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404073.1;transl_table=11
NC_011748.1	RefSeq	gene	3158963	3159880	.	-	.	ID=gene3149;Name=gcvA;Dbxref=GeneID:7148822;gbkey=Gene;gene=gcvA;locus_tag=EC55989_3087
NC_011748.1	RefSeq	CDS	3158963	3159880	.	-	0	ID=cds2927;Name=YP_002404074.1;Parent=gene3149;Note=Glycine cleavage system transcriptional activator%3B activates the gcvTHP operon in the presence of glycine and represses the operon in its absence;Dbxref=Genbank:YP_002404074.1,GeneID:7148822;gbkey=CDS;product=DNA-binding transcriptional activator GcvA;protein_id=YP_002404074.1;transl_table=11
NC_011748.1	RefSeq	gene	3160009	3160213	.	+	.	ID=gene3150;Name=gcvB;Dbxref=GeneID:7146274;gbkey=Gene;gene=gcvB;locus_tag=EC55989_misc_RNA_66
NC_011748.1	RefSeq	transcript	3160009	3160213	.	+	.	ID=rna128;Parent=gene3150;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 10972807%3B Product type n : RNA;Dbxref=GeneID:7146274;gbkey=misc_RNA;product=GcvB
NC_011748.1	RefSeq	exon	3160009	3160213	.	+	.	ID=id257;Parent=rna128;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 10972807%3B Product type n : RNA;Dbxref=GeneID:7146274;gbkey=misc_RNA;product=GcvB
NC_011748.1	RefSeq	gene	3160231	3160458	.	-	.	ID=gene3151;Name=ygdI;Dbxref=GeneID:7146275;gbkey=Gene;gene=ygdI;locus_tag=EC55989_3088
NC_011748.1	RefSeq	CDS	3160231	3160458	.	-	0	ID=cds2928;Name=YP_002404075.1;Parent=gene3151;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404075.1,GeneID:7146275;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404075.1;transl_table=11
NC_011748.1	RefSeq	gene	3160650	3161855	.	+	.	ID=gene3152;Name=csdA;Dbxref=GeneID:7148825;gbkey=Gene;gene=csdA;locus_tag=EC55989_3089
NC_011748.1	RefSeq	CDS	3160650	3161855	.	+	0	ID=cds2929;Name=YP_002404076.1;Parent=gene3152;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 15148362%2C 9278392%2C 10739946%2C 10829016%3B Product type e : enzyme;Dbxref=Genbank:YP_002404076.1,GeneID:7148825;gbkey=CDS;product=cysteine sulfinate desulfinase;protein_id=YP_002404076.1;transl_table=11
NC_011748.1	RefSeq	gene	3161855	3162298	.	+	.	ID=gene3153;Name=ygdK;Dbxref=GeneID:7145767;gbkey=Gene;gene=ygdK;locus_tag=EC55989_3090
NC_011748.1	RefSeq	CDS	3161855	3162298	.	+	0	ID=cds2930;Name=YP_002404077.1;Parent=gene3153;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pc :  carrier;Dbxref=Genbank:YP_002404077.1,GeneID:7145767;gbkey=CDS;product=Fe-S metabolism protein %28sufE-like%29;protein_id=YP_002404077.1;transl_table=11
NC_011748.1	RefSeq	gene	3162349	3163155	.	-	.	ID=gene3154;Name=ygdL;Dbxref=GeneID:7148826;gbkey=Gene;gene=ygdL;locus_tag=EC55989_3091
NC_011748.1	RefSeq	CDS	3162349	3163155	.	-	0	ID=cds2931;Name=YP_002404078.1;Parent=gene3154;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404078.1,GeneID:7148826;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404078.1;transl_table=11
NC_011748.1	RefSeq	gene	3163232	3164329	.	-	.	ID=gene3155;Name=mltA;Dbxref=GeneID:7148827;gbkey=Gene;gene=mltA;locus_tag=EC55989_3092
NC_011748.1	RefSeq	CDS	3163232	3164329	.	-	0	ID=cds2932;Name=YP_002404079.1;Parent=gene3155;Note=membrane-bound%2C lytic%3B catalyzes the cleavage of the beta-1%2C4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues;Dbxref=Genbank:YP_002404079.1,GeneID:7148827;gbkey=CDS;product=murein transglycosylase A;protein_id=YP_002404079.1;transl_table=11
NC_011748.1	RefSeq	gene	3164538	3164614	.	+	.	ID=gene3156;Name=EC55989_tRNA31;Dbxref=GeneID:7146863;gbkey=Gene;locus_tag=EC55989_tRNA31
NC_011748.1	RefSeq	tRNA	3164538	3164614	.	+	.	ID=rna129;Dbxref=GeneID:7146863;gbkey=tRNA;product=tRNA-Met
NC_011748.1	RefSeq	exon	3164538	3164614	.	+	.	ID=id258;Parent=rna129;Dbxref=GeneID:7146863;gbkey=tRNA;product=tRNA-Met
NC_011748.1	RefSeq	gene	3164648	3164724	.	+	.	ID=gene3157;Name=EC55989_tRNA32;Dbxref=GeneID:7145341;gbkey=Gene;locus_tag=EC55989_tRNA32
NC_011748.1	RefSeq	tRNA	3164648	3164724	.	+	.	ID=rna130;Dbxref=GeneID:7145341;gbkey=tRNA;product=tRNA-Met
NC_011748.1	RefSeq	exon	3164648	3164724	.	+	.	ID=id259;Parent=rna130;Dbxref=GeneID:7145341;gbkey=tRNA;product=tRNA-Met
NC_011748.1	RefSeq	gene	3164757	3164833	.	+	.	ID=gene3158;Name=EC55989_tRNA33;Dbxref=GeneID:7145342;gbkey=Gene;locus_tag=EC55989_tRNA33
NC_011748.1	RefSeq	tRNA	3164757	3164833	.	+	.	ID=rna131;Dbxref=GeneID:7145342;gbkey=tRNA;product=tRNA-Met
NC_011748.1	RefSeq	exon	3164757	3164833	.	+	.	ID=id260;Parent=rna131;Dbxref=GeneID:7145342;gbkey=tRNA;product=tRNA-Met
NC_011748.1	RefSeq	gene	3164907	3166160	.	-	.	ID=gene3159;Name=amiC;Dbxref=GeneID:7145343;gbkey=Gene;gene=amiC;locus_tag=EC55989_3093
NC_011748.1	RefSeq	CDS	3164907	3166160	.	-	0	ID=cds2933;Name=YP_002404080.1;Parent=gene3159;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 12787347%2C 21348478%3B Product type e : enzyme;Dbxref=Genbank:YP_002404080.1,GeneID:7145343;gbkey=CDS;product=N-acetylmuramoyl-L-alanine amidase;protein_id=YP_002404080.1;transl_table=11
NC_011748.1	RefSeq	gene	3166392	3167723	.	+	.	ID=gene3160;Name=argA;Dbxref=GeneID:7145492;gbkey=Gene;gene=argA;locus_tag=EC55989_3094
NC_011748.1	RefSeq	CDS	3166392	3167723	.	+	0	ID=cds2934;Name=YP_002404081.1;Parent=gene3160;Note=catalyzes the formation of N-acetyl-L-glutamate from L-glutamate and acetyl-CoA in arginine biosynthesis;Dbxref=Genbank:YP_002404081.1,GeneID:7145492;gbkey=CDS;product=N-acetylglutamate synthase;protein_id=YP_002404081.1;transl_table=11
NC_011748.1	RefSeq	gene	3167785	3169611	.	-	.	ID=gene3161;Name=recD;Dbxref=GeneID:7145524;gbkey=Gene;gene=recD;locus_tag=EC55989_3095
NC_011748.1	RefSeq	CDS	3167785	3169611	.	-	0	ID=cds2935;Name=YP_002404082.1;Parent=gene3161;Note=helicase%2Fnuclease%3B with RecBC catalyzes the exonucleolytic cleavage of DNA%3B RecD has 5%27 to 3%27 helicase activity;Dbxref=Genbank:YP_002404082.1,GeneID:7145524;gbkey=CDS;product=exonuclease V subunit alpha;protein_id=YP_002404082.1;transl_table=11
NC_011748.1	RefSeq	gene	3169611	3173153	.	-	.	ID=gene3162;Name=recB;Dbxref=GeneID:7147360;gbkey=Gene;gene=recB;locus_tag=EC55989_3096
NC_011748.1	RefSeq	CDS	3169611	3173153	.	-	0	ID=cds2936;Name=YP_002404083.1;Parent=gene3162;Note=helicase%2Fnuclease%3B with RecCD catalyzes the exonucleolytic cleavage of DNA%3B RecD has 5%27 to 3%27 helicase activity;Dbxref=Genbank:YP_002404083.1,GeneID:7147360;gbkey=CDS;product=exonuclease V subunit beta;protein_id=YP_002404083.1;transl_table=11
NC_011748.1	RefSeq	gene	3173146	3176034	.	-	.	ID=gene3163;Name=ptr;Dbxref=GeneID:7147358;gbkey=Gene;gene=ptr;locus_tag=EC55989_3097
NC_011748.1	RefSeq	CDS	3173146	3176034	.	-	0	ID=cds2937;Name=YP_002404084.1;Parent=gene3163;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 91193232%2C 1570301%2C 3308636%2C 3534791%2C 3537960%2C 8099278%3B Product type e : enzyme;Dbxref=Genbank:YP_002404084.1,GeneID:7147358;gbkey=CDS;product=protease III;protein_id=YP_002404084.1;transl_table=11
NC_011748.1	RefSeq	gene	3176210	3179578	.	-	.	ID=gene3164;Name=recC;Dbxref=GeneID:7147283;gbkey=Gene;gene=recC;locus_tag=EC55989_3098
NC_011748.1	RefSeq	CDS	3176210	3179578	.	-	0	ID=cds2938;Name=YP_002404085.1;Parent=gene3164;Note=catalyzes ATP-dependent exonucleolytic cleavage in either 5%27- to 3%27- or 3%27- to 5%27-direction to yield 5%27-phosphooligonucleotides%3B component of the RecBCD %28Exo V%29 helicase%2Fnuclease complex that is essential for recombination;Dbxref=Genbank:YP_002404085.1,GeneID:7147283;gbkey=CDS;product=exonuclease V subunit gamma;protein_id=YP_002404085.1;transl_table=11
NC_011748.1	RefSeq	gene	3179591	3179914	.	-	.	ID=gene3165;Name=ppdC;Dbxref=GeneID:7147359;gbkey=Gene;gene=ppdC;locus_tag=EC55989_3099
NC_011748.1	RefSeq	CDS	3179591	3179914	.	-	0	ID=cds2939;Name=YP_002404086.1;Parent=gene3165;Note=Evidence 2b : Function of strongly homologous gene%3B PubMedId : 7934814%3B Product type e : enzyme;Dbxref=Genbank:YP_002404086.1,GeneID:7147359;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404086.1;transl_table=11
NC_011748.1	RefSeq	gene	3179899	3180306	.	-	.	ID=gene3166;Name=ygdB;Dbxref=GeneID:7147224;gbkey=Gene;gene=ygdB;locus_tag=EC55989_3100
NC_011748.1	RefSeq	CDS	3179899	3180306	.	-	0	ID=cds2940;Name=YP_002404087.1;Parent=gene3166;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404087.1,GeneID:7147224;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404087.1;transl_table=11
NC_011748.1	RefSeq	gene	3180303	3180866	.	-	.	ID=gene3167;Name=ppdB;Dbxref=GeneID:7148821;gbkey=Gene;gene=ppdB;locus_tag=EC55989_3101
NC_011748.1	RefSeq	CDS	3180303	3180866	.	-	0	ID=cds2941;Name=YP_002404088.1;Parent=gene3167;Note=Evidence 2b : Function of strongly homologous gene%3B PubMedId : 7934814%3B Product type e : enzyme;Dbxref=Genbank:YP_002404088.1,GeneID:7148821;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404088.1;transl_table=11
NC_011748.1	RefSeq	gene	3180857	3181327	.	-	.	ID=gene3168;Name=ppdA;Dbxref=GeneID:7147223;gbkey=Gene;gene=ppdA;locus_tag=EC55989_3102
NC_011748.1	RefSeq	CDS	3180857	3181327	.	-	0	ID=cds2942;Name=YP_002404089.1;Parent=gene3168;Note=Evidence 2b : Function of strongly homologous gene%3B PubMedId : 7934814%3B Product type e : enzyme;Dbxref=Genbank:YP_002404089.1,GeneID:7147223;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404089.1;transl_table=11
NC_011748.1	RefSeq	gene	3181512	3182306	.	-	.	ID=gene3169;Name=thyA;Dbxref=GeneID:7147222;gbkey=Gene;gene=thyA;locus_tag=EC55989_3103
NC_011748.1	RefSeq	CDS	3181512	3182306	.	-	0	ID=cds2943;Name=YP_002404090.1;Parent=gene3169;Note=ThyA%3B catalyzes formation of dTMP and 7%2C8-dihydrofolate from 5%2C10-methylenetetrahydrofolate and dUMP%3B involved in deoxyribonucleotide biosynthesis%3B there are 2 copies in some Bacilli%2C one of which appears to be phage-derived;Dbxref=Genbank:YP_002404090.1,GeneID:7147222;gbkey=CDS;product=thymidylate synthase;protein_id=YP_002404090.1;transl_table=11
NC_011748.1	RefSeq	gene	3182313	3183188	.	-	.	ID=gene3170;Name=lgt;Dbxref=GeneID:7147799;gbkey=Gene;gene=lgt;locus_tag=EC55989_3104
NC_011748.1	RefSeq	CDS	3182313	3183188	.	-	0	ID=cds2944;Name=YP_002404091.1;Parent=gene3170;Note=transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein;Dbxref=Genbank:YP_002404091.1,GeneID:7147799;gbkey=CDS;product=prolipoprotein diacylglyceryl transferase;protein_id=YP_002404091.1;transl_table=11
NC_011748.1	RefSeq	gene	3183339	3185585	.	-	.	ID=gene3171;Name=ptsP;Dbxref=GeneID:7146698;gbkey=Gene;gene=ptsP;locus_tag=EC55989_3105
NC_011748.1	RefSeq	CDS	3183339	3185585	.	-	0	ID=cds2945;Name=YP_002404092.1;Parent=gene3171;Note=member of a second PTS chain involved in nitrogen metabolism%3B PtsP phosphorylates NPr;Dbxref=Genbank:YP_002404092.1,GeneID:7146698;gbkey=CDS;product=fused phosphoenolpyruvate-protein phosphotransferase PtsP%2FGAF domain;protein_id=YP_002404092.1;transl_table=11
NC_011748.1	RefSeq	gene	3185598	3186128	.	-	.	ID=gene3172;Name=nudH;Dbxref=GeneID:7147291;gbkey=Gene;gene=nudH;locus_tag=EC55989_3106
NC_011748.1	RefSeq	CDS	3185598	3186128	.	-	0	ID=cds2946;Name=YP_002404093.1;Parent=gene3172;Note=hydrolyzes diadenosine polyphosphate;Dbxref=Genbank:YP_002404093.1,GeneID:7147291;gbkey=CDS;product=dinucleoside polyphosphate hydrolase;protein_id=YP_002404093.1;transl_table=11
NC_011748.1	RefSeq	gene	3186813	3187502	.	+	.	ID=gene3173;Name=mutH;Dbxref=GeneID:7147042;gbkey=Gene;gene=mutH;locus_tag=EC55989_3107
NC_011748.1	RefSeq	CDS	3186813	3187502	.	+	0	ID=cds2947;Name=YP_002404094.1;Parent=gene3173;Note=MutH%3B Sequence-specific endonuclease that cleaves unmethylated GATC sequences during DNA repair;Dbxref=Genbank:YP_002404094.1,GeneID:7147042;gbkey=CDS;product=DNA mismatch repair protein;protein_id=YP_002404094.1;transl_table=11
NC_011748.1	RefSeq	gene	3187571	3188284	.	+	.	ID=gene3174;Name=ygdQ;Dbxref=GeneID:7146931;gbkey=Gene;gene=ygdQ;locus_tag=EC55989_3108
NC_011748.1	RefSeq	CDS	3187571	3188284	.	+	0	ID=cds2948;Name=YP_002404095.1;Parent=gene3174;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002404095.1,GeneID:7146931;gbkey=CDS;product=inner membrane protein;protein_id=YP_002404095.1;transl_table=11
NC_011748.1	RefSeq	gene	3188422	3188640	.	+	.	ID=gene3175;Name=ygdR;Dbxref=GeneID:7148828;gbkey=Gene;gene=ygdR;locus_tag=EC55989_3109
NC_011748.1	RefSeq	CDS	3188422	3188640	.	+	0	ID=cds2949;Name=YP_002404096.1;Parent=gene3175;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404096.1,GeneID:7148828;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404096.1;transl_table=11
NC_011748.1	RefSeq	gene	3188748	3189788	.	+	.	ID=gene3176;Name=tas;Dbxref=GeneID:7148829;gbkey=Gene;gene=tas;locus_tag=EC55989_3110
NC_011748.1	RefSeq	CDS	3188748	3189788	.	+	0	ID=cds2950;Name=YP_002404097.1;Parent=gene3176;Note=complements the prephenate dehydrogenase dysfunction of an Escherichia coli tyrosine auxotroph strain%3B member of the aldo%2Fketo reductase 2 family%3B crystal structure of purified Escherichia coli protein shows bound NADPH;Dbxref=Genbank:YP_002404097.1,GeneID:7148829;gbkey=CDS;product=aldo-keto reductase;protein_id=YP_002404097.1;transl_table=11
NC_011748.1	RefSeq	gene	3189820	3191013	.	-	.	ID=gene3177;Name=ygeD;Dbxref=GeneID:7147752;gbkey=Gene;gene=ygeD;locus_tag=EC55989_3111
NC_011748.1	RefSeq	CDS	3189820	3191013	.	-	0	ID=cds2951;Name=YP_002404098.1;Parent=gene3177;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 8300626%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002404098.1,GeneID:7147752;gbkey=CDS;product=lysophospholipid transporter LplT;protein_id=YP_002404098.1;transl_table=11
NC_011748.1	RefSeq	gene	3191006	3193165	.	-	.	ID=gene3178;Name=aas;Dbxref=GeneID:7148831;gbkey=Gene;gene=aas;locus_tag=EC55989_3112
NC_011748.1	RefSeq	CDS	3191006	3193165	.	-	0	ID=cds2952;Name=YP_002404099.1;Parent=gene3178;Note=Transfers fatty acids to the 1-position via an enzyme-bound acyl-ACP intermediate in the presence of ATP and magnesium. Its physiological function is to regenerate phosphatidylethanolamine from 2-acyl-glycero-3-phosphoethanolamine %282-acyl-GPE%29 formed by transacylation reactions or degradation by phospholipase A1;Dbxref=Genbank:YP_002404099.1,GeneID:7148831;gbkey=CDS;product=bifunctional acyl-%5Bacyl carrier protein%5D synthetase%2F2-acylglycerophosphoethanolamine acyltransferase;protein_id=YP_002404099.1;transl_table=11
NC_011748.1	RefSeq	gene	3193253	3193340	.	-	.	ID=gene3179;Name=omrA;Dbxref=GeneID:7145420;gbkey=Gene;gene=omrA;locus_tag=EC55989_misc_RNA_67
NC_011748.1	RefSeq	transcript	3193253	3193340	.	-	.	ID=rna132;Parent=gene3179;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 16359331%3B Product type n : RNA;Dbxref=GeneID:7145420;gbkey=misc_RNA;product=OmrA
NC_011748.1	RefSeq	exon	3193253	3193340	.	-	.	ID=id261;Parent=rna132;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 16359331%3B Product type n : RNA;Dbxref=GeneID:7145420;gbkey=misc_RNA;product=OmrA
NC_011748.1	RefSeq	gene	3193456	3193537	.	-	.	ID=gene3180;Name=omrB;Dbxref=GeneID:7147073;gbkey=Gene;gene=omrB;locus_tag=EC55989_misc_RNA_68
NC_011748.1	RefSeq	transcript	3193456	3193537	.	-	.	ID=rna133;Parent=gene3180;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 16359331%3B Product type n : RNA;Dbxref=GeneID:7147073;gbkey=misc_RNA;product=OmrB
NC_011748.1	RefSeq	exon	3193456	3193537	.	-	.	ID=id262;Parent=rna133;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 16359331%3B Product type n : RNA;Dbxref=GeneID:7147073;gbkey=misc_RNA;product=OmrB
NC_011748.1	RefSeq	gene	3193751	3194782	.	+	.	ID=gene3181;Name=galR;Dbxref=GeneID:7147074;gbkey=Gene;gene=galR;locus_tag=EC55989_3114
NC_011748.1	RefSeq	CDS	3193751	3194782	.	+	0	ID=cds2953;Name=YP_002404100.1;Parent=gene3181;Note=controls transcription of galETKM;Dbxref=Genbank:YP_002404100.1,GeneID:7147074;gbkey=CDS;product=DNA-binding transcriptional regulator GalR;protein_id=YP_002404100.1;transl_table=11
NC_011748.1	RefSeq	gene	3194789	3196051	.	-	.	ID=gene3182;Name=lysA;Dbxref=GeneID:7146252;gbkey=Gene;gene=lysA;locus_tag=EC55989_3115
NC_011748.1	RefSeq	CDS	3194789	3196051	.	-	0	ID=cds2954;Name=YP_002404101.1;Parent=gene3182;Note=catalyzes the decarboxylation of diaminopimelate into lysine%3B pyridoxal phosphate%28PLP%29-binding;Dbxref=Genbank:YP_002404101.1,GeneID:7146252;gbkey=CDS;product=diaminopimelate decarboxylase;protein_id=YP_002404101.1;transl_table=11
NC_011748.1	RefSeq	gene	3196173	3197108	.	+	.	ID=gene3183;Name=lysR;Dbxref=GeneID:7146755;gbkey=Gene;gene=lysR;locus_tag=EC55989_3116
NC_011748.1	RefSeq	CDS	3196173	3197108	.	+	0	ID=cds2955;Name=YP_002404102.1;Parent=gene3183;Note=activates the transcription of the lysA gene encoding diaminopimelate decarboxylase;Dbxref=Genbank:YP_002404102.1,GeneID:7146755;gbkey=CDS;product=DNA-binding transcriptional regulator LysR;protein_id=YP_002404102.1;transl_table=11
NC_011748.1	RefSeq	gene	3197095	3197787	.	-	.	ID=gene3184;Name=ygeA;Dbxref=GeneID:7146758;gbkey=Gene;gene=ygeA;locus_tag=EC55989_3117
NC_011748.1	RefSeq	CDS	3197095	3197787	.	-	0	ID=cds2956;Name=YP_002404103.1;Parent=gene3184;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 15135544%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002404103.1,GeneID:7146758;gbkey=CDS;product=racemase;protein_id=YP_002404103.1;transl_table=11
NC_011748.1	RefSeq	gene	3197916	3199334	.	-	.	ID=gene3185;Name=araE;Dbxref=GeneID:7148830;gbkey=Gene;gene=araE;locus_tag=EC55989_3118
NC_011748.1	RefSeq	CDS	3197916	3199334	.	-	0	ID=cds2957;Name=YP_002404104.1;Parent=gene3185;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 7030324%2C 90239116%2C 91154204%2C 2836407%2C 3543693%2C 6319708%3B Product type t : transporter;Dbxref=Genbank:YP_002404104.1,GeneID:7148830;gbkey=CDS;product=arabinose transporter;protein_id=YP_002404104.1;transl_table=11
NC_011748.1	RefSeq	gene	3199649	3200410	.	-	.	ID=gene3186;Name=kduD;Dbxref=GeneID:7145517;gbkey=Gene;gene=kduD;locus_tag=EC55989_3119
NC_011748.1	RefSeq	CDS	3199649	3200410	.	-	0	ID=cds2958;Name=YP_002404105.1;Parent=gene3186;Note=catalyzes the formation of 3-dehydro-2-deoxy-D-gluconate from 2-deoxy-D-gluconate;Dbxref=Genbank:YP_002404105.1,GeneID:7145517;gbkey=CDS;product=2-deoxy-D-gluconate 3-dehydrogenase;protein_id=YP_002404105.1;transl_table=11
NC_011748.1	RefSeq	gene	3200440	3201276	.	-	.	ID=gene3187;Name=kduI;Dbxref=GeneID:7146664;gbkey=Gene;gene=kduI;locus_tag=EC55989_3120
NC_011748.1	RefSeq	CDS	3200440	3201276	.	-	0	ID=cds2959;Name=YP_002404106.1;Parent=gene3187;Note=4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase%3B catalyzes the interconversion of 4-deoxy-L-threo-5-hexosulose uronate to 3-deoxy-D-glycero-2%2C5-hexodiulosonate;Dbxref=Genbank:YP_002404106.1,GeneID:7146664;gbkey=CDS;product=5-keto-4-deoxyuronate isomerase;protein_id=YP_002404106.1;transl_table=11
NC_011748.1	RefSeq	gene	3201563	3202744	.	-	.	ID=gene3188;Name=yqeF;Dbxref=GeneID:7146665;gbkey=Gene;gene=yqeF;locus_tag=EC55989_3121
NC_011748.1	RefSeq	CDS	3201563	3202744	.	-	0	ID=cds2960;Name=YP_002404107.1;Parent=gene3188;Note=Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase%2C catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation%3B in Rhizobia and Ralstonia is involved in PHB biosynthesis;Dbxref=Genbank:YP_002404107.1,GeneID:7146665;gbkey=CDS;product=acetyl-CoA acetyltransferase;protein_id=YP_002404107.1;transl_table=11
NC_011748.1	RefSeq	gene	3202999	3204228	.	+	.	ID=gene3189;Name=yqeG;Dbxref=GeneID:7149399;gbkey=Gene;gene=yqeG;locus_tag=EC55989_3122
NC_011748.1	RefSeq	CDS	3202999	3204228	.	+	0	ID=cds2961;Name=YP_002404108.1;Parent=gene3189;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002404108.1,GeneID:7149399;gbkey=CDS;product=transporter;protein_id=YP_002404108.1;transl_table=11
NC_011748.1	RefSeq	gene	3204688	3205320	.	+	.	ID=gene3190;Name=yqeH;Dbxref=GeneID:7149400;gbkey=Gene;gene=yqeH;locus_tag=EC55989_3123
NC_011748.1	RefSeq	CDS	3204688	3205320	.	+	0	ID=cds2962;Name=YP_002404109.1;Parent=gene3190;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404109.1,GeneID:7149400;gbkey=CDS;product=bipartite regulator domain;protein_id=YP_002404109.1;transl_table=11
NC_011748.1	RefSeq	gene	3205654	3206463	.	+	.	ID=gene3191;Name=yqeI;Dbxref=GeneID:7149401;gbkey=Gene;gene=yqeI;locus_tag=EC55989_3124
NC_011748.1	RefSeq	CDS	3205654	3206463	.	+	0	ID=cds2963;Name=YP_002404110.1;Parent=gene3191;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pr :  regulator;Dbxref=Genbank:YP_002404110.1,GeneID:7149401;gbkey=CDS;product=transcriptional regulator;protein_id=YP_002404110.1;transl_table=11
NC_011748.1	RefSeq	gene	3206456	3206938	.	+	.	ID=gene3192;Name=yqeJ;Dbxref=GeneID:7149402;gbkey=Gene;gene=yqeJ;locus_tag=EC55989_3125
NC_011748.1	RefSeq	CDS	3206456	3206938	.	+	0	ID=cds2964;Name=YP_002404111.1;Parent=gene3192;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404111.1,GeneID:7149402;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404111.1;transl_table=11
NC_011748.1	RefSeq	gene	3207087	3207512	.	-	.	ID=gene3193;Name=yqeK;Dbxref=GeneID:7149403;gbkey=Gene;gene=yqeK;locus_tag=EC55989_3126
NC_011748.1	RefSeq	CDS	3207087	3207512	.	-	0	ID=cds2965;Name=YP_002404112.1;Parent=gene3193;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404112.1,GeneID:7149403;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404112.1;transl_table=11
NC_011748.1	RefSeq	gene	3207706	3208143	.	+	.	ID=gene3194;Name=ygeF;Dbxref=GeneID:7149404;gbkey=Gene;gene=ygeF;locus_tag=EC55989_3127
NC_011748.1	RefSeq	CDS	3207706	3208143	.	+	0	ID=cds2966;Name=YP_002404113.1;Parent=gene3194;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404113.1,GeneID:7149404;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404113.1;transl_table=11
NC_011748.1	RefSeq	gene	3208421	3208912	.	+	.	ID=gene3195;Name=ygeG;Dbxref=GeneID:7148832;gbkey=Gene;gene=ygeG;locus_tag=EC55989_3128
NC_011748.1	RefSeq	CDS	3208421	3208912	.	+	0	ID=cds2967;Name=YP_002404114.1;Parent=gene3195;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pc :  carrier;Dbxref=Genbank:YP_002404114.1,GeneID:7148832;gbkey=CDS;product=chaperone;protein_id=YP_002404114.1;transl_table=11
NC_011748.1	RefSeq	gene	3209247	3210623	.	+	.	ID=gene3196;Name=ygeH;Dbxref=GeneID:7148833;gbkey=Gene;gene=ygeH;locus_tag=EC55989_3129
NC_011748.1	RefSeq	CDS	3209247	3210623	.	+	0	ID=cds2968;Name=YP_002404115.1;Parent=gene3196;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 15150243%3B Product type pr :  regulator;Dbxref=Genbank:YP_002404115.1,GeneID:7148833;gbkey=CDS;product=transcriptional regulator;protein_id=YP_002404115.1;transl_table=11
NC_011748.1	RefSeq	gene	3210791	3211009	.	+	.	ID=gene3197;Name=ygeI;Dbxref=GeneID:7148834;gbkey=Gene;gene=ygeI;locus_tag=EC55989_3130
NC_011748.1	RefSeq	CDS	3210791	3211009	.	+	0	ID=cds2969;Name=YP_002404116.1;Parent=gene3197;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404116.1,GeneID:7148834;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404116.1;transl_table=11
NC_011748.1	RefSeq	gene	3211092	3211568	.	+	.	ID=gene3198;Name=EC55989_3132;Dbxref=GeneID:7148835;gbkey=Gene;locus_tag=EC55989_3132
NC_011748.1	RefSeq	CDS	3211092	3211568	.	+	0	ID=cds2970;Name=YP_002404117.1;Parent=gene3198;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002404117.1,GeneID:7148835;gbkey=CDS;product=peptidoglycan-binding-like protein precursor;protein_id=YP_002404117.1;transl_table=11
NC_011748.1	RefSeq	gene	3211613	3212059	.	-	.	ID=gene3199;Name=EC55989_3133;Dbxref=GeneID:7144865;gbkey=Gene;locus_tag=EC55989_3133;pseudo=true
NC_011748.1	RefSeq	region	3211613	3212059	.	-	.	ID=id263;Note=fragment of   Bacterial regulatory protein LuxR family %28part 2%29%3BEvidence 7 : Gene remnant;Dbxref=GeneID:7144865;gbkey=misc_feature
NC_011748.1	RefSeq	gene	3212090	3212245	.	-	.	ID=gene3200;Name=EC55989_3134;Dbxref=GeneID:7144866;gbkey=Gene;locus_tag=EC55989_3134;pseudo=true
NC_011748.1	RefSeq	region	3212090	3212245	.	-	.	ID=id264;Note=fragment of   Bacterial regulatory protein LuxR family %28part 1%29%3BEvidence 7 : Gene remnant;Dbxref=GeneID:7144866;gbkey=misc_feature
NC_011748.1	RefSeq	gene	3212466	3212897	.	-	.	ID=gene3201;Name=ygeM;Dbxref=GeneID:7144867;gbkey=Gene;gene=ygeM;locus_tag=EC55989_3135
NC_011748.1	RefSeq	CDS	3212466	3212897	.	-	0	ID=cds2971;Name=YP_002404118.1;Parent=gene3201;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404118.1,GeneID:7144867;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404118.1;transl_table=11
NC_011748.1	RefSeq	gene	3213114	3213695	.	-	.	ID=gene3202;Name=EC55989_3136;Dbxref=GeneID:7148836;gbkey=Gene;locus_tag=EC55989_3136
NC_011748.1	RefSeq	CDS	3213114	3213695	.	-	0	ID=cds2972;Name=YP_002404119.1;Parent=gene3202;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 12791847;Dbxref=Genbank:YP_002404119.1,GeneID:7148836;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404119.1;transl_table=11
NC_011748.1	RefSeq	gene	3213711	3214445	.	-	.	ID=gene3203;Name=eprK;Dbxref=GeneID:7144868;gbkey=Gene;gene=eprK;locus_tag=EC55989_3137
NC_011748.1	RefSeq	CDS	3213711	3214445	.	-	0	ID=cds2973;Name=YP_002404120.1;Parent=gene3203;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 12791847%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002404120.1,GeneID:7144868;gbkey=CDS;product=Type III secretion system lipoprotein EprK;protein_id=YP_002404120.1;transl_table=11
NC_011748.1	RefSeq	gene	3214486	3214701	.	-	.	ID=gene3204;Name=EC55989_3138;Dbxref=GeneID:7146014;gbkey=Gene;locus_tag=EC55989_3138;pseudo=true
NC_011748.1	RefSeq	region	3214486	3214701	.	-	.	ID=id265;Note=fragment of   type III secretion apparatus protein %28partial%29%3BEvidence 7 : Gene remnant;Dbxref=GeneID:7146014;gbkey=misc_feature
NC_011748.1	RefSeq	gene	3214878	3215033	.	-	.	ID=gene3205;Name=eprI;Dbxref=GeneID:7144869;gbkey=Gene;gene=eprI;locus_tag=EC55989_3139
NC_011748.1	RefSeq	CDS	3214878	3215033	.	-	0	ID=cds2974;Name=YP_002404121.1;Parent=gene3205;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 12791847%3B Product type pt :  transporter;Dbxref=Genbank:YP_002404121.1,GeneID:7144869;gbkey=CDS;product=Type III secretion EprI protein;protein_id=YP_002404121.1;transl_table=11
NC_011748.1	RefSeq	gene	3215047	3216237	.	-	.	ID=gene3206;Name=eprH;Dbxref=GeneID:7146013;gbkey=Gene;gene=eprH;locus_tag=EC55989_3140
NC_011748.1	RefSeq	CDS	3215047	3216237	.	-	0	ID=cds2975;Name=YP_002404122.1;Parent=gene3206;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002404122.1,GeneID:7146013;gbkey=CDS;product=Type III secretion EprH protein;protein_id=YP_002404122.1;transl_table=11
NC_011748.1	RefSeq	gene	3216486	3216986	.	+	.	ID=gene3207;Name=EC55989_3141;Dbxref=GeneID:7146012;gbkey=Gene;locus_tag=EC55989_3141
NC_011748.1	RefSeq	CDS	3216486	3216986	.	+	0	ID=cds2976;Name=YP_002404123.1;Parent=gene3207;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 12791847;Dbxref=Genbank:YP_002404123.1,GeneID:7146012;gbkey=CDS;product=response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain;protein_id=YP_002404123.1;transl_table=11
NC_011748.1	RefSeq	gene	3216988	3217281	.	+	.	ID=gene3208;Name=EC55989_3142;Dbxref=GeneID:7144870;gbkey=Gene;locus_tag=EC55989_3142
NC_011748.1	RefSeq	CDS	3216988	3217281	.	+	0	ID=cds2977;Name=YP_002404124.1;Parent=gene3208;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 12791847;Dbxref=Genbank:YP_002404124.1,GeneID:7144870;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404124.1;transl_table=11
NC_011748.1	RefSeq	gene	3217343	3217735	.	-	.	ID=gene3209;Name=spaS;Dbxref=GeneID:7144871;gbkey=Gene;gene=spaS;locus_tag=EC55989_3143;pseudo=true
NC_011748.1	RefSeq	region	3217343	3217735	.	-	.	ID=id266;Note=fragment of Surface presentation of antigens protein %28part 3%29%3BEvidence 7 : Gene remnant%3B Product type m : membrane component;Dbxref=GeneID:7144871;gbkey=misc_feature
NC_011748.1	RefSeq	gene	3217732	3217935	.	-	.	ID=gene3210;Name=spaS;Dbxref=GeneID:7147682;gbkey=Gene;gene=spaS;locus_tag=EC55989_3144;pseudo=true
NC_011748.1	RefSeq	region	3217732	3217935	.	-	.	ID=id267;Note=fragment of Surface presentation of antigens protein %28part 2%29%3BEvidence 7 : Gene remnant%3B Product type m : membrane component;Dbxref=GeneID:7147682;gbkey=misc_feature
NC_011748.1	RefSeq	gene	3218008	3218499	.	-	.	ID=gene3211;Name=spaS;Dbxref=GeneID:7147683;gbkey=Gene;gene=spaS;locus_tag=EC55989_3145;pseudo=true
NC_011748.1	RefSeq	region	3218008	3218499	.	-	.	ID=id268;Note=fragment of Surface presentation of antigens protein %28part 1%29%3BEvidence 7 : Gene remnant%3B Product type m : membrane component;Dbxref=GeneID:7147683;gbkey=misc_feature
NC_011748.1	RefSeq	gene	3218508	3219275	.	-	.	ID=gene3212;Name=EC55989_3146;Dbxref=GeneID:7147684;gbkey=Gene;locus_tag=EC55989_3146
NC_011748.1	RefSeq	CDS	3218508	3219275	.	-	0	ID=cds2978;Name=YP_002404125.1;Parent=gene3212;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 12791847%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002404125.1,GeneID:7147684;gbkey=CDS;product=Type III secretion protein EpaR;protein_id=YP_002404125.1;transl_table=11
NC_011748.1	RefSeq	gene	3219277	3219537	.	-	.	ID=gene3213;Name=spaQ;Dbxref=GeneID:7144872;gbkey=Gene;gene=spaQ;locus_tag=EC55989_3147;pseudo=true
NC_011748.1	RefSeq	region	3219277	3219537	.	-	.	ID=id269;Note=fragment of surface presentation of antigens protein %28partial%29%3BEvidence 7 : Gene remnant%3B Product type pm :  membrane component;Dbxref=GeneID:7144872;gbkey=misc_feature
NC_011748.1	RefSeq	gene	3219547	3220212	.	-	.	ID=gene3214;Name=spaP;Dbxref=GeneID:7147681;gbkey=Gene;gene=spaP;locus_tag=EC55989_3148
NC_011748.1	RefSeq	CDS	3219547	3220212	.	-	0	ID=cds2979;Name=YP_002404126.1;Parent=gene3214;Note=part of a type III secretory system probably involved in invasion into eukaryotic cells;Dbxref=Genbank:YP_002404126.1,GeneID:7147681;gbkey=CDS;product=surface presentation of antigens protein SpaP;protein_id=YP_002404126.1;transl_table=11
NC_011748.1	RefSeq	gene	3220127	3220774	.	-	.	ID=gene3215;Name=epaO;Dbxref=GeneID:7144873;gbkey=Gene;gene=epaO;locus_tag=EC55989_3149;pseudo=true
NC_011748.1	RefSeq	region	3220127	3220774	.	-	.	ID=id270;Note=fragment of Type III secretion apparatus protein %28part 2%29%3BEvidence 7 : Gene remnant%3B Product type t : transporter;Dbxref=GeneID:7144873;gbkey=misc_feature
NC_011748.1	RefSeq	gene	3220784	3221149	.	-	.	ID=gene3216;Name=epaO;Dbxref=GeneID:7146009;gbkey=Gene;gene=epaO;locus_tag=EC55989_3150;pseudo=true
NC_011748.1	RefSeq	region	3220784	3221149	.	-	.	ID=id271;Note=fragment of Type III secretion apparatus protein %28part 1%29%3BEvidence 7 : Gene remnant%3B Product type t : transporter;Dbxref=GeneID:7146009;gbkey=misc_feature
NC_011748.1	RefSeq	gene	3221281	3222933	.	-	.	ID=gene3217;Name=EC55989_3151;Dbxref=GeneID:7146010;gbkey=Gene;locus_tag=EC55989_3151
NC_011748.1	RefSeq	CDS	3221281	3222933	.	-	0	ID=cds2980;Name=YP_002404127.1;Parent=gene3217;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404127.1,GeneID:7146010;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404127.1;transl_table=11
NC_011748.1	RefSeq	gene	3223125	3223198	.	-	.	ID=gene3218;Name=EC55989_tRNA66;Dbxref=GeneID:7144874;gbkey=Gene;locus_tag=EC55989_tRNA66
NC_011748.1	RefSeq	tRNA	3223125	3223198	.	-	.	ID=rna134;Dbxref=GeneID:7144874;gbkey=tRNA;product=tRNA-Gly
NC_011748.1	RefSeq	exon	3223125	3223198	.	-	.	ID=id272;Parent=rna134;Dbxref=GeneID:7144874;gbkey=tRNA;product=tRNA-Gly
NC_011748.1	RefSeq	gene	3223277	3224032	.	-	.	ID=gene3219;Name=ygeR;Dbxref=GeneID:7145379;gbkey=Gene;gene=ygeR;locus_tag=EC55989_3152
NC_011748.1	RefSeq	CDS	3223277	3224032	.	-	0	ID=cds2981;Name=YP_002404128.1;Parent=gene3219;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 15150243%3B Product type r : regulator;Dbxref=Genbank:YP_002404128.1,GeneID:7145379;gbkey=CDS;product=Tetratricopeptide repeat transcriptional regulator;protein_id=YP_002404128.1;transl_table=11
NC_011748.1	RefSeq	gene	3224486	3226744	.	+	.	ID=gene3220;Name=xdhA;Dbxref=GeneID:7148837;gbkey=Gene;gene=xdhA;locus_tag=EC55989_3153
NC_011748.1	RefSeq	CDS	3224486	3226744	.	+	0	ID=cds2982;Name=YP_002404129.1;Parent=gene3220;Note=molybdenum cofactor-binding protein%3B participates in purine salvage;Dbxref=Genbank:YP_002404129.1,GeneID:7148837;gbkey=CDS;product=xanthine dehydrogenase subunit XdhA;protein_id=YP_002404129.1;transl_table=11
NC_011748.1	RefSeq	gene	3226755	3227633	.	+	.	ID=gene3221;Name=xdhB;Dbxref=GeneID:7147985;gbkey=Gene;gene=xdhB;locus_tag=EC55989_3154
NC_011748.1	RefSeq	CDS	3226755	3227633	.	+	0	ID=cds2983;Name=YP_002404130.1;Parent=gene3221;Note=FAD-binding subunit%3B with XdhA and XdhC participates in purine salvage;Dbxref=Genbank:YP_002404130.1,GeneID:7147985;gbkey=CDS;product=xanthine dehydrogenase subunit XdhB;protein_id=YP_002404130.1;transl_table=11
NC_011748.1	RefSeq	gene	3227630	3228109	.	+	.	ID=gene3222;Name=xdhC;Dbxref=GeneID:7147986;gbkey=Gene;gene=xdhC;locus_tag=EC55989_3155
NC_011748.1	RefSeq	CDS	3227630	3228109	.	+	0	ID=cds2984;Name=YP_002404131.1;Parent=gene3222;Note=iron-sulfur-binding subunit%3B with XdhA and XdhB participates in purine salvage;Dbxref=Genbank:YP_002404131.1,GeneID:7147986;gbkey=CDS;product=xanthine dehydrogenase subunit XdhC;protein_id=YP_002404131.1;transl_table=11
NC_011748.1	RefSeq	gene	3228149	3229927	.	-	.	ID=gene3223;Name=ygeV;Dbxref=GeneID:7147987;gbkey=Gene;gene=ygeV;locus_tag=EC55989_3156
NC_011748.1	RefSeq	CDS	3228149	3229927	.	-	0	ID=cds2985;Name=YP_002404132.1;Parent=gene3223;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pr :  regulator;Dbxref=Genbank:YP_002404132.1,GeneID:7147987;gbkey=CDS;product=DNA-binding transcriptional regulator;protein_id=YP_002404132.1;transl_table=11
NC_011748.1	RefSeq	gene	3230403	3231593	.	+	.	ID=gene3224;Name=ygeW;Dbxref=GeneID:7148838;gbkey=Gene;gene=ygeW;locus_tag=EC55989_3157
NC_011748.1	RefSeq	CDS	3230403	3231593	.	+	0	ID=cds2986;Name=YP_002404133.1;Parent=gene3224;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404133.1,GeneID:7148838;gbkey=CDS;product=aspartate%2Fornithine carbamoyltransferase;protein_id=YP_002404133.1;transl_table=11
NC_011748.1	RefSeq	STS	3230899	3231075	.	+	.	ID=id273;Dbxref=UniSTS:30406,GeneID:7148838;gbkey=STS
NC_011748.1	RefSeq	gene	3231651	3232847	.	+	.	ID=gene3225;Name=ygeX;Dbxref=GeneID:7148839;gbkey=Gene;gene=ygeX;locus_tag=EC55989_3158
NC_011748.1	RefSeq	CDS	3231651	3232847	.	+	0	ID=cds2987;Name=YP_002404134.1;Parent=gene3225;Note=catalyzes the formation of pyruvate from 2%2C3-diaminopropionate;Dbxref=Genbank:YP_002404134.1,GeneID:7148839;gbkey=CDS;product=diaminopropionate ammonia-lyase;protein_id=YP_002404134.1;transl_table=11
NC_011748.1	RefSeq	gene	3232905	3234116	.	+	.	ID=gene3226;Name=ygeY;Dbxref=GeneID:7148840;gbkey=Gene;gene=ygeY;locus_tag=EC55989_3159
NC_011748.1	RefSeq	CDS	3232905	3234116	.	+	0	ID=cds2988;Name=YP_002404135.1;Parent=gene3226;Note=Zn-dependent extracellular dipeptidase%3B similar to succinyl-diaminopimelate desuccinylases;Dbxref=Genbank:YP_002404135.1,GeneID:7148840;gbkey=CDS;product=peptidase;protein_id=YP_002404135.1;transl_table=11
NC_011748.1	RefSeq	gene	3234169	3235554	.	+	.	ID=gene3227;Name=hyuA;Dbxref=GeneID:7148841;gbkey=Gene;gene=hyuA;locus_tag=EC55989_3160
NC_011748.1	RefSeq	CDS	3234169	3235554	.	+	0	ID=cds2989;Name=YP_002404136.1;Parent=gene3227;Note=catalyzes the hydrolytic cleavage of hydantoin with aromatic side chains at the 5%27position;Dbxref=Genbank:YP_002404136.1,GeneID:7148841;gbkey=CDS;product=phenylhydantoinase;protein_id=YP_002404136.1;transl_table=11
NC_011748.1	RefSeq	gene	3235602	3236534	.	+	.	ID=gene3228;Name=yqeA;Dbxref=GeneID:7146526;gbkey=Gene;gene=yqeA;locus_tag=EC55989_3161
NC_011748.1	RefSeq	CDS	3235602	3236534	.	+	0	ID=cds2990;Name=YP_002404137.1;Parent=gene3228;Note=catalyzes the reversible synthesis of carbamate and ATP from carbamoyl phosphate and ADP;Dbxref=Genbank:YP_002404137.1,GeneID:7146526;gbkey=CDS;product=carbamate kinase;protein_id=YP_002404137.1;transl_table=11
NC_011748.1	RefSeq	gene	3236575	3238200	.	-	.	ID=gene3229;Name=yqeB;Dbxref=GeneID:7149396;gbkey=Gene;gene=yqeB;locus_tag=EC55989_3162
NC_011748.1	RefSeq	CDS	3236575	3238200	.	-	0	ID=cds2991;Name=YP_002404138.1;Parent=gene3229;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404138.1,GeneID:7149396;gbkey=CDS;product=NAD%28P%29-binding Rossman fold;protein_id=YP_002404138.1;transl_table=11
NC_011748.1	RefSeq	gene	3238248	3239018	.	-	.	ID=gene3230;Name=yqeC;Dbxref=GeneID:7149397;gbkey=Gene;gene=yqeC;locus_tag=EC55989_3163
NC_011748.1	RefSeq	CDS	3238248	3239018	.	-	0	ID=cds2992;Name=YP_002404139.1;Parent=gene3230;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404139.1,GeneID:7149397;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404139.1;transl_table=11
NC_011748.1	RefSeq	gene	3239121	3239699	.	+	.	ID=gene3231;Name=ygfJ;Dbxref=GeneID:7149398;gbkey=Gene;gene=ygfJ;locus_tag=EC55989_3164
NC_011748.1	RefSeq	CDS	3239121	3239699	.	+	0	ID=cds2993;Name=YP_002404140.1;Parent=gene3231;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404140.1,GeneID:7149398;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404140.1;transl_table=11
NC_011748.1	RefSeq	gene	3240021	3243119	.	+	.	ID=gene3232;Name=ygfK;Dbxref=GeneID:7148848;gbkey=Gene;gene=ygfK;locus_tag=EC55989_3165
NC_011748.1	RefSeq	CDS	3240021	3243119	.	+	0	ID=cds2994;Name=YP_002404141.1;Parent=gene3232;Note=with YgfM and YgfN forms a selenate reductase%2C which seems to catalyze the reduction of selenate to selenite%3B YgfK mutants are unable to reduce selenate%3B involved in purine salvage process%3B seems to act as an oxidoreductase%2C but sequence similarity suggests it is a dihydrothymine dehydrogenase;Dbxref=Genbank:YP_002404141.1,GeneID:7148848;gbkey=CDS;product=selenate reductase subunit YgfK;protein_id=YP_002404141.1;transl_table=11
NC_011748.1	RefSeq	gene	3243122	3244450	.	+	.	ID=gene3233;Name=ssnA;Dbxref=GeneID:7148849;gbkey=Gene;gene=ssnA;locus_tag=EC55989_3166
NC_011748.1	RefSeq	CDS	3243122	3244450	.	+	0	ID=cds2995;Name=YP_002404142.1;Parent=gene3233;Note=in Escherichia coli expression is induced in response to phase-specific signals and controlled by RpoS;Dbxref=Genbank:YP_002404142.1,GeneID:7148849;gbkey=CDS;product=chlorohydrolase%2Faminohydrolase;protein_id=YP_002404142.1;transl_table=11
NC_011748.1	RefSeq	gene	3244501	3245280	.	+	.	ID=gene3234;Name=ygfM;Dbxref=GeneID:7147713;gbkey=Gene;gene=ygfM;locus_tag=EC55989_3167
NC_011748.1	RefSeq	CDS	3244501	3245280	.	+	0	ID=cds2996;Name=YP_002404143.1;Parent=gene3234;Note=with YgfK and YgfN forms a selenate reductase%2C which seems to catalyze the reduction of selenate to selenite%3B YgfM contains a FAD domain;Dbxref=Genbank:YP_002404143.1,GeneID:7147713;gbkey=CDS;product=selenate reductase subunit YgfM;protein_id=YP_002404143.1;transl_table=11
NC_011748.1	RefSeq	gene	3245277	3248147	.	+	.	ID=gene3235;Name=xdhD;Dbxref=GeneID:7148850;gbkey=Gene;gene=xdhD;locus_tag=EC55989_3168
NC_011748.1	RefSeq	CDS	3245277	3248147	.	+	0	ID=cds2997;Name=YP_002404144.1;Parent=gene3235;Note=with YgfK and YgfM forms a selenate reductase%2C which seems to catalyze the reduction of selenate to selenite%3B molybdopterin-containing enzyme%3B oxidase activity toward hypoxanthine and xanthine can be detected if these substrates are present at high concentration;Dbxref=Genbank:YP_002404144.1,GeneID:7148850;gbkey=CDS;product=selenate reductase subunit YgfN;protein_id=YP_002404144.1;transl_table=11
NC_011748.1	RefSeq	gene	3248312	3249712	.	+	.	ID=gene3236;Name=ygfO;Dbxref=GeneID:7147988;gbkey=Gene;gene=ygfO;locus_tag=EC55989_3169
NC_011748.1	RefSeq	CDS	3248312	3249712	.	+	0	ID=cds2998;Name=YP_002404145.1;Parent=gene3236;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 20372655%2C 98213740%3B Product type pt :  transporter;Dbxref=Genbank:YP_002404145.1,GeneID:7147988;gbkey=CDS;product=transporter;protein_id=YP_002404145.1;transl_table=11
NC_011748.1	RefSeq	gene	3249727	3251046	.	+	.	ID=gene3237;Name=guaD;Dbxref=GeneID:7148851;gbkey=Gene;gene=guaD;locus_tag=EC55989_3170
NC_011748.1	RefSeq	CDS	3249727	3251046	.	+	0	ID=cds2999;Name=YP_002404146.1;Parent=gene3237;Note=Catalyzes the deamination of guanine;Dbxref=Genbank:YP_002404146.1,GeneID:7148851;gbkey=CDS;product=guanine deaminase;protein_id=YP_002404146.1;transl_table=11
NC_011748.1	RefSeq	gene	3251082	3252449	.	+	.	ID=gene3238;Name=ygfQ;Dbxref=GeneID:7146381;gbkey=Gene;gene=ygfQ;locus_tag=EC55989_3171
NC_011748.1	RefSeq	CDS	3251082	3252449	.	+	0	ID=cds3000;Name=YP_002404147.1;Parent=gene3238;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002404147.1,GeneID:7146381;gbkey=CDS;product=transporter;protein_id=YP_002404147.1;transl_table=11
NC_011748.1	RefSeq	gene	3252485	3252973	.	-	.	ID=gene3239;Name=ygfS;Dbxref=GeneID:7148852;gbkey=Gene;gene=ygfS;locus_tag=EC55989_3172
NC_011748.1	RefSeq	CDS	3252485	3252973	.	-	0	ID=cds3001;Name=YP_002404148.1;Parent=gene3239;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pc :  carrier;Dbxref=Genbank:YP_002404148.1,GeneID:7148852;gbkey=CDS;product=oxidoreductase%2C 4Fe-4S ferredoxin-type subunit;protein_id=YP_002404148.1;transl_table=11
NC_011748.1	RefSeq	gene	3252973	3254892	.	-	.	ID=gene3240;Name=ygfT;Dbxref=GeneID:7148853;gbkey=Gene;gene=ygfT;locus_tag=EC55989_3173
NC_011748.1	RefSeq	CDS	3252973	3254892	.	-	0	ID=cds3002;Name=YP_002404149.1;Parent=gene3240;Note=unknown function%3B in E. coli the aegA gene is regulated by Fnr%2C NarXL%2C and NarQ %28but not ArcA%29%2C induced under anaerobic conditions and repressed in the presence of nitrate %28anaerobic%29;Dbxref=Genbank:YP_002404149.1,GeneID:7148853;gbkey=CDS;product=oxidoreductase Fe-S binding subunit;protein_id=YP_002404149.1;transl_table=11
NC_011748.1	RefSeq	gene	3255328	3256776	.	+	.	ID=gene3241;Name=ygfU;Dbxref=GeneID:7148854;gbkey=Gene;gene=ygfU;locus_tag=EC55989_3174
NC_011748.1	RefSeq	CDS	3255328	3256776	.	+	0	ID=cds3003;Name=YP_002404150.1;Parent=gene3241;Note=Evidence 2b : Function of strongly homologous gene%3B PubMedId : 9098051%3B Product type t : transporter;Dbxref=Genbank:YP_002404150.1,GeneID:7148854;gbkey=CDS;product=transporter;protein_id=YP_002404150.1;transl_table=11
NC_011748.1	RefSeq	gene	3257026	3257574	.	+	.	ID=gene3242;Name=idi;Dbxref=GeneID:7148855;gbkey=Gene;gene=idi;locus_tag=EC55989_3175
NC_011748.1	RefSeq	CDS	3257026	3257574	.	+	0	ID=cds3004;Name=YP_002404151.1;Parent=gene3242;Note=catalyzes the rearrangement of isopentenyl diphosphate to dimethylallyl phosphate;Dbxref=Genbank:YP_002404151.1,GeneID:7148855;gbkey=CDS;product=isopentenyl-diphosphate delta-isomerase;protein_id=YP_002404151.1;transl_table=11
NC_011748.1	RefSeq	gene	3257617	3259134	.	-	.	ID=gene3243;Name=lysS;Dbxref=GeneID:7146539;gbkey=Gene;gene=lysS;locus_tag=EC55989_3176
NC_011748.1	RefSeq	CDS	3257617	3259134	.	-	0	ID=cds3005;Name=YP_002404152.1;Parent=gene3243;Note=class II%3B LysRS2%3B catalyzes a two-step reaction%2C first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B in Methanosarcina barkeri%2C LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1;Dbxref=Genbank:YP_002404152.1,GeneID:7146539;gbkey=CDS;product=lysyl-tRNA synthetase;protein_id=YP_002404152.1;transl_table=11
NC_011748.1	RefSeq	STS	3259052	3259163	.	+	.	ID=id274;Dbxref=UniSTS:473752;gbkey=STS
NC_011748.1	RefSeq	gene	3259144	3260242	.	-	.	ID=gene3244;Name=prfB;Dbxref=GeneID:7146759;gbkey=Gene;gene=prfB;locus_tag=EC55989_3177
NC_011748.1	RefSeq	CDS	3260168	3260242	.	-	0	ID=cds3006;Name=YP_002404153.1;Parent=gene3244;Note=recognizes the termination signals UGA and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF2%3B in some organisms control of PrfB protein levels is maintained through a %2B1 ribosomal frameshifting mechanism%3B this protein is similar to release factor 1;Dbxref=Genbank:YP_002404153.1,GeneID:7146759;gbkey=CDS;product=peptide chain release factor 2;protein_id=YP_002404153.1;transl_table=11
NC_011748.1	RefSeq	CDS	3259144	3260166	.	-	0	ID=cds3006;Name=YP_002404153.1;Parent=gene3244;Note=recognizes the termination signals UGA and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF2%3B in some organisms control of PrfB protein levels is maintained through a %2B1 ribosomal frameshifting mechanism%3B this protein is similar to release factor 1;Dbxref=Genbank:YP_002404153.1,GeneID:7146759;gbkey=CDS;product=peptide chain release factor 2;protein_id=YP_002404153.1;transl_table=11
NC_011748.1	RefSeq	gene	3260333	3262066	.	-	.	ID=gene3245;Name=recJ;Dbxref=GeneID:7147241;gbkey=Gene;gene=recJ;locus_tag=EC55989_3178
NC_011748.1	RefSeq	CDS	3260333	3262066	.	-	0	ID=cds3007;Name=YP_002404154.1;Parent=gene3245;Note=5%27-3%27 single-stranded-DNA-specific exonuclease;Dbxref=Genbank:YP_002404154.1,GeneID:7147241;gbkey=CDS;product=ssDNA exonuclease RecJ;protein_id=YP_002404154.1;transl_table=11
NC_011748.1	RefSeq	gene	3262072	3262782	.	-	.	ID=gene3246;Name=dsbC;Dbxref=GeneID:7147363;gbkey=Gene;gene=dsbC;locus_tag=EC55989_3179
NC_011748.1	RefSeq	CDS	3262072	3262782	.	-	0	ID=cds3008;Name=YP_002404155.1;Parent=gene3246;Note=DsbC%3B periplasmic protein with protein disulfide isomerase activity%3B this protein also shows disulfide oxidoreductase activity;Dbxref=Genbank:YP_002404155.1,GeneID:7147363;gbkey=CDS;product=thiol:disulfide interchange protein DsbC;protein_id=YP_002404155.1;transl_table=11
NC_011748.1	RefSeq	gene	3262807	3263703	.	-	.	ID=gene3247;Name=xerD;Dbxref=GeneID:7145952;gbkey=Gene;gene=xerD;locus_tag=EC55989_3180
NC_011748.1	RefSeq	CDS	3262807	3263703	.	-	0	ID=cds3009;Name=YP_002404156.1;Parent=gene3247;Note=site-specific tyrosine recombinase which cuts and rejoins DNA molecules%3B binds cooperatively to specific DNA consensus sites%3B forms a heterotetrameric complex with XerC%3B XerCD exhibit similar sequences%3B essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation%3B XerD specifically exchanges the bottom strands%3B cell division protein FtsK may regulate the XerCD complex%3B enzyme from Streptococcus group has unusual active site motifs;Dbxref=Genbank:YP_002404156.1,GeneID:7145952;gbkey=CDS;product=site-specific tyrosine recombinase XerD;protein_id=YP_002404156.1;transl_table=11
NC_011748.1	RefSeq	gene	3263815	3264336	.	+	.	ID=gene3248;Name=fldB;Dbxref=GeneID:7147990;gbkey=Gene;gene=fldB;locus_tag=EC55989_3181
NC_011748.1	RefSeq	CDS	3263815	3264336	.	+	0	ID=cds3010;Name=YP_002404157.1;Parent=gene3248;Note=An electron-transfer protein%3B flavodoxin binds one FMN molecule%2C which serves as a redox-active prosthetic;Dbxref=Genbank:YP_002404157.1,GeneID:7147990;gbkey=CDS;product=flavodoxin FldB;protein_id=YP_002404157.1;transl_table=11
NC_011748.1	RefSeq	gene	3264376	3264783	.	-	.	ID=gene3249;Name=ygfX;Dbxref=GeneID:7146123;gbkey=Gene;gene=ygfX;locus_tag=EC55989_3182
NC_011748.1	RefSeq	CDS	3264376	3264783	.	-	0	ID=cds3011;Name=YP_002404158.1;Parent=gene3249;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404158.1,GeneID:7146123;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404158.1;transl_table=11
NC_011748.1	RefSeq	gene	3264764	3265030	.	-	.	ID=gene3250;Name=ygfY;Dbxref=GeneID:7148856;gbkey=Gene;gene=ygfY;locus_tag=EC55989_3183
NC_011748.1	RefSeq	CDS	3264764	3265030	.	-	0	ID=cds3012;Name=YP_002404159.1;Parent=gene3250;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404159.1,GeneID:7148856;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404159.1;transl_table=11
NC_011748.1	RefSeq	gene	3265273	3266253	.	+	.	ID=gene3251;Name=ygfZ;Dbxref=GeneID:7148857;gbkey=Gene;gene=ygfZ;locus_tag=EC55989_3184
NC_011748.1	RefSeq	CDS	3265273	3266253	.	+	0	ID=cds3013;Name=YP_002404160.1;Parent=gene3251;Note=physiological role is not clear%3B not essential for growth but mutants grow poorly%3B mutations suppress hda null mutations%3B may be involved in regulation of ATP-DnaA levels%3B may also be involved in regulation of tRNA modifications%3B can bind folic acid and tetrahydrofolate%3B forms a three domain ring-like structure with a central channel%3B structurally similar to DMGO protein from A. globiformis%3B shows sequence similarity to yeast CAF17 transcriptional regulator;Dbxref=Genbank:YP_002404160.1,GeneID:7148857;gbkey=CDS;product=global regulator;protein_id=YP_002404160.1;transl_table=11
NC_011748.1	RefSeq	gene	3266506	3267486	.	+	.	ID=gene3252;Name=EC55989_3185;Dbxref=GeneID:7148858;gbkey=Gene;locus_tag=EC55989_3185
NC_011748.1	RefSeq	CDS	3266506	3267486	.	+	0	ID=cds3014;Name=YP_002404161.1;Parent=gene3252;Note=Evidence 2b : Function of strongly homologous gene%3B Product type e : enzyme;Dbxref=Genbank:YP_002404161.1,GeneID:7148858;gbkey=CDS;product=transposase%2C IS110 family;protein_id=YP_002404161.1;transl_table=11
NC_011748.1	RefSeq	gene	3267609	3268268	.	-	.	ID=gene3253;Name=yqfA;Dbxref=GeneID:7144875;gbkey=Gene;gene=yqfA;locus_tag=EC55989_3186
NC_011748.1	RefSeq	CDS	3267609	3268268	.	-	0	ID=cds3015;Name=YP_002404162.1;Parent=gene3253;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002404162.1,GeneID:7144875;gbkey=CDS;product=hemolysin%2C inner membrane subunit;protein_id=YP_002404162.1;transl_table=11
NC_011748.1	RefSeq	gene	3268432	3268743	.	-	.	ID=gene3254;Name=yqfB;Dbxref=GeneID:7149405;gbkey=Gene;gene=yqfB;locus_tag=EC55989_3187
NC_011748.1	RefSeq	CDS	3268432	3268743	.	-	0	ID=cds3016;Name=YP_002404163.1;Parent=gene3254;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404163.1,GeneID:7149405;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404163.1;transl_table=11
NC_011748.1	RefSeq	gene	3268782	3270221	.	+	.	ID=gene3255;Name=bglA;Dbxref=GeneID:7149406;gbkey=Gene;gene=bglA;locus_tag=EC55989_3188
NC_011748.1	RefSeq	CDS	3268782	3270221	.	+	0	ID=cds3017;Name=YP_002404164.1;Parent=gene3255;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 87222180%2C 88297127%2C 92334140%3B Product type e : enzyme;Dbxref=Genbank:YP_002404164.1,GeneID:7149406;gbkey=CDS;product=6-phospho-beta-glucosidase;protein_id=YP_002404164.1;transl_table=11
NC_011748.1	RefSeq	gene	3270278	3271021	.	-	.	ID=gene3256;Name=ygfF;Dbxref=GeneID:7145616;gbkey=Gene;gene=ygfF;locus_tag=EC55989_3189
NC_011748.1	RefSeq	CDS	3270278	3271021	.	-	0	ID=cds3018;Name=YP_002404165.1;Parent=gene3256;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002404165.1,GeneID:7145616;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404165.1;transl_table=11
NC_011748.1	RefSeq	gene	3271282	3274155	.	-	.	ID=gene3257;Name=gcvP;Dbxref=GeneID:7148844;gbkey=Gene;gene=gcvP;locus_tag=EC55989_3190
NC_011748.1	RefSeq	CDS	3271282	3274155	.	-	0	ID=cds3019;Name=YP_002404166.1;Parent=gene3257;Note=acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine;Dbxref=Genbank:YP_002404166.1,GeneID:7148844;gbkey=CDS;product=glycine dehydrogenase;protein_id=YP_002404166.1;transl_table=11
NC_011748.1	RefSeq	gene	3274274	3274663	.	-	.	ID=gene3258;Name=gcvH;Dbxref=GeneID:7146277;gbkey=Gene;gene=gcvH;locus_tag=EC55989_3191
NC_011748.1	RefSeq	CDS	3274274	3274663	.	-	0	ID=cds3020;Name=YP_002404167.1;Parent=gene3258;Note=part of multienzyme complex composed of H%2C L%2C P%2C and T proteins which catalyzes oxidation of glycine to yield carbon dioxide%2C ammonia%2C 5%2C10-CH2-H4folate and a reduced pyridine nucleotide%3B protein H is involved in transfer of methylamine group from the P to T protein%3B covalently bound to a lipoyl cofactor;Dbxref=Genbank:YP_002404167.1,GeneID:7146277;gbkey=CDS;product=glycine cleavage system protein H;protein_id=YP_002404167.1;transl_table=11
NC_011748.1	RefSeq	gene	3274687	3275781	.	-	.	ID=gene3259;Name=gcvT;Dbxref=GeneID:7146276;gbkey=Gene;gene=gcvT;locus_tag=EC55989_3192
NC_011748.1	RefSeq	CDS	3274687	3275781	.	-	0	ID=cds3021;Name=YP_002404168.1;Parent=gene3259;Note=catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate%2C causing the release of ammonia and the generation of reduced GcvH protein;Dbxref=Genbank:YP_002404168.1,GeneID:7146276;gbkey=CDS;product=glycine cleavage system aminomethyltransferase T;protein_id=YP_002404168.1;transl_table=11
NC_011748.1	RefSeq	gene	3276229	3277431	.	-	.	ID=gene3260;Name=visC;Dbxref=GeneID:7146279;gbkey=Gene;gene=visC;locus_tag=EC55989_3194
NC_011748.1	RefSeq	CDS	3276229	3277431	.	-	0	ID=cds3022;Name=YP_002404169.1;Parent=gene3260;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 1339425%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002404169.1,GeneID:7146279;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404169.1;transl_table=11
NC_011748.1	RefSeq	gene	3277454	3278632	.	-	.	ID=gene3261;Name=ubiH;Dbxref=GeneID:7147948;gbkey=Gene;gene=ubiH;locus_tag=EC55989_3195
NC_011748.1	RefSeq	CDS	3277454	3278632	.	-	0	ID=cds3023;Name=YP_002404170.1;Parent=gene3261;Note=Oxygenase that introduces the hydroxyl group at carbon four of 2-octaprenyl-6-methoxyphenol resulting in the formation of 2-octaprenyl-6-methoxy-1%2C4-benzoquinone;Dbxref=Genbank:YP_002404170.1,GeneID:7147948;gbkey=CDS;product=2-octaprenyl-6-methoxyphenyl hydroxylase;protein_id=YP_002404170.1;transl_table=11
NC_011748.1	RefSeq	gene	3278629	3279954	.	-	.	ID=gene3262;Name=pepP;Dbxref=GeneID:7147894;gbkey=Gene;gene=pepP;locus_tag=EC55989_3196
NC_011748.1	RefSeq	CDS	3278629	3279954	.	-	0	ID=cds3024;Name=YP_002404171.1;Parent=gene3262;Note=exopeptidase able to cleave the peptide bond of the last amino acid if linked to a proline residue%3B substrate can be as short as a dipeptide;Dbxref=Genbank:YP_002404171.1,GeneID:7147894;gbkey=CDS;product=proline aminopeptidase P II;protein_id=YP_002404171.1;transl_table=11
NC_011748.1	RefSeq	gene	3279980	3280558	.	-	.	ID=gene3263;Name=ygfB;Dbxref=GeneID:7147135;gbkey=Gene;gene=ygfB;locus_tag=EC55989_3197
NC_011748.1	RefSeq	CDS	3279980	3280558	.	-	0	ID=cds3025;Name=YP_002404172.1;Parent=gene3263;Note=the crystal structure of Haemophilus influenzae HI0817 showed that this protein forms dimers%3B function unknown;Dbxref=Genbank:YP_002404172.1,GeneID:7147135;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404172.1;transl_table=11
NC_011748.1	RefSeq	gene	3280726	3281055	.	+	.	ID=gene3264;Name=zapA;Dbxref=GeneID:7148843;gbkey=Gene;gene=zapA;locus_tag=EC55989_3198
NC_011748.1	RefSeq	CDS	3280726	3281055	.	+	0	ID=cds3026;Name=YP_002404173.1;Parent=gene3264;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 412171%3B Product type cp : cell process;Dbxref=Genbank:YP_002404173.1,GeneID:7148843;gbkey=CDS;product=Z-ring-associated protein;protein_id=YP_002404173.1;transl_table=11
NC_011748.1	RefSeq	gene	3281097	3281279	.	+	.	ID=gene3265;Name=ssrS;Dbxref=GeneID:7149487;gbkey=Gene;gene=ssrS;locus_tag=EC55989_misc_RNA_69
NC_011748.1	RefSeq	transcript	3281097	3281279	.	+	.	ID=rna135;Parent=gene3265;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 17158328%3B Product type n : RNA;Dbxref=GeneID:7149487;gbkey=misc_RNA;product=6S
NC_011748.1	RefSeq	exon	3281097	3281279	.	+	.	ID=id275;Parent=rna135;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 17158328%3B Product type n : RNA;Dbxref=GeneID:7149487;gbkey=misc_RNA;product=6S
NC_011748.1	RefSeq	gene	3281355	3281903	.	+	.	ID=gene3266;Name=ygfA;Dbxref=GeneID:7147717;gbkey=Gene;gene=ygfA;locus_tag=EC55989_3199
NC_011748.1	RefSeq	CDS	3281355	3281903	.	+	0	ID=cds3027;Name=YP_002404174.1;Parent=gene3266;Note=ygfA expression increases five to eight fold in Escherichia coli cells growing as biofilms%3B unknown function;Dbxref=Genbank:YP_002404174.1,GeneID:7147717;gbkey=CDS;product=ligase;protein_id=YP_002404174.1;transl_table=11
NC_011748.1	RefSeq	gene	3281929	3282079	.	+	.	ID=gene3267;Name=rygC;Dbxref=GeneID:7148842;gbkey=Gene;gene=rygC;locus_tag=EC55989_misc_RNA_71
NC_011748.1	RefSeq	transcript	3281929	3282079	.	+	.	ID=rna136;Parent=gene3267;Dbxref=GeneID:7148842;gbkey=misc_RNA;product=RygC
NC_011748.1	RefSeq	exon	3281929	3282079	.	+	.	ID=id276;Parent=rna136;Dbxref=GeneID:7148842;gbkey=misc_RNA;product=RygC
NC_011748.1	RefSeq	gene	3281929	3282077	.	+	.	ID=gene3268;Name=rygD;Dbxref=GeneID:7147586;gbkey=Gene;gene=rygD;locus_tag=EC55989_misc_RNA_70
NC_011748.1	RefSeq	transcript	3281929	3282077	.	+	.	ID=rna137;Parent=gene3268;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 11445539%3B Product type n : RNA;Dbxref=GeneID:7147586;gbkey=misc_RNA;product=RygD
NC_011748.1	RefSeq	exon	3281929	3282077	.	+	.	ID=id277;Parent=rna137;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 11445539%3B Product type n : RNA;Dbxref=GeneID:7147586;gbkey=misc_RNA;product=RygD
NC_011748.1	RefSeq	gene	3282684	3283916	.	-	.	ID=gene3269;Name=serA;Dbxref=GeneID:7147589;gbkey=Gene;gene=serA;locus_tag=EC55989_3200
NC_011748.1	RefSeq	CDS	3282684	3283916	.	-	0	ID=cds3028;Name=YP_002404175.1;Parent=gene3269;Note=catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis%3B can also reduce alpha ketoglutarate to form 2-hydroxyglutarate;Dbxref=Genbank:YP_002404175.1,GeneID:7147589;gbkey=CDS;product=D-3-phosphoglycerate dehydrogenase;protein_id=YP_002404175.1;transl_table=11
NC_011748.1	RefSeq	gene	3284172	3284831	.	-	.	ID=gene3270;Name=rpiA;Dbxref=GeneID:7147632;gbkey=Gene;gene=rpiA;locus_tag=EC55989_3202
NC_011748.1	RefSeq	CDS	3284172	3284831	.	-	0	ID=cds3029;Name=YP_002404176.1;Parent=gene3270;Note=Catalyzes D-ribose 5-phosphate --%3E D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway;Dbxref=Genbank:YP_002404176.1,GeneID:7147632;gbkey=CDS;product=ribose-5-phosphate isomerase A;protein_id=YP_002404176.1;transl_table=11
NC_011748.1	RefSeq	gene	3285214	3286107	.	+	.	ID=gene3271;Name=argP;Dbxref=GeneID:7147462;gbkey=Gene;gene=argP;locus_tag=EC55989_3203
NC_011748.1	RefSeq	CDS	3285214	3286107	.	+	0	ID=cds3030;Name=YP_002404177.1;Parent=gene3271;Note=specific inhibitor of chromosomal initiation of replication in vitro%3B binds the three 13-mers in the origin %28oriC%29 to block initiation of replication%3B also controls genes involved in arginine transport;Dbxref=Genbank:YP_002404177.1,GeneID:7147462;gbkey=CDS;product=chromosome replication initiation inhibitor protein;protein_id=YP_002404177.1;transl_table=11
NC_011748.1	RefSeq	gene	3286290	3287039	.	+	.	ID=gene3272;Name=yliK;Dbxref=GeneID:7145534;gbkey=Gene;gene=yliK;locus_tag=EC55989_3204;pseudo=true
NC_011748.1	RefSeq	region	3286290	3287039	.	+	.	ID=id278;Note=fragment of methylmalonyl-CoA mutase %28part 1%29%3BEvidence 7 : Gene remnant%3B Product type e : enzyme;Dbxref=GeneID:7145534;gbkey=misc_feature
NC_011748.1	RefSeq	gene	3287151	3288455	.	+	.	ID=gene3273;Name=yliK;Dbxref=GeneID:7149261;gbkey=Gene;gene=yliK;locus_tag=EC55989_3205;pseudo=true
NC_011748.1	RefSeq	region	3287151	3288455	.	+	.	ID=id279;Note=fragment of methylmalonyl-CoA mutase %28part 2%29%3BEvidence 7 : Gene remnant%3B Product type e : enzyme;Dbxref=GeneID:7149261;gbkey=misc_feature
NC_011748.1	RefSeq	gene	3288448	3289443	.	+	.	ID=gene3274;Name=argK;Dbxref=GeneID:7149262;gbkey=Gene;gene=argK;locus_tag=EC55989_3206
NC_011748.1	RefSeq	CDS	3288448	3289443	.	+	0	ID=cds3031;Name=YP_002404178.1;Parent=gene3274;Note=functions in transport of arginine%2Fornithine%3B inner membrane ATPase that cleaves ATP and phosphorylates two periplasmic proteins that function as two distinct transport systems%2C the AO %28arginine and ornithine%29 and LAO %28lysine%2C arginine%2C and ornithine%29 periplasmic binding proteins;Dbxref=Genbank:YP_002404178.1,GeneID:7149262;gbkey=CDS;product=arginine%2Fornithine transport system ATPase;protein_id=YP_002404178.1;transl_table=11
NC_011748.1	RefSeq	gene	3289454	3290239	.	+	.	ID=gene3275;Name=ygfG;Dbxref=GeneID:7145532;gbkey=Gene;gene=ygfG;locus_tag=EC55989_3207
NC_011748.1	RefSeq	CDS	3289454	3290239	.	+	0	ID=cds3032;Name=YP_002404179.1;Parent=gene3275;Note=catalyzes the formation of propanoyl-CoA from methylmalonyl-CoA;Dbxref=Genbank:YP_002404179.1,GeneID:7145532;gbkey=CDS;product=methylmalonyl-CoA decarboxylase;protein_id=YP_002404179.1;transl_table=11
NC_011748.1	RefSeq	gene	3290263	3291741	.	+	.	ID=gene3276;Name=ygfH;Dbxref=GeneID:7148845;gbkey=Gene;gene=ygfH;locus_tag=EC55989_3208
NC_011748.1	RefSeq	CDS	3290263	3291741	.	+	0	ID=cds3033;Name=YP_002404180.1;Parent=gene3276;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 20233703%3B Product type e : enzyme;Dbxref=Genbank:YP_002404180.1,GeneID:7148845;gbkey=CDS;product=propionyl-CoA:succinate-CoA transferase;protein_id=YP_002404180.1;transl_table=11
NC_011748.1	RefSeq	gene	3291738	3292634	.	-	.	ID=gene3277;Name=ygfI;Dbxref=GeneID:7148846;gbkey=Gene;gene=ygfI;locus_tag=EC55989_3209
NC_011748.1	RefSeq	CDS	3291738	3292634	.	-	0	ID=cds3034;Name=YP_002404181.1;Parent=gene3277;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pr :  regulator;Dbxref=Genbank:YP_002404181.1,GeneID:7148846;gbkey=CDS;product=DNA-binding transcriptional regulator;protein_id=YP_002404181.1;transl_table=11
NC_011748.1	RefSeq	gene	3292801	3293541	.	-	.	ID=gene3278;Name=yggE;Dbxref=GeneID:7148847;gbkey=Gene;gene=yggE;locus_tag=EC55989_3210
NC_011748.1	RefSeq	CDS	3292801	3293541	.	-	0	ID=cds3035;Name=YP_002404182.1;Parent=gene3278;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404182.1,GeneID:7148847;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404182.1;transl_table=11
NC_011748.1	RefSeq	gene	3293634	3294269	.	-	.	ID=gene3279;Name=argO;Dbxref=GeneID:7148861;gbkey=Gene;gene=argO;locus_tag=EC55989_3211
NC_011748.1	RefSeq	CDS	3293634	3294269	.	-	0	ID=cds3036;Name=YP_002404183.1;Parent=gene3279;Note=Involved in the export of arginine;Dbxref=Genbank:YP_002404183.1,GeneID:7148861;gbkey=CDS;product=arginine exporter protein;protein_id=YP_002404183.1;transl_table=11
NC_011748.1	RefSeq	gene	3294408	3295268	.	-	.	ID=gene3280;Name=mscS;Dbxref=GeneID:7145533;gbkey=Gene;gene=mscS;locus_tag=EC55989_3212
NC_011748.1	RefSeq	CDS	3294408	3295268	.	-	0	ID=cds3037;Name=YP_002404184.1;Parent=gene3280;Note=participates in the regulation of osmotic pressure changes within the cel;Dbxref=Genbank:YP_002404184.1,GeneID:7145533;gbkey=CDS;product=mechanosensitive channel MscS;protein_id=YP_002404184.1;transl_table=11
NC_011748.1	RefSeq	gene	3295626	3296705	.	-	.	ID=gene3281;Name=fbaA;Dbxref=GeneID:7146909;gbkey=Gene;gene=fbaA;locus_tag=EC55989_3213
NC_011748.1	RefSeq	CDS	3295626	3296705	.	-	0	ID=cds3038;Name=YP_002404185.1;Parent=gene3281;Note=catalyzes the formation of glycerone phosphate and glyceraldehyde 3-phosphate from fructose 1%2C6%2C bisphosphate;Dbxref=Genbank:YP_002404185.1,GeneID:7146909;gbkey=CDS;product=fructose-bisphosphate aldolase;protein_id=YP_002404185.1;transl_table=11
NC_011748.1	RefSeq	gene	3296920	3298083	.	-	.	ID=gene3282;Name=pgk;Dbxref=GeneID:7146062;gbkey=Gene;gene=pgk;locus_tag=EC55989_3214
NC_011748.1	RefSeq	CDS	3296920	3298083	.	-	0	ID=cds3039;Name=YP_002404186.1;Parent=gene3282;Note=Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway;Dbxref=Genbank:YP_002404186.1,GeneID:7146062;gbkey=CDS;product=phosphoglycerate kinase;protein_id=YP_002404186.1;transl_table=11
NC_011748.1	RefSeq	STS	3297195	3297350	.	+	.	ID=id280;Dbxref=UniSTS:154739;gbkey=STS
NC_011748.1	RefSeq	gene	3298133	3299152	.	-	.	ID=gene3283;Name=epd;Dbxref=GeneID:7147151;gbkey=Gene;gene=epd;locus_tag=EC55989_3215
NC_011748.1	RefSeq	CDS	3298133	3299152	.	-	0	ID=cds3040;Name=YP_002404187.1;Parent=gene3283;Note=NAD-dependent%3B catalyzes the formation of 4-phosphoerythronate from erythrose 4-phosphate in the biosynthesis of pyridoxine 5%27-phosphate;Dbxref=Genbank:YP_002404187.1,GeneID:7147151;gbkey=CDS;product=erythrose 4-phosphate dehydrogenase;protein_id=YP_002404187.1;transl_table=11
NC_011748.1	RefSeq	gene	3299524	3299955	.	+	.	ID=gene3284;Name=EC55989_3216;Dbxref=GeneID:7146011;gbkey=Gene;locus_tag=EC55989_3216
NC_011748.1	RefSeq	CDS	3299524	3299955	.	+	0	ID=cds3041;Name=YP_002404188.1;Parent=gene3284;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404188.1,GeneID:7146011;gbkey=CDS;product=DNA-binding protein;protein_id=YP_002404188.1;transl_table=11
NC_011748.1	RefSeq	gene	3299879	3300556	.	+	.	ID=gene3285;Name=EC55989_3217;Dbxref=GeneID:7144876;gbkey=Gene;locus_tag=EC55989_3217
NC_011748.1	RefSeq	CDS	3299879	3300556	.	+	0	ID=cds3042;Name=YP_002404189.1;Parent=gene3285;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002404189.1,GeneID:7144876;gbkey=CDS;product=ABC-type transport system;protein_id=YP_002404189.1;transl_table=11
NC_011748.1	RefSeq	gene	3300557	3301264	.	+	.	ID=gene3286;Name=EC55989_3218;Dbxref=GeneID:7144877;gbkey=Gene;locus_tag=EC55989_3218
NC_011748.1	RefSeq	CDS	3300557	3301264	.	+	0	ID=cds3043;Name=YP_002404190.1;Parent=gene3286;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002404190.1,GeneID:7144877;gbkey=CDS;product=ABC-type transport system;protein_id=YP_002404190.1;transl_table=11
NC_011748.1	RefSeq	gene	3301246	3301929	.	+	.	ID=gene3287;Name=EC55989_3219;Dbxref=GeneID:7144878;gbkey=Gene;locus_tag=EC55989_3219
NC_011748.1	RefSeq	CDS	3301246	3301929	.	+	0	ID=cds3044;Name=YP_002404191.1;Parent=gene3287;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002404191.1,GeneID:7144878;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=YP_002404191.1;transl_table=11
NC_011748.1	RefSeq	gene	3301890	3302600	.	+	.	ID=gene3288;Name=EC55989_3220;Dbxref=GeneID:7144879;gbkey=Gene;locus_tag=EC55989_3220
NC_011748.1	RefSeq	CDS	3301890	3302600	.	+	0	ID=cds3045;Name=YP_002404192.1;Parent=gene3288;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002404192.1,GeneID:7144879;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=YP_002404192.1;transl_table=11
NC_011748.1	RefSeq	gene	3302572	3303285	.	-	.	ID=gene3289;Name=frcK;Dbxref=GeneID:7144880;gbkey=Gene;gene=frcK;locus_tag=EC55989_3221
NC_011748.1	RefSeq	CDS	3302572	3303285	.	-	0	ID=cds3046;Name=YP_002404193.1;Parent=gene3289;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404193.1,GeneID:7144880;gbkey=CDS;product=fructose transport system kinase;protein_id=YP_002404193.1;transl_table=11
NC_011748.1	RefSeq	gene	3303282	3303791	.	-	.	ID=gene3290;Name=yggD;Dbxref=GeneID:7148859;gbkey=Gene;gene=yggD;locus_tag=EC55989_3222
NC_011748.1	RefSeq	CDS	3303282	3303791	.	-	0	ID=cds3047;Name=YP_002404194.1;Parent=gene3290;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pr :  regulator;Dbxref=Genbank:YP_002404194.1,GeneID:7148859;gbkey=CDS;product=DNA-binding transcriptional regulator;protein_id=YP_002404194.1;transl_table=11
NC_011748.1	RefSeq	gene	3303813	3304778	.	-	.	ID=gene3291;Name=yggF;Dbxref=GeneID:7148860;gbkey=Gene;gene=yggF;locus_tag=EC55989_3223
NC_011748.1	RefSeq	CDS	3303813	3304778	.	-	0	ID=cds3048;Name=YP_002404195.1;Parent=gene3291;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002404195.1,GeneID:7148860;gbkey=CDS;product=fructose-1%2C6-bisphosphatase II-like protein;protein_id=YP_002404195.1;transl_table=11
NC_011748.1	RefSeq	gene	3304775	3306052	.	-	.	ID=gene3292;Name=yggP;Dbxref=GeneID:7148862;gbkey=Gene;gene=yggP;locus_tag=EC55989_3224
NC_011748.1	RefSeq	CDS	3304775	3306052	.	-	0	ID=cds3049;Name=YP_002404196.1;Parent=gene3292;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002404196.1,GeneID:7148862;gbkey=CDS;product=dehydrogenase;protein_id=YP_002404196.1;transl_table=11
NC_011748.1	RefSeq	gene	3306067	3307455	.	-	.	ID=gene3293;Name=cmtA;Dbxref=GeneID:7148869;gbkey=Gene;gene=cmtA;locus_tag=EC55989_3225
NC_011748.1	RefSeq	CDS	3306067	3307455	.	-	0	ID=cds3050;Name=YP_002404197.1;Parent=gene3293;Note=Evidence 2b : Function of strongly homologous gene%3B PubMedId : 8353127%3B Product type t : transporter;Dbxref=Genbank:YP_002404197.1,GeneID:7148869;gbkey=CDS;product=fused mannitol-specific PTS enzymes: IIB component %3B IIC component;protein_id=YP_002404197.1;transl_table=11
NC_011748.1	RefSeq	gene	3307483	3307926	.	-	.	ID=gene3294;Name=cmtB;Dbxref=GeneID:7145730;gbkey=Gene;gene=cmtB;locus_tag=EC55989_3226
NC_011748.1	RefSeq	CDS	3307483	3307926	.	-	0	ID=cds3051;Name=YP_002404198.1;Parent=gene3294;Note=TolM%3B with CmtA %28IIBC%29%2C CmtB possibly forms the mannitol-like permease component of the cryptic mannitol phosphotransferase system%2C which phosphorylates and transports various carbohydrates and polyhydric alcohols in Escherichia coli%3B cytoplasmic protein;Dbxref=Genbank:YP_002404198.1,GeneID:7145730;gbkey=CDS;product=mannitol phosphotransferase subunit EIIA;protein_id=YP_002404198.1;transl_table=11
NC_011748.1	RefSeq	gene	3308240	3310231	.	-	.	ID=gene3295;Name=tktA;Dbxref=GeneID:7145731;gbkey=Gene;gene=tktA;locus_tag=EC55989_3227
NC_011748.1	RefSeq	CDS	3308240	3310231	.	-	0	ID=cds3052;Name=YP_002404199.1;Parent=gene3295;Note=catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate%3B can transfer ketol groups between several groups%3B in Escherichia coli there are two tkt genes%2C tktA expressed during exponential growth and the tktB during stationary phase;Dbxref=Genbank:YP_002404199.1,GeneID:7145731;gbkey=CDS;product=transketolase;protein_id=YP_002404199.1;transl_table=11
NC_011748.1	RefSeq	gene	3310509	3311267	.	+	.	ID=gene3296;Name=yggG;Dbxref=GeneID:7147804;gbkey=Gene;gene=yggG;locus_tag=EC55989_3228
NC_011748.1	RefSeq	CDS	3310509	3311267	.	+	0	ID=cds3053;Name=YP_002404200.1;Parent=gene3296;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 1310091%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002404200.1,GeneID:7147804;gbkey=CDS;product=peptidase;protein_id=YP_002404200.1;transl_table=11
NC_011748.1	RefSeq	gene	3311473	3312393	.	-	.	ID=gene3297;Name=speB;Dbxref=GeneID:7148863;gbkey=Gene;gene=speB;locus_tag=EC55989_3229
NC_011748.1	RefSeq	CDS	3311473	3312393	.	-	0	ID=cds3054;Name=YP_002404201.1;Parent=gene3297;Note=catalyzes the formation of putrescine from agmatine;Dbxref=Genbank:YP_002404201.1,GeneID:7148863;gbkey=CDS;product=agmatinase;protein_id=YP_002404201.1;transl_table=11
NC_011748.1	RefSeq	gene	3312529	3313260	.	-	.	ID=gene3298;Name=EC55989_3230;Dbxref=GeneID:7147686;gbkey=Gene;locus_tag=EC55989_3230
NC_011748.1	RefSeq	CDS	3312529	3313260	.	-	0	ID=cds3055;Name=YP_002404202.1;Parent=gene3298;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404202.1,GeneID:7147686;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404202.1;transl_table=11
NC_011748.1	RefSeq	gene	3313406	3315382	.	-	.	ID=gene3299;Name=speA;Dbxref=GeneID:7144881;gbkey=Gene;gene=speA;locus_tag=EC55989_3231
NC_011748.1	RefSeq	CDS	3313406	3315382	.	-	0	ID=cds3056;Name=YP_002404203.1;Parent=gene3299;Note=catalyzes the formation of agmatine from arginine in putrescine and spermidine biosynthesis;Dbxref=Genbank:YP_002404203.1,GeneID:7144881;gbkey=CDS;product=arginine decarboxylase;protein_id=YP_002404203.1;transl_table=11
NC_011748.1	RefSeq	gene	3315391	3315537	.	-	.	ID=gene3300;Name=yqgB;Dbxref=GeneID:7147685;gbkey=Gene;gene=yqgB;locus_tag=EC55989_3232
NC_011748.1	RefSeq	CDS	3315391	3315537	.	-	0	ID=cds3057;Name=YP_002404204.1;Parent=gene3300;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404204.1,GeneID:7147685;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404204.1;transl_table=11
NC_011748.1	RefSeq	gene	3315658	3315873	.	+	.	ID=gene3301;Name=yqgC;Dbxref=GeneID:7149408;gbkey=Gene;gene=yqgC;locus_tag=EC55989_3233
NC_011748.1	RefSeq	CDS	3315658	3315873	.	+	0	ID=cds3058;Name=YP_002404205.1;Parent=gene3301;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404205.1,GeneID:7149408;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404205.1;transl_table=11
NC_011748.1	RefSeq	gene	3315870	3316121	.	-	.	ID=gene3302;Name=yqgD;Dbxref=GeneID:7149409;gbkey=Gene;gene=yqgD;locus_tag=EC55989_3234
NC_011748.1	RefSeq	CDS	3315870	3316121	.	-	0	ID=cds3059;Name=YP_002404206.1;Parent=gene3302;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002404206.1,GeneID:7149409;gbkey=CDS;product=inner membrane protein;protein_id=YP_002404206.1;transl_table=11
NC_011748.1	RefSeq	gene	3316177	3317331	.	+	.	ID=gene3303;Name=metK;Dbxref=GeneID:7149410;gbkey=Gene;gene=metK;locus_tag=EC55989_3235
NC_011748.1	RefSeq	CDS	3316177	3317331	.	+	0	ID=cds3060;Name=YP_002404207.1;Parent=gene3303;Note=catalyzes the formation of S-adenosylmethionine from methionine and ATP%3B methionine adenosyltransferase;Dbxref=Genbank:YP_002404207.1,GeneID:7149410;gbkey=CDS;product=S-adenosylmethionine synthetase;protein_id=YP_002404207.1;transl_table=11
NC_011748.1	RefSeq	gene	3317767	3319161	.	+	.	ID=gene3304;Name=galP;Dbxref=GeneID:7146833;gbkey=Gene;gene=galP;locus_tag=EC55989_3236
NC_011748.1	RefSeq	CDS	3317767	3319161	.	+	0	ID=cds3061;Name=YP_002404208.1;Parent=gene3304;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 9182541%3B Product type t : transporter;Dbxref=Genbank:YP_002404208.1,GeneID:7146833;gbkey=CDS;product=D-galactose transporter;protein_id=YP_002404208.1;transl_table=11
NC_011748.1	RefSeq	gene	3319238	3319735	.	+	.	ID=gene3305;Name=sprT;Dbxref=GeneID:7146251;gbkey=Gene;gene=sprT;locus_tag=EC55989_3237
NC_011748.1	RefSeq	CDS	3319238	3319735	.	+	0	ID=cds3062;Name=YP_002404209.1;Parent=gene3305;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 7984428%2C 8113204;Dbxref=Genbank:YP_002404209.1,GeneID:7146251;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404209.1;transl_table=11
NC_011748.1	RefSeq	gene	3319830	3320537	.	+	.	ID=gene3306;Name=endA;Dbxref=GeneID:7147696;gbkey=Gene;gene=endA;locus_tag=EC55989_3238
NC_011748.1	RefSeq	CDS	3319830	3320537	.	+	0	ID=cds3063;Name=YP_002404210.1;Parent=gene3306;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 72060411%2C 92335461%2C 4955462%2C 7867949%2C 8113204%3B Product type e : enzyme;Dbxref=Genbank:YP_002404210.1,GeneID:7147696;gbkey=CDS;product=DNA-specific endonuclease I;protein_id=YP_002404210.1;transl_table=11
NC_011748.1	RefSeq	gene	3320617	3321348	.	+	.	ID=gene3307;Name=yggJ;Dbxref=GeneID:7145997;gbkey=Gene;gene=yggJ;locus_tag=EC55989_3239
NC_011748.1	RefSeq	CDS	3320617	3321348	.	+	0	ID=cds3064;Name=YP_002404211.1;Parent=gene3307;Note=in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA%3B cells lacking this function can grow%2C but are outcompeted by wild-type%3B SAM-dependent m%283%29U1498 methyltransferase;Dbxref=Genbank:YP_002404211.1,GeneID:7145997;gbkey=CDS;product=16S ribosomal RNA methyltransferase RsmE;protein_id=YP_002404211.1;transl_table=11
NC_011748.1	RefSeq	gene	3321361	3322311	.	+	.	ID=gene3308;Name=gshB;Dbxref=GeneID:7148865;gbkey=Gene;gene=gshB;locus_tag=EC55989_3240
NC_011748.1	RefSeq	CDS	3321361	3322311	.	+	0	ID=cds3065;Name=YP_002404212.1;Parent=gene3308;Note=catalyzes the second step in the glutathione biosynthesis pathway%2C where it synthesizes ATP %2B gamma-L-glutamyl-L-cysteine %2B glycine %3D ADP %2B phosphate %2B glutathione;Dbxref=Genbank:YP_002404212.1,GeneID:7148865;gbkey=CDS;product=glutathione synthetase;protein_id=YP_002404212.1;transl_table=11
NC_011748.1	RefSeq	gene	3322420	3322983	.	+	.	ID=gene3309;Name=yqgE;Dbxref=GeneID:7146374;gbkey=Gene;gene=yqgE;locus_tag=EC55989_3241
NC_011748.1	RefSeq	CDS	3322420	3322983	.	+	0	ID=cds3066;Name=YP_002404213.1;Parent=gene3309;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404213.1,GeneID:7146374;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404213.1;transl_table=11
NC_011748.1	RefSeq	gene	3322983	3323399	.	+	.	ID=gene3310;Name=yqgF;Dbxref=GeneID:7149411;gbkey=Gene;gene=yqgF;locus_tag=EC55989_3242
NC_011748.1	RefSeq	CDS	3322983	3323399	.	+	0	ID=cds3067;Name=YP_002404214.1;Parent=gene3310;Note=similar to RuvC resolvase with substantial differences%3B NMR structural information suggests this protein is monomeric%3B unknown cellular function;Dbxref=Genbank:YP_002404214.1,GeneID:7149411;gbkey=CDS;product=Holliday junction resolvase-like protein;protein_id=YP_002404214.1;transl_table=11
NC_011748.1	RefSeq	gene	3323575	3324555	.	-	.	ID=gene3311;Name=yggR;Dbxref=GeneID:7149412;gbkey=Gene;gene=yggR;locus_tag=EC55989_3243
NC_011748.1	RefSeq	CDS	3323575	3324555	.	-	0	ID=cds3068;Name=YP_002404215.1;Parent=gene3311;Note=Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism%3B PubMedId : 1676385%3B Product type t : transporter;Dbxref=Genbank:YP_002404215.1,GeneID:7149412;gbkey=CDS;product=transporter;protein_id=YP_002404215.1;transl_table=11
NC_011748.1	RefSeq	gene	3324573	3325277	.	+	.	ID=gene3312;Name=yggS;Dbxref=GeneID:7148870;gbkey=Gene;gene=yggS;locus_tag=EC55989_3244
NC_011748.1	RefSeq	CDS	3324573	3325277	.	+	0	ID=cds3069;Name=YP_002404216.1;Parent=gene3312;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002404216.1,GeneID:7148870;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404216.1;transl_table=11
NC_011748.1	RefSeq	gene	3325295	3325861	.	+	.	ID=gene3313;Name=yggT;Dbxref=GeneID:7148871;gbkey=Gene;gene=yggT;locus_tag=EC55989_3245
NC_011748.1	RefSeq	CDS	3325295	3325861	.	+	0	ID=cds3070;Name=YP_002404217.1;Parent=gene3313;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002404217.1,GeneID:7148871;gbkey=CDS;product=inner membrane protein;protein_id=YP_002404217.1;transl_table=11
NC_011748.1	RefSeq	gene	3325858	3326148	.	+	.	ID=gene3314;Name=yggU;Dbxref=GeneID:7148872;gbkey=Gene;gene=yggU;locus_tag=EC55989_3246
NC_011748.1	RefSeq	CDS	3325858	3326148	.	+	0	ID=cds3071;Name=YP_002404218.1;Parent=gene3314;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 12975589;Dbxref=Genbank:YP_002404218.1,GeneID:7148872;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404218.1;transl_table=11
NC_011748.1	RefSeq	gene	3326156	3326749	.	+	.	ID=gene3315;Name=yggV;Dbxref=GeneID:7148873;gbkey=Gene;gene=yggV;locus_tag=EC55989_3247
NC_011748.1	RefSeq	CDS	3326156	3326749	.	+	0	ID=cds3072;Name=YP_002404219.1;Parent=gene3315;Note=HAM1-like protein%3B Rec-dependent growth%3B RgdB%3B yggV%3B it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine;Dbxref=Genbank:YP_002404219.1,GeneID:7148873;gbkey=CDS;product=deoxyribonucleotide triphosphate pyrophosphatase;protein_id=YP_002404219.1;transl_table=11
NC_011748.1	RefSeq	gene	3326742	3327878	.	+	.	ID=gene3316;Name=yggW;Dbxref=GeneID:7148874;gbkey=Gene;gene=yggW;locus_tag=EC55989_3248
NC_011748.1	RefSeq	CDS	3326742	3327878	.	+	0	ID=cds3073;Name=YP_002404220.1;Parent=gene3316;Note=catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III;Dbxref=Genbank:YP_002404220.1,GeneID:7148874;gbkey=CDS;product=coproporphyrinogen III oxidase;protein_id=YP_002404220.1;transl_table=11
NC_011748.1	RefSeq	gene	3328033	3329040	.	-	.	ID=gene3317;Name=yggM;Dbxref=GeneID:7148875;gbkey=Gene;gene=yggM;locus_tag=EC55989_3249
NC_011748.1	RefSeq	CDS	3328033	3329040	.	-	0	ID=cds3074;Name=YP_002404221.1;Parent=gene3317;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404221.1,GeneID:7148875;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404221.1;transl_table=11
NC_011748.1	RefSeq	gene	3329157	3330203	.	-	.	ID=gene3318;Name=ansB;Dbxref=GeneID:7148867;gbkey=Gene;gene=ansB;locus_tag=EC55989_3250
NC_011748.1	RefSeq	CDS	3329157	3330203	.	-	0	ID=cds3075;Name=YP_002404222.1;Parent=gene3318;Note=catalyzes the formation of aspartate from asparagine%2C periplasmic%3B regulated by cyclic AMP receptor protein %28CRP%29 and also induced by anaerobiosis;Dbxref=Genbank:YP_002404222.1,GeneID:7148867;gbkey=CDS;product=L-asparaginase II;protein_id=YP_002404222.1;transl_table=11
NC_011748.1	RefSeq	gene	3330379	3331098	.	-	.	ID=gene3319;Name=yggN;Dbxref=GeneID:7145503;gbkey=Gene;gene=yggN;locus_tag=EC55989_3251
NC_011748.1	RefSeq	CDS	3330379	3331098	.	-	0	ID=cds3076;Name=YP_002404223.1;Parent=gene3319;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 11274153;Dbxref=Genbank:YP_002404223.1,GeneID:7145503;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404223.1;transl_table=11
NC_011748.1	RefSeq	gene	3331282	3331608	.	-	.	ID=gene3320;Name=yggL;Dbxref=GeneID:7148868;gbkey=Gene;gene=yggL;locus_tag=EC55989_3252
NC_011748.1	RefSeq	CDS	3331282	3331608	.	-	0	ID=cds3077;Name=YP_002404224.1;Parent=gene3320;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404224.1,GeneID:7148868;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404224.1;transl_table=11
NC_011748.1	RefSeq	gene	3331608	3332327	.	-	.	ID=gene3321;Name=trmB;Dbxref=GeneID:7148866;gbkey=Gene;gene=trmB;locus_tag=EC55989_3253
NC_011748.1	RefSeq	CDS	3331608	3332327	.	-	0	ID=cds3078;Name=YP_002404225.1;Parent=gene3321;Note=tRNA %28guanine-N%287%29-%29-methyltransferase%3B catalyzes the formation of N%287%29-methylguanine at position 46 %28m7G46%29 in tRNA by transferring the methyl residue from S-adenosyl-L-methionine;Dbxref=Genbank:YP_002404225.1,GeneID:7148866;gbkey=CDS;product=tRNA %28guanine-N%287%29-%29-methyltransferase;protein_id=YP_002404225.1;transl_table=11
NC_011748.1	RefSeq	gene	3332488	3333540	.	+	.	ID=gene3322;Name=mutY;Dbxref=GeneID:7148864;gbkey=Gene;gene=mutY;locus_tag=EC55989_3254
NC_011748.1	RefSeq	CDS	3332488	3333540	.	+	0	ID=cds3079;Name=YP_002404226.1;Parent=gene3322;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 14730969%2C 20187555%2C 20316830%2C 20580749%2C 21438845%2C 90046892%2C 92409600%2C 9801309%2C 2001994%2C 2197596%2C 9846876%3B Product type e : enzyme;Dbxref=Genbank:YP_002404226.1,GeneID:7148864;gbkey=CDS;product=adenine DNA glycosylase;protein_id=YP_002404226.1;transl_table=11
NC_011748.1	RefSeq	gene	3333568	3333843	.	+	.	ID=gene3323;Name=yggX;Dbxref=GeneID:7146936;gbkey=Gene;gene=yggX;locus_tag=EC55989_3255
NC_011748.1	RefSeq	CDS	3333568	3333843	.	+	0	ID=cds3080;Name=YP_002404227.1;Parent=gene3323;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 14594836%2C 10493123%2C 9298646%2C 9868784%3B Product type f : factor;Dbxref=Genbank:YP_002404227.1,GeneID:7146936;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404227.1;transl_table=11
NC_011748.1	RefSeq	gene	3333908	3334987	.	+	.	ID=gene3324;Name=mltC;Dbxref=GeneID:7148876;gbkey=Gene;gene=mltC;locus_tag=EC55989_3256
NC_011748.1	RefSeq	CDS	3333908	3334987	.	+	0	ID=cds3081;Name=YP_002404228.1;Parent=gene3324;Note=Murein hydrolase C%3B membrane-bound%3B lytic%3B catalyzes the cleavage of the beta-1%2C4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues;Dbxref=Genbank:YP_002404228.1,GeneID:7148876;gbkey=CDS;product=murein transglycosylase C;protein_id=YP_002404228.1;transl_table=11
NC_011748.1	RefSeq	gene	3335189	3336445	.	+	.	ID=gene3325;Name=nupG;Dbxref=GeneID:7146865;gbkey=Gene;gene=nupG;locus_tag=EC55989_3257
NC_011748.1	RefSeq	CDS	3335189	3336445	.	+	0	ID=cds3082;Name=YP_002404229.1;Parent=gene3325;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 88029453%2C 90323001%2C 3311747%3B Product type t : transporter;Dbxref=Genbank:YP_002404229.1,GeneID:7146865;gbkey=CDS;product=nucleoside transporter;protein_id=YP_002404229.1;transl_table=11
NC_011748.1	RefSeq	gene	3336495	3338630	.	-	.	ID=gene3326;Name=speC;Dbxref=GeneID:7147057;gbkey=Gene;gene=speC;locus_tag=EC55989_3258
NC_011748.1	RefSeq	CDS	3336495	3338630	.	-	0	ID=cds3083;Name=YP_002404230.1;Parent=gene3326;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 87222180%2C 87260820%3B Product type e : enzyme;Dbxref=Genbank:YP_002404230.1,GeneID:7147057;gbkey=CDS;product=ornithine decarboxylase;protein_id=YP_002404230.1;transl_table=11
NC_011748.1	RefSeq	gene	3339028	3339735	.	+	.	ID=gene3327;Name=yqgA;Dbxref=GeneID:7147687;gbkey=Gene;gene=yqgA;locus_tag=EC55989_3259
NC_011748.1	RefSeq	CDS	3339028	3339735	.	+	0	ID=cds3084;Name=YP_002404231.1;Parent=gene3327;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002404231.1,GeneID:7147687;gbkey=CDS;product=inner membrane protein;protein_id=YP_002404231.1;transl_table=11
NC_011748.1	RefSeq	gene	3339841	3339916	.	+	.	ID=gene3328;Name=EC55989_tRNA34;Dbxref=GeneID:7149407;gbkey=Gene;locus_tag=EC55989_tRNA34
NC_011748.1	RefSeq	tRNA	3339841	3339916	.	+	.	ID=rna138;Dbxref=GeneID:7149407;gbkey=tRNA;product=tRNA-Phe
NC_011748.1	RefSeq	exon	3339841	3339916	.	+	.	ID=id281;Parent=rna138;Dbxref=GeneID:7149407;gbkey=tRNA;product=tRNA-Phe
NC_011748.1	RefSeq	gene	3340114	3341376	.	+	.	ID=gene3329;Name=int;Dbxref=GeneID:7145344;gbkey=Gene;gene=int;locus_tag=EC55989_3260
NC_011748.1	RefSeq	CDS	3340114	3341376	.	+	0	ID=cds3085;Name=YP_002404232.1;Parent=gene3329;Note=Evidence 2b : Function of strongly homologous gene%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002404232.1,GeneID:7145344;gbkey=CDS;product=Prophage integrase;protein_id=YP_002404232.1;transl_table=11
NC_011748.1	RefSeq	gene	3341854	3342117	.	+	.	ID=gene3330;Name=EC55989_3261;Dbxref=GeneID:7146605;gbkey=Gene;locus_tag=EC55989_3261
NC_011748.1	RefSeq	CDS	3341854	3342117	.	+	0	ID=cds3086;Name=YP_002404233.1;Parent=gene3330;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404233.1,GeneID:7146605;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404233.1;transl_table=11
NC_011748.1	RefSeq	gene	3342200	3342513	.	-	.	ID=gene3331;Name=RNAII;Dbxref=GeneID:7144882;gbkey=Gene;gene=RNAII;locus_tag=EC55989_misc_RNA_72
NC_011748.1	RefSeq	transcript	3342200	3342513	.	-	.	ID=rna139;Parent=gene3331;Note=Evidence 1c : Function experimentally demonstrated in the studied genus%3B PubMedId : 1712252%3B Product type n : RNA;Dbxref=GeneID:7144882;gbkey=misc_RNA;product=RNAII
NC_011748.1	RefSeq	exon	3342200	3342513	.	-	.	ID=id282;Parent=rna139;Note=Evidence 1c : Function experimentally demonstrated in the studied genus%3B PubMedId : 1712252%3B Product type n : RNA;Dbxref=GeneID:7144882;gbkey=misc_RNA;product=RNAII
NC_011748.1	RefSeq	gene	3342583	3343176	.	-	.	ID=gene3332;Name=EC55989_3262;Dbxref=GeneID:7147436;gbkey=Gene;locus_tag=EC55989_3262
NC_011748.1	RefSeq	CDS	3342583	3343176	.	-	0	ID=cds3087;Name=YP_002404234.1;Parent=gene3332;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404234.1,GeneID:7147436;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404234.1;transl_table=11
NC_011748.1	RefSeq	gene	3343104	3343373	.	-	.	ID=gene3333;Name=EC55989_3263;Dbxref=GeneID:7144883;gbkey=Gene;locus_tag=EC55989_3263
NC_011748.1	RefSeq	CDS	3343104	3343373	.	-	0	ID=cds3088;Name=YP_002404235.1;Parent=gene3333;Note=Evidence 5 : No homology to any previously reported sequences;Dbxref=Genbank:YP_002404235.1,GeneID:7144883;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404235.1;transl_table=11
NC_011748.1	RefSeq	gene	3343569	3346436	.	+	.	ID=gene3334;Name=EC55989_3265;Dbxref=GeneID:7144884;gbkey=Gene;locus_tag=EC55989_3265
NC_011748.1	RefSeq	CDS	3343569	3346436	.	+	0	ID=cds3089;Name=YP_002404236.1;Parent=gene3334;Note=Evidence 2b : Function of strongly homologous gene%3B Product type e : enzyme;Dbxref=Genbank:YP_002404236.1,GeneID:7144884;gbkey=CDS;product=Helicase;protein_id=YP_002404236.1;transl_table=11
NC_011748.1	RefSeq	gene	3346438	3347442	.	+	.	ID=gene3335;Name=EC55989_3266;Dbxref=GeneID:7144885;gbkey=Gene;locus_tag=EC55989_3266
NC_011748.1	RefSeq	CDS	3346438	3347442	.	+	0	ID=cds3090;Name=YP_002404237.1;Parent=gene3335;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404237.1,GeneID:7144885;gbkey=CDS;product=ATPase;protein_id=YP_002404237.1;transl_table=11
NC_011748.1	RefSeq	gene	3347452	3349839	.	+	.	ID=gene3336;Name=EC55989_3267;Dbxref=GeneID:7144886;gbkey=Gene;locus_tag=EC55989_3267
NC_011748.1	RefSeq	CDS	3347452	3349839	.	+	0	ID=cds3091;Name=YP_002404238.1;Parent=gene3336;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404238.1,GeneID:7144886;gbkey=CDS;product=serine protease;protein_id=YP_002404238.1;transl_table=11
NC_011748.1	RefSeq	gene	3349849	3351477	.	+	.	ID=gene3337;Name=EC55989_3268;Dbxref=GeneID:7144887;gbkey=Gene;locus_tag=EC55989_3268
NC_011748.1	RefSeq	CDS	3349849	3351477	.	+	0	ID=cds3092;Name=YP_002404239.1;Parent=gene3337;Note=Evidence 2b : Function of strongly homologous gene%3B Product type e : enzyme;Dbxref=Genbank:YP_002404239.1,GeneID:7144887;gbkey=CDS;product=DNA methylase N-4%2FN-6;protein_id=YP_002404239.1;transl_table=11
NC_011748.1	RefSeq	gene	3351480	3354350	.	+	.	ID=gene3338;Name=EC55989_3269;Dbxref=GeneID:7144888;gbkey=Gene;locus_tag=EC55989_3269
NC_011748.1	RefSeq	CDS	3351480	3354350	.	+	0	ID=cds3093;Name=YP_002404240.1;Parent=gene3338;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002404240.1,GeneID:7144888;gbkey=CDS;product=PstII restriction-modification enzyme Res subunit;protein_id=YP_002404240.1;transl_table=11
NC_011748.1	RefSeq	gene	3354439	3354732	.	+	.	ID=gene3339;Name=EC55989_3270;Dbxref=GeneID:7144889;gbkey=Gene;locus_tag=EC55989_3270
NC_011748.1	RefSeq	CDS	3354439	3354732	.	+	0	ID=cds3094;Name=YP_002404241.1;Parent=gene3339;Note=Evidence 5 : No homology to any previously reported sequences;Dbxref=Genbank:YP_002404241.1,GeneID:7144889;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404241.1;transl_table=11
NC_011748.1	RefSeq	gene	3354766	3355152	.	+	.	ID=gene3340;Name=EC55989_3271;Dbxref=GeneID:7144890;gbkey=Gene;locus_tag=EC55989_3271
NC_011748.1	RefSeq	CDS	3354766	3355152	.	+	0	ID=cds3095;Name=YP_002404242.1;Parent=gene3340;Note=Evidence 2b : Function of strongly homologous gene%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002404242.1,GeneID:7144890;gbkey=CDS;product=transposase ORF A%2C IS3 family;protein_id=YP_002404242.1;transl_table=11
NC_011748.1	RefSeq	gene	3355072	3356223	.	-	.	ID=gene3341;Name=insI;Dbxref=GeneID:7144891;gbkey=Gene;gene=insI;locus_tag=EC55989_3272
NC_011748.1	RefSeq	CDS	3355072	3356223	.	-	0	ID=cds3096;Name=YP_002404243.1;Parent=gene3341;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 9689094%2C 6092059%3B Product type e : enzyme;Dbxref=Genbank:YP_002404243.1,GeneID:7144891;gbkey=CDS;product=IS30 transposase%3B KpLE2 phage-like element;protein_id=YP_002404243.1;transl_table=11
NC_011748.1	RefSeq	gene	3355676	3355720	.	+	.	ID=gene3342;Name=RNAC;Dbxref=GeneID:7146597;gbkey=Gene;gene=RNAC;locus_tag=EC55989_misc_RNA_73
NC_011748.1	RefSeq	transcript	3355676	3355720	.	+	.	ID=rna140;Parent=gene3342;Note=Evidence 1c : Function experimentally demonstrated in the studied genus%3B PubMedId : 9461341%3B Product type n : RNA;Dbxref=GeneID:7146597;gbkey=misc_RNA;product=RNAC
NC_011748.1	RefSeq	exon	3355676	3355720	.	+	.	ID=id283;Parent=rna140;Note=Evidence 1c : Function experimentally demonstrated in the studied genus%3B PubMedId : 9461341%3B Product type n : RNA;Dbxref=GeneID:7146597;gbkey=misc_RNA;product=RNAC
NC_011748.1	RefSeq	gene	3356354	3357505	.	+	.	ID=gene3343;Name=EC55989_3273;Dbxref=GeneID:7147435;gbkey=Gene;locus_tag=EC55989_3273
NC_011748.1	RefSeq	CDS	3356354	3357505	.	+	0	ID=cds3097;Name=YP_002404244.1;Parent=gene3343;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002404244.1,GeneID:7147435;gbkey=CDS;product=transposase;protein_id=YP_002404244.1;transl_table=11
NC_011748.1	RefSeq	gene	3357615	3359183	.	-	.	ID=gene3344;Name=EC55989_3274;Dbxref=GeneID:7144892;gbkey=Gene;locus_tag=EC55989_3274
NC_011748.1	RefSeq	CDS	3357615	3359183	.	-	0	ID=cds3098;Name=YP_002404245.1;Parent=gene3344;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404245.1,GeneID:7144892;gbkey=CDS;product=transposase ORF1%2C IS66 family;protein_id=YP_002404245.1;transl_table=11
NC_011748.1	RefSeq	gene	3359214	3359564	.	-	.	ID=gene3345;Name=EC55989_3275;Dbxref=GeneID:7144893;gbkey=Gene;locus_tag=EC55989_3275
NC_011748.1	RefSeq	CDS	3359214	3359564	.	-	0	ID=cds3099;Name=YP_002404246.1;Parent=gene3345;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404246.1,GeneID:7144893;gbkey=CDS;product=transposase ORF2%2C IS66 family;protein_id=YP_002404246.1;transl_table=11
NC_011748.1	RefSeq	gene	3359561	3359998	.	-	.	ID=gene3346;Name=EC55989_3276;Dbxref=GeneID:7144894;gbkey=Gene;locus_tag=EC55989_3276
NC_011748.1	RefSeq	CDS	3359561	3359998	.	-	0	ID=cds3100;Name=YP_002404247.1;Parent=gene3346;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404247.1,GeneID:7144894;gbkey=CDS;product=transposase;protein_id=YP_002404247.1;transl_table=11
NC_011748.1	RefSeq	gene	3360050	3360535	.	+	.	ID=gene3347;Name=EC55989_3277;Dbxref=GeneID:7144895;gbkey=Gene;locus_tag=EC55989_3277;pseudo=true
NC_011748.1	RefSeq	region	3360050	3360535	.	+	.	ID=id284;Note=fragment of   transposase %28partial%29%3BEvidence 7 : Gene remnant;Dbxref=GeneID:7144895;gbkey=misc_feature
NC_011748.1	RefSeq	gene	3360598	3360816	.	+	.	ID=gene3348;Name=EC55989_3278;Dbxref=GeneID:7144896;gbkey=Gene;locus_tag=EC55989_3278
NC_011748.1	RefSeq	CDS	3360598	3360816	.	+	0	ID=cds3101;Name=YP_002404248.1;Parent=gene3348;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404248.1,GeneID:7144896;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404248.1;transl_table=11
NC_011748.1	RefSeq	gene	3360967	3365085	.	-	.	ID=gene3349;Name=EC55989_3279;Dbxref=GeneID:7144897;gbkey=Gene;locus_tag=EC55989_3279
NC_011748.1	RefSeq	CDS	3360967	3365085	.	-	0	ID=cds3102;Name=YP_002404249.1;Parent=gene3349;Note=Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism%3B Product type e : enzyme;Dbxref=Genbank:YP_002404249.1,GeneID:7144897;gbkey=CDS;product=Serine protease pic precursor %28ShMu%29;protein_id=YP_002404249.1;transl_table=11
NC_011748.1	RefSeq	gene	3365547	3365963	.	-	.	ID=gene3350;Name=EC55989_3280;Dbxref=GeneID:7144898;gbkey=Gene;locus_tag=EC55989_3280;pseudo=true
NC_011748.1	RefSeq	region	3365547	3365963	.	-	.	ID=id285;Note=fragment of transposase ORF B%2C IS911 %28partial%29%3BEvidence 7 : Gene remnant%3B Product type pe :  enzyme;Dbxref=GeneID:7144898;gbkey=misc_feature
NC_011748.1	RefSeq	gene	3366026	3366112	.	-	.	ID=gene3351;Name=EC55989_misc_RNA_74;Dbxref=GeneID:7144899;gbkey=Gene;locus_tag=EC55989_misc_RNA_74
NC_011748.1	RefSeq	transcript	3366026	3366112	.	-	.	ID=rna141;Parent=gene3351;Dbxref=GeneID:7144899;gbkey=misc_RNA;product=Intron_gpII
NC_011748.1	RefSeq	exon	3366026	3366112	.	-	.	ID=id286;Parent=rna141;Dbxref=GeneID:7144899;gbkey=misc_RNA;product=Intron_gpII
NC_011748.1	RefSeq	gene	3366116	3367639	.	-	.	ID=gene3352;Name=EC55989_3281;Dbxref=GeneID:7145310;gbkey=Gene;locus_tag=EC55989_3281
NC_011748.1	RefSeq	CDS	3366116	3367639	.	-	0	ID=cds3103;Name=YP_002404250.1;Parent=gene3352;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002404250.1,GeneID:7145310;gbkey=CDS;product=reverse transcriptase-like protein from prophage or plasmid;protein_id=YP_002404250.1;transl_table=11
NC_011748.1	RefSeq	gene	3368231	3368803	.	-	.	ID=gene3353;Name=EC55989_3282;Dbxref=GeneID:7144900;gbkey=Gene;locus_tag=EC55989_3282
NC_011748.1	RefSeq	CDS	3368231	3368803	.	-	0	ID=cds3104;Name=YP_002404251.1;Parent=gene3353;Note=Evidence 7 : Gene remnant%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002404251.1,GeneID:7144900;gbkey=CDS;product=transposase ORF B %28fragment%29%2C IS629;protein_id=YP_002404251.1;transl_table=11
NC_011748.1	RefSeq	gene	3369231	3371780	.	-	.	ID=gene3354;Name=EC55989_3283;Dbxref=GeneID:7144901;gbkey=Gene;locus_tag=EC55989_3283
NC_011748.1	RefSeq	CDS	3369231	3371780	.	-	0	ID=cds3105;Name=YP_002404252.1;Parent=gene3354;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404252.1,GeneID:7144901;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404252.1;transl_table=11
NC_011748.1	RefSeq	gene	3371784	3375197	.	-	.	ID=gene3355;Name=EC55989_3284;Dbxref=GeneID:7144902;gbkey=Gene;locus_tag=EC55989_3284
NC_011748.1	RefSeq	CDS	3371784	3375197	.	-	0	ID=cds3106;Name=YP_002404253.1;Parent=gene3355;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404253.1,GeneID:7144902;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404253.1;transl_table=11
NC_011748.1	RefSeq	gene	3375194	3375796	.	-	.	ID=gene3356;Name=EC55989_3285;Dbxref=GeneID:7144903;gbkey=Gene;locus_tag=EC55989_3285
NC_011748.1	RefSeq	CDS	3375194	3375796	.	-	0	ID=cds3107;Name=YP_002404254.1;Parent=gene3356;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404254.1,GeneID:7144903;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404254.1;transl_table=11
NC_011748.1	RefSeq	gene	3375781	3376095	.	-	.	ID=gene3357;Name=EC55989_3286;Dbxref=GeneID:7144904;gbkey=Gene;locus_tag=EC55989_3286
NC_011748.1	RefSeq	CDS	3375781	3376095	.	-	0	ID=cds3108;Name=YP_002404255.1;Parent=gene3357;Note=Evidence 5 : No homology to any previously reported sequences;Dbxref=Genbank:YP_002404255.1,GeneID:7144904;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404255.1;transl_table=11
NC_011748.1	RefSeq	gene	3376123	3377553	.	-	.	ID=gene3358;Name=EC55989_3287;Dbxref=GeneID:7144905;gbkey=Gene;locus_tag=EC55989_3287
NC_011748.1	RefSeq	CDS	3376123	3377553	.	-	0	ID=cds3109;Name=YP_002404256.1;Parent=gene3358;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404256.1,GeneID:7144905;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404256.1;transl_table=11
NC_011748.1	RefSeq	gene	3377554	3378108	.	-	.	ID=gene3359;Name=EC55989_3288;Dbxref=GeneID:7144906;gbkey=Gene;locus_tag=EC55989_3288
NC_011748.1	RefSeq	CDS	3377554	3378108	.	-	0	ID=cds3110;Name=YP_002404257.1;Parent=gene3359;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404257.1,GeneID:7144906;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404257.1;transl_table=11
NC_011748.1	RefSeq	gene	3378113	3379189	.	-	.	ID=gene3360;Name=EC55989_3289;Dbxref=GeneID:7144907;gbkey=Gene;locus_tag=EC55989_3289
NC_011748.1	RefSeq	CDS	3378113	3379189	.	-	0	ID=cds3111;Name=YP_002404258.1;Parent=gene3360;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404258.1,GeneID:7144907;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404258.1;transl_table=11
NC_011748.1	RefSeq	gene	3379193	3379498	.	-	.	ID=gene3361;Name=EC55989_3290;Dbxref=GeneID:7144908;gbkey=Gene;locus_tag=EC55989_3290
NC_011748.1	RefSeq	CDS	3379193	3379498	.	-	0	ID=cds3112;Name=YP_002404259.1;Parent=gene3361;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404259.1,GeneID:7144908;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404259.1;transl_table=11
NC_011748.1	RefSeq	gene	3379502	3379969	.	-	.	ID=gene3362;Name=EC55989_3291;Dbxref=GeneID:7144909;gbkey=Gene;locus_tag=EC55989_3291
NC_011748.1	RefSeq	CDS	3379502	3379969	.	-	0	ID=cds3113;Name=YP_002404260.1;Parent=gene3362;Note=Evidence 5 : No homology to any previously reported sequences;Dbxref=Genbank:YP_002404260.1,GeneID:7144909;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404260.1;transl_table=11
NC_011748.1	RefSeq	gene	3379980	3381962	.	-	.	ID=gene3363;Name=EC55989_3292;Dbxref=GeneID:7144910;gbkey=Gene;locus_tag=EC55989_3292
NC_011748.1	RefSeq	CDS	3379980	3381962	.	-	0	ID=cds3114;Name=YP_002404261.1;Parent=gene3363;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404261.1,GeneID:7144910;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404261.1;transl_table=11
NC_011748.1	RefSeq	gene	3381975	3382934	.	-	.	ID=gene3364;Name=EC55989_3293;Dbxref=GeneID:7144911;gbkey=Gene;locus_tag=EC55989_3293
NC_011748.1	RefSeq	CDS	3381975	3382934	.	-	0	ID=cds3115;Name=YP_002404262.1;Parent=gene3364;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404262.1,GeneID:7144911;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404262.1;transl_table=11
NC_011748.1	RefSeq	gene	3382898	3384700	.	-	.	ID=gene3365;Name=EC55989_3294;Dbxref=GeneID:7144912;gbkey=Gene;locus_tag=EC55989_3294
NC_011748.1	RefSeq	CDS	3382898	3384700	.	-	0	ID=cds3116;Name=YP_002404263.1;Parent=gene3365;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404263.1,GeneID:7144912;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404263.1;transl_table=11
NC_011748.1	RefSeq	gene	3384693	3385115	.	-	.	ID=gene3366;Name=EC55989_3295;Dbxref=GeneID:7144913;gbkey=Gene;locus_tag=EC55989_3295
NC_011748.1	RefSeq	CDS	3384693	3385115	.	-	0	ID=cds3117;Name=YP_002404264.1;Parent=gene3366;Note=Evidence 5 : No homology to any previously reported sequences;Dbxref=Genbank:YP_002404264.1,GeneID:7144913;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404264.1;transl_table=11
NC_011748.1	RefSeq	gene	3385125	3385631	.	-	.	ID=gene3367;Name=EC55989_3296;Dbxref=GeneID:7144914;gbkey=Gene;locus_tag=EC55989_3296
NC_011748.1	RefSeq	CDS	3385125	3385631	.	-	0	ID=cds3118;Name=YP_002404265.1;Parent=gene3367;Note=Evidence 5 : No homology to any previously reported sequences;Dbxref=Genbank:YP_002404265.1,GeneID:7144914;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404265.1;transl_table=11
NC_011748.1	RefSeq	gene	3385641	3387119	.	-	.	ID=gene3368;Name=EC55989_3297;Dbxref=GeneID:7144915;gbkey=Gene;locus_tag=EC55989_3297
NC_011748.1	RefSeq	CDS	3385641	3387119	.	-	0	ID=cds3119;Name=YP_002404266.1;Parent=gene3368;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404266.1,GeneID:7144915;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404266.1;transl_table=11
NC_011748.1	RefSeq	gene	3387122	3387598	.	-	.	ID=gene3369;Name=EC55989_3298;Dbxref=GeneID:7144916;gbkey=Gene;locus_tag=EC55989_3298
NC_011748.1	RefSeq	CDS	3387122	3387598	.	-	0	ID=cds3120;Name=YP_002404267.1;Parent=gene3369;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404267.1,GeneID:7144916;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404267.1;transl_table=11
NC_011748.1	RefSeq	gene	3387984	3388052	.	-	.	ID=gene3370;Name=RNAout;Dbxref=GeneID:7144917;gbkey=Gene;gene=RNAout;locus_tag=EC55989_misc_RNA_75
NC_011748.1	RefSeq	transcript	3387984	3388052	.	-	.	ID=rna142;Parent=gene3370;Note=Evidence 1c : Function experimentally demonstrated in the studied genus%3B PubMedId : 1691096%3B Product type n : RNA;Dbxref=GeneID:7144917;gbkey=misc_RNA;product=RNAout
NC_011748.1	RefSeq	exon	3387984	3388052	.	-	.	ID=id287;Parent=rna142;Note=Evidence 1c : Function experimentally demonstrated in the studied genus%3B PubMedId : 1691096%3B Product type n : RNA;Dbxref=GeneID:7144917;gbkey=misc_RNA;product=RNAout
NC_011748.1	RefSeq	gene	3388044	3389252	.	+	.	ID=gene3371;Name=EC55989_3299;Dbxref=GeneID:7147442;gbkey=Gene;locus_tag=EC55989_3299
NC_011748.1	RefSeq	CDS	3388044	3389252	.	+	0	ID=cds3121;Name=YP_002404268.1;Parent=gene3371;Note=Evidence 2b : Function of strongly homologous gene%3B PubMedId : 10781570%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002404268.1,GeneID:7147442;gbkey=CDS;product=transposase%2C IS4 family%2C IS10L;protein_id=YP_002404268.1;transl_table=11
NC_011748.1	RefSeq	gene	3389332	3389640	.	+	.	ID=gene3372;Name=EC55989_3300;Dbxref=GeneID:7144918;gbkey=Gene;locus_tag=EC55989_3300
NC_011748.1	RefSeq	CDS	3389332	3389640	.	+	0	ID=cds3122;Name=YP_002404269.1;Parent=gene3372;Note=Evidence 7 : Gene remnant%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002404269.1,GeneID:7144918;gbkey=CDS;product=transposase %28fragment%29%2C IS630 family;protein_id=YP_002404269.1;transl_table=11
NC_011748.1	RefSeq	gene	3389876	3390076	.	+	.	ID=gene3373;Name=EC55989_3302;Dbxref=GeneID:7144919;gbkey=Gene;locus_tag=EC55989_3302
NC_011748.1	RefSeq	CDS	3389876	3390076	.	+	0	ID=cds3123;Name=YP_002404270.1;Parent=gene3373;Note=Evidence 7 : Gene remnant%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002404270.1,GeneID:7144919;gbkey=CDS;product=transposase %28fragment%29%2C IS630 family;protein_id=YP_002404270.1;transl_table=11
NC_011748.1	RefSeq	gene	3390130	3390348	.	+	.	ID=gene3374;Name=EC55989_3303;Dbxref=GeneID:7144920;gbkey=Gene;locus_tag=EC55989_3303
NC_011748.1	RefSeq	CDS	3390130	3390348	.	+	0	ID=cds3124;Name=YP_002404271.1;Parent=gene3374;Note=Evidence 7 : Gene remnant%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002404271.1,GeneID:7144920;gbkey=CDS;product=transposase %28fragment%29%2C IS630 family;protein_id=YP_002404271.1;transl_table=11
NC_011748.1	RefSeq	gene	3390457	3390942	.	-	.	ID=gene3375;Name=EC55989_3305;Dbxref=GeneID:7144921;gbkey=Gene;locus_tag=EC55989_3305
NC_011748.1	RefSeq	CDS	3390457	3390942	.	-	0	ID=cds3125;Name=YP_002404272.1;Parent=gene3375;Note=Evidence 5 : No homology to any previously reported sequences;Dbxref=Genbank:YP_002404272.1,GeneID:7144921;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404272.1;transl_table=11
NC_011748.1	RefSeq	gene	3390836	3391042	.	-	.	ID=gene3376;Name=EC55989_3306;Dbxref=GeneID:7144922;gbkey=Gene;locus_tag=EC55989_3306
NC_011748.1	RefSeq	CDS	3390836	3391042	.	-	0	ID=cds3126;Name=YP_002404273.1;Parent=gene3376;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404273.1,GeneID:7144922;gbkey=CDS;product=polyketide synthase pksM %28fragment%29;protein_id=YP_002404273.1;transl_table=11
NC_011748.1	RefSeq	gene	3391214	3391609	.	+	.	ID=gene3377;Name=EC55989_3307;Dbxref=GeneID:7144923;gbkey=Gene;locus_tag=EC55989_3307
NC_011748.1	RefSeq	CDS	3391214	3391609	.	+	0	ID=cds3127;Name=YP_002404274.1;Parent=gene3377;Note=Evidence 5 : No homology to any previously reported sequences;Dbxref=Genbank:YP_002404274.1,GeneID:7144923;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404274.1;transl_table=11
NC_011748.1	RefSeq	gene	3391435	3391632	.	+	.	ID=gene3378;Name=EC55989_3308;Dbxref=GeneID:7144924;gbkey=Gene;locus_tag=EC55989_3308
NC_011748.1	RefSeq	CDS	3391435	3391632	.	+	0	ID=cds3128;Name=YP_002404275.1;Parent=gene3378;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404275.1,GeneID:7144924;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404275.1;transl_table=11
NC_011748.1	RefSeq	gene	3391663	3391986	.	-	.	ID=gene3379;Name=EC55989_3309;Dbxref=GeneID:7144925;gbkey=Gene;locus_tag=EC55989_3309
NC_011748.1	RefSeq	CDS	3391663	3391986	.	-	0	ID=cds3129;Name=YP_002404276.1;Parent=gene3379;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404276.1,GeneID:7144925;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404276.1;transl_table=11
NC_011748.1	RefSeq	gene	3392052	3392696	.	-	.	ID=gene3380;Name=EC55989_3310;Dbxref=GeneID:7144926;gbkey=Gene;locus_tag=EC55989_3310
NC_011748.1	RefSeq	CDS	3392052	3392696	.	-	0	ID=cds3130;Name=YP_002404277.1;Parent=gene3380;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404277.1,GeneID:7144926;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404277.1;transl_table=11
NC_011748.1	RefSeq	gene	3392717	3393025	.	-	.	ID=gene3381;Name=EC55989_3311;Dbxref=GeneID:7144927;gbkey=Gene;locus_tag=EC55989_3311
NC_011748.1	RefSeq	CDS	3392717	3393025	.	-	0	ID=cds3131;Name=YP_002404278.1;Parent=gene3381;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404278.1,GeneID:7144927;gbkey=CDS;product=transcriptional regulator;protein_id=YP_002404278.1;transl_table=11
NC_011748.1	RefSeq	gene	3393065	3393709	.	-	.	ID=gene3382;Name=ibrB;Dbxref=GeneID:7144928;gbkey=Gene;gene=ibrB;locus_tag=EC55989_3312
NC_011748.1	RefSeq	CDS	3393065	3393709	.	-	0	ID=cds3132;Name=YP_002404279.1;Parent=gene3382;Note=Evidence 2b : Function of strongly homologous gene%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002404279.1,GeneID:7144928;gbkey=CDS;product=transcriptional regulator IbrB;protein_id=YP_002404279.1;transl_table=11
NC_011748.1	RefSeq	gene	3393694	3394926	.	-	.	ID=gene3383;Name=ibrA;Dbxref=GeneID:7146536;gbkey=Gene;gene=ibrA;locus_tag=EC55989_3313
NC_011748.1	RefSeq	CDS	3393694	3394926	.	-	0	ID=cds3133;Name=YP_002404280.1;Parent=gene3383;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 12057959%3B Product type r : regulator;Dbxref=Genbank:YP_002404280.1,GeneID:7146536;gbkey=CDS;product=immunoglobulin-binding regulator;protein_id=YP_002404280.1;transl_table=11
NC_011748.1	RefSeq	gene	3394967	3395797	.	-	.	ID=gene3384;Name=EC55989_3314;Dbxref=GeneID:7146534;gbkey=Gene;locus_tag=EC55989_3314
NC_011748.1	RefSeq	CDS	3394967	3395797	.	-	0	ID=cds3134;Name=YP_002404281.1;Parent=gene3384;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404281.1,GeneID:7146534;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404281.1;transl_table=11
NC_011748.1	RefSeq	gene	3396575	3397942	.	-	.	ID=gene3385;Name=EC55989_3315;Dbxref=GeneID:7144929;gbkey=Gene;locus_tag=EC55989_3315
NC_011748.1	RefSeq	CDS	3396575	3397942	.	-	0	ID=cds3135;Name=YP_002404282.1;Parent=gene3385;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404282.1,GeneID:7144929;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404282.1;transl_table=11
NC_011748.1	RefSeq	gene	3398367	3400154	.	-	.	ID=gene3386;Name=EC55989_3316;Dbxref=GeneID:7144930;gbkey=Gene;locus_tag=EC55989_3316
NC_011748.1	RefSeq	CDS	3398367	3400154	.	-	0	ID=cds3136;Name=YP_002404283.1;Parent=gene3386;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002404283.1,GeneID:7144930;gbkey=CDS;product=UvrD%2FREP helicase;protein_id=YP_002404283.1;transl_table=11
NC_011748.1	RefSeq	STS	3398378	3399575	.	+	.	ID=id288;Dbxref=UniSTS:474270;gbkey=STS
NC_011748.1	RefSeq	gene	3400348	3401514	.	-	.	ID=gene3387;Name=EC55989_3317;Dbxref=GeneID:7144931;gbkey=Gene;locus_tag=EC55989_3317
NC_011748.1	RefSeq	CDS	3400348	3401514	.	-	0	ID=cds3137;Name=YP_002404284.1;Parent=gene3387;Note=Evidence 5 : No homology to any previously reported sequences;Dbxref=Genbank:YP_002404284.1,GeneID:7144931;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404284.1;transl_table=11
NC_011748.1	RefSeq	gene	3401747	3402160	.	-	.	ID=gene3388;Name=EC55989_3318;Dbxref=GeneID:7144932;gbkey=Gene;locus_tag=EC55989_3318
NC_011748.1	RefSeq	CDS	3401747	3402160	.	-	0	ID=cds3138;Name=YP_002404285.1;Parent=gene3388;Dbxref=Genbank:YP_002404285.1,GeneID:7144932;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404285.1;transl_table=11
NC_011748.1	RefSeq	gene	3402305	3402739	.	-	.	ID=gene3389;Name=EC55989_3319;Dbxref=GeneID:7144933;gbkey=Gene;locus_tag=EC55989_3319
NC_011748.1	RefSeq	CDS	3402305	3402739	.	-	0	ID=cds3139;Name=YP_002404286.1;Parent=gene3389;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404286.1,GeneID:7144933;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404286.1;transl_table=11
NC_011748.1	RefSeq	gene	3402739	3403275	.	-	.	ID=gene3390;Name=EC55989_3320;Dbxref=GeneID:7144934;gbkey=Gene;locus_tag=EC55989_3320
NC_011748.1	RefSeq	CDS	3402739	3403275	.	-	0	ID=cds3140;Name=YP_002404287.1;Parent=gene3390;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404287.1,GeneID:7144934;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404287.1;transl_table=11
NC_011748.1	RefSeq	gene	3403256	3404356	.	-	.	ID=gene3391;Name=EC55989_3321;Dbxref=GeneID:7144935;gbkey=Gene;locus_tag=EC55989_3321
NC_011748.1	RefSeq	CDS	3403256	3404356	.	-	0	ID=cds3141;Name=YP_002404288.1;Parent=gene3391;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404288.1,GeneID:7144935;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404288.1;transl_table=11
NC_011748.1	RefSeq	gene	3404311	3406074	.	-	.	ID=gene3392;Name=EC55989_3322;Dbxref=GeneID:7144936;gbkey=Gene;locus_tag=EC55989_3322
NC_011748.1	RefSeq	CDS	3404311	3406074	.	-	0	ID=cds3142;Name=YP_002404289.1;Parent=gene3392;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404289.1,GeneID:7144936;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404289.1;transl_table=11
NC_011748.1	RefSeq	gene	3406082	3406879	.	-	.	ID=gene3393;Name=EC55989_3323;Dbxref=GeneID:7144937;gbkey=Gene;locus_tag=EC55989_3323
NC_011748.1	RefSeq	CDS	3406082	3406879	.	-	0	ID=cds3143;Name=YP_002404290.1;Parent=gene3393;Note=Evidence 5 : No homology to any previously reported sequences;Dbxref=Genbank:YP_002404290.1,GeneID:7144937;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404290.1;transl_table=11
NC_011748.1	RefSeq	gene	3406776	3408374	.	-	.	ID=gene3394;Name=EC55989_3324;Dbxref=GeneID:7144938;gbkey=Gene;locus_tag=EC55989_3324
NC_011748.1	RefSeq	CDS	3406776	3408374	.	-	0	ID=cds3144;Name=YP_002404291.1;Parent=gene3394;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404291.1,GeneID:7144938;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404291.1;transl_table=11
NC_011748.1	RefSeq	gene	3408374	3411763	.	-	.	ID=gene3395;Name=EC55989_3325;Dbxref=GeneID:7144939;gbkey=Gene;locus_tag=EC55989_3325
NC_011748.1	RefSeq	CDS	3408374	3411763	.	-	0	ID=cds3145;Name=YP_002404292.1;Parent=gene3395;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404292.1,GeneID:7144939;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404292.1;transl_table=11
NC_011748.1	RefSeq	gene	3411756	3412904	.	-	.	ID=gene3396;Name=EC55989_3326;Dbxref=GeneID:7144940;gbkey=Gene;locus_tag=EC55989_3326
NC_011748.1	RefSeq	CDS	3411756	3412904	.	-	0	ID=cds3146;Name=YP_002404293.1;Parent=gene3396;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404293.1,GeneID:7144940;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404293.1;transl_table=11
NC_011748.1	RefSeq	gene	3412908	3413174	.	-	.	ID=gene3397;Name=EC55989_3327;Dbxref=GeneID:7144941;gbkey=Gene;locus_tag=EC55989_3327
NC_011748.1	RefSeq	CDS	3412908	3413174	.	-	0	ID=cds3147;Name=YP_002404294.1;Parent=gene3397;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404294.1,GeneID:7144941;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404294.1;transl_table=11
NC_011748.1	RefSeq	gene	3413206	3413883	.	-	.	ID=gene3398;Name=EC55989_3328;Dbxref=GeneID:7144942;gbkey=Gene;locus_tag=EC55989_3328
NC_011748.1	RefSeq	CDS	3413206	3413883	.	-	0	ID=cds3148;Name=YP_002404295.1;Parent=gene3398;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404295.1,GeneID:7144942;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404295.1;transl_table=11
NC_011748.1	RefSeq	gene	3414027	3414704	.	-	.	ID=gene3399;Name=EC55989_3329;Dbxref=GeneID:7144943;gbkey=Gene;locus_tag=EC55989_3329
NC_011748.1	RefSeq	CDS	3414027	3414704	.	-	0	ID=cds3149;Name=YP_002404296.1;Parent=gene3399;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404296.1,GeneID:7144943;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404296.1;transl_table=11
NC_011748.1	RefSeq	gene	3414724	3416406	.	-	.	ID=gene3400;Name=EC55989_3330;Dbxref=GeneID:7144944;gbkey=Gene;locus_tag=EC55989_3330
NC_011748.1	RefSeq	CDS	3414724	3416406	.	-	0	ID=cds3150;Name=YP_002404297.1;Parent=gene3400;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404297.1,GeneID:7144944;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404297.1;transl_table=11
NC_011748.1	RefSeq	gene	3416403	3418928	.	-	.	ID=gene3401;Name=EC55989_3331;Dbxref=GeneID:7144945;gbkey=Gene;locus_tag=EC55989_3331
NC_011748.1	RefSeq	CDS	3416403	3418928	.	-	0	ID=cds3151;Name=YP_002404298.1;Parent=gene3401;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404298.1,GeneID:7144945;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404298.1;transl_table=11
NC_011748.1	RefSeq	gene	3419451	3420026	.	-	.	ID=gene3402;Name=EC55989_3333;Dbxref=GeneID:7144946;gbkey=Gene;locus_tag=EC55989_3333
NC_011748.1	RefSeq	CDS	3419451	3420026	.	-	0	ID=cds3152;Name=YP_002404299.1;Parent=gene3402;Note=Evidence 5 : No homology to any previously reported sequences;Dbxref=Genbank:YP_002404299.1,GeneID:7144946;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404299.1;transl_table=11
NC_011748.1	RefSeq	gene	3420014	3422680	.	-	.	ID=gene3403;Name=EC55989_3334;Dbxref=GeneID:7144947;gbkey=Gene;locus_tag=EC55989_3334
NC_011748.1	RefSeq	CDS	3420014	3422680	.	-	0	ID=cds3153;Name=YP_002404300.1;Parent=gene3403;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pf :  factor;Dbxref=Genbank:YP_002404300.1,GeneID:7144947;gbkey=CDS;product=chaperone clpB;protein_id=YP_002404300.1;transl_table=11
NC_011748.1	RefSeq	gene	3422840	3423331	.	-	.	ID=gene3404;Name=EC55989_3335;Dbxref=GeneID:7144948;gbkey=Gene;locus_tag=EC55989_3335
NC_011748.1	RefSeq	CDS	3422840	3423331	.	-	0	ID=cds3154;Name=YP_002404301.1;Parent=gene3404;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404301.1,GeneID:7144948;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404301.1;transl_table=11
NC_011748.1	RefSeq	gene	3423337	3425163	.	-	.	ID=gene3405;Name=EC55989_3336;Dbxref=GeneID:7144949;gbkey=Gene;locus_tag=EC55989_3336
NC_011748.1	RefSeq	CDS	3423337	3425163	.	-	0	ID=cds3155;Name=YP_002404302.1;Parent=gene3405;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404302.1,GeneID:7144949;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404302.1;transl_table=11
NC_011748.1	RefSeq	gene	3425070	3425789	.	-	.	ID=gene3406;Name=EC55989_3337;Dbxref=GeneID:7144950;gbkey=Gene;locus_tag=EC55989_3337
NC_011748.1	RefSeq	CDS	3425070	3425789	.	-	0	ID=cds3156;Name=YP_002404303.1;Parent=gene3406;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404303.1,GeneID:7144950;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404303.1;transl_table=11
NC_011748.1	RefSeq	gene	3425720	3427057	.	-	.	ID=gene3407;Name=EC55989_3338;Dbxref=GeneID:7144951;gbkey=Gene;locus_tag=EC55989_3338
NC_011748.1	RefSeq	CDS	3425720	3427057	.	-	0	ID=cds3157;Name=YP_002404304.1;Parent=gene3407;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404304.1,GeneID:7144951;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404304.1;transl_table=11
NC_011748.1	RefSeq	gene	3427073	3428617	.	-	.	ID=gene3408;Name=EC55989_3339;Dbxref=GeneID:7144952;gbkey=Gene;locus_tag=EC55989_3339
NC_011748.1	RefSeq	CDS	3427073	3428617	.	-	0	ID=cds3158;Name=YP_002404305.1;Parent=gene3408;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404305.1,GeneID:7144952;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404305.1;transl_table=11
NC_011748.1	RefSeq	gene	3428639	3429160	.	-	.	ID=gene3409;Name=EC55989_3340;Dbxref=GeneID:7144953;gbkey=Gene;locus_tag=EC55989_3340
NC_011748.1	RefSeq	CDS	3428639	3429160	.	-	0	ID=cds3159;Name=YP_002404306.1;Parent=gene3409;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404306.1,GeneID:7144953;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404306.1;transl_table=11
NC_011748.1	RefSeq	gene	3429643	3429834	.	+	.	ID=gene3410;Name=EC55989_3342;Dbxref=GeneID:7144954;gbkey=Gene;locus_tag=EC55989_3342
NC_011748.1	RefSeq	CDS	3429643	3429834	.	+	0	ID=cds3160;Name=YP_002404307.1;Parent=gene3410;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404307.1,GeneID:7144954;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404307.1;transl_table=11
NC_011748.1	RefSeq	gene	3429887	3430195	.	-	.	ID=gene3411;Name=EC55989_3343;Dbxref=GeneID:7144955;gbkey=Gene;locus_tag=EC55989_3343
NC_011748.1	RefSeq	CDS	3429887	3430195	.	-	0	ID=cds3161;Name=YP_002404308.1;Parent=gene3411;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404308.1,GeneID:7144955;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404308.1;transl_table=11
NC_011748.1	RefSeq	gene	3430216	3430875	.	-	.	ID=gene3412;Name=EC55989_3344;Dbxref=GeneID:7144956;gbkey=Gene;locus_tag=EC55989_3344
NC_011748.1	RefSeq	CDS	3430216	3430875	.	-	0	ID=cds3162;Name=YP_002404309.1;Parent=gene3412;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404309.1,GeneID:7144956;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404309.1;transl_table=11
NC_011748.1	RefSeq	gene	3431148	3431621	.	-	.	ID=gene3413;Name=EC55989_3345;Dbxref=GeneID:7144957;gbkey=Gene;locus_tag=EC55989_3345
NC_011748.1	RefSeq	CDS	3431148	3431621	.	-	0	ID=cds3163;Name=YP_002404310.1;Parent=gene3413;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404310.1,GeneID:7144957;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404310.1;transl_table=11
NC_011748.1	RefSeq	gene	3431557	3431946	.	-	.	ID=gene3414;Name=EC55989_3346;Dbxref=GeneID:7144958;gbkey=Gene;locus_tag=EC55989_3346
NC_011748.1	RefSeq	CDS	3431557	3431946	.	-	0	ID=cds3164;Name=YP_002404311.1;Parent=gene3414;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404311.1,GeneID:7144958;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404311.1;transl_table=11
NC_011748.1	RefSeq	gene	3432108	3432677	.	-	.	ID=gene3415;Name=EC55989_3348;Dbxref=GeneID:7144959;gbkey=Gene;locus_tag=EC55989_3348
NC_011748.1	RefSeq	CDS	3432108	3432677	.	-	0	ID=cds3165;Name=YP_002404312.1;Parent=gene3415;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404312.1,GeneID:7144959;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404312.1;transl_table=11
NC_011748.1	RefSeq	gene	3432881	3433054	.	+	.	ID=gene3416;Name=EC55989_3349;Dbxref=GeneID:7144960;gbkey=Gene;locus_tag=EC55989_3349
NC_011748.1	RefSeq	CDS	3432881	3433054	.	+	0	ID=cds3166;Name=YP_002404313.1;Parent=gene3416;Note=Evidence 5 : No homology to any previously reported sequences;Dbxref=Genbank:YP_002404313.1,GeneID:7144960;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404313.1;transl_table=11
NC_011748.1	RefSeq	gene	3432924	3433127	.	-	.	ID=gene3417;Name=EC55989_3350;Dbxref=GeneID:7144961;gbkey=Gene;locus_tag=EC55989_3350
NC_011748.1	RefSeq	CDS	3432924	3433127	.	-	0	ID=cds3167;Name=YP_002404314.1;Parent=gene3417;Note=Evidence 5 : No homology to any previously reported sequences;Dbxref=Genbank:YP_002404314.1,GeneID:7144961;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404314.1;transl_table=11
NC_011748.1	RefSeq	gene	3433294	3433506	.	-	.	ID=gene3418;Name=EC55989_3351;Dbxref=GeneID:7144962;gbkey=Gene;locus_tag=EC55989_3351
NC_011748.1	RefSeq	CDS	3433294	3433506	.	-	0	ID=cds3168;Name=YP_002404315.1;Parent=gene3418;Note=Evidence 2b : Function of strongly homologous gene%3B PubMedId : 1956303%2C 8145648%2C 1484495%3B Product type f : factor;Dbxref=Genbank:YP_002404315.1,GeneID:7144962;gbkey=CDS;product=hemolysin expression-modulating protein;protein_id=YP_002404315.1;transl_table=11
NC_011748.1	RefSeq	gene	3434133	3434411	.	+	.	ID=gene3419;Name=EC55989_3352;Dbxref=GeneID:7144963;gbkey=Gene;locus_tag=EC55989_3352;pseudo=true
NC_011748.1	RefSeq	region	3434133	3434411	.	+	.	ID=id289;Note=fragment of conserved hypothetical protein %28partial%29%3BEvidence 7 : Gene remnant;Dbxref=GeneID:7144963;gbkey=misc_feature
NC_011748.1	RefSeq	gene	3434470	3435069	.	+	.	ID=gene3420;Name=EC55989_3353;Dbxref=GeneID:7144964;gbkey=Gene;locus_tag=EC55989_3353
NC_011748.1	RefSeq	CDS	3434470	3435069	.	+	0	ID=cds3169;Name=YP_002404316.1;Parent=gene3420;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404316.1,GeneID:7144964;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404316.1;transl_table=11
NC_011748.1	RefSeq	gene	3435055	3435291	.	-	.	ID=gene3421;Name=EC55989_3354;Dbxref=GeneID:7144965;gbkey=Gene;locus_tag=EC55989_3354
NC_011748.1	RefSeq	CDS	3435055	3435291	.	-	0	ID=cds3170;Name=YP_002404317.1;Parent=gene3421;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404317.1,GeneID:7144965;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404317.1;transl_table=11
NC_011748.1	RefSeq	gene	3436564	3437583	.	+	.	ID=gene3422;Name=EC55989_3355;Dbxref=GeneID:7144966;gbkey=Gene;locus_tag=EC55989_3355
NC_011748.1	RefSeq	CDS	3436564	3437583	.	+	0	ID=cds3171;Name=YP_002404318.1;Parent=gene3422;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404318.1,GeneID:7144966;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404318.1;transl_table=11
NC_011748.1	RefSeq	gene	3437654	3438565	.	+	.	ID=gene3423;Name=EC55989_3356;Dbxref=GeneID:7144967;gbkey=Gene;locus_tag=EC55989_3356
NC_011748.1	RefSeq	CDS	3437654	3438565	.	+	0	ID=cds3172;Name=YP_002404319.1;Parent=gene3423;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404319.1,GeneID:7144967;gbkey=CDS;product=GTPase;protein_id=YP_002404319.1;transl_table=11
NC_011748.1	RefSeq	gene	3438665	3438870	.	+	.	ID=gene3424;Name=isrC;Dbxref=GeneID:7144968;gbkey=Gene;gene=isrC;locus_tag=EC55989_misc_RNA_76
NC_011748.1	RefSeq	transcript	3438665	3438870	.	+	.	ID=rna143;Parent=gene3424;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 12069726%3B Product type n : RNA;Dbxref=GeneID:7144968;gbkey=misc_RNA;product=IsrC
NC_011748.1	RefSeq	exon	3438665	3438870	.	+	.	ID=id290;Parent=rna143;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 12069726%3B Product type n : RNA;Dbxref=GeneID:7144968;gbkey=misc_RNA;product=IsrC
NC_011748.1	RefSeq	gene	3438893	3442018	.	+	.	ID=gene3425;Name=flu;Dbxref=GeneID:7146635;gbkey=Gene;gene=flu;locus_tag=EC55989_3357
NC_011748.1	RefSeq	CDS	3438893	3442018	.	+	0	ID=cds3173;Name=YP_002404320.1;Parent=gene3425;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 20392470%2C 97257509%2C 99212225%2C 2661530%2C 9298646%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002404320.1,GeneID:7146635;gbkey=CDS;product=antigen 43 %28Ag43%29 phase-variable biofilm formation autotransporter%3B CP4-44 prophage;protein_id=YP_002404320.1;transl_table=11
NC_011748.1	RefSeq	gene	3442133	3444655	.	+	.	ID=gene3426;Name=EC55989_3358;Dbxref=GeneID:7146163;gbkey=Gene;locus_tag=EC55989_3358
NC_011748.1	RefSeq	CDS	3442133	3444655	.	+	0	ID=cds3174;Name=YP_002404321.1;Parent=gene3426;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002404321.1,GeneID:7146163;gbkey=CDS;product=membrane protein%2C yeeR;protein_id=YP_002404321.1;transl_table=11
NC_011748.1	RefSeq	gene	3444731	3445186	.	+	.	ID=gene3427;Name=EC55989_3359;Dbxref=GeneID:7144969;gbkey=Gene;locus_tag=EC55989_3359
NC_011748.1	RefSeq	CDS	3444731	3445186	.	+	0	ID=cds3175;Name=YP_002404322.1;Parent=gene3427;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404322.1,GeneID:7144969;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404322.1;transl_table=11
NC_011748.1	RefSeq	gene	3445265	3445498	.	+	.	ID=gene3428;Name=EC55989_3360;Dbxref=GeneID:7144970;gbkey=Gene;locus_tag=EC55989_3360
NC_011748.1	RefSeq	CDS	3445265	3445498	.	+	0	ID=cds3176;Name=YP_002404323.1;Parent=gene3428;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404323.1,GeneID:7144970;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404323.1;transl_table=11
NC_011748.1	RefSeq	gene	3445598	3446416	.	+	.	ID=gene3429;Name=EC55989_3361;Dbxref=GeneID:7144971;gbkey=Gene;locus_tag=EC55989_3361
NC_011748.1	RefSeq	CDS	3445598	3446416	.	+	0	ID=cds3177;Name=YP_002404324.1;Parent=gene3429;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404324.1,GeneID:7144971;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404324.1;transl_table=11
NC_011748.1	RefSeq	gene	3446718	3447191	.	+	.	ID=gene3430;Name=EC55989_3362;Dbxref=GeneID:7144972;gbkey=Gene;locus_tag=EC55989_3362;pseudo=true
NC_011748.1	RefSeq	region	3446718	3447191	.	+	.	ID=id291;Note=fragment of  antirestriction protein %28partial%29%3BEvidence 7 : Gene remnant;Dbxref=GeneID:7144972;gbkey=misc_feature
NC_011748.1	RefSeq	gene	3447237	3447683	.	+	.	ID=gene3431;Name=yeeS;Dbxref=GeneID:7144973;gbkey=Gene;gene=yeeS;locus_tag=EC55989_3363
NC_011748.1	RefSeq	CDS	3447237	3447683	.	+	0	ID=cds3178;Name=YP_002404325.1;Parent=gene3431;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 11053371%3B Product type pf :  factor;Dbxref=Genbank:YP_002404325.1,GeneID:7144973;gbkey=CDS;product=DNA repair protein%3B CP4-44 prophage;protein_id=YP_002404325.1;transl_table=11
NC_011748.1	RefSeq	gene	3447770	3447991	.	+	.	ID=gene3432;Name=yeeT;Dbxref=GeneID:7148605;gbkey=Gene;gene=yeeT;locus_tag=EC55989_3364
NC_011748.1	RefSeq	CDS	3447770	3447991	.	+	0	ID=cds3179;Name=YP_002404326.1;Parent=gene3432;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002404326.1,GeneID:7148605;gbkey=CDS;product=CP4-44 prophage;protein_id=YP_002404326.1;transl_table=11
NC_011748.1	RefSeq	gene	3448071	3448448	.	+	.	ID=gene3433;Name=yeeU;Dbxref=GeneID:7148609;gbkey=Gene;gene=yeeU;locus_tag=EC55989_3365
NC_011748.1	RefSeq	CDS	3448071	3448448	.	+	0	ID=cds3180;Name=YP_002404327.1;Parent=gene3433;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 14594833%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002404327.1,GeneID:7148609;gbkey=CDS;product=antitoxin of the YeeV-YeeU toxin-antitoxin system%3B CP4-44 prophage;protein_id=YP_002404327.1;transl_table=11
NC_011748.1	RefSeq	gene	3448390	3448872	.	+	.	ID=gene3434;Name=yeeV;Dbxref=GeneID:7148613;gbkey=Gene;gene=yeeV;locus_tag=EC55989_3366
NC_011748.1	RefSeq	CDS	3448390	3448872	.	+	0	ID=cds3181;Name=YP_002404328.1;Parent=gene3434;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 14594833%3B Product type f : factor;Dbxref=Genbank:YP_002404328.1,GeneID:7148613;gbkey=CDS;product=toxin of the YeeV-YeeU toxin-antitoxin system;protein_id=YP_002404328.1;transl_table=11
NC_011748.1	RefSeq	gene	3448869	3449291	.	+	.	ID=gene3435;Name=yeeW;Dbxref=GeneID:7148617;gbkey=Gene;gene=yeeW;locus_tag=EC55989_3367
NC_011748.1	RefSeq	CDS	3448869	3449291	.	+	0	ID=cds3182;Name=YP_002404329.1;Parent=gene3435;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404329.1,GeneID:7148617;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404329.1;transl_table=11
NC_011748.1	RefSeq	gene	3449376	3450218	.	+	.	ID=gene3436;Name=EC55989_3368;Dbxref=GeneID:7148620;gbkey=Gene;locus_tag=EC55989_3368
NC_011748.1	RefSeq	CDS	3449376	3450218	.	+	0	ID=cds3183;Name=YP_002404330.1;Parent=gene3436;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 9987116;Dbxref=Genbank:YP_002404330.1,GeneID:7148620;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404330.1;transl_table=11
NC_011748.1	RefSeq	gene	3450499	3451035	.	-	.	ID=gene3437;Name=yghD;Dbxref=GeneID:7144974;gbkey=Gene;gene=yghD;locus_tag=EC55989_3369
NC_011748.1	RefSeq	CDS	3450499	3451035	.	-	0	ID=cds3184;Name=YP_002404331.1;Parent=gene3437;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002404331.1,GeneID:7144974;gbkey=CDS;product=general secretion pathway protein YghD;protein_id=YP_002404331.1;transl_table=11
NC_011748.1	RefSeq	gene	3451037	3452215	.	-	.	ID=gene3438;Name=yghE;Dbxref=GeneID:7148879;gbkey=Gene;gene=yghE;locus_tag=EC55989_3370
NC_011748.1	RefSeq	CDS	3451037	3452215	.	-	0	ID=cds3185;Name=YP_002404332.1;Parent=gene3438;Note=similar to general secretory pathway protein L;Dbxref=Genbank:YP_002404332.1,GeneID:7148879;gbkey=CDS;product=GspL-like protein;protein_id=YP_002404332.1;transl_table=11
NC_011748.1	RefSeq	gene	3452212	3453189	.	-	.	ID=gene3439;Name=EC55989_3371;Dbxref=GeneID:7148880;gbkey=Gene;locus_tag=EC55989_3371
NC_011748.1	RefSeq	CDS	3452212	3453189	.	-	0	ID=cds3186;Name=YP_002404333.1;Parent=gene3439;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002404333.1,GeneID:7148880;gbkey=CDS;product=type II secretion protein %28GspK-like%29;protein_id=YP_002404333.1;transl_table=11
NC_011748.1	RefSeq	gene	3453192	3453791	.	-	.	ID=gene3440;Name=EC55989_3372;Dbxref=GeneID:7144975;gbkey=Gene;locus_tag=EC55989_3372
NC_011748.1	RefSeq	CDS	3453192	3453791	.	-	0	ID=cds3187;Name=YP_002404334.1;Parent=gene3440;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404334.1,GeneID:7144975;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404334.1;transl_table=11
NC_011748.1	RefSeq	gene	3453788	3454159	.	-	.	ID=gene3441;Name=EC55989_3373;Dbxref=GeneID:7144976;gbkey=Gene;locus_tag=EC55989_3373
NC_011748.1	RefSeq	CDS	3453788	3454159	.	-	0	ID=cds3188;Name=YP_002404335.1;Parent=gene3441;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002404335.1,GeneID:7144976;gbkey=CDS;product=type II secretion protein %28GspI-like%29;protein_id=YP_002404335.1;transl_table=11
NC_011748.1	RefSeq	gene	3454156	3454719	.	-	.	ID=gene3442;Name=EC55989_3374;Dbxref=GeneID:7144977;gbkey=Gene;locus_tag=EC55989_3374
NC_011748.1	RefSeq	CDS	3454156	3454719	.	-	0	ID=cds3189;Name=YP_002404336.1;Parent=gene3442;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404336.1,GeneID:7144977;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404336.1;transl_table=11
NC_011748.1	RefSeq	gene	3454723	3455205	.	-	.	ID=gene3443;Name=EC55989_3375;Dbxref=GeneID:7144978;gbkey=Gene;locus_tag=EC55989_3375
NC_011748.1	RefSeq	CDS	3454723	3455205	.	-	0	ID=cds3190;Name=YP_002404337.1;Parent=gene3443;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002404337.1,GeneID:7144978;gbkey=CDS;product=general secretion pathway protein G precursor %28epsG-like%29;protein_id=YP_002404337.1;transl_table=11
NC_011748.1	RefSeq	gene	3455195	3456418	.	-	.	ID=gene3444;Name=epsF;Dbxref=GeneID:7144979;gbkey=Gene;gene=epsF;locus_tag=EC55989_3376
NC_011748.1	RefSeq	CDS	3455195	3456418	.	-	0	ID=cds3191;Name=YP_002404338.1;Parent=gene3444;Note=Evidence 2b : Function of strongly homologous gene%3B Product type t : transporter;Dbxref=Genbank:YP_002404338.1,GeneID:7144979;gbkey=CDS;product=General secretion pathway protein F;protein_id=YP_002404338.1;transl_table=11
NC_011748.1	RefSeq	gene	3456418	3457911	.	-	.	ID=gene3445;Name=epsE;Dbxref=GeneID:7146017;gbkey=Gene;gene=epsE;locus_tag=EC55989_3377
NC_011748.1	RefSeq	CDS	3456418	3457911	.	-	0	ID=cds3192;Name=YP_002404339.1;Parent=gene3445;Note=Evidence 2b : Function of strongly homologous gene%3B Product type t : transporter;Dbxref=Genbank:YP_002404339.1,GeneID:7146017;gbkey=CDS;product=general secretion pathway protein E;protein_id=YP_002404339.1;transl_table=11
NC_011748.1	RefSeq	gene	3457911	3459971	.	-	.	ID=gene3446;Name=epsD;Dbxref=GeneID:7146016;gbkey=Gene;gene=epsD;locus_tag=EC55989_3378
NC_011748.1	RefSeq	CDS	3457911	3459971	.	-	0	ID=cds3193;Name=YP_002404340.1;Parent=gene3446;Note=Evidence 2b : Function of strongly homologous gene%3B Product type t : transporter;Dbxref=Genbank:YP_002404340.1,GeneID:7146016;gbkey=CDS;product=general secretion pathway protein D;protein_id=YP_002404340.1;transl_table=11
NC_011748.1	RefSeq	gene	3460001	3460960	.	-	.	ID=gene3447;Name=yghF;Dbxref=GeneID:7146015;gbkey=Gene;gene=yghF;locus_tag=EC55989_3379
NC_011748.1	RefSeq	CDS	3460001	3460960	.	-	0	ID=cds3194;Name=YP_002404341.1;Parent=gene3447;Note=part of the general %28type II%29 secretion pathway %28GSP%29%2C a signal sequence-dependent process responsible for protein export%3B involved in trans-location of exoproteins from the cytoplasm to the periplasm;Dbxref=Genbank:YP_002404341.1,GeneID:7146015;gbkey=CDS;product=type II secretion protein GspC;protein_id=YP_002404341.1;transl_table=11
NC_011748.1	RefSeq	gene	3460978	3461388	.	-	.	ID=gene3448;Name=yghG;Dbxref=GeneID:7148881;gbkey=Gene;gene=yghG;locus_tag=EC55989_3380
NC_011748.1	RefSeq	CDS	3460978	3461388	.	-	0	ID=cds3195;Name=YP_002404342.1;Parent=gene3448;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404342.1,GeneID:7148881;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404342.1;transl_table=11
NC_011748.1	RefSeq	gene	3461454	3462263	.	-	.	ID=gene3449;Name=pppA;Dbxref=GeneID:7148882;gbkey=Gene;gene=pppA;locus_tag=EC55989_3381
NC_011748.1	RefSeq	CDS	3461454	3462263	.	-	0	ID=cds3196;Name=YP_002404343.1;Parent=gene3449;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 98175453%3B Product type e : enzyme;Dbxref=Genbank:YP_002404343.1,GeneID:7148882;gbkey=CDS;product=bifunctional prepilin leader peptidase and methylase;protein_id=YP_002404343.1;transl_table=11
NC_011748.1	RefSeq	gene	3462403	3466986	.	-	.	ID=gene3450;Name=yghJ;Dbxref=GeneID:7147233;gbkey=Gene;gene=yghJ;locus_tag=EC55989_3382
NC_011748.1	RefSeq	CDS	3462403	3466986	.	-	0	ID=cds3197;Name=YP_002404344.1;Parent=gene3450;Note=Evidence 2b : Function of strongly homologous gene%3B PubMedId : 1644747%3B Product type lp : lipoprotein;Dbxref=Genbank:YP_002404344.1,GeneID:7147233;gbkey=CDS;product=inner membrane lipoprotein;protein_id=YP_002404344.1;transl_table=11
NC_011748.1	RefSeq	gene	3467116	3467328	.	+	.	ID=gene3451;Name=EC55989_3383;Dbxref=GeneID:7148883;gbkey=Gene;locus_tag=EC55989_3383
NC_011748.1	RefSeq	CDS	3467116	3467328	.	+	0	ID=cds3198;Name=YP_002404345.1;Parent=gene3451;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404345.1,GeneID:7148883;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404345.1;transl_table=11
NC_011748.1	RefSeq	gene	3467454	3469136	.	-	.	ID=gene3452;Name=yghK;Dbxref=GeneID:7144980;gbkey=Gene;gene=yghK;locus_tag=EC55989_3384
NC_011748.1	RefSeq	CDS	3467454	3469136	.	-	0	ID=cds3199;Name=YP_002404346.1;Parent=gene3452;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 11785976%2C 21178909%2C 11283302%3B Product type t : transporter;Dbxref=Genbank:YP_002404346.1,GeneID:7144980;gbkey=CDS;product=glycolate transporter;protein_id=YP_002404346.1;transl_table=11
NC_011748.1	RefSeq	gene	3469492	3471663	.	-	.	ID=gene3453;Name=glcB;Dbxref=GeneID:7148884;gbkey=Gene;gene=glcB;locus_tag=EC55989_3385
NC_011748.1	RefSeq	CDS	3469492	3471663	.	-	0	ID=cds3200;Name=YP_002404347.1;Parent=gene3453;Note=catalyzes the formation of malate from glyoxylate and acetyl-CoA;Dbxref=Genbank:YP_002404347.1,GeneID:7148884;gbkey=CDS;product=malate synthase G;protein_id=YP_002404347.1;transl_table=11
NC_011748.1	RefSeq	gene	3471685	3472089	.	-	.	ID=gene3454;Name=glcG;Dbxref=GeneID:7146285;gbkey=Gene;gene=glcG;locus_tag=EC55989_3386
NC_011748.1	RefSeq	CDS	3471685	3472089	.	-	0	ID=cds3201;Name=YP_002404348.1;Parent=gene3454;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404348.1,GeneID:7146285;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404348.1;transl_table=11
NC_011748.1	RefSeq	gene	3472094	3473317	.	-	.	ID=gene3455;Name=glcF;Dbxref=GeneID:7146290;gbkey=Gene;gene=glcF;locus_tag=EC55989_3387
NC_011748.1	RefSeq	CDS	3472094	3473317	.	-	0	ID=cds3202;Name=YP_002404349.1;Parent=gene3455;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 96178972%2C 8606183%3B Product type c : carrier;Dbxref=Genbank:YP_002404349.1,GeneID:7146290;gbkey=CDS;product=glycolate oxidase iron-sulfur subunit;protein_id=YP_002404349.1;transl_table=11
NC_011748.1	RefSeq	gene	3473328	3474380	.	-	.	ID=gene3456;Name=glcE;Dbxref=GeneID:7146289;gbkey=Gene;gene=glcE;locus_tag=EC55989_3388
NC_011748.1	RefSeq	CDS	3473328	3474380	.	-	0	ID=cds3203;Name=YP_002404350.1;Parent=gene3456;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 96178972%2C 8606183%3B Product type e : enzyme;Dbxref=Genbank:YP_002404350.1,GeneID:7146289;gbkey=CDS;product=glycolate oxidase FAD binding subunit;protein_id=YP_002404350.1;transl_table=11
NC_011748.1	RefSeq	gene	3474380	3475879	.	-	.	ID=gene3457;Name=glcD;Dbxref=GeneID:7146288;gbkey=Gene;gene=glcD;locus_tag=EC55989_3389
NC_011748.1	RefSeq	CDS	3474380	3475879	.	-	0	ID=cds3204;Name=YP_002404351.1;Parent=gene3457;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 96178972%2C 8606183%3B Product type e : enzyme;Dbxref=Genbank:YP_002404351.1,GeneID:7146288;gbkey=CDS;product=glycolate oxidase subunit GlcD;protein_id=YP_002404351.1;transl_table=11
NC_011748.1	RefSeq	gene	3476070	3476726	.	+	.	ID=gene3458;Name=glcC;Dbxref=GeneID:7146287;gbkey=Gene;gene=glcC;locus_tag=EC55989_3390;pseudo=true
NC_011748.1	RefSeq	region	3476070	3476726	.	+	.	ID=id292;Note=fragment of DNA-binding transcriptional dual regulator%2C glycolate-binding %28partial%29%3BEvidence 7 : Gene remnant%3B Product type r : regulator;Dbxref=GeneID:7146287;gbkey=misc_feature
NC_011748.1	RefSeq	gene	3476720	3477223	.	-	.	ID=gene3459;Name=EC55989_3391;Dbxref=GeneID:7146286;gbkey=Gene;locus_tag=EC55989_3391
NC_011748.1	RefSeq	CDS	3476720	3477223	.	-	0	ID=cds3205;Name=YP_002404352.1;Parent=gene3459;Note=Evidence 2b : Function of strongly homologous gene%3B PubMedId : 273224%2C 375010%2C 1849492%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002404352.1,GeneID:7146286;gbkey=CDS;product=transposase ORF B IS1;protein_id=YP_002404352.1;transl_table=11
NC_011748.1	RefSeq	gene	3477142	3477417	.	-	.	ID=gene3460;Name=insA;Dbxref=GeneID:7144981;gbkey=Gene;gene=insA;locus_tag=EC55989_3392
NC_011748.1	RefSeq	CDS	3477142	3477417	.	-	0	ID=cds3206;Name=YP_002404353.1;Parent=gene3460;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 9689094%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002404353.1,GeneID:7144981;gbkey=CDS;product=IS1 repressor protein InsA;protein_id=YP_002404353.1;transl_table=11
NC_011748.1	RefSeq	gene	3477459	3477551	.	+	.	ID=gene3461;Name=EC55989_3393;Dbxref=GeneID:7146578;gbkey=Gene;locus_tag=EC55989_3393;pseudo=true
NC_011748.1	RefSeq	region	3477459	3477551	.	+	.	ID=id293;Note=fragment of conserved hypothetical protein %28partial%29%3BEvidence 7 : Gene remnant;Dbxref=GeneID:7146578;gbkey=misc_feature
NC_011748.1	RefSeq	gene	3477551	3478723	.	+	.	ID=gene3462;Name=EC55989_3394;Dbxref=GeneID:7144982;gbkey=Gene;locus_tag=EC55989_3394
NC_011748.1	RefSeq	CDS	3477551	3478723	.	+	0	ID=cds3207;Name=YP_002404354.1;Parent=gene3462;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002404354.1,GeneID:7144982;gbkey=CDS;product=8-amino-7-oxononanoate synthase;protein_id=YP_002404354.1;transl_table=11
NC_011748.1	RefSeq	gene	3478758	3479918	.	-	.	ID=gene3463;Name=EC55989_3395;Dbxref=GeneID:7144983;gbkey=Gene;locus_tag=EC55989_3395
NC_011748.1	RefSeq	CDS	3478758	3479918	.	-	0	ID=cds3208;Name=YP_002404355.1;Parent=gene3463;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404355.1,GeneID:7144983;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404355.1;transl_table=11
NC_011748.1	RefSeq	gene	3479834	3480904	.	-	.	ID=gene3464;Name=EC55989_3396;Dbxref=GeneID:7144984;gbkey=Gene;locus_tag=EC55989_3396
NC_011748.1	RefSeq	CDS	3479834	3480904	.	-	0	ID=cds3209;Name=YP_002404356.1;Parent=gene3464;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404356.1,GeneID:7144984;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404356.1;transl_table=11
NC_011748.1	RefSeq	gene	3480935	3481498	.	-	.	ID=gene3465;Name=EC55989_3397;Dbxref=GeneID:7144985;gbkey=Gene;locus_tag=EC55989_3397
NC_011748.1	RefSeq	CDS	3480935	3481498	.	-	0	ID=cds3210;Name=YP_002404357.1;Parent=gene3465;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pr :  regulator;Dbxref=Genbank:YP_002404357.1,GeneID:7144985;gbkey=CDS;product=transcriptional regulator;protein_id=YP_002404357.1;transl_table=11
NC_011748.1	RefSeq	gene	3481507	3482331	.	-	.	ID=gene3466;Name=EC55989_3398;Dbxref=GeneID:7144986;gbkey=Gene;locus_tag=EC55989_3398
NC_011748.1	RefSeq	CDS	3481507	3482331	.	-	0	ID=cds3211;Name=YP_002404358.1;Parent=gene3466;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404358.1,GeneID:7144986;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404358.1;transl_table=11
NC_011748.1	RefSeq	gene	3482331	3483680	.	-	.	ID=gene3467;Name=EC55989_3399;Dbxref=GeneID:7144987;gbkey=Gene;locus_tag=EC55989_3399
NC_011748.1	RefSeq	CDS	3482331	3483680	.	-	0	ID=cds3212;Name=YP_002404359.1;Parent=gene3467;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002404359.1,GeneID:7144987;gbkey=CDS;product=membrane protein%2C conserved protein;protein_id=YP_002404359.1;transl_table=11
NC_011748.1	RefSeq	gene	3483726	3484484	.	-	.	ID=gene3468;Name=yghR;Dbxref=GeneID:7144988;gbkey=Gene;gene=yghR;locus_tag=EC55989_3400
NC_011748.1	RefSeq	CDS	3483726	3484484	.	-	0	ID=cds3213;Name=YP_002404360.1;Parent=gene3468;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404360.1,GeneID:7144988;gbkey=CDS;product=nucleoside triphosphate hydrolase domain;protein_id=YP_002404360.1;transl_table=11
NC_011748.1	RefSeq	gene	3484516	3485229	.	-	.	ID=gene3469;Name=yghS;Dbxref=GeneID:7148885;gbkey=Gene;gene=yghS;locus_tag=EC55989_3401
NC_011748.1	RefSeq	CDS	3484516	3485229	.	-	0	ID=cds3214;Name=YP_002404361.1;Parent=gene3469;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404361.1,GeneID:7148885;gbkey=CDS;product=nucleoside triphosphate hydrolase domain;protein_id=YP_002404361.1;transl_table=11
NC_011748.1	RefSeq	gene	3485403	3486095	.	+	.	ID=gene3470;Name=yghT;Dbxref=GeneID:7148886;gbkey=Gene;gene=yghT;locus_tag=EC55989_3402
NC_011748.1	RefSeq	CDS	3485403	3486095	.	+	0	ID=cds3215;Name=YP_002404362.1;Parent=gene3470;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404362.1,GeneID:7148886;gbkey=CDS;product=nucleoside triphosphate hydrolase domain;protein_id=YP_002404362.1;transl_table=11
NC_011748.1	RefSeq	gene	3486144	3487643	.	-	.	ID=gene3471;Name=pitB;Dbxref=GeneID:7148887;gbkey=Gene;gene=pitB;locus_tag=EC55989_3403
NC_011748.1	RefSeq	CDS	3486144	3487643	.	-	0	ID=cds3216;Name=YP_002404363.1;Parent=gene3471;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 21336523%2C 21382172%2C 7775463%3B Product type t : transporter;Dbxref=Genbank:YP_002404363.1,GeneID:7148887;gbkey=CDS;product=phosphate transporter;protein_id=YP_002404363.1;transl_table=11
NC_011748.1	RefSeq	gene	3487935	3489794	.	-	.	ID=gene3472;Name=gss;Dbxref=GeneID:7147192;gbkey=Gene;gene=gss;locus_tag=EC55989_3404
NC_011748.1	RefSeq	CDS	3487935	3489794	.	-	0	ID=cds3217;Name=YP_002404364.1;Parent=gene3472;Note=catalyzes the formation of glutathionylspermidine from glutathione and spermidine%3B also catalyzes the reverse reaction;Dbxref=Genbank:YP_002404364.1,GeneID:7147192;gbkey=CDS;product=bifunctional glutathionylspermidine amidase%2Fglutathionylspermidine synthetase;protein_id=YP_002404364.1;transl_table=11
NC_011748.1	RefSeq	gene	3489999	3490865	.	+	.	ID=gene3473;Name=yghU;Dbxref=GeneID:7146376;gbkey=Gene;gene=yghU;locus_tag=EC55989_3405
NC_011748.1	RefSeq	CDS	3489999	3490865	.	+	0	ID=cds3218;Name=YP_002404365.1;Parent=gene3473;Note=YghU%3B B2989%3B one of eight  glutathione transferase proteins from E. coli;Dbxref=Genbank:YP_002404365.1,GeneID:7146376;gbkey=CDS;product=glutathione S-transferase;protein_id=YP_002404365.1;transl_table=11
NC_011748.1	RefSeq	gene	3491165	3492145	.	+	.	ID=gene3474;Name=EC55989_3406;Dbxref=GeneID:7148888;gbkey=Gene;locus_tag=EC55989_3406
NC_011748.1	RefSeq	CDS	3491165	3492145	.	+	0	ID=cds3219;Name=YP_002404366.1;Parent=gene3474;Note=Evidence 2b : Function of strongly homologous gene%3B Product type e : enzyme;Dbxref=Genbank:YP_002404366.1,GeneID:7148888;gbkey=CDS;product=transposase%2C IS110 family;protein_id=YP_002404366.1;transl_table=11
NC_011748.1	RefSeq	gene	3492267	3492515	.	-	.	ID=gene3475;Name=hybG;Dbxref=GeneID:7144989;gbkey=Gene;gene=hybG;locus_tag=EC55989_3407
NC_011748.1	RefSeq	CDS	3492267	3492515	.	-	0	ID=cds3220;Name=YP_002404367.1;Parent=gene3475;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 92215587%2C 94292472%2C 8021226%3B Product type pf :  factor;Dbxref=Genbank:YP_002404367.1,GeneID:7144989;gbkey=CDS;product=hydrogenase 2 accessory protein HypG;protein_id=YP_002404367.1;transl_table=11
NC_011748.1	RefSeq	gene	3492528	3492869	.	-	.	ID=gene3476;Name=hybF;Dbxref=GeneID:7146494;gbkey=Gene;gene=hybF;locus_tag=EC55989_3408
NC_011748.1	RefSeq	CDS	3492528	3492869	.	-	0	ID=cds3221;Name=YP_002404368.1;Parent=gene3476;Note=plays a role in hydrogenase nickel cofactor insertion;Dbxref=Genbank:YP_002404368.1,GeneID:7146494;gbkey=CDS;product=hydrogenase nickel incorporation protein HybF;protein_id=YP_002404368.1;transl_table=11
NC_011748.1	RefSeq	gene	3492862	3493350	.	-	.	ID=gene3477;Name=hybE;Dbxref=GeneID:7146493;gbkey=Gene;gene=hybE;locus_tag=EC55989_3409
NC_011748.1	RefSeq	CDS	3492862	3493350	.	-	0	ID=cds3222;Name=YP_002404369.1;Parent=gene3477;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 94292472%2C 8021226%3B Product type f : factor;Dbxref=Genbank:YP_002404369.1,GeneID:7146493;gbkey=CDS;product=hydrogenase 2-specific chaperone;protein_id=YP_002404369.1;transl_table=11
NC_011748.1	RefSeq	gene	3493343	3493837	.	-	.	ID=gene3478;Name=hybD;Dbxref=GeneID:7146492;gbkey=Gene;gene=hybD;locus_tag=EC55989_3410
NC_011748.1	RefSeq	CDS	3493343	3493837	.	-	0	ID=cds3223;Name=YP_002404370.1;Parent=gene3478;Note=protease responsible for the cleavage of a 15 amino acid peptide from the C-terminal end of the large subunit of hydrogenase 2 %28HybC%29;Dbxref=Genbank:YP_002404370.1,GeneID:7146492;gbkey=CDS;product=hydrogenase 2 maturation endopeptidase;protein_id=YP_002404370.1;transl_table=11
NC_011748.1	RefSeq	gene	3493837	3495540	.	-	.	ID=gene3479;Name=hybC;Dbxref=GeneID:7146491;gbkey=Gene;gene=hybC;locus_tag=EC55989_3411
NC_011748.1	RefSeq	CDS	3493837	3495540	.	-	0	ID=cds3224;Name=YP_002404371.1;Parent=gene3479;Note=involved in hydrogen uptake;Dbxref=Genbank:YP_002404371.1,GeneID:7146491;gbkey=CDS;product=hydrogenase 2 large subunit;protein_id=YP_002404371.1;transl_table=11
NC_011748.1	RefSeq	gene	3495537	3496715	.	-	.	ID=gene3480;Name=hybB;Dbxref=GeneID:7146490;gbkey=Gene;gene=hybB;locus_tag=EC55989_3412
NC_011748.1	RefSeq	CDS	3495537	3496715	.	-	0	ID=cds3225;Name=YP_002404372.1;Parent=gene3480;Note=HybB%3B cytochrome b subunit of the hydrogenase 2 enzyme%2C composed of HybA%2C B%2C C%2C and O subunits;Dbxref=Genbank:YP_002404372.1,GeneID:7146490;gbkey=CDS;product=hydrogenase 2 b cytochrome subunit;protein_id=YP_002404372.1;transl_table=11
NC_011748.1	RefSeq	gene	3496705	3497691	.	-	.	ID=gene3481;Name=hybA;Dbxref=GeneID:7146489;gbkey=Gene;gene=hybA;locus_tag=EC55989_3413
NC_011748.1	RefSeq	CDS	3496705	3497691	.	-	0	ID=cds3226;Name=YP_002404373.1;Parent=gene3481;Note=Fe-S ferrodoxin type component%3B participates in the periplasmic electron-transferring activity of hydrogenase 2;Dbxref=Genbank:YP_002404373.1,GeneID:7146489;gbkey=CDS;product=hydrogenase 2 protein HybA;protein_id=YP_002404373.1;transl_table=11
NC_011748.1	RefSeq	gene	3497694	3498812	.	-	.	ID=gene3482;Name=hybO;Dbxref=GeneID:7146488;gbkey=Gene;gene=hybO;locus_tag=EC55989_3414
NC_011748.1	RefSeq	CDS	3497694	3498812	.	-	0	ID=cds3227;Name=YP_002404374.1;Parent=gene3482;Note=involved in hydrogen uptake;Dbxref=Genbank:YP_002404374.1,GeneID:7146488;gbkey=CDS;product=hydrogenase 2 small subunit;protein_id=YP_002404374.1;transl_table=11
NC_011748.1	RefSeq	gene	3498819	3499004	.	-	.	ID=gene3483;Name=EC55989_3415;Dbxref=GeneID:7146495;gbkey=Gene;locus_tag=EC55989_3415
NC_011748.1	RefSeq	CDS	3498819	3499004	.	-	0	ID=cds3228;Name=YP_002404375.1;Parent=gene3483;Note=Evidence 6 : Doubtful CDS;Dbxref=Genbank:YP_002404375.1,GeneID:7146495;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404375.1;transl_table=11
NC_011748.1	RefSeq	gene	3499001	3499288	.	-	.	ID=gene3484;Name=yghW;Dbxref=GeneID:7144990;gbkey=Gene;gene=yghW;locus_tag=EC55989_3416
NC_011748.1	RefSeq	CDS	3499001	3499288	.	-	0	ID=cds3229;Name=YP_002404376.1;Parent=gene3484;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404376.1,GeneID:7144990;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404376.1;transl_table=11
NC_011748.1	RefSeq	gene	3499407	3500333	.	-	.	ID=gene3485;Name=EC55989_3417;Dbxref=GeneID:7148889;gbkey=Gene;locus_tag=EC55989_3417
NC_011748.1	RefSeq	CDS	3499407	3500333	.	-	0	ID=cds3230;Name=YP_002404377.1;Parent=gene3485;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404377.1,GeneID:7148889;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404377.1;transl_table=11
NC_011748.1	RefSeq	gene	3500451	3501491	.	+	.	ID=gene3486;Name=yghZ;Dbxref=GeneID:7144991;gbkey=Gene;gene=yghZ;locus_tag=EC55989_3419
NC_011748.1	RefSeq	CDS	3500451	3501491	.	+	0	ID=cds3231;Name=YP_002404378.1;Parent=gene3486;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 12583903%3B Product type e : enzyme;Dbxref=Genbank:YP_002404378.1,GeneID:7144991;gbkey=CDS;product=aldo%2Fketo reductase;protein_id=YP_002404378.1;transl_table=11
NC_011748.1	RefSeq	gene	3501531	3502025	.	-	.	ID=gene3487;Name=yqhA;Dbxref=GeneID:7148890;gbkey=Gene;gene=yqhA;locus_tag=EC55989_3420
NC_011748.1	RefSeq	CDS	3501531	3502025	.	-	0	ID=cds3232;Name=YP_002404379.1;Parent=gene3487;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002404379.1,GeneID:7148890;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404379.1;transl_table=11
NC_011748.1	RefSeq	gene	3502216	3503100	.	+	.	ID=gene3488;Name=yghA;Dbxref=GeneID:7149413;gbkey=Gene;gene=yghA;locus_tag=EC55989_3421
NC_011748.1	RefSeq	CDS	3502216	3503100	.	+	0	ID=cds3233;Name=YP_002404380.1;Parent=gene3488;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002404380.1,GeneID:7149413;gbkey=CDS;product=oxidoreductase;protein_id=YP_002404380.1;transl_table=11
NC_011748.1	RefSeq	gene	3503139	3503564	.	-	.	ID=gene3489;Name=exbD;Dbxref=GeneID:7148877;gbkey=Gene;gene=exbD;locus_tag=EC55989_3422
NC_011748.1	RefSeq	CDS	3503139	3503564	.	-	0	ID=cds3234;Name=YP_002404381.1;Parent=gene3489;Note=membrane spanning protein in TonB-ExbB-ExbD complex%3B involved in the tonB-independent energy-dependent transport iron-siderophore complexes and vitamin B12 into the cell;Dbxref=Genbank:YP_002404381.1,GeneID:7148877;gbkey=CDS;product=biopolymer transport protein ExbD;protein_id=YP_002404381.1;transl_table=11
NC_011748.1	RefSeq	gene	3503571	3504305	.	-	.	ID=gene3490;Name=exbB;Dbxref=GeneID:7146041;gbkey=Gene;gene=exbB;locus_tag=EC55989_3423
NC_011748.1	RefSeq	CDS	3503571	3504305	.	-	0	ID=cds3235;Name=YP_002404382.1;Parent=gene3490;Note=membrane spanning protein in TonB-ExbB-ExbD complex%3B involved in the tonB-independent energy-dependent transport iron-siderophore complexes and vitamin B12 into the cell;Dbxref=Genbank:YP_002404382.1,GeneID:7146041;gbkey=CDS;product=biopolymer transport protein ExbB;protein_id=YP_002404382.1;transl_table=11
NC_011748.1	RefSeq	gene	3504298	3504453	.	-	.	ID=gene3491;Name=EC55989_3424;Dbxref=GeneID:7146040;gbkey=Gene;locus_tag=EC55989_3424
NC_011748.1	RefSeq	CDS	3504298	3504453	.	-	0	ID=cds3236;Name=YP_002404383.1;Parent=gene3491;Note=Evidence 6 : Doubtful CDS;Dbxref=Genbank:YP_002404383.1,GeneID:7146040;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404383.1;transl_table=11
NC_011748.1	RefSeq	gene	3504557	3505744	.	+	.	ID=gene3492;Name=metC;Dbxref=GeneID:7144992;gbkey=Gene;gene=metC;locus_tag=EC55989_3425
NC_011748.1	RefSeq	CDS	3504557	3505744	.	+	0	ID=cds3237;Name=YP_002404384.1;Parent=gene3492;Note=catalyzes the formation of L-homocysteine from cystathionine;Dbxref=Genbank:YP_002404384.1,GeneID:7144992;gbkey=CDS;product=cystathionine beta-lyase;protein_id=YP_002404384.1;transl_table=11
NC_011748.1	RefSeq	gene	3505884	3506543	.	+	.	ID=gene3493;Name=yghB;Dbxref=GeneID:7146826;gbkey=Gene;gene=yghB;locus_tag=EC55989_3426
NC_011748.1	RefSeq	CDS	3505884	3506543	.	+	0	ID=cds3238;Name=YP_002404385.1;Parent=gene3493;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002404385.1,GeneID:7146826;gbkey=CDS;product=inner membrane protein;protein_id=YP_002404385.1;transl_table=11
NC_011748.1	RefSeq	gene	3506583	3507539	.	-	.	ID=gene3494;Name=yqhC;Dbxref=GeneID:7148878;gbkey=Gene;gene=yqhC;locus_tag=EC55989_3427
NC_011748.1	RefSeq	CDS	3506583	3507539	.	-	0	ID=cds3239;Name=YP_002404386.1;Parent=gene3494;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pr :  regulator;Dbxref=Genbank:YP_002404386.1,GeneID:7148878;gbkey=CDS;product=DNA-binding transcriptional regulator;protein_id=YP_002404386.1;transl_table=11
NC_011748.1	RefSeq	gene	3507676	3508839	.	+	.	ID=gene3495;Name=yqhD;Dbxref=GeneID:7149414;gbkey=Gene;gene=yqhD;locus_tag=EC55989_3428
NC_011748.1	RefSeq	CDS	3507676	3508839	.	+	0	ID=cds3240;Name=YP_002404387.1;Parent=gene3495;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 15327949%3B Product type e : enzyme;Dbxref=Genbank:YP_002404387.1,GeneID:7149414;gbkey=CDS;product=alcohol dehydrogenase;protein_id=YP_002404387.1;transl_table=11
NC_011748.1	RefSeq	gene	3508944	3509771	.	+	.	ID=gene3496;Name=dkgA;Dbxref=GeneID:7149415;gbkey=Gene;gene=dkgA;locus_tag=EC55989_3429
NC_011748.1	RefSeq	CDS	3508944	3509771	.	+	0	ID=cds3241;Name=YP_002404388.1;Parent=gene3496;Note=methylglyoxal reductase%2F%23-keto ester reductase%3B catalyzes the reduction of 2%2C5-diketo-D-gluconic acid to 2-keto-L-gulonic acid%3B also catalyzes the reduction of methylglyoxal%2C ethyl-2-methylacetoacetate and ethyl-acetoacetate;Dbxref=Genbank:YP_002404388.1,GeneID:7149415;gbkey=CDS;product=2%2C5-diketo-D-gluconate reductase A;protein_id=YP_002404388.1;transl_table=11
NC_011748.1	RefSeq	gene	3509971	3510897	.	+	.	ID=gene3497;Name=yqhG;Dbxref=GeneID:7145924;gbkey=Gene;gene=yqhG;locus_tag=EC55989_3430
NC_011748.1	RefSeq	CDS	3509971	3510897	.	+	0	ID=cds3242;Name=YP_002404389.1;Parent=gene3497;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404389.1,GeneID:7145924;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404389.1;transl_table=11
NC_011748.1	RefSeq	gene	3510948	3511205	.	+	.	ID=gene3498;Name=yqhH;Dbxref=GeneID:7149416;gbkey=Gene;gene=yqhH;locus_tag=EC55989_3431
NC_011748.1	RefSeq	CDS	3510948	3511205	.	+	0	ID=cds3243;Name=YP_002404390.1;Parent=gene3498;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type lp : lipoprotein;Dbxref=Genbank:YP_002404390.1,GeneID:7149416;gbkey=CDS;product=outer membrane lipoprotein;protein_id=YP_002404390.1;transl_table=11
NC_011748.1	RefSeq	gene	3511248	3513467	.	-	.	ID=gene3499;Name=ygiQ;Dbxref=GeneID:7149417;gbkey=Gene;gene=ygiQ;locus_tag=EC55989_3432
NC_011748.1	RefSeq	CDS	3511248	3513467	.	-	0	ID=cds3244;Name=YP_002404391.1;Parent=gene3499;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404391.1,GeneID:7149417;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404391.1;transl_table=11
NC_011748.1	RefSeq	gene	3513578	3514990	.	-	.	ID=gene3500;Name=sufI;Dbxref=GeneID:7148898;gbkey=Gene;gene=sufI;locus_tag=EC55989_3433
NC_011748.1	RefSeq	CDS	3513578	3514990	.	-	0	ID=cds3245;Name=YP_002404392.1;Parent=gene3500;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 88314889%2C 1557036%2C 9298646%3B Product type r : regulator;Dbxref=Genbank:YP_002404392.1,GeneID:7148898;gbkey=CDS;product=repressor protein for FtsI;protein_id=YP_002404392.1;transl_table=11
NC_011748.1	RefSeq	gene	3515065	3515802	.	-	.	ID=gene3501;Name=plsC;Dbxref=GeneID:7147735;gbkey=Gene;gene=plsC;locus_tag=EC55989_3434
NC_011748.1	RefSeq	CDS	3515065	3515802	.	-	0	ID=cds3246;Name=YP_002404393.1;Parent=gene3501;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 92212294%2C 1557036%3B Product type e : enzyme;Dbxref=Genbank:YP_002404393.1,GeneID:7147735;gbkey=CDS;product=1-acyl-sn-glycerol-3-phosphate acyltransferase;protein_id=YP_002404393.1;transl_table=11
NC_011748.1	RefSeq	gene	3515850	3516005	.	-	.	ID=gene3502;Name=EC55989_3435;Dbxref=GeneID:7147196;gbkey=Gene;locus_tag=EC55989_3435
NC_011748.1	RefSeq	CDS	3515850	3516005	.	-	0	ID=cds3247;Name=YP_002404394.1;Parent=gene3502;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404394.1,GeneID:7147196;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404394.1;transl_table=11
NC_011748.1	RefSeq	gene	3516035	3518293	.	-	.	ID=gene3503;Name=parC;Dbxref=GeneID:7144993;gbkey=Gene;gene=parC;locus_tag=EC55989_3436
NC_011748.1	RefSeq	CDS	3516035	3518293	.	-	0	ID=cds3248;Name=YP_002404395.1;Parent=gene3503;Note=decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling;Dbxref=Genbank:YP_002404395.1,GeneID:7144993;gbkey=CDS;product=DNA topoisomerase IV subunit A;protein_id=YP_002404395.1;transl_table=11
NC_011748.1	RefSeq	gene	3518839	3519321	.	-	.	ID=gene3504;Name=ygiV;Dbxref=GeneID:7147115;gbkey=Gene;gene=ygiV;locus_tag=EC55989_3439
NC_011748.1	RefSeq	CDS	3518839	3519321	.	-	0	ID=cds3249;Name=YP_002404396.1;Parent=gene3504;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pr :  regulator;Dbxref=Genbank:YP_002404396.1,GeneID:7147115;gbkey=CDS;product=transcriptional regulator;protein_id=YP_002404396.1;transl_table=11
NC_011748.1	RefSeq	gene	3519374	3519766	.	-	.	ID=gene3505;Name=ygiW;Dbxref=GeneID:7148899;gbkey=Gene;gene=ygiW;locus_tag=EC55989_3440
NC_011748.1	RefSeq	CDS	3519374	3519766	.	-	0	ID=cds3250;Name=YP_002404397.1;Parent=gene3505;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 9298646;Dbxref=Genbank:YP_002404397.1,GeneID:7148899;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404397.1;transl_table=11
NC_011748.1	RefSeq	gene	3519918	3520577	.	+	.	ID=gene3506;Name=qseB;Dbxref=GeneID:7148900;gbkey=Gene;gene=qseB;locus_tag=EC55989_3441
NC_011748.1	RefSeq	CDS	3519918	3520577	.	+	0	ID=cds3251;Name=YP_002404398.1;Parent=gene3506;Note=response regulator in two-component regulatory system with QseC%3B regulates FlhCD which is the master regulator for flagella and motility genes;Dbxref=Genbank:YP_002404398.1,GeneID:7148900;gbkey=CDS;product=DNA-binding transcriptional regulator QseB;protein_id=YP_002404398.1;transl_table=11
NC_011748.1	RefSeq	gene	3520574	3521923	.	+	.	ID=gene3507;Name=qseC;Dbxref=GeneID:7147329;gbkey=Gene;gene=qseC;locus_tag=EC55989_3442
NC_011748.1	RefSeq	CDS	3520574	3521923	.	+	0	ID=cds3252;Name=YP_002404399.1;Parent=gene3507;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 21927389%3B Product type r : regulator;Dbxref=Genbank:YP_002404399.1,GeneID:7147329;gbkey=CDS;product=sensor protein QseC;protein_id=YP_002404399.1;transl_table=11
NC_011748.1	RefSeq	gene	3521969	3522301	.	-	.	ID=gene3508;Name=ygiZ;Dbxref=GeneID:7147330;gbkey=Gene;gene=ygiZ;locus_tag=EC55989_3443
NC_011748.1	RefSeq	CDS	3521969	3522301	.	-	0	ID=cds3253;Name=YP_002404400.1;Parent=gene3508;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002404400.1,GeneID:7147330;gbkey=CDS;product=inner membrane protein;protein_id=YP_002404400.1;transl_table=11
NC_011748.1	RefSeq	gene	3522620	3523201	.	+	.	ID=gene3509;Name=mdaB;Dbxref=GeneID:7148901;gbkey=Gene;gene=mdaB;locus_tag=EC55989_3444
NC_011748.1	RefSeq	CDS	3522620	3523201	.	+	0	ID=cds3254;Name=YP_002404401.1;Parent=gene3509;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 96004656%2C 96217538%3B Product type c : carrier;Dbxref=Genbank:YP_002404401.1,GeneID:7148901;gbkey=CDS;product=NADPH quinone reductase;protein_id=YP_002404401.1;transl_table=11
NC_011748.1	RefSeq	gene	3523232	3523546	.	+	.	ID=gene3510;Name=ygiN;Dbxref=GeneID:7146793;gbkey=Gene;gene=ygiN;locus_tag=EC55989_3445
NC_011748.1	RefSeq	CDS	3523232	3523546	.	+	0	ID=cds3255;Name=YP_002404402.1;Parent=gene3510;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 10493123%2C 9298646%2C 9600841%2C 9868784%3B Product type e : enzyme;Dbxref=Genbank:YP_002404402.1,GeneID:7146793;gbkey=CDS;product=quinol monooxygenase;protein_id=YP_002404402.1;transl_table=11
NC_011748.1	RefSeq	gene	3523594	3525486	.	-	.	ID=gene3511;Name=parE;Dbxref=GeneID:7148896;gbkey=Gene;gene=parE;locus_tag=EC55989_3446
NC_011748.1	RefSeq	CDS	3523594	3525486	.	-	0	ID=cds3256;Name=YP_002404403.1;Parent=gene3511;Note=decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling;Dbxref=Genbank:YP_002404403.1,GeneID:7148896;gbkey=CDS;product=DNA topoisomerase IV subunit B;protein_id=YP_002404403.1;transl_table=11
NC_011748.1	RefSeq	gene	3525515	3526096	.	-	.	ID=gene3512;Name=yqiA;Dbxref=GeneID:7147116;gbkey=Gene;gene=yqiA;locus_tag=EC55989_3447
NC_011748.1	RefSeq	CDS	3525515	3526096	.	-	0	ID=cds3257;Name=YP_002404404.1;Parent=gene3512;Note=Displays esterase activity toward palmitoyl-CoA and pNP-butyrate;Dbxref=Genbank:YP_002404404.1,GeneID:7147116;gbkey=CDS;product=esterase YqiA;protein_id=YP_002404404.1;transl_table=11
NC_011748.1	RefSeq	gene	3526096	3526923	.	-	.	ID=gene3513;Name=cpdA;Dbxref=GeneID:7149418;gbkey=Gene;gene=cpdA;locus_tag=EC55989_3448
NC_011748.1	RefSeq	CDS	3526096	3526923	.	-	0	ID=cds3258;Name=YP_002404405.1;Parent=gene3513;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 96411758%3B Product type e : enzyme;Dbxref=Genbank:YP_002404405.1,GeneID:7149418;gbkey=CDS;product=cyclic 3%27%2C5%27-adenosine monophosphate phosphodiesterase;protein_id=YP_002404405.1;transl_table=11
NC_011748.1	RefSeq	gene	3526948	3527370	.	-	.	ID=gene3514;Name=yqiB;Dbxref=GeneID:7145744;gbkey=Gene;gene=yqiB;locus_tag=EC55989_3449
NC_011748.1	RefSeq	CDS	3526948	3527370	.	-	0	ID=cds3259;Name=YP_002404406.1;Parent=gene3514;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002404406.1,GeneID:7145744;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404406.1;transl_table=11
NC_011748.1	RefSeq	gene	3527371	3528000	.	-	.	ID=gene3515;Name=nudF;Dbxref=GeneID:7149419;gbkey=Gene;gene=nudF;locus_tag=EC55989_3450
NC_011748.1	RefSeq	CDS	3527371	3528000	.	-	0	ID=cds3260;Name=YP_002404407.1;Parent=gene3515;Note=ADP-sugar pyrophosphatase%3B catalyzes the formation of D-ribose 5-phosphate from ADP-ribose%3B can also act on ADP-mannose and ADP-glucose;Dbxref=Genbank:YP_002404407.1,GeneID:7149419;gbkey=CDS;product=ADP-ribose pyrophosphatase;protein_id=YP_002404407.1;transl_table=11
NC_011748.1	RefSeq	gene	3528205	3529686	.	+	.	ID=gene3516;Name=tolC;Dbxref=GeneID:7147040;gbkey=Gene;gene=tolC;locus_tag=EC55989_3451
NC_011748.1	RefSeq	CDS	3528205	3529686	.	+	0	ID=cds3261;Name=YP_002404408.1;Parent=gene3516;Note=trimeric outer membrane protein involved in efflux of hydrophobic%2Famphipathic molecules%3B functions with a number of efflux systems in the inner membrane to transport molecules out of the cell;Dbxref=Genbank:YP_002404408.1,GeneID:7147040;gbkey=CDS;product=outer membrane channel protein;protein_id=YP_002404408.1;transl_table=11
NC_011748.1	RefSeq	gene	3529930	3530505	.	+	.	ID=gene3517;Name=ygiB;Dbxref=GeneID:7147814;gbkey=Gene;gene=ygiB;locus_tag=EC55989_3452
NC_011748.1	RefSeq	CDS	3529930	3530505	.	+	0	ID=cds3262;Name=YP_002404409.1;Parent=gene3517;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002404409.1,GeneID:7147814;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404409.1;transl_table=11
NC_011748.1	RefSeq	gene	3530511	3531671	.	+	.	ID=gene3518;Name=ygiC;Dbxref=GeneID:7148891;gbkey=Gene;gene=ygiC;locus_tag=EC55989_3453
NC_011748.1	RefSeq	CDS	3530511	3531671	.	+	0	ID=cds3263;Name=YP_002404410.1;Parent=gene3518;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002404410.1,GeneID:7148891;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404410.1;transl_table=11
NC_011748.1	RefSeq	gene	3531709	3532524	.	-	.	ID=gene3519;Name=zupT;Dbxref=GeneID:7148892;gbkey=Gene;gene=zupT;locus_tag=EC55989_3454
NC_011748.1	RefSeq	CDS	3531709	3532524	.	-	0	ID=cds3264;Name=YP_002404411.1;Parent=gene3519;Note=seems to be involved in biofilm formation%3B in asymptomatic bacteriuria E. coli strains 83972 and VR50%2C the ygiD gene is upregulated during biofilm formation in urine;Dbxref=Genbank:YP_002404411.1,GeneID:7148892;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404411.1;transl_table=11
NC_011748.1	RefSeq	gene	3532640	3533413	.	+	.	ID=gene3520;Name=ygiE;Dbxref=GeneID:7149498;gbkey=Gene;gene=ygiE;locus_tag=EC55989_3455
NC_011748.1	RefSeq	CDS	3532640	3533413	.	+	0	ID=cds3265;Name=YP_002404412.1;Parent=gene3520;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 11790762%2C 1314093%3B Product type t : transporter;Dbxref=Genbank:YP_002404412.1,GeneID:7149498;gbkey=CDS;product=zinc transporter ZupT;protein_id=YP_002404412.1;transl_table=11
NC_011748.1	RefSeq	gene	3533471	3533665	.	-	.	ID=gene3521;Name=EC55989_3456;Dbxref=GeneID:7148893;gbkey=Gene;locus_tag=EC55989_3456
NC_011748.1	RefSeq	CDS	3533471	3533665	.	-	0	ID=cds3266;Name=YP_002404413.1;Parent=gene3521;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404413.1,GeneID:7148893;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404413.1;transl_table=11
NC_011748.1	RefSeq	gene	3533902	3534555	.	-	.	ID=gene3522;Name=ribB;Dbxref=GeneID:7144994;gbkey=Gene;gene=ribB;locus_tag=EC55989_3457
NC_011748.1	RefSeq	CDS	3533902	3534555	.	-	0	ID=cds3267;Name=YP_002404414.1;Parent=gene3522;Note=DHBP synthase%3B functions during riboflavin biosynthesis;Dbxref=Genbank:YP_002404414.1,GeneID:7144994;gbkey=CDS;product=3%2C4-dihydroxy-2-butanone 4-phosphate synthase;protein_id=YP_002404414.1;transl_table=11
NC_011748.1	RefSeq	gene	3534659	3534807	.	-	.	ID=gene3523;Name=EC55989_misc_RNA_77;Dbxref=GeneID:7147410;gbkey=Gene;locus_tag=EC55989_misc_RNA_77
NC_011748.1	RefSeq	transcript	3534659	3534807	.	-	.	ID=rna144;Parent=gene3523;Dbxref=GeneID:7147410;gbkey=misc_RNA;product=FMN
NC_011748.1	RefSeq	exon	3534659	3534807	.	-	.	ID=id294;Parent=rna144;Dbxref=GeneID:7147410;gbkey=misc_RNA;product=FMN
NC_011748.1	RefSeq	gene	3534929	3535219	.	+	.	ID=gene3524;Name=yqiC;Dbxref=GeneID:7145311;gbkey=Gene;gene=yqiC;locus_tag=EC55989_3458
NC_011748.1	RefSeq	CDS	3534929	3535219	.	+	0	ID=cds3268;Name=YP_002404415.1;Parent=gene3524;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404415.1,GeneID:7145311;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404415.1;transl_table=11
NC_011748.1	RefSeq	gene	3535502	3536053	.	+	.	ID=gene3525;Name=ygiL;Dbxref=GeneID:7149420;gbkey=Gene;gene=ygiL;locus_tag=EC55989_3459
NC_011748.1	RefSeq	CDS	3535502	3536053	.	+	0	ID=cds3269;Name=YP_002404416.1;Parent=gene3525;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type ps :  structure;Dbxref=Genbank:YP_002404416.1,GeneID:7149420;gbkey=CDS;product=fimbrial protein;protein_id=YP_002404416.1;transl_table=11
NC_011748.1	RefSeq	gene	3536104	3538617	.	+	.	ID=gene3526;Name=yqiG;Dbxref=GeneID:7148895;gbkey=Gene;gene=yqiG;locus_tag=EC55989_3460
NC_011748.1	RefSeq	CDS	3536104	3538617	.	+	0	ID=cds3270;Name=YP_002404417.1;Parent=gene3526;Note=Evidence 2b : Function of strongly homologous gene%3B Product type f : factor;Dbxref=Genbank:YP_002404417.1,GeneID:7148895;gbkey=CDS;product=outer membrane usher protein;protein_id=YP_002404417.1;transl_table=11
NC_011748.1	RefSeq	gene	3538633	3539382	.	+	.	ID=gene3527;Name=yqiH;Dbxref=GeneID:7149421;gbkey=Gene;gene=yqiH;locus_tag=EC55989_3461
NC_011748.1	RefSeq	CDS	3538633	3539382	.	+	0	ID=cds3271;Name=YP_002404418.1;Parent=gene3527;Note=Evidence 2b : Function of strongly homologous gene%3B Product type f : factor;Dbxref=Genbank:YP_002404418.1,GeneID:7149421;gbkey=CDS;product=periplasmic pilin chaperone;protein_id=YP_002404418.1;transl_table=11
NC_011748.1	RefSeq	gene	3539384	3540448	.	+	.	ID=gene3528;Name=yqiI;Dbxref=GeneID:7149422;gbkey=Gene;gene=yqiI;locus_tag=EC55989_3462
NC_011748.1	RefSeq	CDS	3539384	3540448	.	+	0	ID=cds3272;Name=YP_002404419.1;Parent=gene3528;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404419.1,GeneID:7149422;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404419.1;transl_table=11
NC_011748.1	RefSeq	gene	3540491	3540691	.	-	.	ID=gene3529;Name=glgS;Dbxref=GeneID:7149423;gbkey=Gene;gene=glgS;locus_tag=EC55989_3463
NC_011748.1	RefSeq	CDS	3540491	3540691	.	-	0	ID=cds3273;Name=YP_002404420.1;Parent=gene3529;Note=Involved in glycogen synthesis. May be involved in glycogen priming;Dbxref=Genbank:YP_002404420.1,GeneID:7149423;gbkey=CDS;product=glycogen synthesis protein GlgS;protein_id=YP_002404420.1;transl_table=11
NC_011748.1	RefSeq	gene	3540960	3541589	.	+	.	ID=gene3530;Name=yqiJ;Dbxref=GeneID:7146296;gbkey=Gene;gene=yqiJ;locus_tag=EC55989_3464
NC_011748.1	RefSeq	CDS	3540960	3541589	.	+	0	ID=cds3274;Name=YP_002404421.1;Parent=gene3530;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002404421.1,GeneID:7146296;gbkey=CDS;product=inner membrane protein;protein_id=YP_002404421.1;transl_table=11
NC_011748.1	RefSeq	gene	3541616	3543277	.	+	.	ID=gene3531;Name=yqiK;Dbxref=GeneID:7149424;gbkey=Gene;gene=yqiK;locus_tag=EC55989_3465
NC_011748.1	RefSeq	CDS	3541616	3543277	.	+	0	ID=cds3275;Name=YP_002404422.1;Parent=gene3531;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404422.1,GeneID:7149424;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404422.1;transl_table=11
NC_011748.1	RefSeq	gene	3543501	3543650	.	-	.	ID=gene3532;Name=rygD;Dbxref=GeneID:7149425;gbkey=Gene;gene=rygD;locus_tag=EC55989_misc_RNA_78
NC_011748.1	RefSeq	transcript	3543501	3543650	.	-	.	ID=rna145;Parent=gene3532;Dbxref=GeneID:7149425;gbkey=misc_RNA;product=RygD
NC_011748.1	RefSeq	exon	3543501	3543650	.	-	.	ID=id295;Parent=rna145;Dbxref=GeneID:7149425;gbkey=misc_RNA;product=RygD
NC_011748.1	RefSeq	gene	3543503	3543650	.	-	.	ID=gene3533;Name=rygC;Dbxref=GeneID:7147590;gbkey=Gene;gene=rygC;locus_tag=EC55989_misc_RNA_79
NC_011748.1	RefSeq	transcript	3543503	3543650	.	-	.	ID=rna146;Parent=gene3533;Dbxref=GeneID:7147590;gbkey=misc_RNA;product=RygC
NC_011748.1	RefSeq	exon	3543503	3543650	.	-	.	ID=id296;Parent=rna146;Dbxref=GeneID:7147590;gbkey=misc_RNA;product=RygC
NC_011748.1	RefSeq	gene	3543877	3544026	.	-	.	ID=gene3534;Name=EC55989_misc_RNA_80;Dbxref=GeneID:7147587;gbkey=Gene;locus_tag=EC55989_misc_RNA_80
NC_011748.1	RefSeq	transcript	3543877	3544026	.	-	.	ID=rna147;Parent=gene3534;Dbxref=GeneID:7147587;gbkey=misc_RNA;product=QUAD
NC_011748.1	RefSeq	exon	3543877	3544026	.	-	.	ID=id297;Parent=rna147;Dbxref=GeneID:7147587;gbkey=misc_RNA;product=QUAD
NC_011748.1	RefSeq	gene	3544071	3545504	.	-	.	ID=gene3535;Name=rfaE;Dbxref=GeneID:7145312;gbkey=Gene;gene=rfaE;locus_tag=EC55989_3466
NC_011748.1	RefSeq	CDS	3544071	3545504	.	-	0	ID=cds3276;Name=YP_002404423.1;Parent=gene3535;Note=catalyzes the phosphorylation of D-glycero-D-manno-heptose 7-phosphate to form D%2CD-heptose-1%2C7-bisphosphate and catalyzes transfer of ADP to D-glycero-D-manno-heptose 1-phosphate forming ADP-D%2CD-heptose;Dbxref=Genbank:YP_002404423.1,GeneID:7145312;gbkey=CDS;product=bifunctional heptose 7-phosphate kinase%2Fheptose 1-phosphate adenyltransferase;protein_id=YP_002404423.1;transl_table=11
NC_011748.1	RefSeq	gene	3545552	3548392	.	-	.	ID=gene3536;Name=glnE;Dbxref=GeneID:7147374;gbkey=Gene;gene=glnE;locus_tag=EC55989_3467
NC_011748.1	RefSeq	CDS	3545552	3548392	.	-	0	ID=cds3277;Name=YP_002404424.1;Parent=gene3536;Note=catalyzes the ATP-dependent addition of AMP to a subunit of glutamine synthetase%3B also catalyzes the reverse reaction - deadenylation%3B adenylation%2Fdeadenylation of glutamine synthetase subunits is important for the regulation of this enzyme;Dbxref=Genbank:YP_002404424.1,GeneID:7147374;gbkey=CDS;product=bifunctional glutamine-synthetase adenylyltransferase%2Fdeadenyltransferase;protein_id=YP_002404424.1;transl_table=11
NC_011748.1	RefSeq	gene	3548415	3549716	.	-	.	ID=gene3537;Name=ygiF;Dbxref=GeneID:7146305;gbkey=Gene;gene=ygiF;locus_tag=EC55989_3468
NC_011748.1	RefSeq	CDS	3548415	3549716	.	-	0	ID=cds3278;Name=YP_002404425.1;Parent=gene3537;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 8412694%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002404425.1,GeneID:7146305;gbkey=CDS;product=adenylate cyclase;protein_id=YP_002404425.1;transl_table=11
NC_011748.1	RefSeq	gene	3549733	3549939	.	-	.	ID=gene3538;Name=EC55989_3469;Dbxref=GeneID:7148894;gbkey=Gene;locus_tag=EC55989_3469
NC_011748.1	RefSeq	CDS	3549733	3549939	.	-	0	ID=cds3279;Name=YP_002404426.1;Parent=gene3538;Note=Evidence 6 : Doubtful CDS;Dbxref=Genbank:YP_002404426.1,GeneID:7148894;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404426.1;transl_table=11
NC_011748.1	RefSeq	gene	3549958	3550578	.	+	.	ID=gene3539;Name=htrG;Dbxref=GeneID:7144995;gbkey=Gene;gene=htrG;locus_tag=EC55989_3470
NC_011748.1	RefSeq	CDS	3549958	3550578	.	+	0	ID=cds3280;Name=YP_002404427.1;Parent=gene3539;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 11274153%3B Product type pr :  regulator;Dbxref=Genbank:YP_002404427.1,GeneID:7144995;gbkey=CDS;product=signal transduction protein;protein_id=YP_002404427.1;transl_table=11
NC_011748.1	RefSeq	gene	3550642	3551880	.	+	.	ID=gene3540;Name=cca;Dbxref=GeneID:7146478;gbkey=Gene;gene=cca;locus_tag=EC55989_3471
NC_011748.1	RefSeq	CDS	3550642	3551880	.	+	0	ID=cds3281;Name=YP_002404428.1;Parent=gene3540;Note=catalyzes the addition and repair of the essential 3%27-terminal CCA sequence in tRNAs without using a nucleic acid template%3B phosphohydrolase activities include hydrolysis of pyrophosphate%2C 5%27-nucleoside tri- and diphosphates%2C NADP%2C and 2%27-AMP with the production of Pi%2C metal-dependent phosphodiesterase activity for 2%27%2C3%27-cAMP%2C 2%27%2C3%27-cGMP%2C and 2%27%2C3%27-cCMP%2C and hydrolysis 2%27%2C3%27-cyclic substrates with the formation of 2%27-nucleotides and 3%27-nucleotides%3B these phosphohydrolase activities are probably involved in the repair of the tRNA 3%27-CCA terminus degraded by intracellular RNases;Dbxref=Genbank:YP_002404428.1,GeneID:7146478;gbkey=CDS;product=multifunctional tRNA nucleotidyl transferase%2F2%273%27-cyclic phosphodiesterase%2F2%27nucleotidase%2Fphosphatase;protein_id=YP_002404428.1;transl_table=11
NC_011748.1	RefSeq	gene	3552043	3552864	.	-	.	ID=gene3541;Name=bacA;Dbxref=GeneID:7145671;gbkey=Gene;gene=bacA;locus_tag=EC55989_3472
NC_011748.1	RefSeq	CDS	3552043	3552864	.	-	0	ID=cds3282;Name=YP_002404429.1;Parent=gene3541;Note=BacA%3B phosphatase activity in Escherichia coli not kinase%3B involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell;Dbxref=Genbank:YP_002404429.1,GeneID:7145671;gbkey=CDS;product=undecaprenyl pyrophosphate phosphatase;protein_id=YP_002404429.1;transl_table=11
NC_011748.1	RefSeq	gene	3552955	3553323	.	-	.	ID=gene3542;Name=folB;Dbxref=GeneID:7145592;gbkey=Gene;gene=folB;locus_tag=EC55989_3473
NC_011748.1	RefSeq	CDS	3552955	3553323	.	-	0	ID=cds3283;Name=YP_002404430.1;Parent=gene3542;Note=catalyzes the conversion of 7%2C8-dihydroneopterin to 6-hydroxymethyl-7%2C8-dihydropterin and can also catalyze the epimerization of carbon 2%27 of dihydroneopterin and dihydromonapterin;Dbxref=Genbank:YP_002404430.1,GeneID:7145592;gbkey=CDS;product=bifunctional dihydroneopterin aldolase%2Fdihydroneopterin triphosphate 2%27-epimerase;protein_id=YP_002404430.1;transl_table=11
NC_011748.1	RefSeq	gene	3553428	3554045	.	+	.	ID=gene3543;Name=plsY;Dbxref=GeneID:7146169;gbkey=Gene;gene=plsY;locus_tag=EC55989_3474
NC_011748.1	RefSeq	CDS	3553428	3554045	.	+	0	ID=cds3284;Name=YP_002404431.1;Parent=gene3543;Note=involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis%3B functions with PlsX;Dbxref=Genbank:YP_002404431.1,GeneID:7146169;gbkey=CDS;product=glycerol-3-phosphate acyltransferase PlsY;protein_id=YP_002404431.1;transl_table=11
NC_011748.1	RefSeq	gene	3554058	3554990	.	-	.	ID=gene3544;Name=ygiP;Dbxref=GeneID:7147198;gbkey=Gene;gene=ygiP;locus_tag=EC55989_3475
NC_011748.1	RefSeq	CDS	3554058	3554990	.	-	0	ID=cds3285;Name=YP_002404432.1;Parent=gene3544;Note=activates expression of genes required for L-tartrate-dependent anaerobic growth on glycerol;Dbxref=Genbank:YP_002404432.1,GeneID:7147198;gbkey=CDS;product=transcriptional activator TtdR;protein_id=YP_002404432.1;transl_table=11
NC_011748.1	RefSeq	gene	3555197	3556108	.	+	.	ID=gene3545;Name=ttdA;Dbxref=GeneID:7148897;gbkey=Gene;gene=ttdA;locus_tag=EC55989_3476
NC_011748.1	RefSeq	CDS	3555197	3556108	.	+	0	ID=cds3286;Name=YP_002404433.1;Parent=gene3545;Note=Involved in the tartrate degradation pathway;Dbxref=Genbank:YP_002404433.1,GeneID:7148897;gbkey=CDS;product=tartrate dehydratase subunit alpha;protein_id=YP_002404433.1;transl_table=11
NC_011748.1	RefSeq	gene	3556105	3556710	.	+	.	ID=gene3546;Name=ttdB;Dbxref=GeneID:7147869;gbkey=Gene;gene=ttdB;locus_tag=EC55989_3477
NC_011748.1	RefSeq	CDS	3556105	3556710	.	+	0	ID=cds3287;Name=YP_002404434.1;Parent=gene3546;Note=Involved in the tartrate degradation pathway;Dbxref=Genbank:YP_002404434.1,GeneID:7147869;gbkey=CDS;product=L%28%2B%29-tartrate dehydratase subunit beta;protein_id=YP_002404434.1;transl_table=11
NC_011748.1	RefSeq	gene	3556759	3558222	.	+	.	ID=gene3547;Name=ygjE;Dbxref=GeneID:7147870;gbkey=Gene;gene=ygjE;locus_tag=EC55989_3478
NC_011748.1	RefSeq	CDS	3556759	3558222	.	+	0	ID=cds3288;Name=YP_002404435.1;Parent=gene3547;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002404435.1,GeneID:7147870;gbkey=CDS;product=tartrate:succinate antiporter;protein_id=YP_002404435.1;transl_table=11
NC_011748.1	RefSeq	gene	3558265	3559278	.	-	.	ID=gene3548;Name=gcp;Dbxref=GeneID:7148902;gbkey=Gene;gene=gcp;locus_tag=EC55989_3479
NC_011748.1	RefSeq	CDS	3558265	3559278	.	-	0	ID=cds3289;Name=YP_002404436.1;Parent=gene3548;Note=in most organisms%2C only the N-terminal domain is present in a single polypeptide%3B in some archaea this domain is fused to a kinase domain%3B this gene is essential for growth in Escherichia coli and Bacillus subtilis%3B the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins%3B the Pyrococcus structure shows DNA-binding properties%2C iron-binding%2C ATP-binding%2C and AP endonuclease activity;Dbxref=Genbank:YP_002404436.1,GeneID:7148902;gbkey=CDS;product=DNA-binding%2Firon metalloprotein%2FAP endonuclease;protein_id=YP_002404436.1;transl_table=11
NC_011748.1	RefSeq	gene	3559515	3559730	.	+	.	ID=gene3549;Name=rpsU;Dbxref=GeneID:7146273;gbkey=Gene;gene=rpsU;locus_tag=EC55989_3480
NC_011748.1	RefSeq	CDS	3559515	3559730	.	+	0	ID=cds3290;Name=YP_002404437.1;Parent=gene3549;Note=a small basic protein that is one of the last in the subunit assembly%3B omission does not prevent assembly but the subunit is inactive%3B binds central domain of 16S rRNA;Dbxref=Genbank:YP_002404437.1,GeneID:7146273;gbkey=CDS;product=30S ribosomal protein S21;protein_id=YP_002404437.1;transl_table=11
NC_011748.1	RefSeq	gene	3559841	3561586	.	+	.	ID=gene3550;Name=dnaG;Dbxref=GeneID:7147525;gbkey=Gene;gene=dnaG;locus_tag=EC55989_3481
NC_011748.1	RefSeq	CDS	3559841	3561586	.	+	0	ID=cds3291;Name=YP_002404438.1;Parent=gene3550;Note=synthesizes RNA primers at the replication forks;Dbxref=Genbank:YP_002404438.1,GeneID:7147525;gbkey=CDS;product=DNA primase;protein_id=YP_002404438.1;transl_table=11
NC_011748.1	RefSeq	gene	3561781	3563622	.	+	.	ID=gene3551;Name=rpoD;Dbxref=GeneID:7145936;gbkey=Gene;gene=rpoD;locus_tag=EC55989_3482
NC_011748.1	RefSeq	CDS	3561781	3563622	.	+	0	ID=cds3292;Name=YP_002404439.1;Parent=gene3551;Note=sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released%3B this is the primary sigma factor of bacteria;Dbxref=Genbank:YP_002404439.1,GeneID:7145936;gbkey=CDS;product=RNA polymerase sigma factor RpoD;protein_id=YP_002404439.1;transl_table=11
NC_011748.1	RefSeq	gene	3563700	3564206	.	-	.	ID=gene3552;Name=ygjF;Dbxref=GeneID:7147498;gbkey=Gene;gene=ygjF;locus_tag=EC55989_3483
NC_011748.1	RefSeq	CDS	3563700	3564206	.	-	0	ID=cds3293;Name=YP_002404440.1;Parent=gene3552;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 20412902%2C 99453007%2C 6269063%2C 7567469%2C 8878487%2C 9489705%3B Product type e : enzyme;Dbxref=Genbank:YP_002404440.1,GeneID:7147498;gbkey=CDS;product=G%2FU mismatch-specific DNA glycosylase;protein_id=YP_002404440.1;transl_table=11
NC_011748.1	RefSeq	gene	3564331	3564406	.	+	.	ID=gene3553;Name=EC55989_tRNA35;Dbxref=GeneID:7148903;gbkey=Gene;locus_tag=EC55989_tRNA35
NC_011748.1	RefSeq	tRNA	3564331	3564406	.	+	.	ID=rna148;Dbxref=GeneID:7148903;gbkey=tRNA;product=tRNA-Met
NC_011748.1	RefSeq	exon	3564331	3564406	.	+	.	ID=id298;Parent=rna148;Dbxref=GeneID:7148903;gbkey=tRNA;product=tRNA-Met
NC_011748.1	RefSeq	gene	3564460	3565224	.	-	.	ID=gene3554;Name=yqjH;Dbxref=GeneID:7145345;gbkey=Gene;gene=yqjH;locus_tag=EC55989_3484
NC_011748.1	RefSeq	CDS	3564460	3565224	.	-	0	ID=cds3294;Name=YP_002404441.1;Parent=gene3554;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pc :  carrier;Dbxref=Genbank:YP_002404441.1,GeneID:7145345;gbkey=CDS;product=siderophore interacting protein;protein_id=YP_002404441.1;transl_table=11
NC_011748.1	RefSeq	gene	3565501	3566124	.	+	.	ID=gene3555;Name=yqjI;Dbxref=GeneID:7149433;gbkey=Gene;gene=yqjI;locus_tag=EC55989_3485
NC_011748.1	RefSeq	CDS	3565501	3566124	.	+	0	ID=cds3295;Name=YP_002404442.1;Parent=gene3555;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pr :  regulator;Dbxref=Genbank:YP_002404442.1,GeneID:7149433;gbkey=CDS;product=transcriptional regulator;protein_id=YP_002404442.1;transl_table=11
NC_011748.1	RefSeq	gene	3566278	3567798	.	-	.	ID=gene3556;Name=aer;Dbxref=GeneID:7149434;gbkey=Gene;gene=aer;locus_tag=EC55989_3486
NC_011748.1	RefSeq	CDS	3566278	3567798	.	-	0	ID=cds3296;Name=YP_002404443.1;Parent=gene3556;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 20015410%2C 9380671%2C 9643537%2C 9190831%3B Product type r : regulator;Dbxref=Genbank:YP_002404443.1,GeneID:7149434;gbkey=CDS;product=fused signal transducer for aerotaxis sensory component %3B methyl accepting chemotaxis component;protein_id=YP_002404443.1;transl_table=11
NC_011748.1	RefSeq	gene	3568189	3569595	.	+	.	ID=gene3557;Name=ygjG;Dbxref=GeneID:7145463;gbkey=Gene;gene=ygjG;locus_tag=EC55989_3487
NC_011748.1	RefSeq	CDS	3568189	3569595	.	+	0	ID=cds3297;Name=YP_002404444.1;Parent=gene3557;Note=catalyzes the formation of 4-aminobutyraldehyde from putrescine and 2-oxoglutarate;Dbxref=Genbank:YP_002404444.1,GeneID:7145463;gbkey=CDS;product=putrescine--2-oxoglutarate aminotransferase;protein_id=YP_002404444.1;transl_table=11
NC_011748.1	RefSeq	gene	3569637	3569969	.	-	.	ID=gene3558;Name=ygjH;Dbxref=GeneID:7148904;gbkey=Gene;gene=ygjH;locus_tag=EC55989_3488
NC_011748.1	RefSeq	CDS	3569637	3569969	.	-	0	ID=cds3298;Name=YP_002404445.1;Parent=gene3558;Note=Evidence 2b : Function of strongly homologous gene%3B PubMedId : 11101501;Dbxref=Genbank:YP_002404445.1,GeneID:7148904;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404445.1;transl_table=11
NC_011748.1	RefSeq	gene	3570188	3571171	.	+	.	ID=gene3559;Name=ebgR;Dbxref=GeneID:7148905;gbkey=Gene;gene=ebgR;locus_tag=EC55989_3489
NC_011748.1	RefSeq	CDS	3570188	3571171	.	+	0	ID=cds3299;Name=YP_002404446.1;Parent=gene3559;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 89128452%2C 2515108%2C 3939708%3B Product type r : regulator;Dbxref=Genbank:YP_002404446.1,GeneID:7148905;gbkey=CDS;product=DNA-binding transcriptional repressor EbgR;protein_id=YP_002404446.1;transl_table=11
NC_011748.1	RefSeq	gene	3571355	3574447	.	+	.	ID=gene3560;Name=ebgA;Dbxref=GeneID:7145969;gbkey=Gene;gene=ebgA;locus_tag=EC55989_3490
NC_011748.1	RefSeq	CDS	3571355	3574447	.	+	0	ID=cds3300;Name=YP_002404447.1;Parent=gene3560;Note=in Escherichia coli this is the second beta-galactosidase system;Dbxref=Genbank:YP_002404447.1,GeneID:7145969;gbkey=CDS;product=cryptic beta-D-galactosidase subunit alpha;protein_id=YP_002404447.1;transl_table=11
NC_011748.1	RefSeq	gene	3574444	3574893	.	+	.	ID=gene3561;Name=ebgC;Dbxref=GeneID:7145967;gbkey=Gene;gene=ebgC;locus_tag=EC55989_3491
NC_011748.1	RefSeq	CDS	3574444	3574893	.	+	0	ID=cds3301;Name=YP_002404448.1;Parent=gene3561;Note=in Escherichia coli this is the second beta-galactosidase system;Dbxref=Genbank:YP_002404448.1,GeneID:7145967;gbkey=CDS;product=cryptic beta-D-galactosidase subunit beta;protein_id=YP_002404448.1;transl_table=11
NC_011748.1	RefSeq	gene	3574956	3576389	.	+	.	ID=gene3562;Name=ygjI;Dbxref=GeneID:7145968;gbkey=Gene;gene=ygjI;locus_tag=EC55989_3492
NC_011748.1	RefSeq	CDS	3574956	3576389	.	+	0	ID=cds3302;Name=YP_002404449.1;Parent=gene3562;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002404449.1,GeneID:7145968;gbkey=CDS;product=transporter;protein_id=YP_002404449.1;transl_table=11
NC_011748.1	RefSeq	gene	3576523	3577593	.	+	.	ID=gene3563;Name=ygjJ;Dbxref=GeneID:7148906;gbkey=Gene;gene=ygjJ;locus_tag=EC55989_3493
NC_011748.1	RefSeq	CDS	3576523	3577593	.	+	0	ID=cds3303;Name=YP_002404450.1;Parent=gene3563;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404450.1,GeneID:7148906;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404450.1;transl_table=11
NC_011748.1	RefSeq	gene	3577610	3579961	.	+	.	ID=gene3564;Name=ygjK;Dbxref=GeneID:7148907;gbkey=Gene;gene=ygjK;locus_tag=EC55989_3494
NC_011748.1	RefSeq	CDS	3577610	3579961	.	+	0	ID=cds3304;Name=YP_002404451.1;Parent=gene3564;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 15213393%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002404451.1,GeneID:7148907;gbkey=CDS;product=glycosyl hydrolase;protein_id=YP_002404451.1;transl_table=11
NC_011748.1	RefSeq	gene	3580287	3582305	.	+	.	ID=gene3565;Name=fadH;Dbxref=GeneID:7148908;gbkey=Gene;gene=fadH;locus_tag=EC55989_3495
NC_011748.1	RefSeq	CDS	3580287	3582305	.	+	0	ID=cds3305;Name=YP_002404452.1;Parent=gene3565;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 12840019%2C 89380266%3B Product type e : enzyme;Dbxref=Genbank:YP_002404452.1,GeneID:7148908;gbkey=CDS;product=2%2C4-dienoyl-CoA reductase;protein_id=YP_002404452.1;transl_table=11
NC_011748.1	RefSeq	gene	3582350	3582766	.	-	.	ID=gene3566;Name=ygjM;Dbxref=GeneID:7146059;gbkey=Gene;gene=ygjM;locus_tag=EC55989_3496
NC_011748.1	RefSeq	CDS	3582350	3582766	.	-	0	ID=cds3306;Name=YP_002404453.1;Parent=gene3566;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pr :  regulator;Dbxref=Genbank:YP_002404453.1,GeneID:7146059;gbkey=CDS;product=DNA-binding transcriptional regulator;protein_id=YP_002404453.1;transl_table=11
NC_011748.1	RefSeq	gene	3582763	3582933	.	-	.	ID=gene3567;Name=EC55989_3497;Dbxref=GeneID:7148909;gbkey=Gene;locus_tag=EC55989_3497
NC_011748.1	RefSeq	CDS	3582763	3582933	.	-	0	ID=cds3307;Name=YP_002404454.1;Parent=gene3567;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404454.1,GeneID:7148909;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404454.1;transl_table=11
NC_011748.1	RefSeq	gene	3583037	3584173	.	-	.	ID=gene3568;Name=ygjO;Dbxref=GeneID:7144996;gbkey=Gene;gene=ygjO;locus_tag=EC55989_3498
NC_011748.1	RefSeq	CDS	3583037	3584173	.	-	0	ID=cds3308;Name=YP_002404455.1;Parent=gene3568;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002404455.1,GeneID:7144996;gbkey=CDS;product=methyltransferase small domain;protein_id=YP_002404455.1;transl_table=11
NC_011748.1	RefSeq	gene	3584258	3584761	.	+	.	ID=gene3569;Name=ygjP;Dbxref=GeneID:7148910;gbkey=Gene;gene=ygjP;locus_tag=EC55989_3499
NC_011748.1	RefSeq	CDS	3584258	3584761	.	+	0	ID=cds3309;Name=YP_002404456.1;Parent=gene3569;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002404456.1,GeneID:7148910;gbkey=CDS;product=metal dependent hydrolase;protein_id=YP_002404456.1;transl_table=11
NC_011748.1	RefSeq	gene	3584838	3585521	.	+	.	ID=gene3570;Name=ygjQ;Dbxref=GeneID:7148911;gbkey=Gene;gene=ygjQ;locus_tag=EC55989_3500
NC_011748.1	RefSeq	CDS	3584838	3585521	.	+	0	ID=cds3310;Name=YP_002404457.1;Parent=gene3570;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pc :  carrier;Dbxref=Genbank:YP_002404457.1,GeneID:7148911;gbkey=CDS;product=thioredoxin-like protein;protein_id=YP_002404457.1;transl_table=11
NC_011748.1	RefSeq	gene	3585582	3586586	.	+	.	ID=gene3571;Name=ygjR;Dbxref=GeneID:7148912;gbkey=Gene;gene=ygjR;locus_tag=EC55989_3501
NC_011748.1	RefSeq	CDS	3585582	3586586	.	+	0	ID=cds3311;Name=YP_002404458.1;Parent=gene3571;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002404458.1,GeneID:7148912;gbkey=CDS;product=NAD%28P%29-binding dehydrogenase;protein_id=YP_002404458.1;transl_table=11
NC_011748.1	RefSeq	gene	3586663	3586850	.	+	.	ID=gene3572;Name=sraF;Dbxref=GeneID:7148913;gbkey=Gene;gene=sraF;locus_tag=EC55989_misc_RNA_81
NC_011748.1	RefSeq	transcript	3586663	3586850	.	+	.	ID=rna149;Parent=gene3572;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 11448770%3B Product type n : RNA;Dbxref=GeneID:7148913;gbkey=misc_RNA;product=SraF
NC_011748.1	RefSeq	exon	3586663	3586850	.	+	.	ID=id299;Parent=rna149;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 11448770%3B Product type n : RNA;Dbxref=GeneID:7148913;gbkey=misc_RNA;product=SraF
NC_011748.1	RefSeq	gene	3586869	3587834	.	+	.	ID=gene3573;Name=alx;Dbxref=GeneID:7147700;gbkey=Gene;gene=alx;locus_tag=EC55989_3502
NC_011748.1	RefSeq	CDS	3586869	3587834	.	+	0	ID=cds3312;Name=YP_002404459.1;Parent=gene3573;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 12107143%2C 2108134%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002404459.1,GeneID:7147700;gbkey=CDS;product=inner membrane protein%2C part of terminus;protein_id=YP_002404459.1;transl_table=11
NC_011748.1	RefSeq	STS	3587953	3588336	.	+	.	ID=id300;Dbxref=UniSTS:523642;gbkey=STS
NC_011748.1	RefSeq	gene	3588233	3589477	.	+	.	ID=gene3574;Name=sstT;Dbxref=GeneID:7145489;gbkey=Gene;gene=sstT;locus_tag=EC55989_3503
NC_011748.1	RefSeq	CDS	3588233	3589477	.	+	0	ID=cds3313;Name=YP_002404460.1;Parent=gene3574;Note=involved in the import of serine and threonine coupled with the import of sodium;Dbxref=Genbank:YP_002404460.1,GeneID:7145489;gbkey=CDS;product=serine%2Fthreonine transporter SstT;protein_id=YP_002404460.1;transl_table=11
NC_011748.1	RefSeq	gene	3589482	3590033	.	-	.	ID=gene3575;Name=ygjV;Dbxref=GeneID:7147718;gbkey=Gene;gene=ygjV;locus_tag=EC55989_3504
NC_011748.1	RefSeq	CDS	3589482	3590033	.	-	0	ID=cds3314;Name=YP_002404461.1;Parent=gene3575;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002404461.1,GeneID:7147718;gbkey=CDS;product=inner membrane protein;protein_id=YP_002404461.1;transl_table=11
NC_011748.1	RefSeq	gene	3590116	3591603	.	-	.	ID=gene3576;Name=uxaA;Dbxref=GeneID:7148914;gbkey=Gene;gene=uxaA;locus_tag=EC55989_3505
NC_011748.1	RefSeq	CDS	3590116	3591603	.	-	0	ID=cds3315;Name=YP_002404462.1;Parent=gene3576;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 4570160%2C 83114543%2C 3038546%3B Product type e : enzyme;Dbxref=Genbank:YP_002404462.1,GeneID:7148914;gbkey=CDS;product=altronate hydrolase;protein_id=YP_002404462.1;transl_table=11
NC_011748.1	RefSeq	gene	3591618	3593030	.	-	.	ID=gene3577;Name=uxaC;Dbxref=GeneID:7147938;gbkey=Gene;gene=uxaC;locus_tag=EC55989_3506
NC_011748.1	RefSeq	CDS	3591618	3593030	.	-	0	ID=cds3316;Name=YP_002404463.1;Parent=gene3577;Note=catalyzes the interconversion of D-glucuronate to D-fructuronate or D-galacturonate to D-tagaturonate%3B functions in glucuronic and galacturonic metabolism;Dbxref=Genbank:YP_002404463.1,GeneID:7147938;gbkey=CDS;product=glucuronate isomerase;protein_id=YP_002404463.1;transl_table=11
NC_011748.1	RefSeq	gene	3593393	3594811	.	+	.	ID=gene3578;Name=exuT;Dbxref=GeneID:7147940;gbkey=Gene;gene=exuT;locus_tag=EC55989_3507
NC_011748.1	RefSeq	CDS	3593393	3594811	.	+	0	ID=cds3317;Name=YP_002404464.1;Parent=gene3578;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 83218546%2C 98190790%3B Product type t : transporter;Dbxref=Genbank:YP_002404464.1,GeneID:7147940;gbkey=CDS;product=hexuronate transporter;protein_id=YP_002404464.1;transl_table=11
NC_011748.1	RefSeq	gene	3594899	3595987	.	-	.	ID=gene3579;Name=EC55989_3508;Dbxref=GeneID:7146045;gbkey=Gene;locus_tag=EC55989_3508
NC_011748.1	RefSeq	CDS	3594899	3595987	.	-	0	ID=cds3318;Name=YP_002404465.1;Parent=gene3579;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404465.1,GeneID:7146045;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404465.1;transl_table=11
NC_011748.1	RefSeq	gene	3595984	3598686	.	-	.	ID=gene3580;Name=EC55989_3509;Dbxref=GeneID:7144997;gbkey=Gene;locus_tag=EC55989_3509
NC_011748.1	RefSeq	CDS	3595984	3598686	.	-	0	ID=cds3319;Name=YP_002404466.1;Parent=gene3580;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404466.1,GeneID:7144997;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404466.1;transl_table=11
NC_011748.1	RefSeq	gene	3598760	3599260	.	-	.	ID=gene3581;Name=EC55989_3510;Dbxref=GeneID:7144998;gbkey=Gene;locus_tag=EC55989_3510
NC_011748.1	RefSeq	CDS	3598760	3599260	.	-	0	ID=cds3320;Name=YP_002404467.1;Parent=gene3581;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type ps :  structure;Dbxref=Genbank:YP_002404467.1,GeneID:7144998;gbkey=CDS;product=adhesin major subunit pilin;protein_id=YP_002404467.1;transl_table=11
NC_011748.1	RefSeq	gene	3599290	3600006	.	-	.	ID=gene3582;Name=EC55989_3511;Dbxref=GeneID:7144999;gbkey=Gene;locus_tag=EC55989_3511
NC_011748.1	RefSeq	CDS	3599290	3600006	.	-	0	ID=cds3321;Name=YP_002404468.1;Parent=gene3582;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type ps :  structure;Dbxref=Genbank:YP_002404468.1,GeneID:7144999;gbkey=CDS;product=fimbrial protein;protein_id=YP_002404468.1;transl_table=11
NC_011748.1	RefSeq	gene	3600302	3601078	.	+	.	ID=gene3583;Name=exuR;Dbxref=GeneID:7145000;gbkey=Gene;gene=exuR;locus_tag=EC55989_3512
NC_011748.1	RefSeq	CDS	3600302	3601078	.	+	0	ID=cds3322;Name=YP_002404469.1;Parent=gene3583;Note=regulates the exuT%2C uxaCA and uxuRAB operons which encode genes involved in hexuronate utilization.;Dbxref=Genbank:YP_002404469.1,GeneID:7145000;gbkey=CDS;product=DNA-binding transcriptional repressor ExuR;protein_id=YP_002404469.1;transl_table=11
NC_011748.1	RefSeq	gene	3601423	3602085	.	+	.	ID=gene3584;Name=yqjA;Dbxref=GeneID:7146044;gbkey=Gene;gene=yqjA;locus_tag=EC55989_3513
NC_011748.1	RefSeq	CDS	3601423	3602085	.	+	0	ID=cds3323;Name=YP_002404470.1;Parent=gene3584;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002404470.1,GeneID:7146044;gbkey=CDS;product=inner membrane protein;protein_id=YP_002404470.1;transl_table=11
NC_011748.1	RefSeq	gene	3602089	3602472	.	+	.	ID=gene3585;Name=yqjB;Dbxref=GeneID:7149426;gbkey=Gene;gene=yqjB;locus_tag=EC55989_3514
NC_011748.1	RefSeq	CDS	3602089	3602472	.	+	0	ID=cds3324;Name=YP_002404471.1;Parent=gene3585;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 11274153;Dbxref=Genbank:YP_002404471.1,GeneID:7149426;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404471.1;transl_table=11
NC_011748.1	RefSeq	gene	3602619	3602987	.	+	.	ID=gene3586;Name=yqjC;Dbxref=GeneID:7149427;gbkey=Gene;gene=yqjC;locus_tag=EC55989_3515
NC_011748.1	RefSeq	CDS	3602619	3602987	.	+	0	ID=cds3325;Name=YP_002404472.1;Parent=gene3586;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404472.1,GeneID:7149427;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404472.1;transl_table=11
NC_011748.1	RefSeq	gene	3603025	3603330	.	+	.	ID=gene3587;Name=yqjD;Dbxref=GeneID:7149428;gbkey=Gene;gene=yqjD;locus_tag=EC55989_3516
NC_011748.1	RefSeq	CDS	3603025	3603330	.	+	0	ID=cds3326;Name=YP_002404473.1;Parent=gene3587;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404473.1,GeneID:7149428;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404473.1;transl_table=11
NC_011748.1	RefSeq	gene	3603333	3603737	.	+	.	ID=gene3588;Name=yqjE;Dbxref=GeneID:7149429;gbkey=Gene;gene=yqjE;locus_tag=EC55989_3517
NC_011748.1	RefSeq	CDS	3603333	3603737	.	+	0	ID=cds3327;Name=YP_002404474.1;Parent=gene3588;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002404474.1,GeneID:7149429;gbkey=CDS;product=inner membrane protein;protein_id=YP_002404474.1;transl_table=11
NC_011748.1	RefSeq	gene	3603727	3604026	.	+	.	ID=gene3589;Name=yqjK;Dbxref=GeneID:7149430;gbkey=Gene;gene=yqjK;locus_tag=EC55989_3518
NC_011748.1	RefSeq	CDS	3603727	3604026	.	+	0	ID=cds3328;Name=YP_002404475.1;Parent=gene3589;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404475.1,GeneID:7149430;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404475.1;transl_table=11
NC_011748.1	RefSeq	gene	3604212	3604604	.	+	.	ID=gene3590;Name=yqjF;Dbxref=GeneID:7149435;gbkey=Gene;gene=yqjF;locus_tag=EC55989_3519
NC_011748.1	RefSeq	CDS	3604212	3604604	.	+	0	ID=cds3329;Name=YP_002404476.1;Parent=gene3590;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002404476.1,GeneID:7149435;gbkey=CDS;product=quinol oxidase subunit;protein_id=YP_002404476.1;transl_table=11
NC_011748.1	RefSeq	gene	3604674	3605660	.	+	.	ID=gene3591;Name=yqjG;Dbxref=GeneID:7149431;gbkey=Gene;gene=yqjG;locus_tag=EC55989_3520
NC_011748.1	RefSeq	CDS	3604674	3605660	.	+	0	ID=cds3330;Name=YP_002404477.1;Parent=gene3591;Note=Evidence 2b : Function of strongly homologous gene%3B PubMedId : 8478329%3B Product type e : enzyme;Dbxref=Genbank:YP_002404477.1,GeneID:7149431;gbkey=CDS;product=S-transferase;protein_id=YP_002404477.1;transl_table=11
NC_011748.1	RefSeq	gene	3605953	3606318	.	+	.	ID=gene3592;Name=yhaH;Dbxref=GeneID:7149432;gbkey=Gene;gene=yhaH;locus_tag=EC55989_3521
NC_011748.1	RefSeq	CDS	3605953	3606318	.	+	0	ID=cds3331;Name=YP_002404478.1;Parent=gene3592;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002404478.1,GeneID:7149432;gbkey=CDS;product=inner membrane protein;protein_id=YP_002404478.1;transl_table=11
NC_011748.1	RefSeq	gene	3606560	3606916	.	+	.	ID=gene3593;Name=yhaI;Dbxref=GeneID:7148917;gbkey=Gene;gene=yhaI;locus_tag=EC55989_3522
NC_011748.1	RefSeq	CDS	3606560	3606916	.	+	0	ID=cds3332;Name=YP_002404479.1;Parent=gene3593;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002404479.1,GeneID:7148917;gbkey=CDS;product=inner membrane protein;protein_id=YP_002404479.1;transl_table=11
NC_011748.1	RefSeq	gene	3606967	3607863	.	-	.	ID=gene3594;Name=yhaJ;Dbxref=GeneID:7148918;gbkey=Gene;gene=yhaJ;locus_tag=EC55989_3523
NC_011748.1	RefSeq	CDS	3606967	3607863	.	-	0	ID=cds3333;Name=YP_002404480.1;Parent=gene3594;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pr :  regulator;Dbxref=Genbank:YP_002404480.1,GeneID:7148918;gbkey=CDS;product=DNA-binding transcriptional regulator;protein_id=YP_002404480.1;transl_table=11
NC_011748.1	RefSeq	gene	3607968	3608669	.	+	.	ID=gene3595;Name=yhaK;Dbxref=GeneID:7148919;gbkey=Gene;gene=yhaK;locus_tag=EC55989_3524
NC_011748.1	RefSeq	CDS	3607968	3608669	.	+	0	ID=cds3334;Name=YP_002404481.1;Parent=gene3595;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pr :  regulator;Dbxref=Genbank:YP_002404481.1,GeneID:7148919;gbkey=CDS;product=pirin-related protein;protein_id=YP_002404481.1;transl_table=11
NC_011748.1	RefSeq	gene	3608692	3608856	.	+	.	ID=gene3596;Name=yhaL;Dbxref=GeneID:7148920;gbkey=Gene;gene=yhaL;locus_tag=EC55989_3525
NC_011748.1	RefSeq	CDS	3608692	3608856	.	+	0	ID=cds3335;Name=YP_002404482.1;Parent=gene3596;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404482.1,GeneID:7148920;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404482.1;transl_table=11
NC_011748.1	RefSeq	gene	3608917	3610227	.	-	.	ID=gene3597;Name=yhaM;Dbxref=GeneID:7148921;gbkey=Gene;gene=yhaM;locus_tag=EC55989_3526
NC_011748.1	RefSeq	CDS	3608917	3610227	.	-	0	ID=cds3336;Name=YP_002404483.1;Parent=gene3597;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404483.1,GeneID:7148921;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404483.1;transl_table=11
NC_011748.1	RefSeq	gene	3610255	3611523	.	-	.	ID=gene3598;Name=yhaO;Dbxref=GeneID:7148922;gbkey=Gene;gene=yhaO;locus_tag=EC55989_3528
NC_011748.1	RefSeq	CDS	3610255	3611523	.	-	0	ID=cds3337;Name=YP_002404484.1;Parent=gene3598;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002404484.1,GeneID:7148922;gbkey=CDS;product=transporter;protein_id=YP_002404484.1;transl_table=11
NC_011748.1	RefSeq	gene	3611861	3613225	.	-	.	ID=gene3599;Name=tdcG;Dbxref=GeneID:7148923;gbkey=Gene;gene=tdcG;locus_tag=EC55989_3529
NC_011748.1	RefSeq	CDS	3611861	3613225	.	-	0	ID=cds3338;Name=YP_002404485.1;Parent=gene3599;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 98143432%2C 9484901%3B Product type e : enzyme;Dbxref=Genbank:YP_002404485.1,GeneID:7148923;gbkey=CDS;product=L-serine dehydratase 3;protein_id=YP_002404485.1;transl_table=11
NC_011748.1	RefSeq	STS	3612084	3612252	.	+	.	ID=id301;Dbxref=UniSTS:26792;gbkey=STS
NC_011748.1	RefSeq	gene	3613297	3613686	.	-	.	ID=gene3600;Name=tdcF;Dbxref=GeneID:7147769;gbkey=Gene;gene=tdcF;locus_tag=EC55989_3530
NC_011748.1	RefSeq	CDS	3613297	3613686	.	-	0	ID=cds3339;Name=YP_002404486.1;Parent=gene3600;Note=Evidence 2b : Function of strongly homologous gene%3B PubMedId : 12777779%2C 9484901%3B Product type e : enzyme;Dbxref=Genbank:YP_002404486.1,GeneID:7147769;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404486.1;transl_table=11
NC_011748.1	RefSeq	gene	3613700	3615994	.	-	.	ID=gene3601;Name=tdcE;Dbxref=GeneID:7147768;gbkey=Gene;gene=tdcE;locus_tag=EC55989_3531
NC_011748.1	RefSeq	CDS	3613700	3615994	.	-	0	ID=cds3340;Name=YP_002404487.1;Parent=gene3601;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 98143432%2C 9484901%3B Product type e : enzyme;Dbxref=Genbank:YP_002404487.1,GeneID:7147768;gbkey=CDS;product=pyruvate formate-lyase 4%2F2-ketobutyrate formate-lyase;protein_id=YP_002404487.1;transl_table=11
NC_011748.1	RefSeq	gene	3616028	3617248	.	-	.	ID=gene3602;Name=tdcD;Dbxref=GeneID:7147767;gbkey=Gene;gene=tdcD;locus_tag=EC55989_3532
NC_011748.1	RefSeq	CDS	3616028	3617248	.	-	0	ID=cds3341;Name=YP_002404488.1;Parent=gene3602;Note=catalyzes the formation of propanoyl phosphate from propanoate and ATP%3B TdcD also has acetate kinase activities and functions in anaerobic threonine catabolism;Dbxref=Genbank:YP_002404488.1,GeneID:7147767;gbkey=CDS;product=propionate%2Facetate kinase;protein_id=YP_002404488.1;transl_table=11
NC_011748.1	RefSeq	gene	3617262	3618593	.	-	.	ID=gene3603;Name=tdcC;Dbxref=GeneID:7147766;gbkey=Gene;gene=tdcC;locus_tag=EC55989_3533
NC_011748.1	RefSeq	CDS	3617262	3618593	.	-	0	ID=cds3342;Name=YP_002404489.1;Parent=gene3603;Note=involved in the import of threonine and serine in combination with the import of a proton;Dbxref=Genbank:YP_002404489.1,GeneID:7147766;gbkey=CDS;product=threonine%2Fserine transporter TdcC;protein_id=YP_002404489.1;transl_table=11
NC_011748.1	RefSeq	gene	3618615	3619604	.	-	.	ID=gene3604;Name=tdcB;Dbxref=GeneID:7147765;gbkey=Gene;gene=tdcB;locus_tag=EC55989_3534
NC_011748.1	RefSeq	CDS	3618615	3619604	.	-	0	ID=cds3343;Name=YP_002404490.1;Parent=gene3604;Note=catalyzes the formation of 2-oxobutanoate from L-threonine%3B catabolic;Dbxref=Genbank:YP_002404490.1,GeneID:7147765;gbkey=CDS;product=threonine dehydratase;protein_id=YP_002404490.1;transl_table=11
NC_011748.1	RefSeq	gene	3619703	3620641	.	-	.	ID=gene3605;Name=tdcA;Dbxref=GeneID:7147764;gbkey=Gene;gene=tdcA;locus_tag=EC55989_3535
NC_011748.1	RefSeq	CDS	3619703	3620641	.	-	0	ID=cds3344;Name=YP_002404491.1;Parent=gene3605;Note=regulates the tdcABCDEFG operon which is involved in amino acid degradation;Dbxref=Genbank:YP_002404491.1,GeneID:7147764;gbkey=CDS;product=DNA-binding transcriptional activator TdcA;protein_id=YP_002404491.1;transl_table=11
NC_011748.1	RefSeq	gene	3620818	3621174	.	+	.	ID=gene3606;Name=tdcR;Dbxref=GeneID:7147763;gbkey=Gene;gene=tdcR;locus_tag=EC55989_3536
NC_011748.1	RefSeq	CDS	3620818	3621174	.	+	0	ID=cds3345;Name=YP_002404492.1;Parent=gene3606;Note=participates in controlling the expression of several structural genes for the enzyme threonine dehydratase%3B TdcR activates the tdcABCDEFG operon;Dbxref=Genbank:YP_002404492.1,GeneID:7147763;gbkey=CDS;product=DNA-binding transcriptional activator TdcR;protein_id=YP_002404492.1;transl_table=11
NC_011748.1	RefSeq	gene	3621430	3621969	.	+	.	ID=gene3607;Name=yhaB;Dbxref=GeneID:7147770;gbkey=Gene;gene=yhaB;locus_tag=EC55989_3537
NC_011748.1	RefSeq	CDS	3621430	3621969	.	+	0	ID=cds3346;Name=YP_002404493.1;Parent=gene3607;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404493.1,GeneID:7147770;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404493.1;transl_table=11
NC_011748.1	RefSeq	gene	3621991	3623178	.	+	.	ID=gene3608;Name=yhaC;Dbxref=GeneID:7148915;gbkey=Gene;gene=yhaC;locus_tag=EC55989_3538
NC_011748.1	RefSeq	CDS	3621991	3623178	.	+	0	ID=cds3347;Name=YP_002404494.1;Parent=gene3608;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 1705543%2C 2573820%2C 2660107%2C 6351058;Dbxref=Genbank:YP_002404494.1,GeneID:7148915;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404494.1;transl_table=11
NC_011748.1	RefSeq	gene	3623516	3624496	.	+	.	ID=gene3609;Name=EC55989_3540;Dbxref=GeneID:7148916;gbkey=Gene;locus_tag=EC55989_3540
NC_011748.1	RefSeq	CDS	3623516	3624496	.	+	0	ID=cds3348;Name=YP_002404495.1;Parent=gene3609;Note=Evidence 2b : Function of strongly homologous gene%3B Product type e : enzyme;Dbxref=Genbank:YP_002404495.1,GeneID:7148916;gbkey=CDS;product=transposase%2C IS110 family;protein_id=YP_002404495.1;transl_table=11
NC_011748.1	RefSeq	gene	3625184	3625560	.	-	.	ID=gene3610;Name=rnpB;Dbxref=GeneID:7145001;gbkey=Gene;gene=rnpB;locus_tag=EC55989_misc_RNA_82
NC_011748.1	RefSeq	transcript	3625184	3625560	.	-	.	ID=rna150;Parent=gene3610;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B Product type n : RNA;Dbxref=GeneID:7145001;gbkey=misc_RNA;product=M1 RNA
NC_011748.1	RefSeq	exon	3625184	3625560	.	-	.	ID=id302;Parent=rna150;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B Product type n : RNA;Dbxref=GeneID:7145001;gbkey=misc_RNA;product=M1 RNA
NC_011748.1	RefSeq	gene	3625593	3626819	.	-	.	ID=gene3611;Name=garK;Dbxref=GeneID:7147454;gbkey=Gene;gene=garK;locus_tag=EC55989_3542
NC_011748.1	RefSeq	CDS	3625593	3626819	.	-	0	ID=cds3349;Name=YP_002404496.1;Parent=gene3611;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 20225875%2C 69151449%2C 9772162%3B Product type e : enzyme;Dbxref=Genbank:YP_002404496.1,GeneID:7147454;gbkey=CDS;product=glycerate kinase;protein_id=YP_002404496.1;transl_table=11
NC_011748.1	RefSeq	gene	3626835	3627725	.	-	.	ID=gene3612;Name=garR;Dbxref=GeneID:7146259;gbkey=Gene;gene=garR;locus_tag=EC55989_3543
NC_011748.1	RefSeq	CDS	3626835	3627725	.	-	0	ID=cds3350;Name=YP_002404497.1;Parent=gene3612;Note=catalyzes the reduction of tartronate semialdehyde to glycerate;Dbxref=Genbank:YP_002404497.1,GeneID:7146259;gbkey=CDS;product=tartronate semialdehyde reductase;protein_id=YP_002404497.1;transl_table=11
NC_011748.1	RefSeq	gene	3627755	3628525	.	-	.	ID=gene3613;Name=garL;Dbxref=GeneID:7146262;gbkey=Gene;gene=garL;locus_tag=EC55989_3544
NC_011748.1	RefSeq	CDS	3627755	3628525	.	-	0	ID=cds3351;Name=YP_002404498.1;Parent=gene3613;Note=cleaves 5-dehydro-4-deoxy-glucarate and 2-dehydro-3-deoxy-D-glucarate;Dbxref=Genbank:YP_002404498.1,GeneID:7146262;gbkey=CDS;product=alpha-dehydro-beta-deoxy-D-glucarate aldolase;protein_id=YP_002404498.1;transl_table=11
NC_011748.1	RefSeq	gene	3628541	3629875	.	-	.	ID=gene3614;Name=garP;Dbxref=GeneID:7146260;gbkey=Gene;gene=garP;locus_tag=EC55989_3545
NC_011748.1	RefSeq	CDS	3628541	3629875	.	-	0	ID=cds3352;Name=YP_002404499.1;Parent=gene3614;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 10762278%2C 9772162%3B Product type pt :  transporter;Dbxref=Genbank:YP_002404499.1,GeneID:7146260;gbkey=CDS;product=%28D%29-galactarate transporter;protein_id=YP_002404499.1;transl_table=11
NC_011748.1	RefSeq	gene	3630249	3631820	.	+	.	ID=gene3615;Name=garD;Dbxref=GeneID:7146261;gbkey=Gene;gene=garD;locus_tag=EC55989_3546
NC_011748.1	RefSeq	CDS	3630249	3631820	.	+	0	ID=cds3353;Name=YP_002404500.1;Parent=gene3615;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 20225875%2C 66096392%2C 81027430%2C 9772162%2C 10762278%2C 2407727%3B Product type e : enzyme;Dbxref=Genbank:YP_002404500.1,GeneID:7146261;gbkey=CDS;product=%28D%29-galactarate dehydrogenase;protein_id=YP_002404500.1;transl_table=11
NC_011748.1	RefSeq	gene	3631969	3632304	.	+	.	ID=gene3616;Name=sohA;Dbxref=GeneID:7146258;gbkey=Gene;gene=sohA;locus_tag=EC55989_3547
NC_011748.1	RefSeq	CDS	3631969	3632304	.	+	0	ID=cds3354;Name=YP_002404501.1;Parent=gene3616;Note=SohA%3B PrlF%3B involved in protein secretion%3B when overproduced or mutated%2C it induces growth defect and increased export of a reporter protein%3B a PrlF mutation induces the activity of the Lon protease%2C and a Lon-deficient strain suppresses the phenotype conferred by the PrlF mutation;Dbxref=Genbank:YP_002404501.1,GeneID:7146258;gbkey=CDS;product=regulator PrlF;protein_id=YP_002404501.1;transl_table=11
NC_011748.1	RefSeq	gene	3632304	3632768	.	+	.	ID=gene3617;Name=yhaV;Dbxref=GeneID:7147674;gbkey=Gene;gene=yhaV;locus_tag=EC55989_3548
NC_011748.1	RefSeq	CDS	3632304	3632768	.	+	0	ID=cds3355;Name=YP_002404502.1;Parent=gene3617;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404502.1,GeneID:7147674;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404502.1;transl_table=11
NC_011748.1	RefSeq	gene	3632823	3633632	.	-	.	ID=gene3618;Name=agaR;Dbxref=GeneID:7148924;gbkey=Gene;gene=agaR;locus_tag=EC55989_3549
NC_011748.1	RefSeq	CDS	3632823	3633632	.	-	0	ID=cds3356;Name=YP_002404503.1;Parent=gene3618;Note=transcriptional repressor for the agaZVWA and agaSYBCDI operons;Dbxref=Genbank:YP_002404503.1,GeneID:7148924;gbkey=CDS;product=DNA-binding transcriptional regulator AgaR;protein_id=YP_002404503.1;transl_table=11
NC_011748.1	RefSeq	gene	3633881	3635161	.	+	.	ID=gene3619;Name=kbaZ;Dbxref=GeneID:7145470;gbkey=Gene;gene=kbaZ;locus_tag=EC55989_3550
NC_011748.1	RefSeq	CDS	3633881	3635161	.	+	0	ID=cds3357;Name=YP_002404504.1;Parent=gene3619;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 11976750%2C 20392444%2C 10931310%2C 8932697%3B Product type e : enzyme;Dbxref=Genbank:YP_002404504.1,GeneID:7145470;gbkey=CDS;product=tagatose 6-phosphate aldolase 1%2C kbaZ subunit;protein_id=YP_002404504.1;transl_table=11
NC_011748.1	RefSeq	gene	3635184	3635657	.	+	.	ID=gene3620;Name=agaV;Dbxref=GeneID:7146648;gbkey=Gene;gene=agaV;locus_tag=EC55989_3551
NC_011748.1	RefSeq	CDS	3635184	3635657	.	+	0	ID=cds3358;Name=YP_002404505.1;Parent=gene3620;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel for the sugar uptake%3Binvolved in N-acetylgalactosamine transport;Dbxref=Genbank:YP_002404505.1,GeneID:7146648;gbkey=CDS;product=PTS system N-acetylgalactosamine-specific transporter subunit IIB;protein_id=YP_002404505.1;transl_table=11
NC_011748.1	RefSeq	gene	3635668	3636447	.	+	.	ID=gene3621;Name=EC55989_3552;Dbxref=GeneID:7145472;gbkey=Gene;locus_tag=EC55989_3552
NC_011748.1	RefSeq	CDS	3635668	3636447	.	+	0	ID=cds3359;Name=YP_002404506.1;Parent=gene3621;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002404506.1,GeneID:7145472;gbkey=CDS;product=enzyme IIC component of PTS;protein_id=YP_002404506.1;transl_table=11
NC_011748.1	RefSeq	gene	3636431	3637315	.	+	.	ID=gene3622;Name=EC55989_3553;Dbxref=GeneID:7145002;gbkey=Gene;locus_tag=EC55989_3553
NC_011748.1	RefSeq	CDS	3636431	3637315	.	+	0	ID=cds3360;Name=YP_002404507.1;Parent=gene3622;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002404507.1,GeneID:7145002;gbkey=CDS;product=hexose%2Fhexosamine family PTS permease IID component;protein_id=YP_002404507.1;transl_table=11
NC_011748.1	RefSeq	gene	3637333	3637767	.	+	.	ID=gene3623;Name=EC55989_3554;Dbxref=GeneID:7145003;gbkey=Gene;locus_tag=EC55989_3554
NC_011748.1	RefSeq	CDS	3637333	3637767	.	+	0	ID=cds3361;Name=YP_002404508.1;Parent=gene3623;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002404508.1,GeneID:7145003;gbkey=CDS;product=phosphotransferase system enzyme subunit %28N-acetyl-galactosamine %2F galactosamine PTS system enzyme IIA component%29;protein_id=YP_002404508.1;transl_table=11
NC_011748.1	RefSeq	gene	3637743	3638897	.	+	.	ID=gene3624;Name=agaA;Dbxref=GeneID:7145004;gbkey=Gene;gene=agaA;locus_tag=EC55989_3555
NC_011748.1	RefSeq	CDS	3637743	3638897	.	+	0	ID=cds3362;Name=YP_002404509.1;Parent=gene3624;Note=Evidence 2b : Function of strongly homologous gene%3B Product type e : enzyme;Dbxref=Genbank:YP_002404509.1,GeneID:7145004;gbkey=CDS;product=N-acetylglucosamine-6-phosphate deacetylase %28GlcNAc 6-P deacetylase%29;protein_id=YP_002404509.1;transl_table=11
NC_011748.1	RefSeq	gene	3639247	3640401	.	+	.	ID=gene3625;Name=agaS;Dbxref=GeneID:7145465;gbkey=Gene;gene=agaS;locus_tag=EC55989_3556
NC_011748.1	RefSeq	CDS	3639247	3640401	.	+	0	ID=cds3363;Name=YP_002404510.1;Parent=gene3625;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 9689210%2C 9697096%2C 14731281%2C 8932697%3B Product type e : enzyme;Dbxref=Genbank:YP_002404510.1,GeneID:7145465;gbkey=CDS;product=tagatose-6-phosphate ketose%2Faldose isomerase;protein_id=YP_002404510.1;transl_table=11
NC_011748.1	RefSeq	gene	3640414	3641274	.	+	.	ID=gene3626;Name=kbaY;Dbxref=GeneID:7145471;gbkey=Gene;gene=kbaY;locus_tag=EC55989_3557
NC_011748.1	RefSeq	CDS	3640414	3641274	.	+	0	ID=cds3364;Name=YP_002404511.1;Parent=gene3626;Note=catalyzes the reversible reaction of dihydroxyacetone phosphate with glyceraldehyde 3-phosphate to produce tagatose 1%2C6-bisphosphate%3B in enteric bacteria there are two D-tagatose 1%2C6-bisphosphate-specific aldolases: KbaY %28also called AgaY%29%2C involved in catabolism of N-acetyl-galactosamine and D-galactosamine%2C and GatY which is part of the galactitol catabolism pathway;Dbxref=Genbank:YP_002404511.1,GeneID:7145471;gbkey=CDS;product=tagatose-bisphosphate aldolase;protein_id=YP_002404511.1;transl_table=11
NC_011748.1	RefSeq	gene	3641441	3641917	.	+	.	ID=gene3627;Name=agaB;Dbxref=GeneID:7146647;gbkey=Gene;gene=agaB;locus_tag=EC55989_3558
NC_011748.1	RefSeq	CDS	3641441	3641917	.	+	0	ID=cds3365;Name=YP_002404512.1;Parent=gene3627;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel for the sugar uptake%3B involved in N-acetylgalactosamine transport;Dbxref=Genbank:YP_002404512.1,GeneID:7146647;gbkey=CDS;product=PTS system N-acetylgalactosamine-specific transporter subunit IIB;protein_id=YP_002404512.1;transl_table=11
NC_011748.1	RefSeq	gene	3641956	3642759	.	+	.	ID=gene3628;Name=agaC;Dbxref=GeneID:7145466;gbkey=Gene;gene=agaC;locus_tag=EC55989_3559
NC_011748.1	RefSeq	CDS	3641956	3642759	.	+	0	ID=cds3366;Name=YP_002404513.1;Parent=gene3628;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3Bprotein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel for the sugar uptake%3B involved in N-acetylgalactosamine transport;Dbxref=Genbank:YP_002404513.1,GeneID:7145466;gbkey=CDS;product=PTS system N-acetylgalactosamine-specific transporter subunit IIC;protein_id=YP_002404513.1;transl_table=11
NC_011748.1	RefSeq	gene	3642749	3643540	.	+	.	ID=gene3629;Name=agaD;Dbxref=GeneID:7145467;gbkey=Gene;gene=agaD;locus_tag=EC55989_3560
NC_011748.1	RefSeq	CDS	3642749	3643540	.	+	0	ID=cds3367;Name=YP_002404514.1;Parent=gene3629;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B involved in N-acetylgalactosamine transport;Dbxref=Genbank:YP_002404514.1,GeneID:7145467;gbkey=CDS;product=PTS system N-acetylgalactosamine-specific transporter subunit IID;protein_id=YP_002404514.1;transl_table=11
NC_011748.1	RefSeq	gene	3643541	3644296	.	+	.	ID=gene3630;Name=agaI;Dbxref=GeneID:7145468;gbkey=Gene;gene=agaI;locus_tag=EC55989_3561
NC_011748.1	RefSeq	CDS	3643541	3644296	.	+	0	ID=cds3368;Name=YP_002404515.1;Parent=gene3630;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 10931310%3B Product type e : enzyme;Dbxref=Genbank:YP_002404515.1,GeneID:7145468;gbkey=CDS;product=galactosamine-6-phosphate isomerase;protein_id=YP_002404515.1;transl_table=11
NC_011748.1	RefSeq	gene	3644696	3645280	.	+	.	ID=gene3631;Name=yraH;Dbxref=GeneID:7145469;gbkey=Gene;gene=yraH;locus_tag=EC55989_3562
NC_011748.1	RefSeq	CDS	3644696	3645280	.	+	0	ID=cds3369;Name=YP_002404516.1;Parent=gene3631;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type ps :  structure;Dbxref=Genbank:YP_002404516.1,GeneID:7145469;gbkey=CDS;product=fimbrial-like adhesin protein;protein_id=YP_002404516.1;transl_table=11
NC_011748.1	RefSeq	gene	3645360	3646055	.	+	.	ID=gene3632;Name=yraI;Dbxref=GeneID:7149436;gbkey=Gene;gene=yraI;locus_tag=EC55989_3563
NC_011748.1	RefSeq	CDS	3645360	3646055	.	+	0	ID=cds3370;Name=YP_002404517.1;Parent=gene3632;Note=Evidence 2b : Function of strongly homologous gene%3B PubMedId : 11677609%3B Product type f : factor;Dbxref=Genbank:YP_002404517.1,GeneID:7149436;gbkey=CDS;product=periplasmic pilin chaperone %28lpfB-like%29;protein_id=YP_002404517.1;transl_table=11
NC_011748.1	RefSeq	gene	3646085	3648601	.	+	.	ID=gene3633;Name=yraJ;Dbxref=GeneID:7149437;gbkey=Gene;gene=yraJ;locus_tag=EC55989_3564
NC_011748.1	RefSeq	CDS	3646085	3648601	.	+	0	ID=cds3371;Name=YP_002404518.1;Parent=gene3633;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002404518.1,GeneID:7149437;gbkey=CDS;product=outer membrane protein;protein_id=YP_002404518.1;transl_table=11
NC_011748.1	RefSeq	gene	3648612	3649703	.	+	.	ID=gene3634;Name=yraK;Dbxref=GeneID:7149438;gbkey=Gene;gene=yraK;locus_tag=EC55989_3565
NC_011748.1	RefSeq	CDS	3648612	3649703	.	+	0	ID=cds3372;Name=YP_002404519.1;Parent=gene3634;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type ps :  structure;Dbxref=Genbank:YP_002404519.1,GeneID:7149438;gbkey=CDS;product=fimbrial-like adhesin protein %28lpfD-like%29;protein_id=YP_002404519.1;transl_table=11
NC_011748.1	RefSeq	gene	3649746	3650606	.	-	.	ID=gene3635;Name=yraL;Dbxref=GeneID:7149439;gbkey=Gene;gene=yraL;locus_tag=EC55989_3566
NC_011748.1	RefSeq	CDS	3649746	3650606	.	-	0	ID=cds3373;Name=YP_002404520.1;Parent=gene3635;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002404520.1,GeneID:7149439;gbkey=CDS;product=methyltransferase;protein_id=YP_002404520.1;transl_table=11
NC_011748.1	RefSeq	gene	3650670	3652706	.	+	.	ID=gene3636;Name=yraM;Dbxref=GeneID:7149440;gbkey=Gene;gene=yraM;locus_tag=EC55989_3567
NC_011748.1	RefSeq	CDS	3650670	3652706	.	+	0	ID=cds3374;Name=YP_002404521.1;Parent=gene3636;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404521.1,GeneID:7149440;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404521.1;transl_table=11
NC_011748.1	RefSeq	gene	3652664	3653059	.	+	.	ID=gene3637;Name=yraN;Dbxref=GeneID:7149441;gbkey=Gene;gene=yraN;locus_tag=EC55989_3568
NC_011748.1	RefSeq	CDS	3652664	3653059	.	+	0	ID=cds3375;Name=YP_002404522.1;Parent=gene3637;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404522.1,GeneID:7149441;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404522.1;transl_table=11
NC_011748.1	RefSeq	gene	3653079	3653669	.	+	.	ID=gene3638;Name=yraO;Dbxref=GeneID:7149442;gbkey=Gene;gene=yraO;locus_tag=EC55989_3569
NC_011748.1	RefSeq	CDS	3653079	3653669	.	+	0	ID=cds3376;Name=YP_002404523.1;Parent=gene3638;Note=Required for the timely initiation of chromosomal replication via direct interactions with the dnaA initiator protein;Dbxref=Genbank:YP_002404523.1,GeneID:7149442;gbkey=CDS;product=DnaA initiator-associating protein DiaA;protein_id=YP_002404523.1;transl_table=11
NC_011748.1	RefSeq	gene	3653679	3654254	.	+	.	ID=gene3639;Name=ecfH;Dbxref=GeneID:7149443;gbkey=Gene;gene=ecfH;locus_tag=EC55989_3570
NC_011748.1	RefSeq	CDS	3653679	3654254	.	+	0	ID=cds3377;Name=YP_002404524.1;Parent=gene3639;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 11274153;Dbxref=Genbank:YP_002404524.1,GeneID:7149443;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404524.1;transl_table=11
NC_011748.1	RefSeq	gene	3654368	3655408	.	-	.	ID=gene3640;Name=yraQ;Dbxref=GeneID:7145970;gbkey=Gene;gene=yraQ;locus_tag=EC55989_3571
NC_011748.1	RefSeq	CDS	3654368	3655408	.	-	0	ID=cds3378;Name=YP_002404525.1;Parent=gene3640;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002404525.1,GeneID:7145970;gbkey=CDS;product=permease;protein_id=YP_002404525.1;transl_table=11
NC_011748.1	RefSeq	gene	3655481	3656116	.	-	.	ID=gene3641;Name=yraR;Dbxref=GeneID:7149444;gbkey=Gene;gene=yraR;locus_tag=EC55989_3572
NC_011748.1	RefSeq	CDS	3655481	3656116	.	-	0	ID=cds3379;Name=YP_002404526.1;Parent=gene3641;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002404526.1,GeneID:7149444;gbkey=CDS;product=nucleoside-diphosphate-sugar epimerase;protein_id=YP_002404526.1;transl_table=11
NC_011748.1	RefSeq	gene	3656244	3656762	.	+	.	ID=gene3642;Name=yhbO;Dbxref=GeneID:7149445;gbkey=Gene;gene=yhbO;locus_tag=EC55989_3573
NC_011748.1	RefSeq	CDS	3656244	3656762	.	+	0	ID=cds3380;Name=YP_002404527.1;Parent=gene3642;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002404527.1,GeneID:7149445;gbkey=CDS;product=intracellular protease;protein_id=YP_002404527.1;transl_table=11
NC_011748.1	RefSeq	gene	3656742	3657185	.	-	.	ID=gene3643;Name=yhbP;Dbxref=GeneID:7148929;gbkey=Gene;gene=yhbP;locus_tag=EC55989_3574
NC_011748.1	RefSeq	CDS	3656742	3657185	.	-	0	ID=cds3381;Name=YP_002404528.1;Parent=gene3643;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404528.1,GeneID:7148929;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404528.1;transl_table=11
NC_011748.1	RefSeq	gene	3657236	3657538	.	+	.	ID=gene3644;Name=yhbQ;Dbxref=GeneID:7148930;gbkey=Gene;gene=yhbQ;locus_tag=EC55989_3575
NC_011748.1	RefSeq	CDS	3657236	3657538	.	+	0	ID=cds3382;Name=YP_002404529.1;Parent=gene3644;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002404529.1,GeneID:7148930;gbkey=CDS;product=GIY-YIG nuclease superfamily protein;protein_id=YP_002404529.1;transl_table=11
NC_011748.1	RefSeq	gene	3657525	3658028	.	-	.	ID=gene3645;Name=yhbS;Dbxref=GeneID:7148931;gbkey=Gene;gene=yhbS;locus_tag=EC55989_3576
NC_011748.1	RefSeq	CDS	3657525	3658028	.	-	0	ID=cds3383;Name=YP_002404530.1;Parent=gene3645;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002404530.1,GeneID:7148931;gbkey=CDS;product=acyltransferase with acyl-CoA N-acyltransferase domain;protein_id=YP_002404530.1;transl_table=11
NC_011748.1	RefSeq	gene	3658022	3658546	.	-	.	ID=gene3646;Name=yhbT;Dbxref=GeneID:7148932;gbkey=Gene;gene=yhbT;locus_tag=EC55989_3577
NC_011748.1	RefSeq	CDS	3658022	3658546	.	-	0	ID=cds3384;Name=YP_002404531.1;Parent=gene3646;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pc :  carrier;Dbxref=Genbank:YP_002404531.1,GeneID:7148932;gbkey=CDS;product=lipid carrier protein;protein_id=YP_002404531.1;transl_table=11
NC_011748.1	RefSeq	gene	3658755	3659750	.	+	.	ID=gene3647;Name=yhbU;Dbxref=GeneID:7148933;gbkey=Gene;gene=yhbU;locus_tag=EC55989_3578
NC_011748.1	RefSeq	CDS	3658755	3659750	.	+	0	ID=cds3385;Name=YP_002404532.1;Parent=gene3647;Note=Evidence 2b : Function of strongly homologous gene%3B PubMedId : 10206698%3B Product type e : enzyme;Dbxref=Genbank:YP_002404532.1,GeneID:7148933;gbkey=CDS;product=peptidase %28collagenase-like%29;protein_id=YP_002404532.1;transl_table=11
NC_011748.1	RefSeq	gene	3659759	3660637	.	+	.	ID=gene3648;Name=yhbV;Dbxref=GeneID:7148934;gbkey=Gene;gene=yhbV;locus_tag=EC55989_3579
NC_011748.1	RefSeq	CDS	3659759	3660637	.	+	0	ID=cds3386;Name=YP_002404533.1;Parent=gene3648;Note=Evidence 2b : Function of strongly homologous gene%3B PubMedId : 10206698%3B Product type e : enzyme;Dbxref=Genbank:YP_002404533.1,GeneID:7148934;gbkey=CDS;product=protease;protein_id=YP_002404533.1;transl_table=11
NC_011748.1	RefSeq	gene	3660843	3661850	.	+	.	ID=gene3649;Name=yhbW;Dbxref=GeneID:7148935;gbkey=Gene;gene=yhbW;locus_tag=EC55989_3580
NC_011748.1	RefSeq	CDS	3660843	3661850	.	+	0	ID=cds3387;Name=YP_002404534.1;Parent=gene3649;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002404534.1,GeneID:7148935;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404534.1;transl_table=11
NC_011748.1	RefSeq	gene	3661968	3663212	.	-	.	ID=gene3650;Name=mtr;Dbxref=GeneID:7148936;gbkey=Gene;gene=mtr;locus_tag=EC55989_3581
NC_011748.1	RefSeq	CDS	3661968	3663212	.	-	0	ID=cds3388;Name=YP_002404535.1;Parent=gene3650;Note=tryptophan transporter of high affinity;Dbxref=Genbank:YP_002404535.1,GeneID:7148936;gbkey=CDS;product=tryptophan permease;protein_id=YP_002404535.1;transl_table=11
NC_011748.1	RefSeq	gene	3663366	3665255	.	-	.	ID=gene3651;Name=deaD;Dbxref=GeneID:7146917;gbkey=Gene;gene=deaD;locus_tag=EC55989_3582
NC_011748.1	RefSeq	CDS	3663366	3665255	.	-	0	ID=cds3389;Name=YP_002404536.1;Parent=gene3651;Note=participates in the assembly of the large subunit of the ribosome%3B plays a key role in optimal cell growth at low temperature and is required for normal cell division;Dbxref=Genbank:YP_002404536.1,GeneID:7146917;gbkey=CDS;product=ATP-dependent RNA helicase DeaD;protein_id=YP_002404536.1;transl_table=11
NC_011748.1	RefSeq	gene	3665435	3666319	.	-	.	ID=gene3652;Name=nlpI;Dbxref=GeneID:7145875;gbkey=Gene;gene=nlpI;locus_tag=EC55989_3583
NC_011748.1	RefSeq	CDS	3665435	3666319	.	-	0	ID=cds3390;Name=YP_002404537.1;Parent=gene3652;Note=lipoprotein that appears to be involved in cell division%3B interacts with the periplasmic protease Prc and may be activated by protease processing;Dbxref=Genbank:YP_002404537.1,GeneID:7145875;gbkey=CDS;product=lipoprotein NlpI;protein_id=YP_002404537.1;transl_table=11
NC_011748.1	RefSeq	gene	3666428	3668632	.	-	.	ID=gene3653;Name=pnp;Dbxref=GeneID:7147011;gbkey=Gene;gene=pnp;locus_tag=EC55989_3584
NC_011748.1	RefSeq	CDS	3666428	3668632	.	-	0	ID=cds3391;Name=YP_002404538.1;Parent=gene3653;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 87083499%2C 91198209%2C 99234021%2C 99340204%2C 2432069%2C 3005122%2C 6382163%2C 9008164%2C 9298646%3B Product type e : enzyme;Dbxref=Genbank:YP_002404538.1,GeneID:7147011;gbkey=CDS;product=polynucleotide phosphorylase;protein_id=YP_002404538.1;transl_table=11
NC_011748.1	RefSeq	gene	3668620	3668793	.	+	.	ID=gene3654;Name=sraG;Dbxref=GeneID:7147203;gbkey=Gene;gene=sraG;locus_tag=EC55989_misc_RNA_83
NC_011748.1	RefSeq	transcript	3668620	3668793	.	+	.	ID=rna151;Parent=gene3654;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 11448770%3B Product type n : RNA;Dbxref=GeneID:7147203;gbkey=misc_RNA;product=SraG
NC_011748.1	RefSeq	exon	3668620	3668793	.	+	.	ID=id303;Parent=rna151;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 11448770%3B Product type n : RNA;Dbxref=GeneID:7147203;gbkey=misc_RNA;product=SraG
NC_011748.1	RefSeq	gene	3668810	3669079	.	-	.	ID=gene3655;Name=rpsO;Dbxref=GeneID:7147701;gbkey=Gene;gene=rpsO;locus_tag=EC55989_3585
NC_011748.1	RefSeq	CDS	3668810	3669079	.	-	0	ID=cds3392;Name=YP_002404539.1;Parent=gene3655;Note=primary rRNA binding protein%3B helps nucleate assembly of 30S%3B binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA%3B autoregulates translation through interactions with the mRNA leader sequence;Dbxref=Genbank:YP_002404539.1,GeneID:7147701;gbkey=CDS;product=30S ribosomal protein S15;protein_id=YP_002404539.1;transl_table=11
NC_011748.1	RefSeq	gene	3669228	3670172	.	-	.	ID=gene3656;Name=truB;Dbxref=GeneID:7147519;gbkey=Gene;gene=truB;locus_tag=EC55989_3586
NC_011748.1	RefSeq	CDS	3669228	3670172	.	-	0	ID=cds3393;Name=YP_002404540.1;Parent=gene3656;Note=catalyzes isomerization of specific uridines in RNA to pseudouridine%3B responsible for residues in T loops of many tRNAs;Dbxref=Genbank:YP_002404540.1,GeneID:7147519;gbkey=CDS;product=tRNA pseudouridine synthase B;protein_id=YP_002404540.1;transl_table=11
NC_011748.1	RefSeq	gene	3670172	3670573	.	-	.	ID=gene3657;Name=rbfA;Dbxref=GeneID:7147859;gbkey=Gene;gene=rbfA;locus_tag=EC55989_3587
NC_011748.1	RefSeq	CDS	3670172	3670573	.	-	0	ID=cds3394;Name=YP_002404541.1;Parent=gene3657;Note=associates with free 30S ribosomal subunits%3B essential for efficient processing of 16S rRNA%3B in Escherichia coli rbfA is induced by cold shock;Dbxref=Genbank:YP_002404541.1,GeneID:7147859;gbkey=CDS;product=ribosome-binding factor A;protein_id=YP_002404541.1;transl_table=11
NC_011748.1	RefSeq	gene	3670737	3673409	.	-	.	ID=gene3658;Name=infB;Dbxref=GeneID:7147339;gbkey=Gene;gene=infB;locus_tag=EC55989_3588
NC_011748.1	RefSeq	CDS	3670737	3673409	.	-	0	ID=cds3395;Name=YP_002404542.1;Parent=gene3658;Note=Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex;Dbxref=Genbank:YP_002404542.1,GeneID:7147339;gbkey=CDS;product=translation initiation factor IF-2;protein_id=YP_002404542.1;transl_table=11
NC_011748.1	RefSeq	gene	3673434	3674921	.	-	.	ID=gene3659;Name=nusA;Dbxref=GeneID:7146566;gbkey=Gene;gene=nusA;locus_tag=EC55989_3589
NC_011748.1	RefSeq	CDS	3673434	3674921	.	-	0	ID=cds3396;Name=YP_002404543.1;Parent=gene3659;Note=modifies transcription through interactions with RNA polymerase affecting elongation%2C readthrough%2C termination%2C and antitermination;Dbxref=Genbank:YP_002404543.1,GeneID:7146566;gbkey=CDS;product=transcription elongation factor NusA;protein_id=YP_002404543.1;transl_table=11
NC_011748.1	RefSeq	gene	3674949	3675401	.	-	.	ID=gene3660;Name=yhbC;Dbxref=GeneID:7147058;gbkey=Gene;gene=yhbC;locus_tag=EC55989_3590
NC_011748.1	RefSeq	CDS	3674949	3675401	.	-	0	ID=cds3397;Name=YP_002404544.1;Parent=gene3660;Note=in Streptococcus pneumoniae this gene was found to be essential%3B structure determination of the Streptococcus protein shows that it is similar to a number of other proteins;Dbxref=Genbank:YP_002404544.1,GeneID:7147058;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404544.1;transl_table=11
NC_011748.1	RefSeq	gene	3675608	3675684	.	-	.	ID=gene3661;Name=EC55989_tRNA65;Dbxref=GeneID:7148925;gbkey=Gene;locus_tag=EC55989_tRNA65
NC_011748.1	RefSeq	tRNA	3675608	3675684	.	-	.	ID=rna152;Dbxref=GeneID:7148925;gbkey=tRNA;product=tRNA-Met
NC_011748.1	RefSeq	exon	3675608	3675684	.	-	.	ID=id304;Parent=rna152;Dbxref=GeneID:7148925;gbkey=tRNA;product=tRNA-Met
NC_011748.1	RefSeq	gene	3676032	3677375	.	+	.	ID=gene3662;Name=argG;Dbxref=GeneID:7145378;gbkey=Gene;gene=argG;locus_tag=EC55989_3591
NC_011748.1	RefSeq	CDS	3676032	3677375	.	+	0	ID=cds3398;Name=YP_002404545.1;Parent=gene3662;Note=catalyzes the formation of arginosuccinate from citrulline and aspartate in arginine biosynthesis;Dbxref=Genbank:YP_002404545.1,GeneID:7145378;gbkey=CDS;product=argininosuccinate synthase;protein_id=YP_002404545.1;transl_table=11
NC_011748.1	RefSeq	gene	3677383	3679008	.	-	.	ID=gene3663;Name=yhbX;Dbxref=GeneID:7145529;gbkey=Gene;gene=yhbX;locus_tag=EC55989_3592
NC_011748.1	RefSeq	CDS	3677383	3679008	.	-	0	ID=cds3399;Name=YP_002404546.1;Parent=gene3663;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002404546.1,GeneID:7145529;gbkey=CDS;product=hydrolase%2C inner membrane;protein_id=YP_002404546.1;transl_table=11
NC_011748.1	RefSeq	gene	3679465	3679551	.	-	.	ID=gene3664;Name=EC55989_tRNA64;Dbxref=GeneID:7148937;gbkey=Gene;locus_tag=EC55989_tRNA64
NC_011748.1	RefSeq	tRNA	3679465	3679551	.	-	.	ID=rna153;Dbxref=GeneID:7148937;gbkey=tRNA;product=tRNA-Leu
NC_011748.1	RefSeq	exon	3679465	3679551	.	-	.	ID=id305;Parent=rna153;Dbxref=GeneID:7148937;gbkey=tRNA;product=tRNA-Leu
NC_011748.1	RefSeq	gene	3679566	3679898	.	-	.	ID=gene3665;Name=secG;Dbxref=GeneID:7145377;gbkey=Gene;gene=secG;locus_tag=EC55989_3593
NC_011748.1	RefSeq	CDS	3679566	3679898	.	-	0	ID=cds3400;Name=YP_002404547.1;Parent=gene3665;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 20194819%2C 21125563%2C 9020118%2C 94074540%2C 9564033%2C 9644254%2C 9829959%2C 99298179%2C 7556084%2C 8034620%2C 8045257%2C 8244950%2C 8253068%3B Product type t : transporter;Dbxref=Genbank:YP_002404547.1,GeneID:7145377;gbkey=CDS;product=preprotein translocase subunit SecG;protein_id=YP_002404547.1;transl_table=11
NC_011748.1	RefSeq	gene	3680126	3681463	.	-	.	ID=gene3666;Name=glmM;Dbxref=GeneID:7147625;gbkey=Gene;gene=glmM;locus_tag=EC55989_3594
NC_011748.1	RefSeq	CDS	3680126	3681463	.	-	0	ID=cds3401;Name=YP_002404548.1;Parent=gene3666;Note=catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate;Dbxref=Genbank:YP_002404548.1,GeneID:7147625;gbkey=CDS;product=phosphoglucosamine mutase;protein_id=YP_002404548.1;transl_table=11
NC_011748.1	RefSeq	gene	3681456	3682304	.	-	.	ID=gene3667;Name=folP;Dbxref=GeneID:7146299;gbkey=Gene;gene=folP;locus_tag=EC55989_3595
NC_011748.1	RefSeq	CDS	3681456	3682304	.	-	0	ID=cds3402;Name=YP_002404549.1;Parent=gene3667;Note=catalyzes the formation of dihydropteroate from 2-amino-4-hydroxy-6-hydroxymethyl-7%2C8-dihydropteridine diphosphate and 4-aminobenzoate;Dbxref=Genbank:YP_002404549.1,GeneID:7146299;gbkey=CDS;product=dihydropteroate synthase;protein_id=YP_002404549.1;transl_table=11
NC_011748.1	RefSeq	gene	3682394	3684328	.	-	.	ID=gene3668;Name=hflB;Dbxref=GeneID:7146175;gbkey=Gene;gene=hflB;locus_tag=EC55989_3596
NC_011748.1	RefSeq	CDS	3682394	3684328	.	-	0	ID=cds3403;Name=YP_002404550.1;Parent=gene3668;Note=inner membrane metalloprotease%3B may be involved in degradation of aberrant cytoplasmic and membrane proteins;Dbxref=Genbank:YP_002404550.1,GeneID:7146175;gbkey=CDS;product=ATP-dependent metalloprotease;protein_id=YP_002404550.1;transl_table=11
NC_011748.1	RefSeq	gene	3684428	3685057	.	-	.	ID=gene3669;Name=rrmJ;Dbxref=GeneID:7146213;gbkey=Gene;gene=rrmJ;locus_tag=EC55989_3597
NC_011748.1	RefSeq	CDS	3684428	3685057	.	-	0	ID=cds3404;Name=YP_002404551.1;Parent=gene3669;Note=Specifically methylates the uridine in position 2552 of 23S rRNA in the fully assembled 50S ribosomal subunit;Dbxref=Genbank:YP_002404551.1,GeneID:7146213;gbkey=CDS;product=23S rRNA methyltransferase;protein_id=YP_002404551.1;transl_table=11
NC_011748.1	RefSeq	gene	3685183	3685476	.	+	.	ID=gene3670;Name=yhbY;Dbxref=GeneID:7147528;gbkey=Gene;gene=yhbY;locus_tag=EC55989_3598
NC_011748.1	RefSeq	CDS	3685183	3685476	.	+	0	ID=cds3405;Name=YP_002404552.1;Parent=gene3670;Note=RNA binding protein found associated to pre-50S subunit of the ribosome%3B role in ribosome assembly%3B necessary for optimal growth but not cell viability;Dbxref=Genbank:YP_002404552.1,GeneID:7147528;gbkey=CDS;product=RNA-binding protein YhbY;protein_id=YP_002404552.1;transl_table=11
NC_011748.1	RefSeq	gene	3685632	3686108	.	-	.	ID=gene3671;Name=greA;Dbxref=GeneID:7148938;gbkey=Gene;gene=greA;locus_tag=EC55989_3599
NC_011748.1	RefSeq	CDS	3685632	3686108	.	-	0	ID=cds3406;Name=YP_002404553.1;Parent=gene3671;Note=necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites%3B arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through%2C resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3%27terminus;Dbxref=Genbank:YP_002404553.1,GeneID:7148938;gbkey=CDS;product=transcription elongation factor GreA;protein_id=YP_002404553.1;transl_table=11
NC_011748.1	RefSeq	gene	3686356	3687789	.	+	.	ID=gene3672;Name=dacB;Dbxref=GeneID:7146365;gbkey=Gene;gene=dacB;locus_tag=EC55989_3600
NC_011748.1	RefSeq	CDS	3686356	3687789	.	+	0	ID=cds3407;Name=YP_002404554.1;Parent=gene3672;Note=penicillin binding protein 4%3B penicillin sensitive%3B catalyzes the formation of D-alanine from D-alanyl-D-alanine%3B one of four%2C DD-carboxypeptidase low-molecular weight penicillin-binding proteins that remove terminal D-alanine from pentapeptide side chains;Dbxref=Genbank:YP_002404554.1,GeneID:7146365;gbkey=CDS;product=D-alanyl-D-alanine carboxypeptidase;protein_id=YP_002404554.1;transl_table=11
NC_011748.1	RefSeq	gene	3687829	3689001	.	-	.	ID=gene3673;Name=obgE;Dbxref=GeneID:7145842;gbkey=Gene;gene=obgE;locus_tag=EC55989_3601
NC_011748.1	RefSeq	CDS	3687829	3689001	.	-	0	ID=cds3408;Name=YP_002404555.1;Parent=gene3673;Note=essential GTPase%3B exhibits high exchange rate for GTP%2FGDP%3B associates with 50S ribosomal subunit%3B involved in regulation of chromosomal replication;Dbxref=Genbank:YP_002404555.1,GeneID:7145842;gbkey=CDS;product=GTPase ObgE;protein_id=YP_002404555.1;transl_table=11
NC_011748.1	RefSeq	gene	3689017	3689982	.	-	.	ID=gene3674;Name=yhbE;Dbxref=GeneID:7147063;gbkey=Gene;gene=yhbE;locus_tag=EC55989_3602
NC_011748.1	RefSeq	CDS	3689017	3689982	.	-	0	ID=cds3409;Name=YP_002404556.1;Parent=gene3674;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002404556.1,GeneID:7147063;gbkey=CDS;product=inner membrane protein;protein_id=YP_002404556.1;transl_table=11
NC_011748.1	RefSeq	gene	3690109	3690366	.	-	.	ID=gene3675;Name=rpmA;Dbxref=GeneID:7148926;gbkey=Gene;gene=rpmA;locus_tag=EC55989_3603
NC_011748.1	RefSeq	CDS	3690109	3690366	.	-	0	ID=cds3410;Name=YP_002404557.1;Parent=gene3675;Note=involved in the peptidyltransferase reaction during translation;Dbxref=Genbank:YP_002404557.1,GeneID:7148926;gbkey=CDS;product=50S ribosomal protein L27;protein_id=YP_002404557.1;transl_table=11
NC_011748.1	RefSeq	gene	3690387	3690698	.	-	.	ID=gene3676;Name=rplU;Dbxref=GeneID:7147486;gbkey=Gene;gene=rplU;locus_tag=EC55989_3604
NC_011748.1	RefSeq	CDS	3690387	3690698	.	-	0	ID=cds3411;Name=YP_002404558.1;Parent=gene3676;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 91088242%2C 94146411%2C 10094780%2C 387076%2C 8312607%3B Product type s : structure;Dbxref=Genbank:YP_002404558.1,GeneID:7147486;gbkey=CDS;product=50S ribosomal protein L21;protein_id=YP_002404558.1;transl_table=11
NC_011748.1	RefSeq	gene	3690957	3691928	.	+	.	ID=gene3677;Name=ispB;Dbxref=GeneID:7147481;gbkey=Gene;gene=ispB;locus_tag=EC55989_3605
NC_011748.1	RefSeq	CDS	3690957	3691928	.	+	0	ID=cds3412;Name=YP_002404559.1;Parent=gene3677;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 94311902%2C 97284515%2C 2670911%2C 8037730%2C 8312607%3B Product type e : enzyme;Dbxref=Genbank:YP_002404559.1,GeneID:7147481;gbkey=CDS;product=octaprenyl diphosphate synthase;protein_id=YP_002404559.1;transl_table=11
NC_011748.1	RefSeq	gene	3692156	3692434	.	+	.	ID=gene3678;Name=sfsB;Dbxref=GeneID:7146626;gbkey=Gene;gene=sfsB;locus_tag=EC55989_3606
NC_011748.1	RefSeq	CDS	3692156	3692434	.	+	0	ID=cds3413;Name=YP_002404560.1;Parent=gene3678;Note=activator of maltose metabolism genes;Dbxref=Genbank:YP_002404560.1,GeneID:7146626;gbkey=CDS;product=DNA-binding transcriptional regulator Nlp;protein_id=YP_002404560.1;transl_table=11
NC_011748.1	RefSeq	gene	3692482	3693741	.	-	.	ID=gene3679;Name=murA;Dbxref=GeneID:7147646;gbkey=Gene;gene=murA;locus_tag=EC55989_3607
NC_011748.1	RefSeq	CDS	3692482	3693741	.	-	0	ID=cds3414;Name=YP_002404561.1;Parent=gene3679;Note=adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation%3B gram-positive bacteria have 2 copies of MurA which are active;Dbxref=Genbank:YP_002404561.1,GeneID:7147646;gbkey=CDS;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=YP_002404561.1;transl_table=11
NC_011748.1	RefSeq	gene	3693796	3694050	.	-	.	ID=gene3680;Name=yrbA;Dbxref=GeneID:7146921;gbkey=Gene;gene=yrbA;locus_tag=EC55989_3608
NC_011748.1	RefSeq	CDS	3693796	3694050	.	-	0	ID=cds3415;Name=YP_002404562.1;Parent=gene3680;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pr :  regulator;Dbxref=Genbank:YP_002404562.1,GeneID:7146921;gbkey=CDS;product=DNA-binding transcriptional regulator;protein_id=YP_002404562.1;transl_table=11
NC_011748.1	RefSeq	gene	3694210	3694503	.	-	.	ID=gene3681;Name=yrbB;Dbxref=GeneID:7149446;gbkey=Gene;gene=yrbB;locus_tag=EC55989_3609
NC_011748.1	RefSeq	CDS	3694210	3694503	.	-	0	ID=cds3416;Name=YP_002404563.1;Parent=gene3681;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404563.1,GeneID:7149446;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404563.1;transl_table=11
NC_011748.1	RefSeq	gene	3694503	3695138	.	-	.	ID=gene3682;Name=yrbC;Dbxref=GeneID:7149447;gbkey=Gene;gene=yrbC;locus_tag=EC55989_3610
NC_011748.1	RefSeq	CDS	3694503	3695138	.	-	0	ID=cds3417;Name=YP_002404564.1;Parent=gene3682;Note=Evidence 2b : Function of strongly homologous gene%3B PubMedId : 9658016%3B Product type t : transporter;Dbxref=Genbank:YP_002404564.1,GeneID:7149447;gbkey=CDS;product=toluene transporter subunit: membrane component of ABC superfamily;protein_id=YP_002404564.1;transl_table=11
NC_011748.1	RefSeq	gene	3695157	3695708	.	-	.	ID=gene3683;Name=yrbD;Dbxref=GeneID:7149448;gbkey=Gene;gene=yrbD;locus_tag=EC55989_3611
NC_011748.1	RefSeq	CDS	3695157	3695708	.	-	0	ID=cds3418;Name=YP_002404565.1;Parent=gene3683;Note=Evidence 2b : Function of strongly homologous gene%3B PubMedId : 9658016%3B Product type t : transporter;Dbxref=Genbank:YP_002404565.1,GeneID:7149448;gbkey=CDS;product=toluene transporter subunit: membrane component of ABC superfamily;protein_id=YP_002404565.1;transl_table=11
NC_011748.1	RefSeq	gene	3695713	3696495	.	-	.	ID=gene3684;Name=yrbE;Dbxref=GeneID:7149449;gbkey=Gene;gene=yrbE;locus_tag=EC55989_3612
NC_011748.1	RefSeq	CDS	3695713	3696495	.	-	0	ID=cds3419;Name=YP_002404566.1;Parent=gene3684;Note=Evidence 2b : Function of strongly homologous gene%3B PubMedId : 9658016%3B Product type t : transporter;Dbxref=Genbank:YP_002404566.1,GeneID:7149449;gbkey=CDS;product=toluene transporter subunit: membrane component of ABC superfamily;protein_id=YP_002404566.1;transl_table=11
NC_011748.1	RefSeq	gene	3696503	3697312	.	-	.	ID=gene3685;Name=yrbF;Dbxref=GeneID:7149450;gbkey=Gene;gene=yrbF;locus_tag=EC55989_3613
NC_011748.1	RefSeq	CDS	3696503	3697312	.	-	0	ID=cds3420;Name=YP_002404567.1;Parent=gene3685;Note=ATP-binding subunit of a  ABC toluene efflux transporter;Dbxref=Genbank:YP_002404567.1,GeneID:7149450;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=YP_002404567.1;transl_table=11
NC_011748.1	RefSeq	gene	3697522	3698499	.	+	.	ID=gene3686;Name=yrbG;Dbxref=GeneID:7149451;gbkey=Gene;gene=yrbG;locus_tag=EC55989_3614
NC_011748.1	RefSeq	CDS	3697522	3698499	.	+	0	ID=cds3421;Name=YP_002404568.1;Parent=gene3686;Note=YrbG%3B inner membrane protein involved in cell envelope integrity%3B sodium ion%2Fcalcium ion exchanger%3B in E. coli it is non essential for cell viability%3B member of the YRBG family of cation%2FCa2%2B exchangers;Dbxref=Genbank:YP_002404568.1,GeneID:7149451;gbkey=CDS;product=calcium%2Fsodium:proton antiporter;protein_id=YP_002404568.1;transl_table=11
NC_011748.1	RefSeq	gene	3698513	3699499	.	+	.	ID=gene3687;Name=kdsD;Dbxref=GeneID:7149452;gbkey=Gene;gene=kdsD;locus_tag=EC55989_3615
NC_011748.1	RefSeq	CDS	3698513	3699499	.	+	0	ID=cds3422;Name=YP_002404569.1;Parent=gene3687;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 12805358%3B Product type e : enzyme;Dbxref=Genbank:YP_002404569.1,GeneID:7149452;gbkey=CDS;product=D-arabinose 5-phosphate isomerase;protein_id=YP_002404569.1;transl_table=11
NC_011748.1	RefSeq	gene	3699520	3700086	.	+	.	ID=gene3688;Name=kdsC;Dbxref=GeneID:7146662;gbkey=Gene;gene=kdsC;locus_tag=EC55989_3616
NC_011748.1	RefSeq	CDS	3699520	3700086	.	+	0	ID=cds3423;Name=YP_002404570.1;Parent=gene3688;Note=forms homotetramers%3B catalyzes hydrolysis of KDO 8-P to KDO and inorganic phosphate%3B functions in lipopolysaccharide biosynthesis;Dbxref=Genbank:YP_002404570.1,GeneID:7146662;gbkey=CDS;product=3-deoxy-D-manno-octulosonate 8-phosphate phosphatase;protein_id=YP_002404570.1;transl_table=11
NC_011748.1	RefSeq	gene	3700083	3700658	.	+	.	ID=gene3689;Name=yrbK;Dbxref=GeneID:7146661;gbkey=Gene;gene=yrbK;locus_tag=EC55989_3617
NC_011748.1	RefSeq	CDS	3700083	3700658	.	+	0	ID=cds3424;Name=YP_002404571.1;Parent=gene3689;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404571.1,GeneID:7146661;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404571.1;transl_table=11
NC_011748.1	RefSeq	gene	3700627	3701184	.	+	.	ID=gene3690;Name=lptA;Dbxref=GeneID:7149453;gbkey=Gene;gene=lptA;locus_tag=EC55989_3618
NC_011748.1	RefSeq	CDS	3700627	3701184	.	+	0	ID=cds3425;Name=YP_002404572.1;Parent=gene3690;Note=LptA%3B periplasmic binding protein part of a  ABC superfamily of uptake transporters%3B interacts with LptB protein%2C the ATP binding component of the uptake system;Dbxref=Genbank:YP_002404572.1,GeneID:7149453;gbkey=CDS;product=lipopolysaccharide transport periplasmic protein LptA;protein_id=YP_002404572.1;transl_table=11
NC_011748.1	RefSeq	gene	3701191	3701916	.	+	.	ID=gene3691;Name=lptB;Dbxref=GeneID:7146733;gbkey=Gene;gene=lptB;locus_tag=EC55989_3619
NC_011748.1	RefSeq	CDS	3701191	3701916	.	+	0	ID=cds3426;Name=YP_002404573.1;Parent=gene3691;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 7876255%2C 9298646%2C 17056748%3B Product type pt :  transporter;Dbxref=Genbank:YP_002404573.1,GeneID:7146733;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=YP_002404573.1;transl_table=11
NC_011748.1	RefSeq	gene	3701964	3703397	.	+	.	ID=gene3692;Name=rpoN;Dbxref=GeneID:7146734;gbkey=Gene;gene=rpoN;locus_tag=EC55989_3620
NC_011748.1	RefSeq	CDS	3701964	3703397	.	+	0	ID=cds3427;Name=YP_002404574.1;Parent=gene3692;Note=sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released%3B sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism%3B the rhizobia often have 2 copies of this sigma factor%3B in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation%3B in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions%2C rpoN1 gene was regulated in response to oxygen;Dbxref=Genbank:YP_002404574.1,GeneID:7146734;gbkey=CDS;product=RNA polymerase factor sigma-54;protein_id=YP_002404574.1;transl_table=11
NC_011748.1	RefSeq	gene	3703420	3703707	.	+	.	ID=gene3693;Name=yhbH;Dbxref=GeneID:7147501;gbkey=Gene;gene=yhbH;locus_tag=EC55989_3621
NC_011748.1	RefSeq	CDS	3703420	3703707	.	+	0	ID=cds3428;Name=YP_002404575.1;Parent=gene3693;Note=YhbH%3B resting ribosome-binding protein involved in ribosome stabilization and preservation in stationary phase%3B binds specifically 100S ribosomes %28an inactive ribosome product of a 70S ribosome dimerization%29%3B seems to be involved in modulation of the sigma%2854%29 %28RpoN%29 activity for quorum sensing;Dbxref=Genbank:YP_002404575.1,GeneID:7147501;gbkey=CDS;product=sigma%2854%29 modulation protein;protein_id=YP_002404575.1;transl_table=11
NC_011748.1	RefSeq	gene	3703825	3704316	.	+	.	ID=gene3694;Name=ptsN;Dbxref=GeneID:7148927;gbkey=Gene;gene=ptsN;locus_tag=EC55989_3622
NC_011748.1	RefSeq	CDS	3703825	3704316	.	+	0	ID=cds3429;Name=YP_002404576.1;Parent=gene3694;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 88212176%2C 90136533%2C 90274974%2C 95020584%2C 95181483%2C 7876255%2C 8025669%2C 8444818%2C 9636714%3B Product type t : transporter;Dbxref=Genbank:YP_002404576.1,GeneID:7148927;gbkey=CDS;product=PTS system transporter subunit IIA-like nitrogen-regulatory protein PtsN;protein_id=YP_002404576.1;transl_table=11
NC_011748.1	RefSeq	gene	3704362	3705216	.	+	.	ID=gene3695;Name=yhbJ;Dbxref=GeneID:7147290;gbkey=Gene;gene=yhbJ;locus_tag=EC55989_3623
NC_011748.1	RefSeq	CDS	3704362	3705216	.	+	0	ID=cds3430;Name=YP_002404577.1;Parent=gene3695;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404577.1,GeneID:7147290;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404577.1;transl_table=11
NC_011748.1	RefSeq	gene	3705213	3705485	.	+	.	ID=gene3696;Name=npr;Dbxref=GeneID:7148928;gbkey=Gene;gene=npr;locus_tag=EC55989_3624
NC_011748.1	RefSeq	CDS	3705213	3705485	.	+	0	ID=cds3431;Name=YP_002404578.1;Parent=gene3696;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 10473571%2C 95181483%2C 7876255%2C 8025669%3B Product type t : transporter;Dbxref=Genbank:YP_002404578.1,GeneID:7148928;gbkey=CDS;product=phosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system %28Npr%29;protein_id=YP_002404578.1;transl_table=11
NC_011748.1	RefSeq	gene	3705698	3706330	.	+	.	ID=gene3697;Name=yrbL;Dbxref=GeneID:7147017;gbkey=Gene;gene=yrbL;locus_tag=EC55989_3625
NC_011748.1	RefSeq	CDS	3705698	3706330	.	+	0	ID=cds3432;Name=YP_002404579.1;Parent=gene3697;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 89083480;Dbxref=Genbank:YP_002404579.1,GeneID:7147017;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404579.1;transl_table=11
NC_011748.1	RefSeq	gene	3706327	3707055	.	-	.	ID=gene3698;Name=mtgA;Dbxref=GeneID:7149454;gbkey=Gene;gene=mtgA;locus_tag=EC55989_3626
NC_011748.1	RefSeq	CDS	3706327	3707055	.	-	0	ID=cds3433;Name=YP_002404580.1;Parent=gene3698;Note=glycosyltransferase%3B polymerizes glycan strands in the peptidoglycan;Dbxref=Genbank:YP_002404580.1,GeneID:7149454;gbkey=CDS;product=monofunctional biosynthetic peptidoglycan transglycosylase;protein_id=YP_002404580.1;transl_table=11
NC_011748.1	RefSeq	gene	3707052	3707705	.	-	.	ID=gene3699;Name=elbB;Dbxref=GeneID:7146913;gbkey=Gene;gene=elbB;locus_tag=EC55989_3627
NC_011748.1	RefSeq	CDS	3707052	3707705	.	-	0	ID=cds3434;Name=YP_002404581.1;Parent=gene3699;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 92246944%2C 98269038%2C 1575737%2C 9603997%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002404581.1,GeneID:7146913;gbkey=CDS;product=isoprenoid biosynthesis protein with amidotransferase-like domain;protein_id=YP_002404581.1;transl_table=11
NC_011748.1	RefSeq	gene	3707823	3707943	.	+	.	ID=gene3700;Name=ryhA;Dbxref=GeneID:7145988;gbkey=Gene;gene=ryhA;locus_tag=EC55989_misc_RNA_84
NC_011748.1	RefSeq	transcript	3707823	3707943	.	+	.	ID=rna154;Parent=gene3700;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 11445539%3B Product type n : RNA;Dbxref=GeneID:7145988;gbkey=misc_RNA;product=RyhA
NC_011748.1	RefSeq	exon	3707823	3707943	.	+	.	ID=id306;Parent=rna154;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 11445539%3B Product type n : RNA;Dbxref=GeneID:7145988;gbkey=misc_RNA;product=RyhA
NC_011748.1	RefSeq	gene	3707935	3710271	.	-	.	ID=gene3701;Name=arcB;Dbxref=GeneID:7147591;gbkey=Gene;gene=arcB;locus_tag=EC55989_3628
NC_011748.1	RefSeq	CDS	3707935	3710271	.	-	0	ID=cds3435;Name=YP_002404582.1;Parent=gene3701;Note=sensor-regulator protein which regulates the expression of many genes in response to respiratory growth conditions including anaerobic repression of the arc modulon%3B hybrid sensory histidine kinase in two-component regulatory system with ArcA;Dbxref=Genbank:YP_002404582.1,GeneID:7147591;gbkey=CDS;product=aerobic respiration control sensor protein ArcB;protein_id=YP_002404582.1;transl_table=11
NC_011748.1	RefSeq	gene	3710367	3711296	.	-	.	ID=gene3702;Name=yhcC;Dbxref=GeneID:7145523;gbkey=Gene;gene=yhcC;locus_tag=EC55989_3629
NC_011748.1	RefSeq	CDS	3710367	3711296	.	-	0	ID=cds3436;Name=YP_002404583.1;Parent=gene3702;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002404583.1,GeneID:7145523;gbkey=CDS;product=Fe-S oxidoreductase;protein_id=YP_002404583.1;transl_table=11
NC_011748.1	RefSeq	gene	3711878	3716431	.	+	.	ID=gene3703;Name=gltB;Dbxref=GeneID:7148940;gbkey=Gene;gene=gltB;locus_tag=EC55989_3630
NC_011748.1	RefSeq	CDS	3711878	3716431	.	+	0	ID=cds3437;Name=YP_002404584.1;Parent=gene3703;Note=catalyzes the formation of glutamate from glutamine and alpha-ketoglutarate;Dbxref=Genbank:YP_002404584.1,GeneID:7148940;gbkey=CDS;product=glutamate synthase subunit alpha;protein_id=YP_002404584.1;transl_table=11
NC_011748.1	RefSeq	gene	3716444	3717862	.	+	.	ID=gene3704;Name=gltD;Dbxref=GeneID:7146328;gbkey=Gene;gene=gltD;locus_tag=EC55989_3631
NC_011748.1	RefSeq	CDS	3716444	3717862	.	+	0	ID=cds3438;Name=YP_002404585.1;Parent=gene3704;Note=glutamate synthase is composed of subunits alpha and beta%3B beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase%3B provides electrons to the alpha subunit%2C which binds L-glutamine and 2-oxoglutarate and forms L-glutamate;Dbxref=Genbank:YP_002404585.1,GeneID:7146328;gbkey=CDS;product=glutamate synthase subunit beta;protein_id=YP_002404585.1;transl_table=11
NC_011748.1	RefSeq	gene	3718046	3718525	.	+	.	ID=gene3705;Name=yhcG;Dbxref=GeneID:7146329;gbkey=Gene;gene=yhcG;locus_tag=EC55989_3632;pseudo=true
NC_011748.1	RefSeq	region	3718046	3718525	.	+	.	ID=id307;Note=fragment of conserved hypothetical protein %28partial%29%3BEvidence 7 : Gene remnant;Dbxref=GeneID:7146329;gbkey=misc_feature
NC_011748.1	RefSeq	gene	3718506	3718847	.	+	.	ID=gene3706;Name=EC55989_3633;Dbxref=GeneID:7148941;gbkey=Gene;locus_tag=EC55989_3633
NC_011748.1	RefSeq	CDS	3718506	3718847	.	+	0	ID=cds3439;Name=YP_002404586.1;Parent=gene3706;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404586.1,GeneID:7148941;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404586.1;transl_table=11
NC_011748.1	RefSeq	gene	3718923	3719387	.	-	.	ID=gene3707;Name=yhcH;Dbxref=GeneID:7145005;gbkey=Gene;gene=yhcH;locus_tag=EC55989_3634
NC_011748.1	RefSeq	CDS	3718923	3719387	.	-	0	ID=cds3440;Name=YP_002404587.1;Parent=gene3707;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404587.1,GeneID:7145005;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404587.1;transl_table=11
NC_011748.1	RefSeq	gene	3719384	3720259	.	-	.	ID=gene3708;Name=nanK;Dbxref=GeneID:7148942;gbkey=Gene;gene=nanK;locus_tag=EC55989_3635
NC_011748.1	RefSeq	CDS	3719384	3720259	.	-	0	ID=cds3441;Name=YP_002404588.1;Parent=gene3708;Note=catalyzes the phosphorylation of the N-acetylmannosamine %28ManNAc%29 liberated from N-acetyl-neuraminic acid by the nanA protein;Dbxref=Genbank:YP_002404588.1,GeneID:7148942;gbkey=CDS;product=N-acetylmannosamine kinase;protein_id=YP_002404588.1;transl_table=11
NC_011748.1	RefSeq	gene	3720256	3720945	.	-	.	ID=gene3709;Name=nanE;Dbxref=GeneID:7146957;gbkey=Gene;gene=nanE;locus_tag=EC55989_3636
NC_011748.1	RefSeq	CDS	3720256	3720945	.	-	0	ID=cds3442;Name=YP_002404589.1;Parent=gene3709;Note=Converts N-acetylmannosamine-6-phosphate to N-acetylglucosamine-6-phosphate;Dbxref=Genbank:YP_002404589.1,GeneID:7146957;gbkey=CDS;product=N-acetylmannosamine-6-phosphate 2-epimerase;protein_id=YP_002404589.1;transl_table=11
NC_011748.1	RefSeq	gene	3720993	3722483	.	-	.	ID=gene3710;Name=nanT;Dbxref=GeneID:7146955;gbkey=Gene;gene=nanT;locus_tag=EC55989_3637
NC_011748.1	RefSeq	CDS	3720993	3722483	.	-	0	ID=cds3443;Name=YP_002404590.1;Parent=gene3710;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 96011396%2C 9864311%2C 7592358%3B Product type t : transporter;Dbxref=Genbank:YP_002404590.1,GeneID:7146955;gbkey=CDS;product=sialic acid transporter;protein_id=YP_002404590.1;transl_table=11
NC_011748.1	RefSeq	gene	3722592	3723485	.	-	.	ID=gene3711;Name=nanA;Dbxref=GeneID:7146959;gbkey=Gene;gene=nanA;locus_tag=EC55989_3638
NC_011748.1	RefSeq	CDS	3722592	3723485	.	-	0	ID=cds3444;Name=YP_002404591.1;Parent=gene3711;Note=catalyzes the formation of pyruvate and N-acetylmannosamine from N-acetylneuraminic acid;Dbxref=Genbank:YP_002404591.1,GeneID:7146959;gbkey=CDS;product=N-acetylneuraminate lyase;protein_id=YP_002404591.1;transl_table=11
NC_011748.1	RefSeq	gene	3723607	3724398	.	-	.	ID=gene3712;Name=nanR;Dbxref=GeneID:7146954;gbkey=Gene;gene=nanR;locus_tag=EC55989_3639
NC_011748.1	RefSeq	CDS	3723607	3724398	.	-	0	ID=cds3445;Name=YP_002404592.1;Parent=gene3712;Note=Transcriptional repressor of the nan operon that encodes proteins involved in sialic acid utilization;Dbxref=Genbank:YP_002404592.1,GeneID:7146954;gbkey=CDS;product=transcriptional regulator NanR;protein_id=YP_002404592.1;transl_table=11
NC_011748.1	RefSeq	gene	3724778	3726145	.	+	.	ID=gene3713;Name=dcuD;Dbxref=GeneID:7146958;gbkey=Gene;gene=dcuD;locus_tag=EC55989_3640
NC_011748.1	RefSeq	CDS	3724778	3726145	.	+	0	ID=cds3446;Name=YP_002404593.1;Parent=gene3713;Note=YhcL%3B uncharacterized member of the DcuC family of anaerobic dicarboxylate transporters%3B probable role in transport of carboxylates across the inner membrane from the periplasm%3B its encoding gene is not essential for growth and is probably cryptic;Dbxref=Genbank:YP_002404593.1,GeneID:7146958;gbkey=CDS;product=cryptic C4-dicarboxylate transporter DcuD;protein_id=YP_002404593.1;transl_table=11
NC_011748.1	RefSeq	gene	3726188	3726685	.	-	.	ID=gene3714;Name=sspB;Dbxref=GeneID:7145863;gbkey=Gene;gene=sspB;locus_tag=EC55989_3641
NC_011748.1	RefSeq	CDS	3726188	3726685	.	-	0	ID=cds3447;Name=YP_002404594.1;Parent=gene3714;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 12445774%2C 94293773%2C 1721886%2C 3029697%2C 8022275%3B Product type f : factor;Dbxref=Genbank:YP_002404594.1,GeneID:7145863;gbkey=CDS;product=ClpXP protease specificity-enhancing factor;protein_id=YP_002404594.1;transl_table=11
NC_011748.1	RefSeq	gene	3726691	3727329	.	-	.	ID=gene3715;Name=sspA;Dbxref=GeneID:7147715;gbkey=Gene;gene=sspA;locus_tag=EC55989_3642
NC_011748.1	RefSeq	CDS	3726691	3727329	.	-	0	ID=cds3448;Name=YP_002404595.1;Parent=gene3715;Note=transcriptional activator%3B required for activation of bacteriophage P1 late promoter%3B induced by starvation;Dbxref=Genbank:YP_002404595.1,GeneID:7147715;gbkey=CDS;product=stringent starvation protein A;protein_id=YP_002404595.1;transl_table=11
NC_011748.1	RefSeq	gene	3727724	3728116	.	-	.	ID=gene3716;Name=rpsI;Dbxref=GeneID:7147714;gbkey=Gene;gene=rpsI;locus_tag=EC55989_3643
NC_011748.1	RefSeq	CDS	3727724	3728116	.	-	0	ID=cds3449;Name=YP_002404596.1;Parent=gene3716;Note=forms a direct contact with the tRNA during translation;Dbxref=Genbank:YP_002404596.1,GeneID:7147714;gbkey=CDS;product=30S ribosomal protein S9;protein_id=YP_002404596.1;transl_table=11
NC_011748.1	RefSeq	gene	3728132	3728560	.	-	.	ID=gene3717;Name=rplM;Dbxref=GeneID:7147513;gbkey=Gene;gene=rplM;locus_tag=EC55989_3644
NC_011748.1	RefSeq	CDS	3728132	3728560	.	-	0	ID=cds3450;Name=YP_002404597.1;Parent=gene3717;Note=in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit;Dbxref=Genbank:YP_002404597.1,GeneID:7147513;gbkey=CDS;product=50S ribosomal protein L13;protein_id=YP_002404597.1;transl_table=11
NC_011748.1	RefSeq	gene	3728779	3729906	.	-	.	ID=gene3718;Name=yhcM;Dbxref=GeneID:7147473;gbkey=Gene;gene=yhcM;locus_tag=EC55989_3645
NC_011748.1	RefSeq	CDS	3728779	3729906	.	-	0	ID=cds3451;Name=YP_002404598.1;Parent=gene3718;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404598.1,GeneID:7147473;gbkey=CDS;product=nucleoside triphosphate hydrolase domain;protein_id=YP_002404598.1;transl_table=11
NC_011748.1	RefSeq	gene	3730100	3730498	.	+	.	ID=gene3719;Name=yhcB;Dbxref=GeneID:7148943;gbkey=Gene;gene=yhcB;locus_tag=EC55989_3646
NC_011748.1	RefSeq	CDS	3730100	3730498	.	+	0	ID=cds3452;Name=YP_002404599.1;Parent=gene3719;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 16079137%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002404599.1,GeneID:7148943;gbkey=CDS;product=cytochrome d ubiquinol oxidase subunit III;protein_id=YP_002404599.1;transl_table=11
NC_011748.1	RefSeq	gene	3730652	3732019	.	+	.	ID=gene3720;Name=degQ;Dbxref=GeneID:7148939;gbkey=Gene;gene=degQ;locus_tag=EC55989_3647
NC_011748.1	RefSeq	CDS	3730652	3732019	.	+	0	ID=cds3453;Name=YP_002404600.1;Parent=gene3720;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 8830688%2C 96165272%2C 8576051%2C 8576052%2C 9740056%3B Product type e : enzyme;Dbxref=Genbank:YP_002404600.1,GeneID:7148939;gbkey=CDS;product=serine endoprotease;protein_id=YP_002404600.1;transl_table=11
NC_011748.1	RefSeq	gene	3732109	3733176	.	+	.	ID=gene3721;Name=degS;Dbxref=GeneID:7145880;gbkey=Gene;gene=degS;locus_tag=EC55989_3648
NC_011748.1	RefSeq	CDS	3732109	3733176	.	+	0	ID=cds3454;Name=YP_002404601.1;Parent=gene3721;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 15137941%2C 15225661%2C 21352996%2C 96165272%2C 99431977%2C 3322223%2C 8576051%3B Product type e : enzyme;Dbxref=Genbank:YP_002404601.1,GeneID:7145880;gbkey=CDS;product=serine endoprotease;protein_id=YP_002404601.1;transl_table=11
NC_011748.1	RefSeq	gene	3733239	3734177	.	-	.	ID=gene3722;Name=mdh;Dbxref=GeneID:7145881;gbkey=Gene;gene=mdh;locus_tag=EC55989_3649
NC_011748.1	RefSeq	CDS	3733239	3734177	.	-	0	ID=cds3455;Name=YP_002404602.1;Parent=gene3722;Note=oxidizes malate to oxaloacetate;Dbxref=Genbank:YP_002404602.1,GeneID:7145881;gbkey=CDS;product=malate dehydrogenase;protein_id=YP_002404602.1;transl_table=11
NC_011748.1	RefSeq	gene	3734612	3735082	.	+	.	ID=gene3723;Name=argR;Dbxref=GeneID:7146794;gbkey=Gene;gene=argR;locus_tag=EC55989_3650
NC_011748.1	RefSeq	CDS	3734612	3735082	.	+	0	ID=cds3456;Name=YP_002404603.1;Parent=gene3723;Note=regulates arginine biosynthesis when complexed with arginine by binding at site that overlap the promotors of the arginine biosynthesis genes;Dbxref=Genbank:YP_002404603.1,GeneID:7146794;gbkey=CDS;product=arginine repressor ArgR;protein_id=YP_002404603.1;transl_table=11
NC_011748.1	RefSeq	gene	3735447	3735710	.	+	.	ID=gene3724;Name=yhcN;Dbxref=GeneID:7145535;gbkey=Gene;gene=yhcN;locus_tag=EC55989_3651
NC_011748.1	RefSeq	CDS	3735447	3735710	.	+	0	ID=cds3457;Name=YP_002404604.1;Parent=gene3724;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404604.1,GeneID:7145535;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404604.1;transl_table=11
NC_011748.1	RefSeq	gene	3735766	3736038	.	-	.	ID=gene3725;Name=yhcO;Dbxref=GeneID:7148944;gbkey=Gene;gene=yhcO;locus_tag=EC55989_3652
NC_011748.1	RefSeq	CDS	3735766	3736038	.	-	0	ID=cds3458;Name=YP_002404605.1;Parent=gene3725;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pr :  regulator;Dbxref=Genbank:YP_002404605.1,GeneID:7148944;gbkey=CDS;product=barnase inhibitor;protein_id=YP_002404605.1;transl_table=11
NC_011748.1	RefSeq	gene	3736130	3738097	.	-	.	ID=gene3726;Name=aaeB;Dbxref=GeneID:7148945;gbkey=Gene;gene=aaeB;locus_tag=EC55989_3653
NC_011748.1	RefSeq	CDS	3736130	3738097	.	-	0	ID=cds3459;Name=YP_002404606.1;Parent=gene3726;Note=with AaeA forms an efflux pump whose substrates are p-hydroxybenzoic acid 6-hydroxy-2-naphthoic and 2-hydroxycinnamate;Dbxref=Genbank:YP_002404606.1,GeneID:7148945;gbkey=CDS;product=p-hydroxybenzoic acid efflux subunit AaeB;protein_id=YP_002404606.1;transl_table=11
NC_011748.1	RefSeq	gene	3738103	3739035	.	-	.	ID=gene3727;Name=aaeA;Dbxref=GeneID:7145413;gbkey=Gene;gene=aaeA;locus_tag=EC55989_3654
NC_011748.1	RefSeq	CDS	3738103	3739035	.	-	0	ID=cds3460;Name=YP_002404607.1;Parent=gene3727;Note=with AaeB forms an efflux pump whose substrates are p-hydroxybenzoic acid%2C 6-hydroxy-2-naphthoic and 2-hydroxycinnamate;Dbxref=Genbank:YP_002404607.1,GeneID:7145413;gbkey=CDS;product=p-hydroxybenzoic acid efflux subunit AaeA;protein_id=YP_002404607.1;transl_table=11
NC_011748.1	RefSeq	gene	3739043	3739246	.	-	.	ID=gene3728;Name=aaeX;Dbxref=GeneID:7145412;gbkey=Gene;gene=aaeX;locus_tag=EC55989_3655
NC_011748.1	RefSeq	CDS	3739043	3739246	.	-	0	ID=cds3461;Name=YP_002404608.1;Parent=gene3728;Note=membrane protein AaeX%3B the gene is a member of the aaeXAB operon;Dbxref=Genbank:YP_002404608.1,GeneID:7145412;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404608.1;transl_table=11
NC_011748.1	RefSeq	gene	3739429	3740358	.	+	.	ID=gene3729;Name=aaeR;Dbxref=GeneID:7145415;gbkey=Gene;gene=aaeR;locus_tag=EC55989_3656
NC_011748.1	RefSeq	CDS	3739429	3740358	.	+	0	ID=cds3462;Name=YP_002404609.1;Parent=gene3729;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 15489430%3B Product type r : regulator;Dbxref=Genbank:YP_002404609.1,GeneID:7145415;gbkey=CDS;product=DNA-binding transcriptional regulator;protein_id=YP_002404609.1;transl_table=11
NC_011748.1	RefSeq	gene	3740486	3741931	.	-	.	ID=gene3730;Name=tldD;Dbxref=GeneID:7145414;gbkey=Gene;gene=tldD;locus_tag=EC55989_3657
NC_011748.1	RefSeq	CDS	3740486	3741931	.	-	0	ID=cds3463;Name=YP_002404610.1;Parent=gene3730;Note=responsible for the proteolytic maturation of the E. coli pMccB17 plasmid-encoded microcin B17%2C an  protein that targets the essential topoisomerase II DNA gyrase%3B degrades the E. coli plasmid F-encoded CcdA;Dbxref=Genbank:YP_002404610.1,GeneID:7145414;gbkey=CDS;product=protease TldD;protein_id=YP_002404610.1;transl_table=11
NC_011748.1	RefSeq	gene	3742087	3745887	.	-	.	ID=gene3731;Name=yhdP;Dbxref=GeneID:7147806;gbkey=Gene;gene=yhdP;locus_tag=EC55989_3658
NC_011748.1	RefSeq	CDS	3742087	3745887	.	-	0	ID=cds3464;Name=YP_002404611.1;Parent=gene3731;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 10960106%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002404611.1,GeneID:7147806;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404611.1;transl_table=11
NC_011748.1	RefSeq	gene	3745955	3747424	.	-	.	ID=gene3732;Name=rng;Dbxref=GeneID:7148951;gbkey=Gene;gene=rng;locus_tag=EC55989_3659
NC_011748.1	RefSeq	CDS	3745955	3747424	.	-	0	ID=cds3465;Name=YP_002404612.1;Parent=gene3732;Note=involved in the processing of the 5%27end of 16S rRNA;Dbxref=Genbank:YP_002404612.1,GeneID:7148951;gbkey=CDS;product=ribonuclease G;protein_id=YP_002404612.1;transl_table=11
NC_011748.1	RefSeq	gene	3747414	3748007	.	-	.	ID=gene3733;Name=yhdE;Dbxref=GeneID:7147449;gbkey=Gene;gene=yhdE;locus_tag=EC55989_3660
NC_011748.1	RefSeq	CDS	3747414	3748007	.	-	0	ID=cds3466;Name=YP_002404613.1;Parent=gene3733;Note=Maf%3B overexpression in Bacillus subtilis inhibits septation in the dividing cell;Dbxref=Genbank:YP_002404613.1,GeneID:7147449;gbkey=CDS;product=Maf-like protein;protein_id=YP_002404613.1;transl_table=11
NC_011748.1	RefSeq	gene	3748016	3748504	.	-	.	ID=gene3734;Name=mreD;Dbxref=GeneID:7148946;gbkey=Gene;gene=mreD;locus_tag=EC55989_3661
NC_011748.1	RefSeq	CDS	3748016	3748504	.	-	0	ID=cds3467;Name=YP_002404614.1;Parent=gene3734;Note=part of cell wall structural complex MreBCD%3B transmembrane component;Dbxref=Genbank:YP_002404614.1,GeneID:7148946;gbkey=CDS;product=rod shape-determining protein MreD;protein_id=YP_002404614.1;transl_table=11
NC_011748.1	RefSeq	gene	3748488	3748619	.	-	.	ID=gene3735;Name=EC55989_3662;Dbxref=GeneID:7146904;gbkey=Gene;locus_tag=EC55989_3662
NC_011748.1	RefSeq	CDS	3748488	3748619	.	-	0	ID=cds3468;Name=YP_002404615.1;Parent=gene3735;Note=Evidence 6 : Doubtful CDS;Dbxref=Genbank:YP_002404615.1,GeneID:7146904;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404615.1;transl_table=11
NC_011748.1	RefSeq	gene	3748504	3749607	.	-	.	ID=gene3736;Name=mreC;Dbxref=GeneID:7145006;gbkey=Gene;gene=mreC;locus_tag=EC55989_3663
NC_011748.1	RefSeq	CDS	3748504	3749607	.	-	0	ID=cds3469;Name=YP_002404616.1;Parent=gene3736;Note=in some organisms this protein is a transmembrane protein while in others it is periplasmic%3B involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall;Dbxref=Genbank:YP_002404616.1,GeneID:7145006;gbkey=CDS;product=rod shape-determining protein MreC;protein_id=YP_002404616.1;transl_table=11
NC_011748.1	RefSeq	gene	3749673	3750716	.	-	.	ID=gene3737;Name=mreB;Dbxref=GeneID:7146903;gbkey=Gene;gene=mreB;locus_tag=EC55989_3664
NC_011748.1	RefSeq	CDS	3749673	3750716	.	-	0	ID=cds3470;Name=YP_002404617.1;Parent=gene3737;Note=functions in MreBCD complex in some organisms;Dbxref=Genbank:YP_002404617.1,GeneID:7146903;gbkey=CDS;product=rod shape-determining protein MreB;protein_id=YP_002404617.1;transl_table=11
NC_011748.1	RefSeq	gene	3750824	3751012	.	+	.	ID=gene3738;Name=EC55989_3665;Dbxref=GeneID:7146902;gbkey=Gene;locus_tag=EC55989_3665
NC_011748.1	RefSeq	CDS	3750824	3751012	.	+	0	ID=cds3471;Name=YP_002404618.1;Parent=gene3738;Note=Evidence 6 : Doubtful CDS;Dbxref=Genbank:YP_002404618.1,GeneID:7146902;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404618.1;transl_table=11
NC_011748.1	RefSeq	gene	3751021	3752961	.	-	.	ID=gene3739;Name=csrD;Dbxref=GeneID:7145007;gbkey=Gene;gene=csrD;locus_tag=EC55989_3666
NC_011748.1	RefSeq	CDS	3751021	3752961	.	-	0	ID=cds3472;Name=YP_002404619.1;Parent=gene3739;Note=regulates the degradation of the small RNAs CsrB and CsrC%3B may function to targate RNase E to specific RNA molecules;Dbxref=Genbank:YP_002404619.1,GeneID:7145007;gbkey=CDS;product=regulatory protein CsrD;protein_id=YP_002404619.1;transl_table=11
NC_011748.1	RefSeq	gene	3753113	3754087	.	+	.	ID=gene3740;Name=yhdH;Dbxref=GeneID:7145786;gbkey=Gene;gene=yhdH;locus_tag=EC55989_3667
NC_011748.1	RefSeq	CDS	3753113	3754087	.	+	0	ID=cds3473;Name=YP_002404620.1;Parent=gene3740;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002404620.1,GeneID:7145786;gbkey=CDS;product=oxidoreductase%2C Zn-dependent and NAD%28P%29-binding;protein_id=YP_002404620.1;transl_table=11
NC_011748.1	RefSeq	gene	3755065	3755535	.	+	.	ID=gene3741;Name=accB;Dbxref=GeneID:7148947;gbkey=Gene;gene=accB;locus_tag=EC55989_3669
NC_011748.1	RefSeq	CDS	3755065	3755535	.	+	0	ID=cds3474;Name=YP_002404621.1;Parent=gene3741;Note=composes the biotin carboxyl carrier protein subunit of the acetyl-CoA carboxylase complex%2C the enzyme that catalyzes the carboxylation of acetyl-CoA to malonyl-CoA%2C which in turn controls the rate of fatty acid metabolism;Dbxref=Genbank:YP_002404621.1,GeneID:7148947;gbkey=CDS;product=acetyl-CoA carboxylase biotin carboxyl carrier protein subunit;protein_id=YP_002404621.1;transl_table=11
NC_011748.1	RefSeq	gene	3755546	3756895	.	+	.	ID=gene3742;Name=accC;Dbxref=GeneID:7145429;gbkey=Gene;gene=accC;locus_tag=EC55989_3670
NC_011748.1	RefSeq	CDS	3755546	3756895	.	+	0	ID=cds3475;Name=YP_002404622.1;Parent=gene3742;Note=an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase%2C an enzyme that catalyzes the formation of malonyl-CoA%2C which in turn controls the rate of fatty acid metabolism;Dbxref=Genbank:YP_002404622.1,GeneID:7145429;gbkey=CDS;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=YP_002404622.1;transl_table=11
NC_011748.1	RefSeq	gene	3757004	3757246	.	+	.	ID=gene3743;Name=yhdT;Dbxref=GeneID:7145430;gbkey=Gene;gene=yhdT;locus_tag=EC55989_3671
NC_011748.1	RefSeq	CDS	3757004	3757246	.	+	0	ID=cds3476;Name=YP_002404623.1;Parent=gene3743;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002404623.1,GeneID:7145430;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404623.1;transl_table=11
NC_011748.1	RefSeq	gene	3757236	3758687	.	+	.	ID=gene3744;Name=panF;Dbxref=GeneID:7148952;gbkey=Gene;gene=panF;locus_tag=EC55989_3672
NC_011748.1	RefSeq	CDS	3757236	3758687	.	+	0	ID=cds3477;Name=YP_002404624.1;Parent=gene3744;Note=mediates high affinitiy panthothenate transport which is stimulated by the presence of sodium ions%3B member of SSS family of sodium%2Fsolute symporters%3B the imported panthothenate is phosphorylated by panthothenate kinase;Dbxref=Genbank:YP_002404624.1,GeneID:7148952;gbkey=CDS;product=sodium%2Fpanthothenate symporter;protein_id=YP_002404624.1;transl_table=11
NC_011748.1	RefSeq	gene	3758699	3759580	.	+	.	ID=gene3745;Name=prmA;Dbxref=GeneID:7147114;gbkey=Gene;gene=prmA;locus_tag=EC55989_3673
NC_011748.1	RefSeq	CDS	3758699	3759580	.	+	0	ID=cds3478;Name=YP_002404625.1;Parent=gene3745;Note=methylates ribosomal protein L11 at multiple amino acid positions%3B mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype;Dbxref=Genbank:YP_002404625.1,GeneID:7147114;gbkey=CDS;product=50S ribosomal protein L11 methyltransferase;protein_id=YP_002404625.1;transl_table=11
NC_011748.1	RefSeq	gene	3759909	3760874	.	+	.	ID=gene3746;Name=dusB;Dbxref=GeneID:7147249;gbkey=Gene;gene=dusB;locus_tag=EC55989_3674
NC_011748.1	RefSeq	CDS	3759909	3760874	.	+	0	ID=cds3479;Name=YP_002404626.1;Parent=gene3746;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 22095566%2C 1459953%2C 1547773%2C 2835774%2C 2837762%2C 8226664%3B Product type e : enzyme;Dbxref=Genbank:YP_002404626.1,GeneID:7147249;gbkey=CDS;product=tRNA-dihydrouridine synthase B;protein_id=YP_002404626.1;transl_table=11
NC_011748.1	RefSeq	gene	3760900	3761196	.	+	.	ID=gene3747;Name=fis;Dbxref=GeneID:7145960;gbkey=Gene;gene=fis;locus_tag=EC55989_3675
NC_011748.1	RefSeq	CDS	3760900	3761196	.	+	0	ID=cds3480;Name=YP_002404627.1;Parent=gene3747;Note=Stimulates excision of phage lambda%3B affects Mu development%3B acts as an activator of rRNA and iRNA transcription;Dbxref=Genbank:YP_002404627.1,GeneID:7145960;gbkey=CDS;product=DNA-binding protein Fis;protein_id=YP_002404627.1;transl_table=11
NC_011748.1	RefSeq	gene	3761282	3762166	.	+	.	ID=gene3748;Name=yhdJ;Dbxref=GeneID:7146113;gbkey=Gene;gene=yhdJ;locus_tag=EC55989_3676
NC_011748.1	RefSeq	CDS	3761282	3762166	.	+	0	ID=cds3481;Name=YP_002404628.1;Parent=gene3748;Note=Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism%3B PubMedId : 15028690%2C 9073062%3B Product type e : enzyme;Dbxref=Genbank:YP_002404628.1,GeneID:7146113;gbkey=CDS;product=methyltransferase;protein_id=YP_002404628.1;transl_table=11
NC_011748.1	RefSeq	gene	3762250	3762429	.	+	.	ID=gene3749;Name=yhdU;Dbxref=GeneID:7148948;gbkey=Gene;gene=yhdU;locus_tag=EC55989_3677
NC_011748.1	RefSeq	CDS	3762250	3762429	.	+	0	ID=cds3482;Name=YP_002404629.1;Parent=gene3749;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002404629.1,GeneID:7148948;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404629.1;transl_table=11
NC_011748.1	RefSeq	gene	3762432	3763094	.	-	.	ID=gene3750;Name=envR;Dbxref=GeneID:7148953;gbkey=Gene;gene=envR;locus_tag=EC55989_3678
NC_011748.1	RefSeq	CDS	3762432	3763094	.	-	0	ID=cds3483;Name=YP_002404630.1;Parent=gene3750;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 8203018%2C 11257026%2C 8407802%2C 1720861%3B Product type r : regulator;Dbxref=Genbank:YP_002404630.1,GeneID:7148953;gbkey=CDS;product=DNA-binding transcriptional regulator EnvR;protein_id=YP_002404630.1;transl_table=11
NC_011748.1	RefSeq	gene	3763493	3764650	.	+	.	ID=gene3751;Name=acrE;Dbxref=GeneID:7146006;gbkey=Gene;gene=acrE;locus_tag=EC55989_3679
NC_011748.1	RefSeq	CDS	3763493	3764650	.	+	0	ID=cds3484;Name=YP_002404631.1;Parent=gene3751;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 94012493%2C 1720861%3B Product type lp : lipoprotein;Dbxref=Genbank:YP_002404631.1,GeneID:7146006;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404631.1;transl_table=11
NC_011748.1	RefSeq	gene	3764662	3767766	.	+	.	ID=gene3752;Name=acrF;Dbxref=GeneID:7145447;gbkey=Gene;gene=acrF;locus_tag=EC55989_3680
NC_011748.1	RefSeq	CDS	3764662	3767766	.	+	0	ID=cds3485;Name=YP_002404632.1;Parent=gene3752;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 94262163%2C 99449638%2C 1720861%2C 8407802%3B Product type t : transporter;Dbxref=Genbank:YP_002404632.1,GeneID:7145447;gbkey=CDS;product=multidrug efflux system protein;protein_id=YP_002404632.1;transl_table=11
NC_011748.1	RefSeq	gene	3768019	3768240	.	+	.	ID=gene3753;Name=yhdV;Dbxref=GeneID:7145448;gbkey=Gene;gene=yhdV;locus_tag=EC55989_3681
NC_011748.1	RefSeq	CDS	3768019	3768240	.	+	0	ID=cds3486;Name=YP_002404633.1;Parent=gene3753;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002404633.1,GeneID:7145448;gbkey=CDS;product=outer membrane protein;protein_id=YP_002404633.1;transl_table=11
NC_011748.1	RefSeq	gene	3768466	3768642	.	+	.	ID=gene3754;Name=EC55989_3682;Dbxref=GeneID:7148954;gbkey=Gene;locus_tag=EC55989_3682
NC_011748.1	RefSeq	CDS	3768466	3768642	.	+	0	ID=cds3487;Name=YP_002404634.1;Parent=gene3754;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404634.1,GeneID:7148954;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404634.1;transl_table=11
NC_011748.1	RefSeq	gene	3768779	3769696	.	+	.	ID=gene3755;Name=aapJ;Dbxref=GeneID:7145008;gbkey=Gene;gene=aapJ;locus_tag=EC55989_3683
NC_011748.1	RefSeq	CDS	3768779	3769696	.	+	0	ID=cds3488;Name=YP_002404635.1;Parent=gene3755;Note=Evidence 2b : Function of strongly homologous gene%3B PubMedId : 8898392%3B Product type t : transporter;Dbxref=Genbank:YP_002404635.1,GeneID:7145008;gbkey=CDS;product=amino-acid transporter subunit %3B periplasmic-binding component of ABC superfamily;protein_id=YP_002404635.1;transl_table=11
NC_011748.1	RefSeq	gene	3769764	3770945	.	+	.	ID=gene3756;Name=aapQ;Dbxref=GeneID:7145416;gbkey=Gene;gene=aapQ;locus_tag=EC55989_3684
NC_011748.1	RefSeq	CDS	3769764	3770945	.	+	0	ID=cds3489;Name=YP_002404636.1;Parent=gene3756;Note=Evidence 2b : Function of strongly homologous gene%3B PubMedId : 8898392%3B Product type t : transporter;Dbxref=Genbank:YP_002404636.1,GeneID:7145416;gbkey=CDS;product=amino-acid transporter subunit %3B membrane component of ABC superfamily;protein_id=YP_002404636.1;transl_table=11
NC_011748.1	RefSeq	STS	3770487	3770597	.	+	.	ID=id308;Dbxref=UniSTS:141635,GeneID:7145416;gbkey=STS
NC_011748.1	RefSeq	gene	3770955	3772058	.	+	.	ID=gene3757;Name=aapM;Dbxref=GeneID:7145419;gbkey=Gene;gene=aapM;locus_tag=EC55989_3685
NC_011748.1	RefSeq	CDS	3770955	3772058	.	+	0	ID=cds3490;Name=YP_002404637.1;Parent=gene3757;Note=Evidence 2b : Function of strongly homologous gene%3B PubMedId : 8898392%3B Product type t : transporter;Dbxref=Genbank:YP_002404637.1,GeneID:7145419;gbkey=CDS;product=amino-acid transporter subunit %3B membrane component of ABC superfamily;protein_id=YP_002404637.1;transl_table=11
NC_011748.1	RefSeq	gene	3772066	3772824	.	+	.	ID=gene3758;Name=aapP;Dbxref=GeneID:7145417;gbkey=Gene;gene=aapP;locus_tag=EC55989_3686
NC_011748.1	RefSeq	CDS	3772066	3772824	.	+	0	ID=cds3491;Name=YP_002404638.1;Parent=gene3758;Note=Evidence 2b : Function of strongly homologous gene%3B PubMedId : 8809753%2C 8898392%3B Product type t : transporter;Dbxref=Genbank:YP_002404638.1,GeneID:7145417;gbkey=CDS;product=amino-acid ABC transporter ATP-binding protein;protein_id=YP_002404638.1;transl_table=11
NC_011748.1	RefSeq	gene	3773057	3773169	.	-	.	ID=gene3759;Name=EC55989_5S_2;Dbxref=GeneID:7145418;gbkey=Gene;locus_tag=EC55989_5S_2
NC_011748.1	RefSeq	rRNA	3773057	3773169	.	-	.	ID=rna155;Parent=gene3759;Dbxref=GeneID:7145418;gbkey=rRNA;product=ribosomal RNA 5S
NC_011748.1	RefSeq	exon	3773057	3773169	.	-	.	ID=id309;Parent=rna155;Dbxref=GeneID:7145418;gbkey=rRNA;product=ribosomal RNA 5S
NC_011748.1	RefSeq	gene	3773210	3773285	.	-	.	ID=gene3760;Name=EC55989_tRNA63;Dbxref=GeneID:7145288;gbkey=Gene;locus_tag=EC55989_tRNA63
NC_011748.1	RefSeq	tRNA	3773210	3773285	.	-	.	ID=rna156;Dbxref=GeneID:7145288;gbkey=tRNA;product=tRNA-Thr
NC_011748.1	RefSeq	exon	3773210	3773285	.	-	.	ID=id310;Parent=rna156;Dbxref=GeneID:7145288;gbkey=tRNA;product=tRNA-Thr
NC_011748.1	RefSeq	gene	3773298	3773417	.	-	.	ID=gene3761;Name=EC55989_5S_1;Dbxref=GeneID:7145376;gbkey=Gene;locus_tag=EC55989_5S_1
NC_011748.1	RefSeq	rRNA	3773298	3773417	.	-	.	ID=rna157;Parent=gene3761;Dbxref=GeneID:7145376;gbkey=rRNA;product=ribosomal RNA 5S
NC_011748.1	RefSeq	exon	3773298	3773417	.	-	.	ID=id311;Parent=rna157;Dbxref=GeneID:7145376;gbkey=rRNA;product=ribosomal RNA 5S
NC_011748.1	RefSeq	gene	3773511	3776414	.	-	.	ID=gene3762;Name=EC55989_23S_1;Dbxref=GeneID:7145287;gbkey=Gene;locus_tag=EC55989_23S_1
NC_011748.1	RefSeq	rRNA	3773511	3776414	.	-	.	ID=rna158;Parent=gene3762;Dbxref=GeneID:7145287;gbkey=rRNA;product=ribosomal RNA 23S
NC_011748.1	RefSeq	exon	3773511	3776414	.	-	.	ID=id312;Parent=rna158;Dbxref=GeneID:7145287;gbkey=rRNA;product=ribosomal RNA 23S
NC_011748.1	RefSeq	gene	3776598	3776673	.	-	.	ID=gene3763;Name=EC55989_tRNA62;Dbxref=GeneID:7144759;gbkey=Gene;locus_tag=EC55989_tRNA62
NC_011748.1	RefSeq	tRNA	3776598	3776673	.	-	.	ID=rna159;Dbxref=GeneID:7144759;gbkey=tRNA;product=tRNA-Ala
NC_011748.1	RefSeq	exon	3776598	3776673	.	-	.	ID=id313;Parent=rna159;Dbxref=GeneID:7144759;gbkey=tRNA;product=tRNA-Ala
NC_011748.1	RefSeq	gene	3776716	3776792	.	-	.	ID=gene3764;Name=EC55989_tRNA61;Dbxref=GeneID:7145375;gbkey=Gene;locus_tag=EC55989_tRNA61
NC_011748.1	RefSeq	tRNA	3776716	3776792	.	-	.	ID=rna160;Dbxref=GeneID:7145375;gbkey=tRNA;product=tRNA-Ile
NC_011748.1	RefSeq	exon	3776716	3776792	.	-	.	ID=id314;Parent=rna160;Dbxref=GeneID:7145375;gbkey=tRNA;product=tRNA-Ile
NC_011748.1	RefSeq	gene	3776861	3778402	.	-	.	ID=gene3765;Name=EC55989_16S_1;Dbxref=GeneID:7145374;gbkey=Gene;locus_tag=EC55989_16S_1
NC_011748.1	RefSeq	rRNA	3776861	3778402	.	-	.	ID=rna161;Parent=gene3765;Dbxref=GeneID:7145374;gbkey=rRNA;product=ribosomal RNA 16S
NC_011748.1	RefSeq	exon	3776861	3778402	.	-	.	ID=id315;Parent=rna161;Dbxref=GeneID:7145374;gbkey=rRNA;product=ribosomal RNA 16S
NC_011748.1	RefSeq	gene	3778874	3779428	.	+	.	ID=gene3766;Name=yrdA;Dbxref=GeneID:7144632;gbkey=Gene;gene=yrdA;locus_tag=EC55989_3696
NC_011748.1	RefSeq	CDS	3778874	3779428	.	+	0	ID=cds3492;Name=YP_002404639.1;Parent=gene3766;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404639.1,GeneID:7144632;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404639.1;transl_table=11
NC_011748.1	RefSeq	gene	3779404	3779661	.	-	.	ID=gene3767;Name=yrdB;Dbxref=GeneID:7149455;gbkey=Gene;gene=yrdB;locus_tag=EC55989_3697
NC_011748.1	RefSeq	CDS	3779404	3779661	.	-	0	ID=cds3493;Name=YP_002404640.1;Parent=gene3767;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404640.1,GeneID:7149455;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404640.1;transl_table=11
NC_011748.1	RefSeq	gene	3779658	3780476	.	-	.	ID=gene3768;Name=aroE;Dbxref=GeneID:7149456;gbkey=Gene;gene=aroE;locus_tag=EC55989_3698
NC_011748.1	RefSeq	CDS	3779658	3780476	.	-	0	ID=cds3494;Name=YP_002404641.1;Parent=gene3768;Note=AroE%3B catalyzes the conversion of shikimate to 3-dehydroshikimate;Dbxref=Genbank:YP_002404641.1,GeneID:7149456;gbkey=CDS;product=shikimate 5-dehydrogenase;protein_id=YP_002404641.1;transl_table=11
NC_011748.1	RefSeq	gene	3780481	3781053	.	-	.	ID=gene3769;Name=yrdC;Dbxref=GeneID:7145543;gbkey=Gene;gene=yrdC;locus_tag=EC55989_3699
NC_011748.1	RefSeq	CDS	3780481	3781053	.	-	0	ID=cds3495;Name=YP_002404642.1;Parent=gene3769;Note=RimN%3B YrdC%3B required for maturation of 16s RNA%3B binds preferentially double stranded RNA;Dbxref=Genbank:YP_002404642.1,GeneID:7145543;gbkey=CDS;product=ribosome maturation factor;protein_id=YP_002404642.1;transl_table=11
NC_011748.1	RefSeq	gene	3781058	3781600	.	-	.	ID=gene3770;Name=yrdD;Dbxref=GeneID:7149457;gbkey=Gene;gene=yrdD;locus_tag=EC55989_3700
NC_011748.1	RefSeq	CDS	3781058	3781600	.	-	0	ID=cds3496;Name=YP_002404643.1;Parent=gene3770;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002404643.1,GeneID:7149457;gbkey=CDS;product=DNA topoisomerase;protein_id=YP_002404643.1;transl_table=11
NC_011748.1	RefSeq	gene	3781629	3782102	.	-	.	ID=gene3771;Name=smg;Dbxref=GeneID:7149458;gbkey=Gene;gene=smg;locus_tag=EC55989_3701
NC_011748.1	RefSeq	CDS	3781629	3782102	.	-	0	ID=cds3497;Name=YP_002404644.1;Parent=gene3771;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 8432722;Dbxref=Genbank:YP_002404644.1,GeneID:7149458;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404644.1;transl_table=11
NC_011748.1	RefSeq	gene	3782074	3783198	.	-	.	ID=gene3772;Name=smf;Dbxref=GeneID:7147667;gbkey=Gene;gene=smf;locus_tag=EC55989_3702
NC_011748.1	RefSeq	CDS	3782074	3783198	.	-	0	ID=cds3498;Name=YP_002404645.1;Parent=gene3772;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 8112305%2C 8432722;Dbxref=Genbank:YP_002404645.1,GeneID:7147667;gbkey=CDS;product=DNA protecting protein DprA;protein_id=YP_002404645.1;transl_table=11
NC_011748.1	RefSeq	gene	3783328	3783837	.	+	.	ID=gene3773;Name=def;Dbxref=GeneID:7147666;gbkey=Gene;gene=def;locus_tag=EC55989_3703
NC_011748.1	RefSeq	CDS	3783328	3783837	.	+	0	ID=cds3499;Name=YP_002404646.1;Parent=gene3773;Note=cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins%3B binds iron%282%2B%29;Dbxref=Genbank:YP_002404646.1,GeneID:7147666;gbkey=CDS;product=peptide deformylase;protein_id=YP_002404646.1;transl_table=11
NC_011748.1	RefSeq	gene	3783852	3784799	.	+	.	ID=gene3774;Name=fmt;Dbxref=GeneID:7145878;gbkey=Gene;gene=fmt;locus_tag=EC55989_3704
NC_011748.1	RefSeq	CDS	3783852	3784799	.	+	0	ID=cds3500;Name=YP_002404647.1;Parent=gene3774;Note=modifies the free amino group of the aminoacyl moiety of methionyl-tRNA%28fMet%29 which is important in translation initiation%3B inactivation of this gene in Escherichia coli severely impairs growth;Dbxref=Genbank:YP_002404647.1,GeneID:7145878;gbkey=CDS;product=methionyl-tRNA formyltransferase;protein_id=YP_002404647.1;transl_table=11
NC_011748.1	RefSeq	gene	3784845	3786134	.	+	.	ID=gene3775;Name=rsmB;Dbxref=GeneID:7146164;gbkey=Gene;gene=rsmB;locus_tag=EC55989_3705
NC_011748.1	RefSeq	CDS	3784845	3786134	.	+	0	ID=cds3501;Name=YP_002404648.1;Parent=gene3775;Note=catalyzes the methylation of cytosine at position 967 %28m5C967%29 of 16S rRNA%3B SAM-dependent methyltransferase;Dbxref=Genbank:YP_002404648.1,GeneID:7146164;gbkey=CDS;product=16S rRNA methyltransferase GidB;protein_id=YP_002404648.1;transl_table=11
NC_011748.1	RefSeq	gene	3786156	3787532	.	+	.	ID=gene3776;Name=trkA;Dbxref=GeneID:7147535;gbkey=Gene;gene=trkA;locus_tag=EC55989_3706
NC_011748.1	RefSeq	CDS	3786156	3787532	.	+	0	ID=cds3502;Name=YP_002404649.1;Parent=gene3776;Note=involved in potassium uptake%3B found to be peripherally associated with the inner membrane in Escherichia coli%3B contains an NAD-binding domain;Dbxref=Genbank:YP_002404649.1,GeneID:7147535;gbkey=CDS;product=potassium transporter peripheral membrane protein;protein_id=YP_002404649.1;transl_table=11
NC_011748.1	RefSeq	gene	3787662	3788072	.	+	.	ID=gene3777;Name=mscL;Dbxref=GeneID:7147841;gbkey=Gene;gene=mscL;locus_tag=EC55989_3707
NC_011748.1	RefSeq	CDS	3787662	3788072	.	+	0	ID=cds3503;Name=YP_002404650.1;Parent=gene3777;Note=forms homopentamer%3B channel that opens in response to pressure or hypoosmotic shock;Dbxref=Genbank:YP_002404650.1,GeneID:7147841;gbkey=CDS;product=large-conductance mechanosensitive channel;protein_id=YP_002404650.1;transl_table=11
NC_011748.1	RefSeq	gene	3788069	3788287	.	-	.	ID=gene3778;Name=yhdL;Dbxref=GeneID:7146908;gbkey=Gene;gene=yhdL;locus_tag=EC55989_3708
NC_011748.1	RefSeq	CDS	3788069	3788287	.	-	0	ID=cds3504;Name=YP_002404651.1;Parent=gene3778;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404651.1,GeneID:7146908;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404651.1;transl_table=11
NC_011748.1	RefSeq	gene	3788343	3788768	.	-	.	ID=gene3779;Name=zntR;Dbxref=GeneID:7148949;gbkey=Gene;gene=zntR;locus_tag=EC55989_3709
NC_011748.1	RefSeq	CDS	3788343	3788768	.	-	0	ID=cds3505;Name=YP_002404652.1;Parent=gene3779;Note=mediates expression of the zinc export protein ZntA in response to high levels of zinc%3B member of MerR family of transcriptional regulators;Dbxref=Genbank:YP_002404652.1,GeneID:7148949;gbkey=CDS;product=zinc-responsive transcriptional regulator;protein_id=YP_002404652.1;transl_table=11
NC_011748.1	RefSeq	gene	3788779	3789147	.	-	.	ID=gene3780;Name=yhdN;Dbxref=GeneID:7149491;gbkey=Gene;gene=yhdN;locus_tag=EC55989_3710
NC_011748.1	RefSeq	CDS	3788779	3789147	.	-	0	ID=cds3506;Name=YP_002404653.1;Parent=gene3780;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404653.1,GeneID:7149491;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404653.1;transl_table=11
NC_011748.1	RefSeq	gene	3789254	3789637	.	-	.	ID=gene3781;Name=rplQ;Dbxref=GeneID:7148950;gbkey=Gene;gene=rplQ;locus_tag=EC55989_3711
NC_011748.1	RefSeq	CDS	3789254	3789637	.	-	0	ID=cds3507;Name=YP_002404654.1;Parent=gene3781;Note=is a component of the macrolide binding site in the peptidyl transferase center;Dbxref=Genbank:YP_002404654.1,GeneID:7148950;gbkey=CDS;product=50S ribosomal protein L17;protein_id=YP_002404654.1;transl_table=11
NC_011748.1	RefSeq	gene	3789678	3790667	.	-	.	ID=gene3782;Name=rpoA;Dbxref=GeneID:7147477;gbkey=Gene;gene=rpoA;locus_tag=EC55989_3712
NC_011748.1	RefSeq	CDS	3789678	3790667	.	-	0	ID=cds3508;Name=YP_002404655.1;Parent=gene3782;Note=catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme;Dbxref=Genbank:YP_002404655.1,GeneID:7147477;gbkey=CDS;product=DNA-directed RNA polymerase subunit alpha;protein_id=YP_002404655.1;transl_table=11
NC_011748.1	RefSeq	gene	3790693	3791313	.	-	.	ID=gene3783;Name=rpsD;Dbxref=GeneID:7147495;gbkey=Gene;gene=rpsD;locus_tag=EC55989_3713
NC_011748.1	RefSeq	CDS	3790693	3791313	.	-	0	ID=cds3509;Name=YP_002404656.1;Parent=gene3783;Note=primary rRNA binding protein%3B nucleates 30S assembly%3B involved in translational accuracy with proteins S5 and S12%3B interacts with protein S5%3B involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA%3B interacts with transcription complex and functions similar to protein NusA in antitermination;Dbxref=Genbank:YP_002404656.1,GeneID:7147495;gbkey=CDS;product=30S ribosomal protein S4;protein_id=YP_002404656.1;transl_table=11
NC_011748.1	RefSeq	gene	3791347	3791736	.	-	.	ID=gene3784;Name=rpsK;Dbxref=GeneID:7147508;gbkey=Gene;gene=rpsK;locus_tag=EC55989_3714
NC_011748.1	RefSeq	CDS	3791347	3791736	.	-	0	ID=cds3510;Name=YP_002404657.1;Parent=gene3784;Note=located on the platform of the 30S subunit%2C it bridges several disparate RNA helices of the 16S rRNA%3B forms part of the Shine-Dalgarno cleft in the 70S ribosome%3B interacts with S7 and S18 and IF-3;Dbxref=Genbank:YP_002404657.1,GeneID:7147508;gbkey=CDS;product=30S ribosomal protein S11;protein_id=YP_002404657.1;transl_table=11
NC_011748.1	RefSeq	gene	3791753	3792109	.	-	.	ID=gene3785;Name=rpsM;Dbxref=GeneID:7147515;gbkey=Gene;gene=rpsM;locus_tag=EC55989_3715
NC_011748.1	RefSeq	CDS	3791753	3792109	.	-	0	ID=cds3511;Name=YP_002404658.1;Parent=gene3785;Note=located at the top of the head of the 30S subunit%2C it contacts several helices of the 16S rRNA%3B makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5%3B contacts P-site tRNA;Dbxref=Genbank:YP_002404658.1,GeneID:7147515;gbkey=CDS;product=30S ribosomal protein S13;protein_id=YP_002404658.1;transl_table=11
NC_011748.1	RefSeq	gene	3792110	3792188	.	-	.	ID=gene3786;Name=EC55989_misc_RNA_85;Dbxref=GeneID:7147517;gbkey=Gene;locus_tag=EC55989_misc_RNA_85
NC_011748.1	RefSeq	transcript	3792110	3792188	.	-	.	ID=rna162;Parent=gene3786;Dbxref=GeneID:7147517;gbkey=misc_RNA;product=Alpha_RBS
NC_011748.1	RefSeq	exon	3792110	3792188	.	-	.	ID=id316;Parent=rna162;Dbxref=GeneID:7147517;gbkey=misc_RNA;product=Alpha_RBS
NC_011748.1	RefSeq	gene	3792404	3793735	.	-	.	ID=gene3787;Name=secY;Dbxref=GeneID:7145313;gbkey=Gene;gene=secY;locus_tag=EC55989_3716
NC_011748.1	RefSeq	CDS	3792404	3793735	.	-	0	ID=cds3512;Name=YP_002404659.1;Parent=gene3787;Note=forms heterotrimeric complex in the membrane%3B in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG%3B the SecG subunit is not essential%3B in bacteria translocation is driven via the SecA ATPase;Dbxref=Genbank:YP_002404659.1,GeneID:7145313;gbkey=CDS;product=preprotein translocase subunit SecY;protein_id=YP_002404659.1;transl_table=11
NC_011748.1	RefSeq	gene	3793743	3794177	.	-	.	ID=gene3788;Name=rplO;Dbxref=GeneID:7147627;gbkey=Gene;gene=rplO;locus_tag=EC55989_3717
NC_011748.1	RefSeq	CDS	3793743	3794177	.	-	0	ID=cds3513;Name=YP_002404660.1;Parent=gene3788;Note=late assembly protein;Dbxref=Genbank:YP_002404660.1,GeneID:7147627;gbkey=CDS;product=50S ribosomal protein L15;protein_id=YP_002404660.1;transl_table=11
NC_011748.1	RefSeq	gene	3794181	3794360	.	-	.	ID=gene3789;Name=rpmD;Dbxref=GeneID:7147475;gbkey=Gene;gene=rpmD;locus_tag=EC55989_3718
NC_011748.1	RefSeq	CDS	3794181	3794360	.	-	0	ID=cds3514;Name=YP_002404661.1;Parent=gene3789;Note=L30 binds domain II of the 23S rRNA and the 5S rRNA%3B similar to eukaryotic protein L7;Dbxref=Genbank:YP_002404661.1,GeneID:7147475;gbkey=CDS;product=50S ribosomal protein L30;protein_id=YP_002404661.1;transl_table=11
NC_011748.1	RefSeq	gene	3794364	3794867	.	-	.	ID=gene3790;Name=rpsE;Dbxref=GeneID:7147489;gbkey=Gene;gene=rpsE;locus_tag=EC55989_3719
NC_011748.1	RefSeq	CDS	3794364	3794867	.	-	0	ID=cds3515;Name=YP_002404662.1;Parent=gene3790;Note=located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body%3B contacts S4 and S8%3B with S4 and S12 plays a role in translational accuracy%3B mutations in this gene result in spectinomycin resistance;Dbxref=Genbank:YP_002404662.1,GeneID:7147489;gbkey=CDS;product=30S ribosomal protein S5;protein_id=YP_002404662.1;transl_table=11
NC_011748.1	RefSeq	gene	3794882	3795235	.	-	.	ID=gene3791;Name=rplR;Dbxref=GeneID:7147509;gbkey=Gene;gene=rplR;locus_tag=EC55989_3720
NC_011748.1	RefSeq	CDS	3794882	3795235	.	-	0	ID=cds3516;Name=YP_002404663.1;Parent=gene3791;Note=binds 5S rRNA along with protein L5 and L25;Dbxref=Genbank:YP_002404663.1,GeneID:7147509;gbkey=CDS;product=50S ribosomal protein L18;protein_id=YP_002404663.1;transl_table=11
NC_011748.1	RefSeq	gene	3795245	3795778	.	-	.	ID=gene3792;Name=rplF;Dbxref=GeneID:7147478;gbkey=Gene;gene=rplF;locus_tag=EC55989_3721
NC_011748.1	RefSeq	CDS	3795245	3795778	.	-	0	ID=cds3517;Name=YP_002404664.1;Parent=gene3792;Note=ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein%3B RNA-binding appears to be in the C-terminal domain%3B mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain%3B it has been localized to a region between the base of the L7%2FL12 stalk and the central protuberance;Dbxref=Genbank:YP_002404664.1,GeneID:7147478;gbkey=CDS;product=50S ribosomal protein L6;protein_id=YP_002404664.1;transl_table=11
NC_011748.1	RefSeq	gene	3795791	3796183	.	-	.	ID=gene3793;Name=rpsH;Dbxref=GeneID:7147468;gbkey=Gene;gene=rpsH;locus_tag=EC55989_3722
NC_011748.1	RefSeq	CDS	3795791	3796183	.	-	0	ID=cds3518;Name=YP_002404665.1;Parent=gene3793;Note=binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit;Dbxref=Genbank:YP_002404665.1,GeneID:7147468;gbkey=CDS;product=30S ribosomal protein S8;protein_id=YP_002404665.1;transl_table=11
NC_011748.1	RefSeq	gene	3796217	3796522	.	-	.	ID=gene3794;Name=rpsN;Dbxref=GeneID:7147512;gbkey=Gene;gene=rpsN;locus_tag=EC55989_3723
NC_011748.1	RefSeq	CDS	3796217	3796522	.	-	0	ID=cds3519;Name=YP_002404666.1;Parent=gene3794;Note=located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit%3B similar to what is observed with proteins L31 and L33%2C some proteins in this family contain CXXC motifs that are involved in zinc binding%3B if two copies are present in a genome%2C then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc%3B the proteins in this group do not appear to have the zinc-binding motif;Dbxref=Genbank:YP_002404666.1,GeneID:7147512;gbkey=CDS;product=30S ribosomal protein S14;protein_id=YP_002404666.1;transl_table=11
NC_011748.1	RefSeq	gene	3796537	3797076	.	-	.	ID=gene3795;Name=rplE;Dbxref=GeneID:7147518;gbkey=Gene;gene=rplE;locus_tag=EC55989_3724
NC_011748.1	RefSeq	CDS	3796537	3797076	.	-	0	ID=cds3520;Name=YP_002404667.1;Parent=gene3795;Note=part of 50S and 5S%2FL5%2FL18%2FL25 subcomplex%3B contacts 5S rRNA and P site tRNA%3B forms a bridge to the 30S subunit in the ribosome by binding to S13;Dbxref=Genbank:YP_002404667.1,GeneID:7147518;gbkey=CDS;product=50S ribosomal protein L5;protein_id=YP_002404667.1;transl_table=11
NC_011748.1	RefSeq	gene	3797091	3797405	.	-	.	ID=gene3796;Name=rplX;Dbxref=GeneID:7147467;gbkey=Gene;gene=rplX;locus_tag=EC55989_3725
NC_011748.1	RefSeq	CDS	3797091	3797405	.	-	0	ID=cds3521;Name=YP_002404668.1;Parent=gene3796;Note=assembly initiator protein%3B binds to 5%27 end of 23S rRNA and nucleates assembly of the 50S%3B surrounds polypeptide exit tunnel;Dbxref=Genbank:YP_002404668.1,GeneID:7147467;gbkey=CDS;product=50S ribosomal protein L24;protein_id=YP_002404668.1;transl_table=11
NC_011748.1	RefSeq	gene	3797416	3797787	.	-	.	ID=gene3797;Name=rplN;Dbxref=GeneID:7147484;gbkey=Gene;gene=rplN;locus_tag=EC55989_3726
NC_011748.1	RefSeq	CDS	3797416	3797787	.	-	0	ID=cds3522;Name=YP_002404669.1;Parent=gene3797;Note=binds to the 23S rRNA between the centers for peptidyl transferase and GTPase;Dbxref=Genbank:YP_002404669.1,GeneID:7147484;gbkey=CDS;product=50S ribosomal protein L14;protein_id=YP_002404669.1;transl_table=11
NC_011748.1	RefSeq	gene	3797952	3798206	.	-	.	ID=gene3798;Name=rpsQ;Dbxref=GeneID:7147474;gbkey=Gene;gene=rpsQ;locus_tag=EC55989_3727
NC_011748.1	RefSeq	CDS	3797952	3798206	.	-	0	ID=cds3523;Name=YP_002404670.1;Parent=gene3798;Note=primary binding protein%3B helps mediate assembly%3B involved in translation fidelity;Dbxref=Genbank:YP_002404670.1,GeneID:7147474;gbkey=CDS;product=30S ribosomal protein S17;protein_id=YP_002404670.1;transl_table=11
NC_011748.1	RefSeq	gene	3798206	3798397	.	-	.	ID=gene3799;Name=rpmC;Dbxref=GeneID:7147521;gbkey=Gene;gene=rpmC;locus_tag=EC55989_3728
NC_011748.1	RefSeq	CDS	3798206	3798397	.	-	0	ID=cds3524;Name=YP_002404671.1;Parent=gene3799;Note=one of the stabilizing components for the large ribosomal subunit;Dbxref=Genbank:YP_002404671.1,GeneID:7147521;gbkey=CDS;product=50S ribosomal protein L29;protein_id=YP_002404671.1;transl_table=11
NC_011748.1	RefSeq	gene	3798397	3798807	.	-	.	ID=gene3800;Name=rplP;Dbxref=GeneID:7147488;gbkey=Gene;gene=rplP;locus_tag=EC55989_3729
NC_011748.1	RefSeq	CDS	3798397	3798807	.	-	0	ID=cds3525;Name=YP_002404672.1;Parent=gene3800;Note=located in the peptidyl transferase center and may be involved in peptidyl transferase activity%3B similar to archaeal L10e;Dbxref=Genbank:YP_002404672.1,GeneID:7147488;gbkey=CDS;product=50S ribosomal protein L16;protein_id=YP_002404672.1;transl_table=11
NC_011748.1	RefSeq	gene	3798820	3799521	.	-	.	ID=gene3801;Name=rpsC;Dbxref=GeneID:7147476;gbkey=Gene;gene=rpsC;locus_tag=EC55989_3730
NC_011748.1	RefSeq	CDS	3798820	3799521	.	-	0	ID=cds3526;Name=YP_002404673.1;Parent=gene3801;Note=forms a complex with S10 and S14%3B binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation;Dbxref=Genbank:YP_002404673.1,GeneID:7147476;gbkey=CDS;product=30S ribosomal protein S3;protein_id=YP_002404673.1;transl_table=11
NC_011748.1	RefSeq	gene	3799539	3799871	.	-	.	ID=gene3802;Name=rplV;Dbxref=GeneID:7147507;gbkey=Gene;gene=rplV;locus_tag=EC55989_3731
NC_011748.1	RefSeq	CDS	3799539	3799871	.	-	0	ID=cds3527;Name=YP_002404674.1;Parent=gene3802;Note=binds specifically to 23S rRNA during the early stages of 50S assembly%3B makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome%3B mutations in this gene result in erythromycin resistance%3B located near peptidyl-transferase center;Dbxref=Genbank:YP_002404674.1,GeneID:7147507;gbkey=CDS;product=50S ribosomal protein L22;protein_id=YP_002404674.1;transl_table=11
NC_011748.1	RefSeq	gene	3799886	3800164	.	-	.	ID=gene3803;Name=rpsS;Dbxref=GeneID:7147482;gbkey=Gene;gene=rpsS;locus_tag=EC55989_3732
NC_011748.1	RefSeq	CDS	3799886	3800164	.	-	0	ID=cds3528;Name=YP_002404675.1;Parent=gene3803;Note=protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA;Dbxref=Genbank:YP_002404675.1,GeneID:7147482;gbkey=CDS;product=30S ribosomal protein S19;protein_id=YP_002404675.1;transl_table=11
NC_011748.1	RefSeq	gene	3800181	3801002	.	-	.	ID=gene3804;Name=rplB;Dbxref=GeneID:7147523;gbkey=Gene;gene=rplB;locus_tag=EC55989_3733
NC_011748.1	RefSeq	CDS	3800181	3801002	.	-	0	ID=cds3529;Name=YP_002404676.1;Parent=gene3804;Note=one of the primary rRNA-binding proteins%3B required for association of the 30S and 50S subunits to form the 70S ribosome%2C for tRNA binding and peptide bond formation;Dbxref=Genbank:YP_002404676.1,GeneID:7147523;gbkey=CDS;product=50S ribosomal protein L2;protein_id=YP_002404676.1;transl_table=11
NC_011748.1	RefSeq	gene	3801020	3801322	.	-	.	ID=gene3805;Name=rplW;Dbxref=GeneID:7147464;gbkey=Gene;gene=rplW;locus_tag=EC55989_3734
NC_011748.1	RefSeq	CDS	3801020	3801322	.	-	0	ID=cds3530;Name=YP_002404677.1;Parent=gene3805;Note=binds third domain of 23S rRNA and protein L29%3B part of exit tunnel;Dbxref=Genbank:YP_002404677.1,GeneID:7147464;gbkey=CDS;product=50S ribosomal protein L23;protein_id=YP_002404677.1;transl_table=11
NC_011748.1	RefSeq	gene	3801319	3801924	.	-	.	ID=gene3806;Name=rplD;Dbxref=GeneID:7147483;gbkey=Gene;gene=rplD;locus_tag=EC55989_3735
NC_011748.1	RefSeq	CDS	3801319	3801924	.	-	0	ID=cds3531;Name=YP_002404678.1;Parent=gene3806;Note=L4 is important during the early stages of 50S assembly%3B it initially binds near the 5%27 end of the 23S rRNA;Dbxref=Genbank:YP_002404678.1,GeneID:7147483;gbkey=CDS;product=50S ribosomal protein L4;protein_id=YP_002404678.1;transl_table=11
NC_011748.1	RefSeq	gene	3801935	3802564	.	-	.	ID=gene3807;Name=rplC;Dbxref=GeneID:7147466;gbkey=Gene;gene=rplC;locus_tag=EC55989_3736
NC_011748.1	RefSeq	CDS	3801935	3802564	.	-	0	ID=cds3532;Name=YP_002404679.1;Parent=gene3807;Note=binds directly near the 3%27 end of the 23S rRNA%2C where it nucleates assembly of the 50S subunit%3B essential for peptidyltransferase activity%3B mutations in this gene confer resistance to tiamulin;Dbxref=Genbank:YP_002404679.1,GeneID:7147466;gbkey=CDS;product=50S ribosomal protein L3;protein_id=YP_002404679.1;transl_table=11
NC_011748.1	RefSeq	gene	3802597	3802908	.	-	.	ID=gene3808;Name=rpsJ;Dbxref=GeneID:7147465;gbkey=Gene;gene=rpsJ;locus_tag=EC55989_3737
NC_011748.1	RefSeq	CDS	3802597	3802908	.	-	0	ID=cds3533;Name=YP_002404680.1;Parent=gene3808;Note=NusE%3B involved in assembly of the 30S subunit%3B in the ribosome%2C this protein is involved in the binding of tRNA%3B in Escherichia coli this protein was also found to be involved in transcription antitermination%3B NusB%2FS10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination%3B binding of NusB%2FS10 to boxA nucleates assembly of the antitermination complex;Dbxref=Genbank:YP_002404680.1,GeneID:7147465;gbkey=CDS;product=30S ribosomal protein S10;protein_id=YP_002404680.1;transl_table=11
NC_011748.1	RefSeq	gene	3803037	3803198	.	-	.	ID=gene3809;Name=EC55989_3738;Dbxref=GeneID:7147514;gbkey=Gene;locus_tag=EC55989_3738
NC_011748.1	RefSeq	CDS	3803037	3803198	.	-	0	ID=cds3534;Name=YP_002404681.1;Parent=gene3809;Note=Evidence 6 : Doubtful CDS;Dbxref=Genbank:YP_002404681.1,GeneID:7147514;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404681.1;transl_table=11
NC_011748.1	RefSeq	gene	3803287	3803754	.	+	.	ID=gene3810;Name=EC55989_3739;Dbxref=GeneID:7145009;gbkey=Gene;locus_tag=EC55989_3739
NC_011748.1	RefSeq	CDS	3803287	3803754	.	+	0	ID=cds3535;Name=YP_002404682.1;Parent=gene3810;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002404682.1,GeneID:7145009;gbkey=CDS;product=bifunctional prepilin peptidase HopD: leader peptidase%3B methyl transferase %28General Secretory Pathway%29;protein_id=YP_002404682.1;transl_table=11
NC_011748.1	RefSeq	gene	3803751	3804227	.	-	.	ID=gene3811;Name=bfr;Dbxref=GeneID:7145010;gbkey=Gene;gene=bfr;locus_tag=EC55989_3740
NC_011748.1	RefSeq	CDS	3803751	3804227	.	-	0	ID=cds3536;Name=YP_002404683.1;Parent=gene3811;Note=iron storage protein;Dbxref=Genbank:YP_002404683.1,GeneID:7145010;gbkey=CDS;product=bacterioferritin;protein_id=YP_002404683.1;transl_table=11
NC_011748.1	RefSeq	gene	3804300	3804494	.	-	.	ID=gene3812;Name=bfd;Dbxref=GeneID:7145615;gbkey=Gene;gene=bfd;locus_tag=EC55989_3741
NC_011748.1	RefSeq	CDS	3804300	3804494	.	-	0	ID=cds3537;Name=YP_002404684.1;Parent=gene3812;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 8954950%2C 9889981%2C 2661540%2C 8639572%3B Product type c : carrier;Dbxref=Genbank:YP_002404684.1,GeneID:7145615;gbkey=CDS;product=bacterioferritin-associated ferredoxin;protein_id=YP_002404684.1;transl_table=11
NC_011748.1	RefSeq	gene	3804677	3805861	.	-	.	ID=gene3813;Name=tufA;Dbxref=GeneID:7145614;gbkey=Gene;gene=tufA;locus_tag=EC55989_3742
NC_011748.1	RefSeq	CDS	3804677	3805861	.	-	0	ID=cds3538;Name=YP_002404685.1;Parent=gene3813;Note=EF-Tu%3B promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis%3B when the tRNA anticodon matches the mRNA codon%2C GTP hydrolysis results%3B the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts%3B many prokaryotes have two copies of the gene encoding EF-Tu;Dbxref=Genbank:YP_002404685.1,GeneID:7145614;gbkey=CDS;product=elongation factor Tu;protein_id=YP_002404685.1;transl_table=11
NC_011748.1	RefSeq	gene	3805932	3808046	.	-	.	ID=gene3814;Name=fusA;Dbxref=GeneID:7147872;gbkey=Gene;gene=fusA;locus_tag=EC55989_3743
NC_011748.1	RefSeq	CDS	3805932	3808046	.	-	0	ID=cds3539;Name=YP_002404686.1;Parent=gene3814;Note=EF-G%3B promotes GTP-dependent translocation of the ribosome during translation%3B many organisms have multiple copies of this gene;Dbxref=Genbank:YP_002404686.1,GeneID:7147872;gbkey=CDS;product=elongation factor G;protein_id=YP_002404686.1;transl_table=11
NC_011748.1	RefSeq	gene	3808143	3808613	.	-	.	ID=gene3815;Name=rpsG;Dbxref=GeneID:7146234;gbkey=Gene;gene=rpsG;locus_tag=EC55989_3744
NC_011748.1	RefSeq	CDS	3808143	3808613	.	-	0	ID=cds3540;Name=YP_002404687.1;Parent=gene3815;Note=binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit;Dbxref=Genbank:YP_002404687.1,GeneID:7146234;gbkey=CDS;product=30S ribosomal protein S7;protein_id=YP_002404687.1;transl_table=11
NC_011748.1	RefSeq	gene	3808710	3809084	.	-	.	ID=gene3816;Name=rpsL;Dbxref=GeneID:7147511;gbkey=Gene;gene=rpsL;locus_tag=EC55989_3745
NC_011748.1	RefSeq	CDS	3808710	3809084	.	-	0	ID=cds3541;Name=YP_002404688.1;Parent=gene3816;Note=interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone%3B located at the interface of the 30S and 50S subunits%2C it traverses the body of the 30S subunit contacting proteins on the other side%3B mutations in the S12 gene confer streptomycin resistance;Dbxref=Genbank:YP_002404688.1,GeneID:7147511;gbkey=CDS;product=30S ribosomal protein S12;protein_id=YP_002404688.1;transl_table=11
NC_011748.1	RefSeq	gene	3809210	3809497	.	-	.	ID=gene3817;Name=tusB;Dbxref=GeneID:7147516;gbkey=Gene;gene=tusB;locus_tag=EC55989_3746
NC_011748.1	RefSeq	CDS	3809210	3809497	.	-	0	ID=cds3542;Name=YP_002404689.1;Parent=gene3817;Note=in Escherichai coli the heterohexameric TusBCD complex is involved in sulfur related that results in thiouridation to U34 position in some tRNAs;Dbxref=Genbank:YP_002404689.1,GeneID:7147516;gbkey=CDS;product=sulfur transfer complex subunit TusB;protein_id=YP_002404689.1;transl_table=11
NC_011748.1	RefSeq	gene	3809505	3809864	.	-	.	ID=gene3818;Name=tusC;Dbxref=GeneID:7147876;gbkey=Gene;gene=tusC;locus_tag=EC55989_3747
NC_011748.1	RefSeq	CDS	3809505	3809864	.	-	0	ID=cds3543;Name=YP_002404690.1;Parent=gene3818;Note=in Escherichai coli the heterohexameric TusBCD complex is involved in sulfur related that results in thiouridation to U34 position in some tRNAs;Dbxref=Genbank:YP_002404690.1,GeneID:7147876;gbkey=CDS;product=sulfur relay protein TusC;protein_id=YP_002404690.1;transl_table=11
NC_011748.1	RefSeq	gene	3809864	3810250	.	-	.	ID=gene3819;Name=tusD;Dbxref=GeneID:7147877;gbkey=Gene;gene=tusD;locus_tag=EC55989_3748
NC_011748.1	RefSeq	CDS	3809864	3810250	.	-	0	ID=cds3544;Name=YP_002404691.1;Parent=gene3819;Note=in Escherichai coli the heterohexameric TusBCD complex is involved in sulfur related that results in thiouridation to U34 position in some tRNAs;Dbxref=Genbank:YP_002404691.1,GeneID:7147877;gbkey=CDS;product=sulfur transfer complex subunit TusD;protein_id=YP_002404691.1;transl_table=11
NC_011748.1	RefSeq	gene	3810250	3810972	.	-	.	ID=gene3820;Name=yheO;Dbxref=GeneID:7147878;gbkey=Gene;gene=yheO;locus_tag=EC55989_3749
NC_011748.1	RefSeq	CDS	3810250	3810972	.	-	0	ID=cds3545;Name=YP_002404692.1;Parent=gene3820;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pr :  regulator;Dbxref=Genbank:YP_002404692.1,GeneID:7147878;gbkey=CDS;product=DNA-binding transcriptional regulator;protein_id=YP_002404692.1;transl_table=11
NC_011748.1	RefSeq	gene	3811139	3811951	.	-	.	ID=gene3821;Name=fkpA;Dbxref=GeneID:7148955;gbkey=Gene;gene=fkpA;locus_tag=EC55989_3750
NC_011748.1	RefSeq	CDS	3811139	3811951	.	-	0	ID=cds3546;Name=YP_002404693.1;Parent=gene3821;Note=rotamase;Dbxref=Genbank:YP_002404693.1,GeneID:7148955;gbkey=CDS;product=FKBP-type peptidylprolyl isomerase;protein_id=YP_002404693.1;transl_table=11
NC_011748.1	RefSeq	gene	3812172	3812390	.	+	.	ID=gene3822;Name=slyX;Dbxref=GeneID:7146120;gbkey=Gene;gene=slyX;locus_tag=EC55989_3751
NC_011748.1	RefSeq	CDS	3812172	3812390	.	+	0	ID=cds3547;Name=YP_002404694.1;Parent=gene3822;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404694.1,GeneID:7146120;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404694.1;transl_table=11
NC_011748.1	RefSeq	gene	3812439	3813029	.	-	.	ID=gene3823;Name=slyD;Dbxref=GeneID:7147665;gbkey=Gene;gene=slyD;locus_tag=EC55989_3752
NC_011748.1	RefSeq	CDS	3812439	3813029	.	-	0	ID=cds3548;Name=YP_002404695.1;Parent=gene3823;Note=rotamase;Dbxref=Genbank:YP_002404695.1,GeneID:7147665;gbkey=CDS;product=FKBP-type peptidylprolyl isomerase;protein_id=YP_002404695.1;transl_table=11
NC_011748.1	RefSeq	gene	3813124	3813324	.	-	.	ID=gene3824;Name=yheV;Dbxref=GeneID:7147664;gbkey=Gene;gene=yheV;locus_tag=EC55989_3753
NC_011748.1	RefSeq	CDS	3813124	3813324	.	-	0	ID=cds3549;Name=YP_002404696.1;Parent=gene3824;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404696.1,GeneID:7147664;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404696.1;transl_table=11
NC_011748.1	RefSeq	gene	3813334	3815139	.	-	.	ID=gene3825;Name=kefB;Dbxref=GeneID:7148959;gbkey=Gene;gene=kefB;locus_tag=EC55989_3754
NC_011748.1	RefSeq	CDS	3813334	3815139	.	-	0	ID=cds3550;Name=YP_002404697.1;Parent=gene3825;Note=involved in potassium efflux;Dbxref=Genbank:YP_002404697.1,GeneID:7148959;gbkey=CDS;product=glutathione-regulated potassium-efflux system protein KefB;protein_id=YP_002404697.1;transl_table=11
NC_011748.1	RefSeq	gene	3815139	3815693	.	-	.	ID=gene3826;Name=kefG;Dbxref=GeneID:7146667;gbkey=Gene;gene=kefG;locus_tag=EC55989_3755
NC_011748.1	RefSeq	CDS	3815139	3815693	.	-	0	ID=cds3551;Name=YP_002404698.1;Parent=gene3826;Note=required for KefB activity;Dbxref=Genbank:YP_002404698.1,GeneID:7146667;gbkey=CDS;product=glutathione-regulated potassium-efflux system ancillary protein KefG;protein_id=YP_002404698.1;transl_table=11
NC_011748.1	RefSeq	gene	3815821	3817734	.	+	.	ID=gene3827;Name=yheS;Dbxref=GeneID:7146670;gbkey=Gene;gene=yheS;locus_tag=EC55989_3757
NC_011748.1	RefSeq	CDS	3815821	3817734	.	+	0	ID=cds3552;Name=YP_002404699.1;Parent=gene3827;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002404699.1,GeneID:7146670;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=YP_002404699.1;transl_table=11
NC_011748.1	RefSeq	gene	3817734	3818756	.	+	.	ID=gene3828;Name=yheT;Dbxref=GeneID:7148956;gbkey=Gene;gene=yheT;locus_tag=EC55989_3758
NC_011748.1	RefSeq	CDS	3817734	3818756	.	+	0	ID=cds3553;Name=YP_002404700.1;Parent=gene3828;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 9889164%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002404700.1,GeneID:7148956;gbkey=CDS;product=hydrolase;protein_id=YP_002404700.1;transl_table=11
NC_011748.1	RefSeq	gene	3818750	3818968	.	+	.	ID=gene3829;Name=yheU;Dbxref=GeneID:7148957;gbkey=Gene;gene=yheU;locus_tag=EC55989_3759
NC_011748.1	RefSeq	CDS	3818750	3818968	.	+	0	ID=cds3554;Name=YP_002404701.1;Parent=gene3829;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404701.1,GeneID:7148957;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404701.1;transl_table=11
NC_011748.1	RefSeq	gene	3819022	3819891	.	+	.	ID=gene3830;Name=prkB;Dbxref=GeneID:7148958;gbkey=Gene;gene=prkB;locus_tag=EC55989_3760
NC_011748.1	RefSeq	CDS	3819022	3819891	.	+	0	ID=cds3555;Name=YP_002404702.1;Parent=gene3830;Note=Evidence 2b : Function of strongly homologous gene%3B PubMedId : 2559876%3B Product type e : enzyme;Dbxref=Genbank:YP_002404702.1,GeneID:7148958;gbkey=CDS;product=phosphoribulokinase;protein_id=YP_002404702.1;transl_table=11
NC_011748.1	RefSeq	gene	3819946	3820350	.	-	.	ID=gene3831;Name=yhfA;Dbxref=GeneID:7147247;gbkey=Gene;gene=yhfA;locus_tag=EC55989_3761
NC_011748.1	RefSeq	CDS	3819946	3820350	.	-	0	ID=cds3556;Name=YP_002404703.1;Parent=gene3831;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404703.1,GeneID:7147247;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404703.1;transl_table=11
NC_011748.1	RefSeq	gene	3820365	3820484	.	-	.	ID=gene3832;Name=crpTic;Dbxref=GeneID:7148960;gbkey=Gene;gene=crpTic;locus_tag=EC55989_misc_RNA_86
NC_011748.1	RefSeq	transcript	3820365	3820484	.	-	.	ID=rna163;Parent=gene3832;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 1715982%3B Product type n : RNA;Dbxref=GeneID:7148960;gbkey=misc_RNA;product=CrpTic
NC_011748.1	RefSeq	exon	3820365	3820484	.	-	.	ID=id317;Parent=rna163;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 1715982%3B Product type n : RNA;Dbxref=GeneID:7148960;gbkey=misc_RNA;product=CrpTic
NC_011748.1	RefSeq	gene	3820430	3820645	.	+	.	ID=gene3833;Name=EC55989_3762;Dbxref=GeneID:7145761;gbkey=Gene;locus_tag=EC55989_3762
NC_011748.1	RefSeq	CDS	3820430	3820645	.	+	0	ID=cds3557;Name=YP_002404704.1;Parent=gene3833;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404704.1,GeneID:7145761;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404704.1;transl_table=11
NC_011748.1	RefSeq	gene	3820652	3821284	.	+	.	ID=gene3834;Name=crp;Dbxref=GeneID:7145011;gbkey=Gene;gene=crp;locus_tag=EC55989_3763
NC_011748.1	RefSeq	CDS	3820652	3821284	.	+	0	ID=cds3558;Name=YP_002404705.1;Parent=gene3834;Note=complexes with cyclic AMP and binds to specific DNA sites near the promoter to regulate the transcription of several catabolite-sensitive operons;Dbxref=Genbank:YP_002404705.1,GeneID:7145011;gbkey=CDS;product=cAMP-regulatory protein;protein_id=YP_002404705.1;transl_table=11
NC_011748.1	RefSeq	gene	3821323	3823425	.	+	.	ID=gene3835;Name=yhfK;Dbxref=GeneID:7145760;gbkey=Gene;gene=yhfK;locus_tag=EC55989_3764
NC_011748.1	RefSeq	CDS	3821323	3823425	.	+	0	ID=cds3559;Name=YP_002404706.1;Parent=gene3835;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002404706.1,GeneID:7145760;gbkey=CDS;product=inner membrane protein;protein_id=YP_002404706.1;transl_table=11
NC_011748.1	RefSeq	gene	3823492	3824712	.	-	.	ID=gene3836;Name=argD;Dbxref=GeneID:7148962;gbkey=Gene;gene=argD;locus_tag=EC55989_3765
NC_011748.1	RefSeq	CDS	3823492	3824712	.	-	0	ID=cds3560;Name=YP_002404707.1;Parent=gene3836;Note=DapATase%3B bifunctional enzyme that functions in arginine and lysine biosynthetic pathways%3B catalyzes the formation of N-acetyl-L-glutamate 5-semialdehyde from 2-oxoglutarate and N%282%29-acetyl-L-ornithine or N-succinyl-2-L-amino-6-oxoheptanedioate from 2-oxoglutarate and N-succinyl-L-2%2C6-diaminoheptanedioate;Dbxref=Genbank:YP_002404707.1,GeneID:7148962;gbkey=CDS;product=bifunctional N-succinyldiaminopimelate-aminotransferase%2Facetylornithine transaminase protein;protein_id=YP_002404707.1;transl_table=11
NC_011748.1	RefSeq	gene	3824798	3825361	.	-	.	ID=gene3837;Name=pabA;Dbxref=GeneID:7145527;gbkey=Gene;gene=pabA;locus_tag=EC55989_3766
NC_011748.1	RefSeq	CDS	3824798	3825361	.	-	0	ID=cds3561;Name=YP_002404708.1;Parent=gene3837;Note=aminodeoxychorismate synthase subunit PabA%3B with PabB catalyzes the formation of 4-amino-4-deoxychorismate from chorismate and glutamine in para-aminobenzoate synthesis%3B PabA provides the glutamine amidotransferase activity;Dbxref=Genbank:YP_002404708.1,GeneID:7145527;gbkey=CDS;product=para-aminobenzoate synthase component II;protein_id=YP_002404708.1;transl_table=11
NC_011748.1	RefSeq	gene	3825393	3825995	.	-	.	ID=gene3838;Name=fic;Dbxref=GeneID:7147106;gbkey=Gene;gene=fic;locus_tag=EC55989_3767
NC_011748.1	RefSeq	CDS	3825393	3825995	.	-	0	ID=cds3562;Name=YP_002404709.1;Parent=gene3838;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 92021789%2C 94095125%2C 2007139%2C 2403545%2C 2546924%2C 7549107%3B Product type cp : cell process;Dbxref=Genbank:YP_002404709.1,GeneID:7147106;gbkey=CDS;product=cell filamentation protein Fic;protein_id=YP_002404709.1;transl_table=11
NC_011748.1	RefSeq	gene	3825985	3826152	.	-	.	ID=gene3839;Name=yhfG;Dbxref=GeneID:7146107;gbkey=Gene;gene=yhfG;locus_tag=EC55989_3768
NC_011748.1	RefSeq	CDS	3825985	3826152	.	-	0	ID=cds3563;Name=YP_002404710.1;Parent=gene3839;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404710.1,GeneID:7146107;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404710.1;transl_table=11
NC_011748.1	RefSeq	gene	3826257	3826829	.	-	.	ID=gene3840;Name=ppiA;Dbxref=GeneID:7148961;gbkey=Gene;gene=ppiA;locus_tag=EC55989_3769
NC_011748.1	RefSeq	CDS	3826257	3826829	.	-	0	ID=cds3564;Name=YP_002404711.1;Parent=gene3840;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 90272647%2C 91175755%2C 1606970%2C 2001362%2C 2007139%2C 2190212%2C 2403545%2C 2546924%2C 8130188%2C 8180197%3B Product type e : enzyme;Dbxref=Genbank:YP_002404711.1,GeneID:7148961;gbkey=CDS;product=peptidyl-prolyl cis-trans isomerase A;protein_id=YP_002404711.1;transl_table=11
NC_011748.1	RefSeq	gene	3827100	3828281	.	+	.	ID=gene3841;Name=tsgA;Dbxref=GeneID:7147228;gbkey=Gene;gene=tsgA;locus_tag=EC55989_3770
NC_011748.1	RefSeq	CDS	3827100	3828281	.	+	0	ID=cds3565;Name=YP_002404712.1;Parent=gene3841;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 20509826%3B Product type pt :  transporter;Dbxref=Genbank:YP_002404712.1,GeneID:7147228;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404712.1;transl_table=11
NC_011748.1	RefSeq	gene	3828543	3831086	.	+	.	ID=gene3842;Name=nirB;Dbxref=GeneID:7147866;gbkey=Gene;gene=nirB;locus_tag=EC55989_3771
NC_011748.1	RefSeq	CDS	3828543	3831086	.	+	0	ID=cds3566;Name=YP_002404713.1;Parent=gene3842;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 93062014%2C 2200672%2C 2445993%2C 2543955%3B Product type e : enzyme;Dbxref=Genbank:YP_002404713.1,GeneID:7147866;gbkey=CDS;product=nitrite reductase%2C large subunit%2C NAD%28P%29 H-binding;protein_id=YP_002404713.1;transl_table=11
NC_011748.1	RefSeq	gene	3831083	3831409	.	+	.	ID=gene3843;Name=nirD;Dbxref=GeneID:7147003;gbkey=Gene;gene=nirD;locus_tag=EC55989_3772
NC_011748.1	RefSeq	CDS	3831083	3831409	.	+	0	ID=cds3567;Name=YP_002404714.1;Parent=gene3843;Note=involved in reducing nitrite to ammonium to detoxify nitrite accumulation in anaerobic nitrate-respiring cells and regenerate NAD%2B%3B bounds to NirB%2C the cytoplasmic subunit%2C whose expression is induced at high nitrate concentrations;Dbxref=Genbank:YP_002404714.1,GeneID:7147003;gbkey=CDS;product=nitrite reductase small subunit;protein_id=YP_002404714.1;transl_table=11
NC_011748.1	RefSeq	gene	3831536	3832342	.	+	.	ID=gene3844;Name=nirC;Dbxref=GeneID:7147005;gbkey=Gene;gene=nirC;locus_tag=EC55989_3773
NC_011748.1	RefSeq	CDS	3831536	3832342	.	+	0	ID=cds3568;Name=YP_002404715.1;Parent=gene3844;Note=member of the FNT family of formate and nitrite transporters;Dbxref=Genbank:YP_002404715.1,GeneID:7147005;gbkey=CDS;product=nitrite transporter NirC;protein_id=YP_002404715.1;transl_table=11
NC_011748.1	RefSeq	gene	3832361	3833734	.	+	.	ID=gene3845;Name=cysG;Dbxref=GeneID:7147004;gbkey=Gene;gene=cysG;locus_tag=EC55989_3774
NC_011748.1	RefSeq	CDS	3832361	3833734	.	+	0	ID=cds3569;Name=YP_002404716.1;Parent=gene3845;Note=multifunction enzyme consisting of uroporphyrin-III C-methyltransferase%2C precorrin-2 dehydrogenase and sirohydrochlorin ferrochelatase%3B catalyzes the methylation of uroporphyrinogen III to form precorrin-2%2C then catalyzes formation of sirohydrochlorin from precorrin-2 and finally catalyzed the formation of siroheme from sirohydrochlorin;Dbxref=Genbank:YP_002404716.1,GeneID:7147004;gbkey=CDS;product=siroheme synthase;protein_id=YP_002404716.1;transl_table=11
NC_011748.1	RefSeq	gene	3833981	3834148	.	+	.	ID=gene3846;Name=yhfL;Dbxref=GeneID:7145825;gbkey=Gene;gene=yhfL;locus_tag=EC55989_3775
NC_011748.1	RefSeq	CDS	3833981	3834148	.	+	0	ID=cds3570;Name=YP_002404717.1;Parent=gene3846;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404717.1,GeneID:7145825;gbkey=CDS;product=secreted peptide;protein_id=YP_002404717.1;transl_table=11
NC_011748.1	RefSeq	gene	3834443	3835780	.	+	.	ID=gene3847;Name=frlA;Dbxref=GeneID:7148963;gbkey=Gene;gene=frlA;locus_tag=EC55989_3776
NC_011748.1	RefSeq	CDS	3834443	3835780	.	+	0	ID=cds3571;Name=YP_002404718.1;Parent=gene3847;Note=inner membrane protein possibly involved in fructoselysine transport%3B member of the flr operon;Dbxref=Genbank:YP_002404718.1,GeneID:7148963;gbkey=CDS;product=fructoselysine transporter;protein_id=YP_002404718.1;transl_table=11
NC_011748.1	RefSeq	gene	3835801	3836823	.	+	.	ID=gene3848;Name=frlB;Dbxref=GeneID:7146184;gbkey=Gene;gene=frlB;locus_tag=EC55989_3777
NC_011748.1	RefSeq	CDS	3835801	3836823	.	+	0	ID=cds3572;Name=YP_002404719.1;Parent=gene3848;Note=catalyzes the conversion of fructoselysine 6-phosphate to glucose 6-phosphate and lysine;Dbxref=Genbank:YP_002404719.1,GeneID:7146184;gbkey=CDS;product=fructoselysine-6-P-deglycase;protein_id=YP_002404719.1;transl_table=11
NC_011748.1	RefSeq	gene	3836873	3837703	.	+	.	ID=gene3849;Name=frlC;Dbxref=GeneID:7146185;gbkey=Gene;gene=frlC;locus_tag=EC55989_3778
NC_011748.1	RefSeq	CDS	3836873	3837703	.	+	0	ID=cds3573;Name=YP_002404720.1;Parent=gene3849;Note=YhfOP%3B YhfP%3B YhfO%3B FrlC%3B catalyzes the interconversion of fructoselysine and psicoselysine;Dbxref=Genbank:YP_002404720.1,GeneID:7146185;gbkey=CDS;product=fructoselysine 3-epimerase;protein_id=YP_002404720.1;transl_table=11
NC_011748.1	RefSeq	gene	3837700	3838485	.	+	.	ID=gene3850;Name=frlD;Dbxref=GeneID:7146186;gbkey=Gene;gene=frlD;locus_tag=EC55989_3779
NC_011748.1	RefSeq	CDS	3837700	3838485	.	+	0	ID=cds3574;Name=YP_002404721.1;Parent=gene3850;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 12147680%3B Product type e : enzyme;Dbxref=Genbank:YP_002404721.1,GeneID:7146186;gbkey=CDS;product=fructoselysine 6-kinase;protein_id=YP_002404721.1;transl_table=11
NC_011748.1	RefSeq	gene	3838585	3839316	.	+	.	ID=gene3851;Name=frlR;Dbxref=GeneID:7146187;gbkey=Gene;gene=frlR;locus_tag=EC55989_3780
NC_011748.1	RefSeq	CDS	3838585	3839316	.	+	0	ID=cds3575;Name=YP_002404722.1;Parent=gene3851;Note=may act as a transcriptional regulator of a  fructoselysine-induced operon containing the yhfM%2C yhfN%2C yhfO%2C yhfP%2C yhfQ%2C and yhfR genes;Dbxref=Genbank:YP_002404722.1,GeneID:7146187;gbkey=CDS;product=DNA-binding transcriptional regulator FrlR;protein_id=YP_002404722.1;transl_table=11
NC_011748.1	RefSeq	gene	3839468	3840553	.	-	.	ID=gene3852;Name=yhfS;Dbxref=GeneID:7146188;gbkey=Gene;gene=yhfS;locus_tag=EC55989_3781
NC_011748.1	RefSeq	CDS	3839468	3840553	.	-	0	ID=cds3576;Name=YP_002404723.1;Parent=gene3852;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404723.1,GeneID:7146188;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404723.1;transl_table=11
NC_011748.1	RefSeq	gene	3840565	3841869	.	-	.	ID=gene3853;Name=yhfT;Dbxref=GeneID:7148964;gbkey=Gene;gene=yhfT;locus_tag=EC55989_3782
NC_011748.1	RefSeq	CDS	3840565	3841869	.	-	0	ID=cds3577;Name=YP_002404724.1;Parent=gene3853;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002404724.1,GeneID:7148964;gbkey=CDS;product=inner membrane protein;protein_id=YP_002404724.1;transl_table=11
NC_011748.1	RefSeq	gene	3841881	3842234	.	-	.	ID=gene3854;Name=yhfU;Dbxref=GeneID:7148965;gbkey=Gene;gene=yhfU;locus_tag=EC55989_3783
NC_011748.1	RefSeq	CDS	3841881	3842234	.	-	0	ID=cds3578;Name=YP_002404725.1;Parent=gene3854;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404725.1,GeneID:7148965;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404725.1;transl_table=11
NC_011748.1	RefSeq	gene	3842245	3843123	.	-	.	ID=gene3855;Name=php;Dbxref=GeneID:7148966;gbkey=Gene;gene=php;locus_tag=EC55989_3784
NC_011748.1	RefSeq	CDS	3842245	3843123	.	-	0	ID=cds3579;Name=YP_002404726.1;Parent=gene3855;Note=phosphotriesterase homology protein%3B PhP%3B YhfV%3B member of a family of proteins related to phosphotriesterase %28PTE%29;Dbxref=Genbank:YP_002404726.1,GeneID:7148966;gbkey=CDS;product=hydrolase;protein_id=YP_002404726.1;transl_table=11
NC_011748.1	RefSeq	gene	3843120	3844346	.	-	.	ID=gene3856;Name=yhfW;Dbxref=GeneID:7147187;gbkey=Gene;gene=yhfW;locus_tag=EC55989_3785
NC_011748.1	RefSeq	CDS	3843120	3844346	.	-	0	ID=cds3580;Name=YP_002404727.1;Parent=gene3856;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002404727.1,GeneID:7147187;gbkey=CDS;product=mutase;protein_id=YP_002404727.1;transl_table=11
NC_011748.1	RefSeq	gene	3844346	3845509	.	-	.	ID=gene3857;Name=yhfX;Dbxref=GeneID:7148967;gbkey=Gene;gene=yhfX;locus_tag=EC55989_3786
NC_011748.1	RefSeq	CDS	3844346	3845509	.	-	0	ID=cds3581;Name=YP_002404728.1;Parent=gene3857;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002404728.1,GeneID:7148967;gbkey=CDS;product=amino acid racemase;protein_id=YP_002404728.1;transl_table=11
NC_011748.1	RefSeq	gene	3845593	3845955	.	-	.	ID=gene3858;Name=yhfY;Dbxref=GeneID:7148968;gbkey=Gene;gene=yhfY;locus_tag=EC55989_3787
NC_011748.1	RefSeq	CDS	3845593	3845955	.	-	0	ID=cds3582;Name=YP_002404729.1;Parent=gene3858;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404729.1,GeneID:7148968;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404729.1;transl_table=11
NC_011748.1	RefSeq	gene	3845972	3846877	.	-	.	ID=gene3859;Name=yhfZ;Dbxref=GeneID:7148969;gbkey=Gene;gene=yhfZ;locus_tag=EC55989_3788
NC_011748.1	RefSeq	CDS	3845972	3846877	.	-	0	ID=cds3583;Name=YP_002404730.1;Parent=gene3859;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404730.1,GeneID:7148969;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404730.1;transl_table=11
NC_011748.1	RefSeq	gene	3847146	3848150	.	-	.	ID=gene3860;Name=trpS;Dbxref=GeneID:7148970;gbkey=Gene;gene=trpS;locus_tag=EC55989_3789
NC_011748.1	RefSeq	CDS	3847146	3848150	.	-	0	ID=cds3584;Name=YP_002404731.1;Parent=gene3860;Note=catalyzes a two-step reaction%2C first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA;Dbxref=Genbank:YP_002404731.1,GeneID:7148970;gbkey=CDS;product=tryptophanyl-tRNA synthetase;protein_id=YP_002404731.1;transl_table=11
NC_011748.1	RefSeq	gene	3848143	3848901	.	-	.	ID=gene3861;Name=gph;Dbxref=GeneID:7147857;gbkey=Gene;gene=gph;locus_tag=EC55989_3790
NC_011748.1	RefSeq	CDS	3848143	3848901	.	-	0	ID=cds3585;Name=YP_002404732.1;Parent=gene3861;Note=catalyzes the dephosphorylation of 2-phosphoglycolate to form glycolate and phosphate;Dbxref=Genbank:YP_002404732.1,GeneID:7147857;gbkey=CDS;product=phosphoglycolate phosphatase;protein_id=YP_002404732.1;transl_table=11
NC_011748.1	RefSeq	gene	3848894	3849571	.	-	.	ID=gene3862;Name=rpe;Dbxref=GeneID:7146359;gbkey=Gene;gene=rpe;locus_tag=EC55989_3791
NC_011748.1	RefSeq	CDS	3848894	3849571	.	-	0	ID=cds3586;Name=YP_002404733.1;Parent=gene3862;Note=catalyzes the interconversion of D-ribulose 5-phosphate to xylulose 5-phosphate;Dbxref=Genbank:YP_002404733.1,GeneID:7146359;gbkey=CDS;product=ribulose-phosphate 3-epimerase;protein_id=YP_002404733.1;transl_table=11
NC_011748.1	RefSeq	gene	3849589	3850425	.	-	.	ID=gene3863;Name=dam;Dbxref=GeneID:7147460;gbkey=Gene;gene=dam;locus_tag=EC55989_3792
NC_011748.1	RefSeq	CDS	3849589	3850425	.	-	0	ID=cds3587;Name=YP_002404734.1;Parent=gene3863;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 90136529%2C 92262475%2C 92272672%2C 2549371%2C 6300769%2C 7603433%2C 8341592%3B Product type e : enzyme;Dbxref=Genbank:YP_002404734.1,GeneID:7147460;gbkey=CDS;product=DNA adenine methylase;protein_id=YP_002404734.1;transl_table=11
NC_011748.1	RefSeq	gene	3850532	3851818	.	-	.	ID=gene3864;Name=damX;Dbxref=GeneID:7145847;gbkey=Gene;gene=damX;locus_tag=EC55989_3793
NC_011748.1	RefSeq	CDS	3850532	3851818	.	-	0	ID=cds3588;Name=YP_002404735.1;Parent=gene3864;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404735.1,GeneID:7145847;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404735.1;transl_table=11
NC_011748.1	RefSeq	gene	3851910	3852998	.	-	.	ID=gene3865;Name=aroB;Dbxref=GeneID:7145848;gbkey=Gene;gene=aroB;locus_tag=EC55989_3794
NC_011748.1	RefSeq	CDS	3851910	3852998	.	-	0	ID=cds3589;Name=YP_002404736.1;Parent=gene3865;Note=catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate%3B functions in aromatic amino acid biosynthesis;Dbxref=Genbank:YP_002404736.1,GeneID:7145848;gbkey=CDS;product=3-dehydroquinate synthase;protein_id=YP_002404736.1;transl_table=11
NC_011748.1	RefSeq	gene	3853055	3853576	.	-	.	ID=gene3866;Name=aroK;Dbxref=GeneID:7145540;gbkey=Gene;gene=aroK;locus_tag=EC55989_3795
NC_011748.1	RefSeq	CDS	3853055	3853576	.	-	0	ID=cds3590;Name=YP_002404737.1;Parent=gene3866;Note=type I enzyme similar to type II but differentially regulated%3B major shikimate kinase in fully repressed cells%3B catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis;Dbxref=Genbank:YP_002404737.1,GeneID:7145540;gbkey=CDS;product=shikimate kinase I;protein_id=YP_002404737.1;transl_table=11
NC_011748.1	RefSeq	gene	3853977	3855215	.	-	.	ID=gene3867;Name=hofQ;Dbxref=GeneID:7145547;gbkey=Gene;gene=hofQ;locus_tag=EC55989_3796
NC_011748.1	RefSeq	CDS	3853977	3855215	.	-	0	ID=cds3591;Name=YP_002404738.1;Parent=gene3867;Note=outer membrane porin probably involved in uptake of extracellular double-stranded DNA%3B similar to outer membrane competence protein ComE from Haemophilus influenzae and outer membrane protein PilQ involved in type IV pilus production from Pseudomonas aeruginosa;Dbxref=Genbank:YP_002404738.1,GeneID:7145547;gbkey=CDS;product=outer membrane porin HofQ;protein_id=YP_002404738.1;transl_table=11
NC_011748.1	RefSeq	gene	3855127	3855531	.	-	.	ID=gene3868;Name=yrfA;Dbxref=GeneID:7146451;gbkey=Gene;gene=yrfA;locus_tag=EC55989_3797
NC_011748.1	RefSeq	CDS	3855127	3855531	.	-	0	ID=cds3592;Name=YP_002404739.1;Parent=gene3868;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404739.1,GeneID:7146451;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404739.1;transl_table=11
NC_011748.1	RefSeq	gene	3855521	3855961	.	-	.	ID=gene3869;Name=yrfB;Dbxref=GeneID:7149459;gbkey=Gene;gene=yrfB;locus_tag=EC55989_3798
NC_011748.1	RefSeq	CDS	3855521	3855961	.	-	0	ID=cds3593;Name=YP_002404740.1;Parent=gene3869;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002404740.1,GeneID:7149459;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404740.1;transl_table=11
NC_011748.1	RefSeq	gene	3855945	3856484	.	-	.	ID=gene3870;Name=yrfC;Dbxref=GeneID:7149460;gbkey=Gene;gene=yrfC;locus_tag=EC55989_3799
NC_011748.1	RefSeq	CDS	3855945	3856484	.	-	0	ID=cds3594;Name=YP_002404741.1;Parent=gene3870;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type ps :  structure;Dbxref=Genbank:YP_002404741.1,GeneID:7149460;gbkey=CDS;product=fimbrial assembly protein %28pilN-like%29;protein_id=YP_002404741.1;transl_table=11
NC_011748.1	RefSeq	gene	3856484	3857263	.	-	.	ID=gene3871;Name=yrfD;Dbxref=GeneID:7149461;gbkey=Gene;gene=yrfD;locus_tag=EC55989_3800
NC_011748.1	RefSeq	CDS	3856484	3857263	.	-	0	ID=cds3595;Name=YP_002404742.1;Parent=gene3871;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pf :  factor;Dbxref=Genbank:YP_002404742.1,GeneID:7149461;gbkey=CDS;product=pilus assembly protein;protein_id=YP_002404742.1;transl_table=11
NC_011748.1	RefSeq	gene	3857383	3859935	.	+	.	ID=gene3872;Name=mrcA;Dbxref=GeneID:7149462;gbkey=Gene;gene=mrcA;locus_tag=EC55989_3801
NC_011748.1	RefSeq	CDS	3857383	3859935	.	+	0	ID=cds3596;Name=YP_002404743.1;Parent=gene3872;Note=bifunctional murein transglycosylase%2Fmurein transpeptidase%3B penicillin-binding protein 1A%3B involved in the synthesis of cross-linked peptidoglycan from the lipid intermediates in cell wall formation%3B penicillin-insensitive transglycosylase catalyzes the formation of linear glycan strands and the penicillin-sensitive transpeptidase catalyzes the cross-linking of the peptide subunits;Dbxref=Genbank:YP_002404743.1,GeneID:7149462;gbkey=CDS;product=peptidoglycan synthetase;protein_id=YP_002404743.1;transl_table=11
NC_011748.1	RefSeq	gene	3860103	3860663	.	-	.	ID=gene3873;Name=nudE;Dbxref=GeneID:7146898;gbkey=Gene;gene=nudE;locus_tag=EC55989_3802
NC_011748.1	RefSeq	CDS	3860103	3860663	.	-	0	ID=cds3597;Name=YP_002404744.1;Parent=gene3873;Note=ADP-sugar pyrophosphatase%3B catalyzes the formation of D-ribose 5-phosphate from ADP-ribose%3B can also act on ADP-mannose and ADP-glucose;Dbxref=Genbank:YP_002404744.1,GeneID:7146898;gbkey=CDS;product=ADP-ribose diphosphatase NudE;protein_id=YP_002404744.1;transl_table=11
NC_011748.1	RefSeq	gene	3860983	3863118	.	+	.	ID=gene3874;Name=igaA;Dbxref=GeneID:7147039;gbkey=Gene;gene=igaA;locus_tag=EC55989_3803
NC_011748.1	RefSeq	CDS	3860983	3863118	.	+	0	ID=cds3598;Name=YP_002404745.1;Parent=gene3874;Note=Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism%3B PubMedId : 11553591%3B Product type r : regulator;Dbxref=Genbank:YP_002404745.1,GeneID:7147039;gbkey=CDS;product=intracellular growth attenuator protein;protein_id=YP_002404745.1;transl_table=11
NC_011748.1	RefSeq	gene	3863183	3863851	.	+	.	ID=gene3875;Name=yrfG;Dbxref=GeneID:7146545;gbkey=Gene;gene=yrfG;locus_tag=EC55989_3804
NC_011748.1	RefSeq	CDS	3863183	3863851	.	+	0	ID=cds3599;Name=YP_002404746.1;Parent=gene3875;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002404746.1,GeneID:7146545;gbkey=CDS;product=hydrolase;protein_id=YP_002404746.1;transl_table=11
NC_011748.1	RefSeq	gene	3863862	3864263	.	+	.	ID=gene3876;Name=hslR;Dbxref=GeneID:7149463;gbkey=Gene;gene=hslR;locus_tag=EC55989_3805
NC_011748.1	RefSeq	CDS	3863862	3864263	.	+	0	ID=cds3600;Name=YP_002404747.1;Parent=gene3876;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 9867837%2C 10675343%2C 10675344%3B Product type f : factor;Dbxref=Genbank:YP_002404747.1,GeneID:7149463;gbkey=CDS;product=ribosome-associated heat shock protein Hsp15;protein_id=YP_002404747.1;transl_table=11
NC_011748.1	RefSeq	gene	3864288	3865166	.	+	.	ID=gene3877;Name=hslO;Dbxref=GeneID:7146469;gbkey=Gene;gene=hslO;locus_tag=EC55989_3806
NC_011748.1	RefSeq	CDS	3864288	3865166	.	+	0	ID=cds3601;Name=YP_002404748.1;Parent=gene3877;Note=becomes active under oxidative stress%3B four conserved cysteines bind a zinc atom when they are in the reduced state and the enzyme is inactive%3B oxidative stress results in oxidized cysteines%2C release of zinc%2C and binding of Hsp33 to aggregation-prone proteins%3B forms dimers and higher order oligomers;Dbxref=Genbank:YP_002404748.1,GeneID:7146469;gbkey=CDS;product=Hsp33-like chaperonin;protein_id=YP_002404748.1;transl_table=11
NC_011748.1	RefSeq	gene	3865301	3867025	.	-	.	ID=gene3878;Name=yhgE;Dbxref=GeneID:7146468;gbkey=Gene;gene=yhgE;locus_tag=EC55989_3807
NC_011748.1	RefSeq	CDS	3865301	3867025	.	-	0	ID=cds3602;Name=YP_002404749.1;Parent=gene3878;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 20223645%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002404749.1,GeneID:7146468;gbkey=CDS;product=inner membrane protein;protein_id=YP_002404749.1;transl_table=11
NC_011748.1	RefSeq	gene	3867101	3867232	.	-	.	ID=gene3879;Name=EC55989_3808;Dbxref=GeneID:7148972;gbkey=Gene;locus_tag=EC55989_3808
NC_011748.1	RefSeq	CDS	3867101	3867232	.	-	0	ID=cds3603;Name=YP_002404750.1;Parent=gene3879;Note=Evidence 6 : Doubtful CDS;Dbxref=Genbank:YP_002404750.1,GeneID:7148972;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404750.1;transl_table=11
NC_011748.1	RefSeq	gene	3867404	3869026	.	+	.	ID=gene3880;Name=pck;Dbxref=GeneID:7145012;gbkey=Gene;gene=pck;locus_tag=EC55989_3809
NC_011748.1	RefSeq	CDS	3867404	3869026	.	+	0	ID=cds3604;Name=YP_002404751.1;Parent=gene3880;Note=PEP carboxykinase%3B PEP carboxylase%3B PEPCK%3B catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP;Dbxref=Genbank:YP_002404751.1,GeneID:7145012;gbkey=CDS;product=phosphoenolpyruvate carboxykinase;protein_id=YP_002404751.1;transl_table=11
NC_011748.1	RefSeq	gene	3869143	3869460	.	+	.	ID=gene3881;Name=EC55989_3810;Dbxref=GeneID:7147120;gbkey=Gene;locus_tag=EC55989_3810
NC_011748.1	RefSeq	CDS	3869143	3869460	.	+	0	ID=cds3605;Name=YP_002404752.1;Parent=gene3881;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404752.1,GeneID:7147120;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404752.1;transl_table=11
NC_011748.1	RefSeq	gene	3869519	3869815	.	+	.	ID=gene3882;Name=EC55989_3811;Dbxref=GeneID:7145013;gbkey=Gene;locus_tag=EC55989_3811
NC_011748.1	RefSeq	CDS	3869519	3869815	.	+	0	ID=cds3606;Name=YP_002404753.1;Parent=gene3882;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 2404279%3B Product type pr :  regulator;Dbxref=Genbank:YP_002404753.1,GeneID:7145013;gbkey=CDS;product=HTH-type transcriptional regulator yiaG;protein_id=YP_002404753.1;transl_table=11
NC_011748.1	RefSeq	gene	3869845	3871197	.	-	.	ID=gene3883;Name=envZ;Dbxref=GeneID:7145014;gbkey=Gene;gene=envZ;locus_tag=EC55989_3812
NC_011748.1	RefSeq	CDS	3869845	3871197	.	-	0	ID=cds3607;Name=YP_002404754.1;Parent=gene3883;Note=membrane-localized osmosensor%3B histidine kinase%3B in high osmolarity EnvZ autophosphorylates itself and transfers phosphoryl group to OmpR;Dbxref=Genbank:YP_002404754.1,GeneID:7145014;gbkey=CDS;product=osmolarity sensor protein;protein_id=YP_002404754.1;transl_table=11
NC_011748.1	RefSeq	gene	3871194	3871913	.	-	.	ID=gene3884;Name=ompR;Dbxref=GeneID:7146008;gbkey=Gene;gene=ompR;locus_tag=EC55989_3813
NC_011748.1	RefSeq	CDS	3871194	3871913	.	-	0	ID=cds3608;Name=YP_002404755.1;Parent=gene3884;Note=part of two-component system EnvZ%2FOmpR%3B regulates transcription of outer membrane porin genes ompC%2FF%3B under high osmolarity EnvZ functions as kinase%2Fphosphotransferase and phosphorylates OmpR%3B the result is increased expression of ompC and repression of ompF%3B also functions in regulation of other genes%3B forms dimers upon phosphorylation;Dbxref=Genbank:YP_002404755.1,GeneID:7146008;gbkey=CDS;product=osmolarity response regulator;protein_id=YP_002404755.1;transl_table=11
NC_011748.1	RefSeq	gene	3872141	3872617	.	+	.	ID=gene3885;Name=greB;Dbxref=GeneID:7147070;gbkey=Gene;gene=greB;locus_tag=EC55989_3814
NC_011748.1	RefSeq	CDS	3872141	3872617	.	+	0	ID=cds3609;Name=YP_002404756.1;Parent=gene3885;Note=necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites%3B arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through%2C resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3%27terminus;Dbxref=Genbank:YP_002404756.1,GeneID:7147070;gbkey=CDS;product=transcription elongation factor GreB;protein_id=YP_002404756.1;transl_table=11
NC_011748.1	RefSeq	gene	3872714	3875035	.	+	.	ID=gene3886;Name=yhgF;Dbxref=GeneID:7146366;gbkey=Gene;gene=yhgF;locus_tag=EC55989_3815
NC_011748.1	RefSeq	CDS	3872714	3875035	.	+	0	ID=cds3610;Name=YP_002404757.1;Parent=gene3886;Note=Evidence 2b : Function of strongly homologous gene%3B PubMedId : 8755871%3B Product type f : factor;Dbxref=Genbank:YP_002404757.1,GeneID:7146366;gbkey=CDS;product=transcriptional accessory protein;protein_id=YP_002404757.1;transl_table=11
NC_011748.1	RefSeq	gene	3875473	3875700	.	+	.	ID=gene3887;Name=feoA;Dbxref=GeneID:7148973;gbkey=Gene;gene=feoA;locus_tag=EC55989_3816
NC_011748.1	RefSeq	CDS	3875473	3875700	.	+	0	ID=cds3611;Name=YP_002404758.1;Parent=gene3887;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 94012482%2C 8407793%3B Product type t : transporter;Dbxref=Genbank:YP_002404758.1,GeneID:7148973;gbkey=CDS;product=ferrous iron transport protein A;protein_id=YP_002404758.1;transl_table=11
NC_011748.1	RefSeq	gene	3875717	3878038	.	+	.	ID=gene3888;Name=feoB;Dbxref=GeneID:7146086;gbkey=Gene;gene=feoB;locus_tag=EC55989_3817
NC_011748.1	RefSeq	CDS	3875717	3878038	.	+	0	ID=cds3612;Name=YP_002404759.1;Parent=gene3888;Note=cytoplasmic membrane ferrous uptake system permease%3B mutations disrupt the ability of Escherichia coli to take up ferrous iron%3B GTP-binding protein which requires GTP for efficient iron%28II%29 uptake;Dbxref=Genbank:YP_002404759.1,GeneID:7146086;gbkey=CDS;product=ferrous iron transport protein B;protein_id=YP_002404759.1;transl_table=11
NC_011748.1	RefSeq	gene	3878038	3878274	.	+	.	ID=gene3889;Name=yhgG;Dbxref=GeneID:7146087;gbkey=Gene;gene=yhgG;locus_tag=EC55989_3818
NC_011748.1	RefSeq	CDS	3878038	3878274	.	+	0	ID=cds3613;Name=YP_002404760.1;Parent=gene3889;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pr :  regulator;Dbxref=Genbank:YP_002404760.1,GeneID:7146087;gbkey=CDS;product=DNA-binding transcriptional regulator;protein_id=YP_002404760.1;transl_table=11
NC_011748.1	RefSeq	gene	3878477	3879355	.	+	.	ID=gene3890;Name=yhgA;Dbxref=GeneID:7148974;gbkey=Gene;gene=yhgA;locus_tag=EC55989_3819
NC_011748.1	RefSeq	CDS	3878477	3879355	.	+	0	ID=cds3614;Name=YP_002404761.1;Parent=gene3890;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 2678009%3B Product type ph : phenotype;Dbxref=Genbank:YP_002404761.1,GeneID:7148974;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404761.1;transl_table=11
NC_011748.1	RefSeq	gene	3879384	3880154	.	-	.	ID=gene3891;Name=bioH;Dbxref=GeneID:7148971;gbkey=Gene;gene=bioH;locus_tag=EC55989_3820
NC_011748.1	RefSeq	CDS	3879384	3880154	.	-	0	ID=cds3615;Name=YP_002404762.1;Parent=gene3891;Note=Shows carboxylesterase activity with a preference for short chain fatty acid esters%3B involved in pimeloyl-CoA synthesis;Dbxref=Genbank:YP_002404762.1,GeneID:7148971;gbkey=CDS;product=carboxylesterase BioH;protein_id=YP_002404762.1;transl_table=11
NC_011748.1	RefSeq	gene	3880192	3880875	.	+	.	ID=gene3892;Name=gntX;Dbxref=GeneID:7145629;gbkey=Gene;gene=gntX;locus_tag=EC55989_3821
NC_011748.1	RefSeq	CDS	3880192	3880875	.	+	0	ID=cds3616;Name=YP_002404763.1;Parent=gene3892;Note=involved in high-affinity gluconate transport;Dbxref=Genbank:YP_002404763.1,GeneID:7145629;gbkey=CDS;product=gluconate periplasmic binding protein;protein_id=YP_002404763.1;transl_table=11
NC_011748.1	RefSeq	gene	3880934	3881509	.	+	.	ID=gene3893;Name=gntY;Dbxref=GeneID:7146354;gbkey=Gene;gene=gntY;locus_tag=EC55989_3822
NC_011748.1	RefSeq	CDS	3880934	3881509	.	+	0	ID=cds3617;Name=YP_002404764.1;Parent=gene3893;Note=cytoplasmic protein that may be involved in the utilization of double-stranded DNA as a carbon source;Dbxref=Genbank:YP_002404764.1,GeneID:7146354;gbkey=CDS;product=DNA uptake protein;protein_id=YP_002404764.1;transl_table=11
NC_011748.1	RefSeq	gene	3881870	3883186	.	+	.	ID=gene3894;Name=gntT;Dbxref=GeneID:7146355;gbkey=Gene;gene=gntT;locus_tag=EC55989_3823
NC_011748.1	RefSeq	CDS	3881870	3883186	.	+	0	ID=cds3618;Name=YP_002404765.1;Parent=gene3894;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 172599%2C 4574689%2C 4582156%2C 93139975%2C 97141270%2C 98019089%2C 2845225%2C 3040894%2C 7984428%2C 9045817%3B Product type t : transporter;Dbxref=Genbank:YP_002404765.1,GeneID:7146355;gbkey=CDS;product=gluconate transporter%2C high-affinity GNT I system;protein_id=YP_002404765.1;transl_table=11
NC_011748.1	RefSeq	gene	3883231	3885315	.	-	.	ID=gene3895;Name=malQ;Dbxref=GeneID:7146352;gbkey=Gene;gene=malQ;locus_tag=EC55989_3824
NC_011748.1	RefSeq	CDS	3883231	3885315	.	-	0	ID=cds3619;Name=YP_002404766.1;Parent=gene3895;Note=amylomaltase%3B acts to release glucose from maltodextrins;Dbxref=Genbank:YP_002404766.1,GeneID:7146352;gbkey=CDS;product=4-alpha-glucanotransferase;protein_id=YP_002404766.1;transl_table=11
NC_011748.1	RefSeq	gene	3885325	3887718	.	-	.	ID=gene3896;Name=malP;Dbxref=GeneID:7146775;gbkey=Gene;gene=malP;locus_tag=EC55989_3825
NC_011748.1	RefSeq	CDS	3885325	3887718	.	-	0	ID=cds3620;Name=YP_002404767.1;Parent=gene3896;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 89033892%2C 10220320%2C 10469642%2C 2845225%2C 3037809%2C 3155826%2C 6283313%2C 6339728%2C 6986282%2C 9009262%3B Product type e : enzyme;Dbxref=Genbank:YP_002404767.1,GeneID:7146775;gbkey=CDS;product=maltodextrin phosphorylase;protein_id=YP_002404767.1;transl_table=11
NC_011748.1	RefSeq	gene	3888330	3891035	.	+	.	ID=gene3897;Name=malT;Dbxref=GeneID:7146774;gbkey=Gene;gene=malT;locus_tag=EC55989_3826
NC_011748.1	RefSeq	CDS	3888330	3891035	.	+	0	ID=cds3621;Name=YP_002404768.1;Parent=gene3897;Note=Positively regulates the transcription of the maltose regulon whose gene products are responsible for uptake and catabolism of malto-oligosaccharides;Dbxref=Genbank:YP_002404768.1,GeneID:7146774;gbkey=CDS;product=transcriptional regulator MalT;protein_id=YP_002404768.1;transl_table=11
NC_011748.1	RefSeq	gene	3891078	3892094	.	-	.	ID=gene3898;Name=rtcA;Dbxref=GeneID:7146777;gbkey=Gene;gene=rtcA;locus_tag=EC55989_3827
NC_011748.1	RefSeq	CDS	3891078	3892094	.	-	0	ID=cds3622;Name=YP_002404769.1;Parent=gene3898;Note=catalyzes the conversion of terminal3%27-phosphate of RNA to the 2%27%2C3%27-cyclicphosphodiester;Dbxref=Genbank:YP_002404769.1,GeneID:7146777;gbkey=CDS;product=RNA 3%27-terminal-phosphate cyclase;protein_id=YP_002404769.1;transl_table=11
NC_011748.1	RefSeq	gene	3892098	3893324	.	-	.	ID=gene3899;Name=rtcB;Dbxref=GeneID:7147552;gbkey=Gene;gene=rtcB;locus_tag=EC55989_3828
NC_011748.1	RefSeq	CDS	3892098	3893324	.	-	0	ID=cds3623;Name=YP_002404770.1;Parent=gene3899;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 9738023;Dbxref=Genbank:YP_002404770.1,GeneID:7147552;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404770.1;transl_table=11
NC_011748.1	RefSeq	gene	3893513	3895111	.	+	.	ID=gene3900;Name=rtcR;Dbxref=GeneID:7147553;gbkey=Gene;gene=rtcR;locus_tag=EC55989_3829
NC_011748.1	RefSeq	CDS	3893513	3895111	.	+	0	ID=cds3624;Name=YP_002404771.1;Parent=gene3900;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 9738023%2C 3045764%2C 7920643%2C 7984428%3B Product type r : regulator;Dbxref=Genbank:YP_002404771.1,GeneID:7147553;gbkey=CDS;product=sigma 54-dependent transcriptional regulator of rtcBA expression;protein_id=YP_002404771.1;transl_table=11
NC_011748.1	RefSeq	gene	3895093	3895851	.	-	.	ID=gene3901;Name=glpR;Dbxref=GeneID:7147554;gbkey=Gene;gene=glpR;locus_tag=EC55989_3830
NC_011748.1	RefSeq	CDS	3895093	3895851	.	-	0	ID=cds3625;Name=YP_002404772.1;Parent=gene3901;Note=represses the glpD%2C glpFK%2C glpTQ%2C and glpACB operons involved in glycerol-3-phosphate metabolism;Dbxref=Genbank:YP_002404772.1,GeneID:7147554;gbkey=CDS;product=DNA-binding transcriptional repressor GlpR;protein_id=YP_002404772.1;transl_table=11
NC_011748.1	RefSeq	gene	3895868	3896698	.	-	.	ID=gene3902;Name=glpG;Dbxref=GeneID:7146324;gbkey=Gene;gene=glpG;locus_tag=EC55989_3831
NC_011748.1	RefSeq	CDS	3895868	3896698	.	-	0	ID=cds3626;Name=YP_002404773.1;Parent=gene3902;Note=protease responsible for the cleavage between Ser and Asp residues of proteins in regions of high local hydrophilicity;Dbxref=Genbank:YP_002404773.1,GeneID:7146324;gbkey=CDS;product=intramembrane serine protease GlpG;protein_id=YP_002404773.1;transl_table=11
NC_011748.1	RefSeq	gene	3896743	3897069	.	-	.	ID=gene3903;Name=glpE;Dbxref=GeneID:7146321;gbkey=Gene;gene=glpE;locus_tag=EC55989_3832
NC_011748.1	RefSeq	CDS	3896743	3897069	.	-	0	ID=cds3627;Name=YP_002404774.1;Parent=gene3903;Note=belongs to rhodanese family%3B thiosulfate thiotransferase%3B in Escherichia coli this enzyme catalyzes the formation of thiocyanate from thiosulfate and cyanide with low efficiency%3B contains an active site cysteine;Dbxref=Genbank:YP_002404774.1,GeneID:7146321;gbkey=CDS;product=thiosulfate sulfurtransferase;protein_id=YP_002404774.1;transl_table=11
NC_011748.1	RefSeq	gene	3897259	3898764	.	+	.	ID=gene3904;Name=glpD;Dbxref=GeneID:7146319;gbkey=Gene;gene=glpD;locus_tag=EC55989_3833
NC_011748.1	RefSeq	CDS	3897259	3898764	.	+	0	ID=cds3628;Name=YP_002404775.1;Parent=gene3904;Note=in Escherichia coli this homodimeric enzyme is expressed under aerobic conditions%3B anaerobic expression is repressed by the arcAB system%3B converts sn-glycerol-3-phosphate and ubiquinone-8 to dihydroxy acetone phosphate and ubiquinol-8%3B associates with the cytoplasmic membrane;Dbxref=Genbank:YP_002404775.1,GeneID:7146319;gbkey=CDS;product=glycerol-3-phosphate dehydrogenase;protein_id=YP_002404775.1;transl_table=11
NC_011748.1	RefSeq	gene	3898816	3899421	.	-	.	ID=gene3905;Name=EC55989_3834;Dbxref=GeneID:7146318;gbkey=Gene;locus_tag=EC55989_3834
NC_011748.1	RefSeq	CDS	3898816	3899421	.	-	0	ID=cds3629;Name=YP_002404776.1;Parent=gene3905;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404776.1,GeneID:7146318;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404776.1;transl_table=11
NC_011748.1	RefSeq	gene	3899424	3900191	.	-	.	ID=gene3906;Name=EC55989_3835;Dbxref=GeneID:7145015;gbkey=Gene;locus_tag=EC55989_3835
NC_011748.1	RefSeq	CDS	3899424	3900191	.	-	0	ID=cds3630;Name=YP_002404777.1;Parent=gene3906;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404777.1,GeneID:7145015;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404777.1;transl_table=11
NC_011748.1	RefSeq	gene	3900194	3900904	.	-	.	ID=gene3907;Name=EC55989_3836;Dbxref=GeneID:7145016;gbkey=Gene;locus_tag=EC55989_3836
NC_011748.1	RefSeq	CDS	3900194	3900904	.	-	0	ID=cds3631;Name=YP_002404778.1;Parent=gene3907;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404778.1,GeneID:7145016;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404778.1;transl_table=11
NC_011748.1	RefSeq	gene	3900920	3902437	.	-	.	ID=gene3908;Name=EC55989_3837;Dbxref=GeneID:7145017;gbkey=Gene;locus_tag=EC55989_3837
NC_011748.1	RefSeq	CDS	3900920	3902437	.	-	0	ID=cds3632;Name=YP_002404779.1;Parent=gene3908;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404779.1,GeneID:7145017;gbkey=CDS;product=membrane protein%3B ATP binding protein of ABC transporter;protein_id=YP_002404779.1;transl_table=11
NC_011748.1	RefSeq	gene	3902553	3905000	.	-	.	ID=gene3909;Name=glgP;Dbxref=GeneID:7145018;gbkey=Gene;gene=glgP;locus_tag=EC55989_3838
NC_011748.1	RefSeq	CDS	3902553	3905000	.	-	0	ID=cds3633;Name=YP_002404780.1;Parent=gene3909;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 88330897%2C 91104907%2C 91236706%2C 2645169%2C 2975249%2C 3047129%2C 3097003%3B Product type e : enzyme;Dbxref=Genbank:YP_002404780.1,GeneID:7145018;gbkey=CDS;product=glycogen phosphorylase;protein_id=YP_002404780.1;transl_table=11
NC_011748.1	RefSeq	gene	3905019	3906452	.	-	.	ID=gene3910;Name=glgA;Dbxref=GeneID:7146295;gbkey=Gene;gene=glgA;locus_tag=EC55989_3839
NC_011748.1	RefSeq	CDS	3905019	3906452	.	-	0	ID=cds3634;Name=YP_002404781.1;Parent=gene3910;Note=catalyzes the formation of alpha-1%2C4-glucan chains from ADP-glucose;Dbxref=Genbank:YP_002404781.1,GeneID:7146295;gbkey=CDS;product=glycogen synthase;protein_id=YP_002404781.1;transl_table=11
NC_011748.1	RefSeq	gene	3906452	3907747	.	-	.	ID=gene3911;Name=glgC;Dbxref=GeneID:7146292;gbkey=Gene;gene=glgC;locus_tag=EC55989_3840
NC_011748.1	RefSeq	CDS	3906452	3907747	.	-	0	ID=cds3635;Name=YP_002404782.1;Parent=gene3911;Note=catalyzes the formation of ADP-glucose and diphosphate from ATP and alpha-D-glucose 1-phosphate;Dbxref=Genbank:YP_002404782.1,GeneID:7146292;gbkey=CDS;product=glucose-1-phosphate adenylyltransferase;protein_id=YP_002404782.1;transl_table=11
NC_011748.1	RefSeq	gene	3907765	3909738	.	-	.	ID=gene3912;Name=glgX;Dbxref=GeneID:7146294;gbkey=Gene;gene=glgX;locus_tag=EC55989_3841
NC_011748.1	RefSeq	CDS	3907765	3909738	.	-	0	ID=cds3636;Name=YP_002404783.1;Parent=gene3912;Note=catalyzes the hydrolysis of the alpha-1%2C6-glucosidic linkages in partially depolymerized glycogen;Dbxref=Genbank:YP_002404783.1,GeneID:7146294;gbkey=CDS;product=glycogen debranching protein;protein_id=YP_002404783.1;transl_table=11
NC_011748.1	RefSeq	gene	3909735	3911921	.	-	.	ID=gene3913;Name=glgB;Dbxref=GeneID:7146297;gbkey=Gene;gene=glgB;locus_tag=EC55989_3842
NC_011748.1	RefSeq	CDS	3909735	3911921	.	-	0	ID=cds3637;Name=YP_002404784.1;Parent=gene3913;Note=catalyzes the transfer of a segment of a 1%2C4-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain;Dbxref=Genbank:YP_002404784.1,GeneID:7146297;gbkey=CDS;product=glycogen branching protein;protein_id=YP_002404784.1;transl_table=11
NC_011748.1	RefSeq	gene	3912194	3913297	.	-	.	ID=gene3914;Name=asd;Dbxref=GeneID:7146293;gbkey=Gene;gene=asd;locus_tag=EC55989_3843
NC_011748.1	RefSeq	CDS	3912194	3913297	.	-	0	ID=cds3638;Name=YP_002404785.1;Parent=gene3914;Note=catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde;Dbxref=Genbank:YP_002404785.1,GeneID:7146293;gbkey=CDS;product=aspartate-semialdehyde dehydrogenase;protein_id=YP_002404785.1;transl_table=11
NC_011748.1	RefSeq	gene	3913490	3914083	.	+	.	ID=gene3915;Name=yhgN;Dbxref=GeneID:7145563;gbkey=Gene;gene=yhgN;locus_tag=EC55989_3844
NC_011748.1	RefSeq	CDS	3913490	3914083	.	+	0	ID=cds3639;Name=YP_002404786.1;Parent=gene3915;Note=YhgN%3B Ec0197%3B hydrolyzes nucleoside triphosphates with an O6 atom-containing purine base to nucleoside monophosphate and pyrophosphate%3B seems to play a role in the elimination of aberrant purine-derived nucleotides containing the 6-keto group%3B shows preference for deoxyinosine triphosphate and xanthosine triphosphate over standard nucleoside triphosphates %28dATP%2C dCTP%2C dGTP%2C and dTTP%29;Dbxref=Genbank:YP_002404786.1,GeneID:7145563;gbkey=CDS;product=dITP- and XTP- hydrolase;protein_id=YP_002404786.1;transl_table=11
NC_011748.1	RefSeq	gene	3914140	3915480	.	-	.	ID=gene3916;Name=gntU;Dbxref=GeneID:7148975;gbkey=Gene;gene=gntU;locus_tag=EC55989_3845
NC_011748.1	RefSeq	CDS	3914140	3915480	.	-	0	ID=cds3640;Name=YP_002404787.1;Parent=gene3916;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 8655507%2C 9119199%2C 9135111%2C 97141270%3B Product type t : transporter;Dbxref=Genbank:YP_002404787.1,GeneID:7148975;gbkey=CDS;product=low affinity gluconate transporter;protein_id=YP_002404787.1;transl_table=11
NC_011748.1	RefSeq	gene	3915484	3916011	.	-	.	ID=gene3917;Name=gntK;Dbxref=GeneID:7146353;gbkey=Gene;gene=gntK;locus_tag=EC55989_3846
NC_011748.1	RefSeq	CDS	3915484	3916011	.	-	0	ID=cds3641;Name=YP_002404788.1;Parent=gene3917;Note=thermoresistant%3B catalyzes the formation of 6-phospho-D-gluconate from gluconate;Dbxref=Genbank:YP_002404788.1,GeneID:7146353;gbkey=CDS;product=gluconate kinase;protein_id=YP_002404788.1;transl_table=11
NC_011748.1	RefSeq	gene	3916150	3917145	.	-	.	ID=gene3918;Name=gntR;Dbxref=GeneID:7146349;gbkey=Gene;gene=gntR;locus_tag=EC55989_3847
NC_011748.1	RefSeq	CDS	3916150	3917145	.	-	0	ID=cds3642;Name=YP_002404789.1;Parent=gene3918;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 172599%2C 9135111%2C 93139975%2C 9537375%2C 8655507%3B Product type r : regulator;Dbxref=Genbank:YP_002404789.1,GeneID:7146349;gbkey=CDS;product=DNA-binding transcriptional repressor;protein_id=YP_002404789.1;transl_table=11
NC_011748.1	RefSeq	gene	3917369	3918064	.	-	.	ID=gene3919;Name=yhhW;Dbxref=GeneID:7146351;gbkey=Gene;gene=yhhW;locus_tag=EC55989_3848
NC_011748.1	RefSeq	CDS	3917369	3918064	.	-	0	ID=cds3643;Name=YP_002404790.1;Parent=gene3919;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404790.1,GeneID:7146351;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404790.1;transl_table=11
NC_011748.1	RefSeq	gene	3918187	3919224	.	-	.	ID=gene3920;Name=yhhX;Dbxref=GeneID:7148991;gbkey=Gene;gene=yhhX;locus_tag=EC55989_3849
NC_011748.1	RefSeq	CDS	3918187	3919224	.	-	0	ID=cds3644;Name=YP_002404791.1;Parent=gene3920;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 10493123%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002404791.1,GeneID:7148991;gbkey=CDS;product=dehydrogenase;protein_id=YP_002404791.1;transl_table=11
NC_011748.1	RefSeq	gene	3919345	3919434	.	-	.	ID=gene3921;Name=ryhB;Dbxref=GeneID:7148992;gbkey=Gene;gene=ryhB;locus_tag=EC55989_misc_RNA_87
NC_011748.1	RefSeq	transcript	3919345	3919434	.	-	.	ID=rna164;Parent=gene3921;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 11917098%3B Product type n : RNA;Dbxref=GeneID:7148992;gbkey=misc_RNA;product=RyhB
NC_011748.1	RefSeq	exon	3919345	3919434	.	-	.	ID=id318;Parent=rna164;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 11917098%3B Product type n : RNA;Dbxref=GeneID:7148992;gbkey=misc_RNA;product=RyhB
NC_011748.1	RefSeq	gene	3919556	3920044	.	+	.	ID=gene3922;Name=yhhY;Dbxref=GeneID:7147592;gbkey=Gene;gene=yhhY;locus_tag=EC55989_3850
NC_011748.1	RefSeq	CDS	3919556	3920044	.	+	0	ID=cds3645;Name=YP_002404792.1;Parent=gene3922;Note=YhhY%3B regulated by the fur regulator%3B unknown function;Dbxref=Genbank:YP_002404792.1,GeneID:7147592;gbkey=CDS;product=acetyltransferase YhhY;protein_id=YP_002404792.1;transl_table=11
NC_011748.1	RefSeq	gene	3920281	3921459	.	+	.	ID=gene3923;Name=yhhZ;Dbxref=GeneID:7148993;gbkey=Gene;gene=yhhZ;locus_tag=EC55989_3851
NC_011748.1	RefSeq	CDS	3920281	3921459	.	+	0	ID=cds3646;Name=YP_002404793.1;Parent=gene3923;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404793.1,GeneID:7148993;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404793.1;transl_table=11
NC_011748.1	RefSeq	gene	3921456	3921950	.	+	.	ID=gene3924;Name=yrhA;Dbxref=GeneID:7148994;gbkey=Gene;gene=yrhA;locus_tag=EC55989_3852
NC_011748.1	RefSeq	CDS	3921456	3921950	.	+	0	ID=cds3647;Name=YP_002404794.1;Parent=gene3924;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404794.1,GeneID:7148994;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404794.1;transl_table=11
NC_011748.1	RefSeq	gene	3922036	3922200	.	+	.	ID=gene3925;Name=yrhD;Dbxref=GeneID:7149464;gbkey=Gene;gene=yrhD;locus_tag=EC55989_3853
NC_011748.1	RefSeq	CDS	3922036	3922200	.	+	0	ID=cds3648;Name=YP_002404795.1;Parent=gene3925;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404795.1,GeneID:7149464;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404795.1;transl_table=11
NC_011748.1	RefSeq	gene	3922400	3922684	.	+	.	ID=gene3926;Name=yrhB;Dbxref=GeneID:7149466;gbkey=Gene;gene=yrhB;locus_tag=EC55989_3854
NC_011748.1	RefSeq	CDS	3922400	3922684	.	+	0	ID=cds3649;Name=YP_002404796.1;Parent=gene3926;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404796.1,GeneID:7149466;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404796.1;transl_table=11
NC_011748.1	RefSeq	gene	3922722	3924464	.	-	.	ID=gene3927;Name=ggt;Dbxref=GeneID:7149465;gbkey=Gene;gene=ggt;locus_tag=EC55989_3855
NC_011748.1	RefSeq	CDS	3922722	3924464	.	-	0	ID=cds3650;Name=YP_002404797.1;Parent=gene3927;Note=periplasmic enzyme%3B post-translationally processed into two subunits which are required for wild-type enzyme activity%3B cleaves the gammaglutamyl linkages of compounds such as glutathione and transfer the gammaglutamyl group to other amino acids and peptides;Dbxref=Genbank:YP_002404797.1,GeneID:7149465;gbkey=CDS;product=gamma-glutamyltranspeptidase;protein_id=YP_002404797.1;transl_table=11
NC_011748.1	RefSeq	gene	3924584	3925024	.	+	.	ID=gene3928;Name=yhhA;Dbxref=GeneID:7146282;gbkey=Gene;gene=yhhA;locus_tag=EC55989_3856
NC_011748.1	RefSeq	CDS	3924584	3925024	.	+	0	ID=cds3651;Name=YP_002404798.1;Parent=gene3928;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404798.1,GeneID:7146282;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404798.1;transl_table=11
NC_011748.1	RefSeq	gene	3925011	3925754	.	-	.	ID=gene3929;Name=ugpQ;Dbxref=GeneID:7148976;gbkey=Gene;gene=ugpQ;locus_tag=EC55989_3857
NC_011748.1	RefSeq	CDS	3925011	3925754	.	-	0	ID=cds3652;Name=YP_002404799.1;Parent=gene3929;Note=hydrolyzes diesters during transport at the inner face of the cytoplasmic membrane to glycerol-3-phosphate and alcohol%3B induced when cells are starved for inorganic phosphate;Dbxref=Genbank:YP_002404799.1,GeneID:7148976;gbkey=CDS;product=glycerophosphodiester phosphodiesterase;protein_id=YP_002404799.1;transl_table=11
NC_011748.1	RefSeq	gene	3925751	3926821	.	-	.	ID=gene3930;Name=ugpC;Dbxref=GeneID:7147904;gbkey=Gene;gene=ugpC;locus_tag=EC55989_3858
NC_011748.1	RefSeq	CDS	3925751	3926821	.	-	0	ID=cds3653;Name=YP_002404800.1;Parent=gene3930;Note=part of the UgpABCE glycerol-3-phosphate uptake system;Dbxref=Genbank:YP_002404800.1,GeneID:7147904;gbkey=CDS;product=glycerol-3-phosphate transporter ATP-binding subunit;protein_id=YP_002404800.1;transl_table=11
NC_011748.1	RefSeq	gene	3926823	3927668	.	-	.	ID=gene3931;Name=ugpE;Dbxref=GeneID:7147902;gbkey=Gene;gene=ugpE;locus_tag=EC55989_3859
NC_011748.1	RefSeq	CDS	3926823	3927668	.	-	0	ID=cds3654;Name=YP_002404801.1;Parent=gene3931;Note=with UgpABC is involved in uptake of glycerol-3-phosphate;Dbxref=Genbank:YP_002404801.1,GeneID:7147902;gbkey=CDS;product=glycerol-3-phosphate transporter membrane protein;protein_id=YP_002404801.1;transl_table=11
NC_011748.1	RefSeq	gene	3927665	3928552	.	-	.	ID=gene3932;Name=ugpA;Dbxref=GeneID:7147903;gbkey=Gene;gene=ugpA;locus_tag=EC55989_3860
NC_011748.1	RefSeq	CDS	3927665	3928552	.	-	0	ID=cds3655;Name=YP_002404802.1;Parent=gene3932;Note=with UgpEC is involved in the uptake of glycerol-3-phosphate;Dbxref=Genbank:YP_002404802.1,GeneID:7147903;gbkey=CDS;product=glycerol-3-phosphate transporter permease;protein_id=YP_002404802.1;transl_table=11
NC_011748.1	RefSeq	gene	3928650	3929966	.	-	.	ID=gene3933;Name=ugpB;Dbxref=GeneID:7147900;gbkey=Gene;gene=ugpB;locus_tag=EC55989_3861
NC_011748.1	RefSeq	CDS	3928650	3929966	.	-	0	ID=cds3656;Name=YP_002404803.1;Parent=gene3933;Note=with UgpACE is involved in the uptake of glycerol-3-phosphate;Dbxref=Genbank:YP_002404803.1,GeneID:7147900;gbkey=CDS;product=glycerol-3-phosphate transporter periplasmic binding protein;protein_id=YP_002404803.1;transl_table=11
NC_011748.1	RefSeq	gene	3930362	3931075	.	-	.	ID=gene3934;Name=livF;Dbxref=GeneID:7147901;gbkey=Gene;gene=livF;locus_tag=EC55989_3862
NC_011748.1	RefSeq	CDS	3930362	3931075	.	-	0	ID=cds3657;Name=YP_002404804.1;Parent=gene3934;Note=with LivGHMJ and LivGHMK is part of the high-affinity branched-chain amino acid transport system%3B LivFGHMK is specific for the transport of leucine%2C while LivFGHMJ is a transporter for leucine%2C isoleucine%2C and valine;Dbxref=Genbank:YP_002404804.1,GeneID:7147901;gbkey=CDS;product=leucine%2Fisoleucine%2Fvaline transporter ATP-binding subunit;protein_id=YP_002404804.1;transl_table=11
NC_011748.1	RefSeq	gene	3931077	3931844	.	-	.	ID=gene3935;Name=livG;Dbxref=GeneID:7146705;gbkey=Gene;gene=livG;locus_tag=EC55989_3863
NC_011748.1	RefSeq	CDS	3931077	3931844	.	-	0	ID=cds3658;Name=YP_002404805.1;Parent=gene3935;Note=Part of the ABC transporter complexes LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids%3B LivFGHMK is specific for the transport of leucine%2C while LivFGHMJ is a transporter for leucine%2C isoleucine%2C and valine;Dbxref=Genbank:YP_002404805.1,GeneID:7146705;gbkey=CDS;product=leucine%2Fisoleucine%2Fvaline transporter ATP-binding subunit;protein_id=YP_002404805.1;transl_table=11
NC_011748.1	RefSeq	gene	3931841	3933118	.	-	.	ID=gene3936;Name=livM;Dbxref=GeneID:7146706;gbkey=Gene;gene=livM;locus_tag=EC55989_3864
NC_011748.1	RefSeq	CDS	3931841	3933118	.	-	0	ID=cds3659;Name=YP_002404806.1;Parent=gene3936;Note=Part of the ABC transporter complex LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids%3B LivFGHMK is specific for the transport of leucine%2C while LivFGHMJ is a transporter for leucine%2C isoleucine%2C and valine;Dbxref=Genbank:YP_002404806.1,GeneID:7146706;gbkey=CDS;product=leucine%2Fisoleucine%2Fvaline transporter permease subunit;protein_id=YP_002404806.1;transl_table=11
NC_011748.1	RefSeq	gene	3933115	3934041	.	-	.	ID=gene3937;Name=livH;Dbxref=GeneID:7146710;gbkey=Gene;gene=livH;locus_tag=EC55989_3865
NC_011748.1	RefSeq	CDS	3933115	3934041	.	-	0	ID=cds3660;Name=YP_002404807.1;Parent=gene3937;Note=LivHMGF is the membrane component of the LIV-I%2FLS branched-chain amino acid transporter;Dbxref=Genbank:YP_002404807.1,GeneID:7146710;gbkey=CDS;product=branched-chain amino acid transporter permease subunit LivH;protein_id=YP_002404807.1;transl_table=11
NC_011748.1	RefSeq	gene	3934089	3935198	.	-	.	ID=gene3938;Name=livK;Dbxref=GeneID:7146707;gbkey=Gene;gene=livK;locus_tag=EC55989_3866
NC_011748.1	RefSeq	CDS	3934089	3935198	.	-	0	ID=cds3661;Name=YP_002404808.1;Parent=gene3938;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 14702302%2C 90307651%2C 2195019%2C 2649683%2C 3891753%2C 4077929%2C 9298646%2C 9298646%3B Product type t : transporter;Dbxref=Genbank:YP_002404808.1,GeneID:7146707;gbkey=CDS;product=leucine ABC transporter subunit substrate-binding protein;protein_id=YP_002404808.1;transl_table=11
NC_011748.1	RefSeq	gene	3935622	3936005	.	+	.	ID=gene3939;Name=yhhK;Dbxref=GeneID:7146709;gbkey=Gene;gene=yhhK;locus_tag=EC55989_3867
NC_011748.1	RefSeq	CDS	3935622	3936005	.	+	0	ID=cds3662;Name=YP_002404809.1;Parent=gene3939;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404809.1,GeneID:7146709;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404809.1;transl_table=11
NC_011748.1	RefSeq	gene	3936204	3937307	.	-	.	ID=gene3940;Name=livJ;Dbxref=GeneID:7148985;gbkey=Gene;gene=livJ;locus_tag=EC55989_3868
NC_011748.1	RefSeq	CDS	3936204	3937307	.	-	0	ID=cds3663;Name=YP_002404810.1;Parent=gene3940;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 14702302%2C 90307651%2C 2195019%2C 2649682%2C 328304%2C 3891753%2C 4077929%2C 9298646%2C 10972807%3B Product type t : transporter;Dbxref=Genbank:YP_002404810.1,GeneID:7148985;gbkey=CDS;product=leucine%2Fisoleucine%2Fvaline transporter subunit %3B periplasmic-binding component of ABC superfamily;protein_id=YP_002404810.1;transl_table=11
NC_011748.1	RefSeq	gene	3937578	3938432	.	-	.	ID=gene3941;Name=rpoH;Dbxref=GeneID:7146708;gbkey=Gene;gene=rpoH;locus_tag=EC55989_3869
NC_011748.1	RefSeq	CDS	3937578	3938432	.	-	0	ID=cds3664;Name=YP_002404811.1;Parent=gene3941;Note=binds with the catalytic core of RNA polymerase to produce the holoenzyme%3B this sigma factor is responsible for the expression of heat shock promoters;Dbxref=Genbank:YP_002404811.1,GeneID:7146708;gbkey=CDS;product=RNA polymerase factor sigma-32;protein_id=YP_002404811.1;transl_table=11
NC_011748.1	RefSeq	gene	3938677	3939735	.	-	.	ID=gene3942;Name=ftsX;Dbxref=GeneID:7147500;gbkey=Gene;gene=ftsX;locus_tag=EC55989_3870
NC_011748.1	RefSeq	CDS	3938677	3939735	.	-	0	ID=cds3665;Name=YP_002404812.1;Parent=gene3942;Note=ABC transporter%2C membrane protein;Dbxref=Genbank:YP_002404812.1,GeneID:7147500;gbkey=CDS;product=cell division protein FtsX;protein_id=YP_002404812.1;transl_table=11
NC_011748.1	RefSeq	gene	3939728	3940396	.	-	.	ID=gene3943;Name=ftsE;Dbxref=GeneID:7146220;gbkey=Gene;gene=ftsE;locus_tag=EC55989_3871
NC_011748.1	RefSeq	CDS	3939728	3940396	.	-	0	ID=cds3666;Name=YP_002404813.1;Parent=gene3943;Note=ATP-binding protein of an ATP-binding cassette transporter%3B when bound to FtsX%2C FtsEX localizes to the cell division site and plays a role in the assembly or stability of the septal ring under low-salt growth conditions;Dbxref=Genbank:YP_002404813.1,GeneID:7146220;gbkey=CDS;product=cell division protein FtsE;protein_id=YP_002404813.1;transl_table=11
NC_011748.1	RefSeq	gene	3940399	3941892	.	-	.	ID=gene3944;Name=ftsY;Dbxref=GeneID:7146212;gbkey=Gene;gene=ftsY;locus_tag=EC55989_3872
NC_011748.1	RefSeq	CDS	3940399	3941892	.	-	0	ID=cds3667;Name=YP_002404814.1;Parent=gene3944;Note=signal recognition protein receptor%3B functions in the targeting and insertion of membrane proteins;Dbxref=Genbank:YP_002404814.1,GeneID:7146212;gbkey=CDS;product=cell division protein FtsY;protein_id=YP_002404814.1;transl_table=11
NC_011748.1	RefSeq	gene	3942042	3942638	.	+	.	ID=gene3945;Name=rsmD;Dbxref=GeneID:7146221;gbkey=Gene;gene=rsmD;locus_tag=EC55989_3873
NC_011748.1	RefSeq	CDS	3942042	3942638	.	+	0	ID=cds3668;Name=YP_002404815.1;Parent=gene3945;Note=catalyzes the methylation of 16S rRNA at position G966;Dbxref=Genbank:YP_002404815.1,GeneID:7146221;gbkey=CDS;product=16S rRNA m%282%29G966-methyltransferase;protein_id=YP_002404815.1;transl_table=11
NC_011748.1	RefSeq	gene	3942505	3942897	.	+	.	ID=gene3946;Name=EC55989_3874;Dbxref=GeneID:7148977;gbkey=Gene;locus_tag=EC55989_3874
NC_011748.1	RefSeq	CDS	3942505	3942897	.	+	0	ID=cds3669;Name=YP_002404816.1;Parent=gene3946;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404816.1,GeneID:7148977;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404816.1;transl_table=11
NC_011748.1	RefSeq	gene	3942900	3943259	.	-	.	ID=gene3947;Name=yhhM;Dbxref=GeneID:7145019;gbkey=Gene;gene=yhhM;locus_tag=EC55989_3875
NC_011748.1	RefSeq	CDS	3942900	3943259	.	-	0	ID=cds3670;Name=YP_002404817.1;Parent=gene3947;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404817.1,GeneID:7145019;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404817.1;transl_table=11
NC_011748.1	RefSeq	gene	3943400	3944026	.	+	.	ID=gene3948;Name=yhhN;Dbxref=GeneID:7148986;gbkey=Gene;gene=yhhN;locus_tag=EC55989_3876
NC_011748.1	RefSeq	CDS	3943400	3944026	.	+	0	ID=cds3671;Name=YP_002404818.1;Parent=gene3948;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002404818.1,GeneID:7148986;gbkey=CDS;product=inner membrane protein;protein_id=YP_002404818.1;transl_table=11
NC_011748.1	RefSeq	gene	3944100	3946298	.	+	.	ID=gene3949;Name=zntA;Dbxref=GeneID:7148987;gbkey=Gene;gene=zntA;locus_tag=EC55989_3877
NC_011748.1	RefSeq	CDS	3944100	3946298	.	+	0	ID=cds3672;Name=YP_002404819.1;Parent=gene3949;Note=P-type ATPase involved in the export of lead%2C cadmium%2C zinc and mercury;Dbxref=Genbank:YP_002404819.1,GeneID:7148987;gbkey=CDS;product=zinc%2Fcadmium%2Fmercury%2Flead-transporting ATPase;protein_id=YP_002404819.1;transl_table=11
NC_011748.1	RefSeq	gene	3946400	3946645	.	-	.	ID=gene3950;Name=tusA;Dbxref=GeneID:7149490;gbkey=Gene;gene=tusA;locus_tag=EC55989_3878
NC_011748.1	RefSeq	CDS	3946400	3946645	.	-	0	ID=cds3673;Name=YP_002404820.1;Parent=gene3950;Note=TusA%3B transfers sulfur to TusBCD complex%3B involved in thiouridation of U34 position of some tRNAs;Dbxref=Genbank:YP_002404820.1,GeneID:7149490;gbkey=CDS;product=sulfur transfer protein SirA;protein_id=YP_002404820.1;transl_table=11
NC_011748.1	RefSeq	gene	3946866	3947531	.	+	.	ID=gene3951;Name=yhhQ;Dbxref=GeneID:7147875;gbkey=Gene;gene=yhhQ;locus_tag=EC55989_3879
NC_011748.1	RefSeq	CDS	3946866	3947531	.	+	0	ID=cds3674;Name=YP_002404821.1;Parent=gene3951;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002404821.1,GeneID:7147875;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404821.1;transl_table=11
NC_011748.1	RefSeq	gene	3947604	3948161	.	+	.	ID=gene3952;Name=dcrB;Dbxref=GeneID:7148988;gbkey=Gene;gene=dcrB;locus_tag=EC55989_3880
NC_011748.1	RefSeq	CDS	3947604	3948161	.	+	0	ID=cds3675;Name=YP_002404822.1;Parent=gene3952;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 12558182%2C 8752353%3B Product type t : transporter;Dbxref=Genbank:YP_002404822.1,GeneID:7148988;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404822.1;transl_table=11
NC_011748.1	RefSeq	gene	3948165	3949382	.	-	.	ID=gene3953;Name=yhhS;Dbxref=GeneID:7145858;gbkey=Gene;gene=yhhS;locus_tag=EC55989_3881
NC_011748.1	RefSeq	CDS	3948165	3949382	.	-	0	ID=cds3676;Name=YP_002404823.1;Parent=gene3953;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002404823.1,GeneID:7145858;gbkey=CDS;product=major facilitator superfamily transporter;protein_id=YP_002404823.1;transl_table=11
NC_011748.1	RefSeq	gene	3949514	3950563	.	+	.	ID=gene3954;Name=yhhT;Dbxref=GeneID:7148989;gbkey=Gene;gene=yhhT;locus_tag=EC55989_3882
NC_011748.1	RefSeq	CDS	3949514	3950563	.	+	0	ID=cds3677;Name=YP_002404824.1;Parent=gene3954;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002404824.1,GeneID:7148989;gbkey=CDS;product=inner membrane protein;protein_id=YP_002404824.1;transl_table=11
NC_011748.1	RefSeq	gene	3950618	3951205	.	+	.	ID=gene3955;Name=acpT;Dbxref=GeneID:7148990;gbkey=Gene;gene=acpT;locus_tag=EC55989_3883
NC_011748.1	RefSeq	CDS	3950618	3951205	.	+	0	ID=cds3678;Name=YP_002404825.1;Parent=gene3955;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 20092861%2C 10625633%2C 8939709%3B Product type e : enzyme;Dbxref=Genbank:YP_002404825.1,GeneID:7148990;gbkey=CDS;product=holo-%28acyl carrier protein%29 synthase 2;protein_id=YP_002404825.1;transl_table=11
NC_011748.1	RefSeq	gene	3951316	3952890	.	+	.	ID=gene3956;Name=nikA;Dbxref=GeneID:7145443;gbkey=Gene;gene=nikA;locus_tag=EC55989_3884
NC_011748.1	RefSeq	CDS	3951316	3952890	.	+	0	ID=cds3679;Name=YP_002404826.1;Parent=gene3956;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 12960164%2C 7934931%2C 92077434%2C 7867647%3B Product type t : transporter;Dbxref=Genbank:YP_002404826.1,GeneID:7145443;gbkey=CDS;product=nickel transporter subunit %3B periplasmic-binding component of ABC superfamily;protein_id=YP_002404826.1;transl_table=11
NC_011748.1	RefSeq	gene	3952890	3953834	.	+	.	ID=gene3957;Name=nikB;Dbxref=GeneID:7146995;gbkey=Gene;gene=nikB;locus_tag=EC55989_3885
NC_011748.1	RefSeq	CDS	3952890	3953834	.	+	0	ID=cds3680;Name=YP_002404827.1;Parent=gene3957;Note=with NikACDE is involved in nickel transport into the cell;Dbxref=Genbank:YP_002404827.1,GeneID:7146995;gbkey=CDS;product=nickel transporter permease NikB;protein_id=YP_002404827.1;transl_table=11
NC_011748.1	RefSeq	gene	3953831	3954664	.	+	.	ID=gene3958;Name=nikC;Dbxref=GeneID:7146996;gbkey=Gene;gene=nikC;locus_tag=EC55989_3886
NC_011748.1	RefSeq	CDS	3953831	3954664	.	+	0	ID=cds3681;Name=YP_002404828.1;Parent=gene3958;Note=with NikABDE is involved in nickel transport into the cell;Dbxref=Genbank:YP_002404828.1,GeneID:7146996;gbkey=CDS;product=nickel transporter permease NikC;protein_id=YP_002404828.1;transl_table=11
NC_011748.1	RefSeq	gene	3954664	3955428	.	+	.	ID=gene3959;Name=nikD;Dbxref=GeneID:7146997;gbkey=Gene;gene=nikD;locus_tag=EC55989_3887
NC_011748.1	RefSeq	CDS	3954664	3955428	.	+	0	ID=cds3682;Name=YP_002404829.1;Parent=gene3959;Note=with NikABCE is involved in nickel transport into the cell;Dbxref=Genbank:YP_002404829.1,GeneID:7146997;gbkey=CDS;product=nickel transporter ATP-binding protein NikD;protein_id=YP_002404829.1;transl_table=11
NC_011748.1	RefSeq	gene	3955425	3956231	.	+	.	ID=gene3960;Name=nikE;Dbxref=GeneID:7146998;gbkey=Gene;gene=nikE;locus_tag=EC55989_3888
NC_011748.1	RefSeq	CDS	3955425	3956231	.	+	0	ID=cds3683;Name=YP_002404830.1;Parent=gene3960;Note=with NikABCD is involved with nickel transport into the cell;Dbxref=Genbank:YP_002404830.1,GeneID:7146998;gbkey=CDS;product=nickel transporter ATP-binding protein NikE;protein_id=YP_002404830.1;transl_table=11
NC_011748.1	RefSeq	gene	3956237	3956638	.	+	.	ID=gene3961;Name=nikR;Dbxref=GeneID:7146999;gbkey=Gene;gene=nikR;locus_tag=EC55989_3889
NC_011748.1	RefSeq	CDS	3956237	3956638	.	+	0	ID=cds3684;Name=YP_002404831.1;Parent=gene3961;Note=Inhibits transcription at high concentrations of nickel;Dbxref=Genbank:YP_002404831.1,GeneID:7146999;gbkey=CDS;product=nickel responsive regulator;protein_id=YP_002404831.1;transl_table=11
NC_011748.1	RefSeq	gene	3956758	3957117	.	-	.	ID=gene3962;Name=EC55989_3890;Dbxref=GeneID:7147000;gbkey=Gene;locus_tag=EC55989_3890
NC_011748.1	RefSeq	CDS	3956758	3957117	.	-	0	ID=cds3685;Name=YP_002404832.1;Parent=gene3962;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404832.1,GeneID:7147000;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404832.1;transl_table=11
NC_011748.1	RefSeq	gene	3957448	3958572	.	-	.	ID=gene3963;Name=yhhJ;Dbxref=GeneID:7145020;gbkey=Gene;gene=yhhJ;locus_tag=EC55989_3891
NC_011748.1	RefSeq	CDS	3957448	3958572	.	-	0	ID=cds3686;Name=YP_002404833.1;Parent=gene3963;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002404833.1,GeneID:7145020;gbkey=CDS;product=transporter subunit: membrane component of ABC superfamily;protein_id=YP_002404833.1;transl_table=11
NC_011748.1	RefSeq	gene	3958572	3961307	.	-	.	ID=gene3964;Name=rbbA;Dbxref=GeneID:7148984;gbkey=Gene;gene=rbbA;locus_tag=EC55989_3892
NC_011748.1	RefSeq	CDS	3958572	3961307	.	-	0	ID=cds3687;Name=YP_002404834.1;Parent=gene3964;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 20074572%3B Product type e : enzyme;Dbxref=Genbank:YP_002404834.1,GeneID:7148984;gbkey=CDS;product=fused ribosome-associated ATPase: ATP-binding protein %3B ATP-binding protein %3B membrane protein;protein_id=YP_002404834.1;transl_table=11
NC_011748.1	RefSeq	gene	3961304	3962371	.	-	.	ID=gene3965;Name=yhiI;Dbxref=GeneID:7147338;gbkey=Gene;gene=yhiI;locus_tag=EC55989_3893
NC_011748.1	RefSeq	CDS	3961304	3962371	.	-	0	ID=cds3688;Name=YP_002404835.1;Parent=gene3965;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002404835.1,GeneID:7147338;gbkey=CDS;product=HlyD family secretion protein;protein_id=YP_002404835.1;transl_table=11
NC_011748.1	RefSeq	STS	3962470	3963893	.	+	.	ID=id319;Dbxref=UniSTS:515533;gbkey=STS
NC_011748.1	RefSeq	gene	3962737	3964089	.	-	.	ID=gene3966;Name=yhiJ;Dbxref=GeneID:7148997;gbkey=Gene;gene=yhiJ;locus_tag=EC55989_3894;pseudo=true
NC_011748.1	RefSeq	region	3962737	3964089	.	-	.	ID=id320;Note=fragment of conserved hypothetical protein %28part 2%29%3BEvidence 7 : Gene remnant;Dbxref=GeneID:7148997;gbkey=misc_feature
NC_011748.1	RefSeq	gene	3964164	3964358	.	-	.	ID=gene3967;Name=yhiJ;Dbxref=GeneID:7148998;gbkey=Gene;gene=yhiJ;locus_tag=EC55989_3895;pseudo=true
NC_011748.1	RefSeq	region	3964164	3964358	.	-	.	ID=id321;Note=fragment of conserved hypothetical protein %28part 1%29%3BEvidence 7 : Gene remnant;Dbxref=GeneID:7148998;gbkey=misc_feature
NC_011748.1	RefSeq	gene	3964620	3965012	.	-	.	ID=gene3968;Name=EC55989_3896;Dbxref=GeneID:7148999;gbkey=Gene;locus_tag=EC55989_3896;pseudo=true
NC_011748.1	RefSeq	region	3964620	3965012	.	-	.	ID=id322;Note=fragment of conserved hypothetical protein %28part 2%29%3BEvidence 7 : Gene remnant;Dbxref=GeneID:7148999;gbkey=misc_feature
NC_011748.1	RefSeq	gene	3965159	3966244	.	-	.	ID=gene3969;Name=EC55989_3897;Dbxref=GeneID:7145021;gbkey=Gene;locus_tag=EC55989_3897;pseudo=true
NC_011748.1	RefSeq	region	3965159	3966244	.	-	.	ID=id323;Note=fragment of conserved hypothetical protein %28part 1%29%3BEvidence 7 : Gene remnant;Dbxref=GeneID:7145021;gbkey=misc_feature
NC_011748.1	RefSeq	gene	3966263	3966430	.	-	.	ID=gene3970;Name=EC55989_3898;Dbxref=GeneID:7145022;gbkey=Gene;locus_tag=EC55989_3898;pseudo=true
NC_011748.1	RefSeq	region	3966263	3966430	.	-	.	ID=id324;Note=fragment of conserved hypothetical protein %28partial%29%3BEvidence 7 : Gene remnant;Dbxref=GeneID:7145022;gbkey=misc_feature
NC_011748.1	RefSeq	gene	3966629	3967681	.	+	.	ID=gene3971;Name=yhiM;Dbxref=GeneID:7145023;gbkey=Gene;gene=yhiM;locus_tag=EC55989_3899
NC_011748.1	RefSeq	CDS	3966629	3967681	.	+	0	ID=cds3689;Name=YP_002404836.1;Parent=gene3971;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002404836.1,GeneID:7145023;gbkey=CDS;product=inner membrane protein;protein_id=YP_002404836.1;transl_table=11
NC_011748.1	RefSeq	gene	3968341	3968808	.	-	.	ID=gene3972;Name=EC55989_3900;Dbxref=GeneID:7149000;gbkey=Gene;locus_tag=EC55989_3900
NC_011748.1	RefSeq	CDS	3968341	3968808	.	-	0	ID=cds3690;Name=YP_002404837.1;Parent=gene3972;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 8594334%2C 16940062%2C 15518875%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002404837.1,GeneID:7149000;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404837.1;transl_table=11
NC_011748.1	RefSeq	gene	3968993	3970393	.	-	.	ID=gene3973;Name=EC55989_3901;Dbxref=GeneID:7145024;gbkey=Gene;locus_tag=EC55989_3901
NC_011748.1	RefSeq	CDS	3968993	3970393	.	-	0	ID=cds3691;Name=YP_002404838.1;Parent=gene3973;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002404838.1,GeneID:7145024;gbkey=CDS;product=sensor protein pcoS;protein_id=YP_002404838.1;transl_table=11
NC_011748.1	RefSeq	gene	3970390	3971076	.	-	.	ID=gene3974;Name=EC55989_3902;Dbxref=GeneID:7145025;gbkey=Gene;locus_tag=EC55989_3902
NC_011748.1	RefSeq	CDS	3970390	3971076	.	-	0	ID=cds3692;Name=YP_002404839.1;Parent=gene3974;Dbxref=Genbank:YP_002404839.1,GeneID:7145025;gbkey=CDS;product=Transcriptional regulatory protein pcoR;protein_id=YP_002404839.1;transl_table=11
NC_011748.1	RefSeq	gene	3971125	3972054	.	-	.	ID=gene3975;Name=EC55989_3903;Dbxref=GeneID:7145026;gbkey=Gene;locus_tag=EC55989_3903
NC_011748.1	RefSeq	CDS	3971125	3972054	.	-	0	ID=cds3693;Name=YP_002404840.1;Parent=gene3975;Dbxref=Genbank:YP_002404840.1,GeneID:7145026;gbkey=CDS;product=Copper resistance protein D;protein_id=YP_002404840.1;transl_table=11
NC_011748.1	RefSeq	gene	3972059	3972439	.	-	.	ID=gene3976;Name=EC55989_3904;Dbxref=GeneID:7145027;gbkey=Gene;locus_tag=EC55989_3904
NC_011748.1	RefSeq	CDS	3972059	3972439	.	-	0	ID=cds3694;Name=YP_002404841.1;Parent=gene3976;Dbxref=Genbank:YP_002404841.1,GeneID:7145027;gbkey=CDS;product=Copper resistance protein C precursor;protein_id=YP_002404841.1;transl_table=11
NC_011748.1	RefSeq	gene	3972479	3973378	.	-	.	ID=gene3977;Name=EC55989_3905;Dbxref=GeneID:7145028;gbkey=Gene;locus_tag=EC55989_3905
NC_011748.1	RefSeq	CDS	3972479	3973378	.	-	0	ID=cds3695;Name=YP_002404842.1;Parent=gene3977;Dbxref=Genbank:YP_002404842.1,GeneID:7145028;gbkey=CDS;product=Copper resistance protein B precursor;protein_id=YP_002404842.1;transl_table=11
NC_011748.1	RefSeq	gene	3973375	3975198	.	-	.	ID=gene3978;Name=EC55989_3906;Dbxref=GeneID:7145029;gbkey=Gene;locus_tag=EC55989_3906
NC_011748.1	RefSeq	CDS	3973375	3975198	.	-	0	ID=cds3696;Name=YP_002404843.1;Parent=gene3978;Dbxref=Genbank:YP_002404843.1,GeneID:7145029;gbkey=CDS;product=Copper resistance protein A precursor;protein_id=YP_002404843.1;transl_table=11
NC_011748.1	RefSeq	gene	3975427	3975876	.	+	.	ID=gene3979;Name=EC55989_3907;Dbxref=GeneID:7145030;gbkey=Gene;locus_tag=EC55989_3907
NC_011748.1	RefSeq	CDS	3975427	3975876	.	+	0	ID=cds3697;Name=YP_002404844.1;Parent=gene3979;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 8594334%2C 15518875%2C 15276215%2C 16940062;Dbxref=Genbank:YP_002404844.1,GeneID:7145030;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404844.1;transl_table=11
NC_011748.1	RefSeq	gene	3976165	3976902	.	+	.	ID=gene3980;Name=EC55989_3908;Dbxref=GeneID:7145031;gbkey=Gene;locus_tag=EC55989_3908
NC_011748.1	RefSeq	CDS	3976165	3976902	.	+	0	ID=cds3698;Name=YP_002404845.1;Parent=gene3980;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 15518875%2C 15276215%2C 16940062%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002404845.1,GeneID:7145031;gbkey=CDS;product=peptidase;protein_id=YP_002404845.1;transl_table=11
NC_011748.1	RefSeq	gene	3977174	3979621	.	-	.	ID=gene3981;Name=silP;Dbxref=GeneID:7145032;gbkey=Gene;gene=silP;locus_tag=EC55989_3910
NC_011748.1	RefSeq	CDS	3977174	3979621	.	-	0	ID=cds3699;Name=YP_002404846.1;Parent=gene3981;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 9930866%2C 15518875%2C 15276215%2C 16940062%3B Product type pt :  transporter;Dbxref=Genbank:YP_002404846.1,GeneID:7145032;gbkey=CDS;product=cation-transporting P-type ATPase;protein_id=YP_002404846.1;transl_table=11
NC_011748.1	RefSeq	gene	3979748	3980194	.	-	.	ID=gene3982;Name=EC55989_3911;Dbxref=GeneID:7147658;gbkey=Gene;locus_tag=EC55989_3911
NC_011748.1	RefSeq	CDS	3979748	3980194	.	-	0	ID=cds3700;Name=YP_002404847.1;Parent=gene3982;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 9930866%2C 15518875%2C 15276215%2C 16940062;Dbxref=Genbank:YP_002404847.1,GeneID:7147658;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404847.1;transl_table=11
NC_011748.1	RefSeq	gene	3980275	3983421	.	-	.	ID=gene3983;Name=cusA;Dbxref=GeneID:7145033;gbkey=Gene;gene=cusA;locus_tag=EC55989_3912
NC_011748.1	RefSeq	CDS	3980275	3983421	.	-	0	ID=cds3701;Name=YP_002404848.1;Parent=gene3983;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 20461235%2C 21125583%2C 21178899%2C 21450803%2C 11399769%2C 12813074%2C 1711024%2C 7984428%3B Product type t : transporter;Dbxref=Genbank:YP_002404848.1,GeneID:7145033;gbkey=CDS;product=copper%2Fsilver efflux system%2C membrane component;protein_id=YP_002404848.1;transl_table=11
NC_011748.1	RefSeq	gene	3983432	3984724	.	-	.	ID=gene3984;Name=silB;Dbxref=GeneID:7145791;gbkey=Gene;gene=silB;locus_tag=EC55989_3913
NC_011748.1	RefSeq	CDS	3983432	3984724	.	-	0	ID=cds3702;Name=YP_002404849.1;Parent=gene3984;Note=with CusA%2C CusC and CusF is part of a cation efflux system that mediates resistance to copper and silver;Dbxref=Genbank:YP_002404849.1,GeneID:7145791;gbkey=CDS;product=copper%2Fsilver efflux system membrane fusion protein CusB;protein_id=YP_002404849.1;transl_table=11
NC_011748.1	RefSeq	gene	3984838	3985191	.	-	.	ID=gene3985;Name=EC55989_3914;Dbxref=GeneID:7147655;gbkey=Gene;locus_tag=EC55989_3914
NC_011748.1	RefSeq	CDS	3984838	3985191	.	-	0	ID=cds3703;Name=YP_002404850.1;Parent=gene3985;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 9930866%2C 15518875%2C 16940062;Dbxref=Genbank:YP_002404850.1,GeneID:7147655;gbkey=CDS;product=copper-binding protein;protein_id=YP_002404850.1;transl_table=11
NC_011748.1	RefSeq	gene	3985219	3986907	.	-	.	ID=gene3986;Name=silC;Dbxref=GeneID:7145034;gbkey=Gene;gene=silC;locus_tag=EC55989_3915
NC_011748.1	RefSeq	CDS	3985219	3986907	.	-	0	ID=cds3704;Name=YP_002404851.1;Parent=gene3986;Note=with CusA%2C CusB and CusF is part of a cation efflux system that mediates resistance to copper and silver;Dbxref=Genbank:YP_002404851.1,GeneID:7145034;gbkey=CDS;product=copper%2Fsilver efflux system outer membrane protein CusC;protein_id=YP_002404851.1;transl_table=11
NC_011748.1	RefSeq	gene	3986794	3987474	.	+	.	ID=gene3987;Name=cusR;Dbxref=GeneID:7147656;gbkey=Gene;gene=cusR;locus_tag=EC55989_3917
NC_011748.1	RefSeq	CDS	3986794	3987474	.	+	0	ID=cds3705;Name=YP_002404852.1;Parent=gene3987;Note=response regulator in two-component regulatory system with CusS%3B regulates the copper efflux system;Dbxref=Genbank:YP_002404852.1,GeneID:7147656;gbkey=CDS;product=DNA-binding transcriptional activator CusR;protein_id=YP_002404852.1;transl_table=11
NC_011748.1	RefSeq	gene	3987467	3988948	.	+	.	ID=gene3988;Name=EC55989_3918;Dbxref=GeneID:7145796;gbkey=Gene;locus_tag=EC55989_3918
NC_011748.1	RefSeq	CDS	3987467	3988948	.	+	0	ID=cds3706;Name=YP_002404853.1;Parent=gene3988;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B Product type pr :  regulator;Dbxref=Genbank:YP_002404853.1,GeneID:7145796;gbkey=CDS;product=sensor kinase CusS;protein_id=YP_002404853.1;transl_table=11
NC_011748.1	RefSeq	gene	3989076	3989624	.	+	.	ID=gene3989;Name=silE;Dbxref=GeneID:7145035;gbkey=Gene;gene=silE;locus_tag=EC55989_3919
NC_011748.1	RefSeq	CDS	3989076	3989624	.	+	0	ID=cds3707;Name=YP_002404854.1;Parent=gene3989;Note=Evidence 2b : Function of strongly homologous gene%3B PubMedId : 9930866%3B Product type f : factor;Dbxref=Genbank:YP_002404854.1,GeneID:7145035;gbkey=CDS;product=silver-binding protein SilE;protein_id=YP_002404854.1;transl_table=11
NC_011748.1	RefSeq	gene	3989772	3990122	.	+	.	ID=gene3990;Name=EC55989_3920;Dbxref=GeneID:7147657;gbkey=Gene;locus_tag=EC55989_3920
NC_011748.1	RefSeq	CDS	3989772	3990122	.	+	0	ID=cds3708;Name=YP_002404855.1;Parent=gene3990;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 15518875%2C 16940062;Dbxref=Genbank:YP_002404855.1,GeneID:7147657;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404855.1;transl_table=11
NC_011748.1	RefSeq	gene	3990291	3992177	.	-	.	ID=gene3991;Name=EC55989_3921;Dbxref=GeneID:7145036;gbkey=Gene;locus_tag=EC55989_3921
NC_011748.1	RefSeq	CDS	3990291	3992177	.	-	0	ID=cds3709;Name=YP_002404856.1;Parent=gene3991;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 15518875%2C 16940062;Dbxref=Genbank:YP_002404856.1,GeneID:7145036;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404856.1;transl_table=11
NC_011748.1	RefSeq	gene	3992681	3993010	.	-	.	ID=gene3992;Name=EC55989_3922;Dbxref=GeneID:7145037;gbkey=Gene;locus_tag=EC55989_3922
NC_011748.1	RefSeq	CDS	3992681	3993010	.	-	0	ID=cds3710;Name=YP_002404857.1;Parent=gene3992;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 15518875%2C 16940062%3B Product type pr :  regulator;Dbxref=Genbank:YP_002404857.1,GeneID:7145037;gbkey=CDS;product=transcriptional regulator;protein_id=YP_002404857.1;transl_table=11
NC_011748.1	RefSeq	gene	3993333	3994259	.	-	.	ID=gene3993;Name=EC55989_3923;Dbxref=GeneID:7145038;gbkey=Gene;locus_tag=EC55989_3923
NC_011748.1	RefSeq	CDS	3993333	3994259	.	-	0	ID=cds3711;Name=YP_002404858.1;Parent=gene3993;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 15518875%2C 16940062;Dbxref=Genbank:YP_002404858.1,GeneID:7145038;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404858.1;transl_table=11
NC_011748.1	RefSeq	gene	3995125	3995400	.	+	.	ID=gene3994;Name=EC55989_3924;Dbxref=GeneID:7145039;gbkey=Gene;locus_tag=EC55989_3924
NC_011748.1	RefSeq	CDS	3995125	3995400	.	+	0	ID=cds3712;Name=YP_002404859.1;Parent=gene3994;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 1849492%3B Product type r : regulator;Dbxref=Genbank:YP_002404859.1,GeneID:7145039;gbkey=CDS;product=Insertion element IS1 protein InsA;protein_id=YP_002404859.1;transl_table=11
NC_011748.1	RefSeq	gene	3995319	3995822	.	+	.	ID=gene3995;Name=EC55989_3925;Dbxref=GeneID:7145040;gbkey=Gene;locus_tag=EC55989_3925
NC_011748.1	RefSeq	CDS	3995319	3995822	.	+	0	ID=cds3713;Name=YP_002404860.1;Parent=gene3995;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 273224%2C 375010%2C 1849492%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002404860.1,GeneID:7145040;gbkey=CDS;product=Insertion element IS1 1%2F5%2F6 protein InsB;protein_id=YP_002404860.1;transl_table=11
NC_011748.1	RefSeq	gene	3995816	3996613	.	-	.	ID=gene3996;Name=EC55989_3926;Dbxref=GeneID:7145041;gbkey=Gene;locus_tag=EC55989_3926
NC_011748.1	RefSeq	CDS	3995816	3996613	.	-	0	ID=cds3714;Name=YP_002404861.1;Parent=gene3996;Note=Evidence 7 : Gene remnant%3B PubMedId : 2156235%2C 1655576%2C 8947057;Dbxref=Genbank:YP_002404861.1,GeneID:7145041;gbkey=CDS;product=hypothetical protein%2C Tn7-like transposition protein TnsD %28fragment%29;protein_id=YP_002404861.1;transl_table=11
NC_011748.1	RefSeq	gene	3996645	3998093	.	-	.	ID=gene3997;Name=EC55989_3927;Dbxref=GeneID:7145042;gbkey=Gene;locus_tag=EC55989_3927
NC_011748.1	RefSeq	CDS	3996645	3998093	.	-	0	ID=cds3715;Name=YP_002404862.1;Parent=gene3997;Note=Evidence 2b : Function of strongly homologous gene%3B PubMedId : 2156235%2C 1655576%2C 8947057%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002404862.1,GeneID:7145042;gbkey=CDS;product=Tn7-like transposition protein TnsC;protein_id=YP_002404862.1;transl_table=11
NC_011748.1	RefSeq	gene	3998093	4000216	.	-	.	ID=gene3998;Name=EC55989_3928;Dbxref=GeneID:7145043;gbkey=Gene;locus_tag=EC55989_3928
NC_011748.1	RefSeq	CDS	3998093	4000216	.	-	0	ID=cds3716;Name=YP_002404863.1;Parent=gene3998;Note=Evidence 2b : Function of strongly homologous gene%3B PubMedId : 2156235%2C 1655576%2C 8947057%2C 10704304%2C 1657979%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002404863.1,GeneID:7145043;gbkey=CDS;product=Tn7-like transposition protein TnsB;protein_id=YP_002404863.1;transl_table=11
NC_011748.1	RefSeq	gene	4000203	4001045	.	-	.	ID=gene3999;Name=EC55989_3929;Dbxref=GeneID:7145044;gbkey=Gene;locus_tag=EC55989_3929
NC_011748.1	RefSeq	CDS	4000203	4001045	.	-	0	ID=cds3717;Name=YP_002404864.1;Parent=gene3999;Note=Evidence 2b : Function of strongly homologous gene%3B PubMedId : 2156235%2C 1655576%2C 8947057%2C 10704304%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002404864.1,GeneID:7145044;gbkey=CDS;product=Tn7-like transposase TnsA;protein_id=YP_002404864.1;transl_table=11
NC_011748.1	RefSeq	gene	4001188	4002390	.	-	.	ID=gene4000;Name=yhiN;Dbxref=GeneID:7145045;gbkey=Gene;gene=yhiN;locus_tag=EC55989_3930
NC_011748.1	RefSeq	CDS	4001188	4002390	.	-	0	ID=cds3718;Name=YP_002404865.1;Parent=gene4000;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002404865.1,GeneID:7145045;gbkey=CDS;product=oxidoreductase with FAD%2FNAD%28P%29-binding domain;protein_id=YP_002404865.1;transl_table=11
NC_011748.1	RefSeq	gene	4002622	4004121	.	+	.	ID=gene4001;Name=pitA;Dbxref=GeneID:7149001;gbkey=Gene;gene=pitA;locus_tag=EC55989_3931
NC_011748.1	RefSeq	CDS	4002622	4004121	.	+	0	ID=cds3719;Name=YP_002404866.1;Parent=gene4001;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 87014120%3B Product type t : transporter;Dbxref=Genbank:YP_002404866.1,GeneID:7149001;gbkey=CDS;product=phosphate transporter%2C low-affinity;protein_id=YP_002404866.1;transl_table=11
NC_011748.1	RefSeq	gene	4004192	4004527	.	-	.	ID=gene4002;Name=yhiO;Dbxref=GeneID:7147191;gbkey=Gene;gene=yhiO;locus_tag=EC55989_3932
NC_011748.1	RefSeq	CDS	4004192	4004527	.	-	0	ID=cds3720;Name=YP_002404867.1;Parent=gene4002;Note=ppGpp-dependent%2C membrane associated%2C stress protein produced under conditions of nutrient deprivation%2C osmotic shock and oxidative stress;Dbxref=Genbank:YP_002404867.1,GeneID:7147191;gbkey=CDS;product=universal stress protein UspB;protein_id=YP_002404867.1;transl_table=11
NC_011748.1	RefSeq	gene	4004918	4005352	.	+	.	ID=gene4003;Name=uspA;Dbxref=GeneID:7149002;gbkey=Gene;gene=uspA;locus_tag=EC55989_3933
NC_011748.1	RefSeq	CDS	4004918	4005352	.	+	0	ID=cds3721;Name=YP_002404868.1;Parent=gene4003;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 12732303%2C 93086426%2C 93308072%2C 94203056%2C 10499297%2C 10652104%2C 10931298%2C 11157932%2C 1453957%2C 8506346%2C 8932299%2C 9298646%2C 9405142%3B Product type f : factor;Dbxref=Genbank:YP_002404868.1,GeneID:7149002;gbkey=CDS;product=universal stress global response regulator;protein_id=YP_002404868.1;transl_table=11
NC_011748.1	RefSeq	gene	4005670	4007139	.	+	.	ID=gene4004;Name=yhiP;Dbxref=GeneID:7147928;gbkey=Gene;gene=yhiP;locus_tag=EC55989_3934
NC_011748.1	RefSeq	CDS	4005670	4007139	.	+	0	ID=cds3722;Name=YP_002404869.1;Parent=gene4004;Note=member of the POT family of peptide transporters%3B probable proton-dependent peptide transporter function;Dbxref=Genbank:YP_002404869.1,GeneID:7147928;gbkey=CDS;product=inner membrane transporter YhiP;protein_id=YP_002404869.1;transl_table=11
NC_011748.1	RefSeq	gene	4007188	4007940	.	-	.	ID=gene4005;Name=yhiQ;Dbxref=GeneID:7149003;gbkey=Gene;gene=yhiQ;locus_tag=EC55989_3935
NC_011748.1	RefSeq	CDS	4007188	4007940	.	-	0	ID=cds3723;Name=YP_002404870.1;Parent=gene4005;Note=predicted SAM-dependent methyltransferase;Dbxref=Genbank:YP_002404870.1,GeneID:7149003;gbkey=CDS;product=methyltransferase;protein_id=YP_002404870.1;transl_table=11
NC_011748.1	RefSeq	gene	4007948	4009990	.	-	.	ID=gene4006;Name=prlC;Dbxref=GeneID:7149004;gbkey=Gene;gene=prlC;locus_tag=EC55989_3936
NC_011748.1	RefSeq	CDS	4007948	4009990	.	-	0	ID=cds3724;Name=YP_002404871.1;Parent=gene4006;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 92394891%2C 1325967%2C 8366062%3B Product type e : enzyme;Dbxref=Genbank:YP_002404871.1,GeneID:7149004;gbkey=CDS;product=oligopeptidase A;protein_id=YP_002404871.1;transl_table=11
NC_011748.1	RefSeq	gene	4010193	4011035	.	+	.	ID=gene4007;Name=yhiR;Dbxref=GeneID:7147248;gbkey=Gene;gene=yhiR;locus_tag=EC55989_3937
NC_011748.1	RefSeq	CDS	4010193	4011035	.	+	0	ID=cds3725;Name=YP_002404872.1;Parent=gene4007;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 11591672%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002404872.1,GeneID:7147248;gbkey=CDS;product=DNA %28exogenous%29 processing protein;protein_id=YP_002404872.1;transl_table=11
NC_011748.1	RefSeq	gene	4011107	4012459	.	+	.	ID=gene4008;Name=gor;Dbxref=GeneID:7149005;gbkey=Gene;gene=gor;locus_tag=EC55989_3938
NC_011748.1	RefSeq	CDS	4011107	4012459	.	+	0	ID=cds3726;Name=YP_002404873.1;Parent=gene4008;Note=catalyzes the reduction of 2 glutathione to glutathione disulfide%3B maintains high levels of reduced glutathione in the cytosol%3B involved in redox regulation and oxidative defense;Dbxref=Genbank:YP_002404873.1,GeneID:7149005;gbkey=CDS;product=glutathione reductase;protein_id=YP_002404873.1;transl_table=11
NC_011748.1	RefSeq	gene	4012513	4012662	.	-	.	ID=gene4009;Name=EC55989_3939;Dbxref=GeneID:7146356;gbkey=Gene;locus_tag=EC55989_3939
NC_011748.1	RefSeq	CDS	4012513	4012662	.	-	0	ID=cds3727;Name=YP_002404874.1;Parent=gene4009;Note=Evidence 6 : Doubtful CDS;Dbxref=Genbank:YP_002404874.1,GeneID:7146356;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404874.1;transl_table=11
NC_011748.1	RefSeq	gene	4012618	4012797	.	+	.	ID=gene4010;Name=EC55989_3940;Dbxref=GeneID:7145046;gbkey=Gene;locus_tag=EC55989_3940
NC_011748.1	RefSeq	CDS	4012618	4012797	.	+	0	ID=cds3728;Name=YP_002404875.1;Parent=gene4010;Note=Evidence 6 : Doubtful CDS;Dbxref=Genbank:YP_002404875.1,GeneID:7145046;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404875.1;transl_table=11
NC_011748.1	RefSeq	gene	4013336	4013689	.	+	.	ID=gene4011;Name=arsR;Dbxref=GeneID:7145047;gbkey=Gene;gene=arsR;locus_tag=EC55989_3942
NC_011748.1	RefSeq	CDS	4013336	4013689	.	+	0	ID=cds3729;Name=YP_002404876.1;Parent=gene4011;Note=regulates the expression of of the arsRBC involved in resistance to arsenic;Dbxref=Genbank:YP_002404876.1,GeneID:7145047;gbkey=CDS;product=DNA-binding transcriptional repressor ArsR;protein_id=YP_002404876.1;transl_table=11
NC_011748.1	RefSeq	gene	4013743	4015032	.	+	.	ID=gene4012;Name=arsB;Dbxref=GeneID:7145554;gbkey=Gene;gene=arsB;locus_tag=EC55989_3943
NC_011748.1	RefSeq	CDS	4013743	4015032	.	+	0	ID=cds3730;Name=YP_002404877.1;Parent=gene4012;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 15004242%2C 95355341%2C 1535622%2C 7721697%3B Product type t : transporter;Dbxref=Genbank:YP_002404877.1,GeneID:7145554;gbkey=CDS;product=arsenite%2Fantimonite transporter;protein_id=YP_002404877.1;transl_table=11
NC_011748.1	RefSeq	gene	4015045	4015470	.	+	.	ID=gene4013;Name=arsC;Dbxref=GeneID:7145552;gbkey=Gene;gene=arsC;locus_tag=EC55989_3944
NC_011748.1	RefSeq	CDS	4015045	4015470	.	+	0	ID=cds3731;Name=YP_002404878.1;Parent=gene4013;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 95355341%2C 7721697%3B Product type e : enzyme;Dbxref=Genbank:YP_002404878.1,GeneID:7145552;gbkey=CDS;product=arsenate reductase;protein_id=YP_002404878.1;transl_table=11
NC_011748.1	RefSeq	gene	4015604	4015900	.	-	.	ID=gene4014;Name=EC55989_3945;Dbxref=GeneID:7145553;gbkey=Gene;locus_tag=EC55989_3945
NC_011748.1	RefSeq	CDS	4015604	4015900	.	-	0	ID=cds3732;Name=YP_002404879.1;Parent=gene4014;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404879.1,GeneID:7145553;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404879.1;transl_table=11
NC_011748.1	RefSeq	gene	4015995	4017020	.	+	.	ID=gene4015;Name=EC55989_3946;Dbxref=GeneID:7145048;gbkey=Gene;locus_tag=EC55989_3946
NC_011748.1	RefSeq	CDS	4015995	4017020	.	+	0	ID=cds3733;Name=YP_002404880.1;Parent=gene4015;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002404880.1,GeneID:7145048;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404880.1;transl_table=11
NC_011748.1	RefSeq	gene	4017600	4018745	.	+	.	ID=gene4016;Name=EC55989_3947;Dbxref=GeneID:7145049;gbkey=Gene;locus_tag=EC55989_3947
NC_011748.1	RefSeq	CDS	4017600	4018745	.	+	0	ID=cds3734;Name=YP_002404881.1;Parent=gene4016;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404881.1,GeneID:7145049;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404881.1;transl_table=11
NC_011748.1	RefSeq	gene	4019069	4019635	.	+	.	ID=gene4017;Name=slp;Dbxref=GeneID:7145050;gbkey=Gene;gene=slp;locus_tag=EC55989_3948
NC_011748.1	RefSeq	CDS	4019069	4019635	.	+	0	ID=cds3735;Name=YP_002404882.1;Parent=gene4017;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 94293775%2C 8022277%3B Product type lp : lipoprotein;Dbxref=Genbank:YP_002404882.1,GeneID:7145050;gbkey=CDS;product=outer membrane lipoprotein;protein_id=YP_002404882.1;transl_table=11
NC_011748.1	RefSeq	gene	4019791	4020321	.	+	.	ID=gene4018;Name=yhiF;Dbxref=GeneID:7147660;gbkey=Gene;gene=yhiF;locus_tag=EC55989_3950
NC_011748.1	RefSeq	CDS	4019791	4020321	.	+	0	ID=cds3736;Name=YP_002404883.1;Parent=gene4018;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 8022277%3B Product type pr :  regulator;Dbxref=Genbank:YP_002404883.1,GeneID:7147660;gbkey=CDS;product=DNA-binding transcriptional regulator;protein_id=YP_002404883.1;transl_table=11
NC_011748.1	RefSeq	gene	4020363	4021010	.	-	.	ID=gene4019;Name=yhiD;Dbxref=GeneID:7148996;gbkey=Gene;gene=yhiD;locus_tag=EC55989_3951
NC_011748.1	RefSeq	CDS	4020363	4021010	.	-	0	ID=cds3737;Name=YP_002404884.1;Parent=gene4019;Note=inner membrane protein involved in cell density-dependent acid resistance%3B part of the acid fitness island %28AFI%29 of E. coli;Dbxref=Genbank:YP_002404884.1,GeneID:7148996;gbkey=CDS;product=Mg%282%2B%29 transport ATPase;protein_id=YP_002404884.1;transl_table=11
NC_011748.1	RefSeq	gene	4021074	4021400	.	-	.	ID=gene4020;Name=hdeB;Dbxref=GeneID:7148995;gbkey=Gene;gene=hdeB;locus_tag=EC55989_3952
NC_011748.1	RefSeq	CDS	4021074	4021400	.	-	0	ID=cds3738;Name=YP_002404885.1;Parent=gene4020;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 94064579%2C 8885264%2C 12071744%2C 8244952%2C 8455549%2C 9298646%2C 9868784%3B Product type pf :  factor;Dbxref=Genbank:YP_002404885.1,GeneID:7148995;gbkey=CDS;product=acid-resistance protein;protein_id=YP_002404885.1;transl_table=11
NC_011748.1	RefSeq	gene	4021516	4021848	.	-	.	ID=gene4021;Name=hdeA;Dbxref=GeneID:7146402;gbkey=Gene;gene=hdeA;locus_tag=EC55989_3953
NC_011748.1	RefSeq	CDS	4021516	4021848	.	-	0	ID=cds3739;Name=YP_002404886.1;Parent=gene4021;Note=inactive form;Dbxref=Genbank:YP_002404886.1,GeneID:7146402;gbkey=CDS;product=acid-resistance protein;protein_id=YP_002404886.1;transl_table=11
NC_011748.1	RefSeq	gene	4022103	4022675	.	+	.	ID=gene4022;Name=hdeD;Dbxref=GeneID:7146401;gbkey=Gene;gene=hdeD;locus_tag=EC55989_3954
NC_011748.1	RefSeq	CDS	4022103	4022675	.	+	0	ID=cds3740;Name=YP_002404887.1;Parent=gene4022;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 94064579%2C 8244952%2C 8455549%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002404887.1,GeneID:7146401;gbkey=CDS;product=acid-resistance membrane protein;protein_id=YP_002404887.1;transl_table=11
NC_011748.1	RefSeq	gene	4023474	4024001	.	+	.	ID=gene4023;Name=gadE;Dbxref=GeneID:7146403;gbkey=Gene;gene=gadE;locus_tag=EC55989_3955
NC_011748.1	RefSeq	CDS	4023474	4024001	.	+	0	ID=cds3741;Name=YP_002404888.1;Parent=gene4023;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 12399493%2C 12940989%2C 14702398%3B Product type r : regulator;Dbxref=Genbank:YP_002404888.1,GeneID:7146403;gbkey=CDS;product=DNA-binding transcriptional activator;protein_id=YP_002404888.1;transl_table=11
NC_011748.1	RefSeq	gene	4024340	4025497	.	+	.	ID=gene4024;Name=mdtE;Dbxref=GeneID:7146243;gbkey=Gene;gene=mdtE;locus_tag=EC55989_3957
NC_011748.1	RefSeq	CDS	4024340	4025497	.	+	0	ID=cds3742;Name=YP_002404889.1;Parent=gene4024;Note=with MdtF and tolC is involved in resistance to rhodamine 6G%2C erythromycin%2C doxorubicin and other compounds;Dbxref=Genbank:YP_002404889.1,GeneID:7146243;gbkey=CDS;product=multidrug efflux system protein MdtE;protein_id=YP_002404889.1;transl_table=11
NC_011748.1	RefSeq	gene	4025522	4028635	.	+	.	ID=gene4025;Name=mdtF;Dbxref=GeneID:7146806;gbkey=Gene;gene=mdtF;locus_tag=EC55989_3958
NC_011748.1	RefSeq	CDS	4025522	4028635	.	+	0	ID=cds3743;Name=YP_002404890.1;Parent=gene4025;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 21450803%3B Product type t : transporter;Dbxref=Genbank:YP_002404890.1,GeneID:7146806;gbkey=CDS;product=multidrug transporter%2C RpoS-dependent;protein_id=YP_002404890.1;transl_table=11
NC_011748.1	RefSeq	gene	4028998	4029726	.	-	.	ID=gene4026;Name=gadW;Dbxref=GeneID:7146807;gbkey=Gene;gene=gadW;locus_tag=EC55989_3960
NC_011748.1	RefSeq	CDS	4028998	4029726	.	-	0	ID=cds3744;Name=YP_002404891.1;Parent=gene4026;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 12446650%3B Product type r : regulator;Dbxref=Genbank:YP_002404891.1,GeneID:7146807;gbkey=CDS;product=DNA-binding transcriptional activator;protein_id=YP_002404891.1;transl_table=11
NC_011748.1	RefSeq	gene	4029972	4030076	.	+	.	ID=gene4027;Name=gadY;Dbxref=GeneID:7146244;gbkey=Gene;gene=gadY;locus_tag=EC55989_misc_RNA_88
NC_011748.1	RefSeq	transcript	4029972	4030076	.	+	.	ID=rna165;Parent=gene4027;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 15466020%3B Product type n : RNA;Dbxref=GeneID:7146244;gbkey=misc_RNA;product=GadY
NC_011748.1	RefSeq	exon	4029972	4030076	.	+	.	ID=id325;Parent=rna165;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 15466020%3B Product type n : RNA;Dbxref=GeneID:7146244;gbkey=misc_RNA;product=GadY
NC_011748.1	RefSeq	gene	4030094	4030918	.	-	.	ID=gene4028;Name=gadX;Dbxref=GeneID:7146246;gbkey=Gene;gene=gadX;locus_tag=EC55989_3961
NC_011748.1	RefSeq	CDS	4030094	4030918	.	-	0	ID=cds3745;Name=YP_002404892.1;Parent=gene4028;Note=regulates genes in response to acid and%2For during stationary phase;Dbxref=Genbank:YP_002404892.1,GeneID:7146246;gbkey=CDS;product=DNA-binding transcriptional regulator GadX;protein_id=YP_002404892.1;transl_table=11
NC_011748.1	RefSeq	gene	4031288	4032688	.	-	.	ID=gene4029;Name=gadA;Dbxref=GeneID:7146245;gbkey=Gene;gene=gadA;locus_tag=EC55989_3962
NC_011748.1	RefSeq	CDS	4031288	4032688	.	-	0	ID=cds3746;Name=YP_002404893.1;Parent=gene4029;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 92155241%2C 92394884%2C 99406302%2C 1522060%2C 1740158%2C 7764225%2C 9298646%3B Product type e : enzyme;Dbxref=Genbank:YP_002404893.1,GeneID:7146245;gbkey=CDS;product=glutamate decarboxylase;protein_id=YP_002404893.1;transl_table=11
NC_011748.1	RefSeq	gene	4032899	4034296	.	-	.	ID=gene4030;Name=yhjA;Dbxref=GeneID:7146240;gbkey=Gene;gene=yhjA;locus_tag=EC55989_3963
NC_011748.1	RefSeq	CDS	4032899	4034296	.	-	0	ID=cds3747;Name=YP_002404894.1;Parent=gene4030;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 8163487%2C 14563563%3B Product type e : enzyme;Dbxref=Genbank:YP_002404894.1,GeneID:7146240;gbkey=CDS;product=cytochrome C peroxidase %28cpp-like%29;protein_id=YP_002404894.1;transl_table=11
NC_011748.1	RefSeq	gene	4034701	4036350	.	+	.	ID=gene4031;Name=treF;Dbxref=GeneID:7149006;gbkey=Gene;gene=treF;locus_tag=EC55989_3964
NC_011748.1	RefSeq	CDS	4034701	4036350	.	+	0	ID=cds3748;Name=YP_002404895.1;Parent=gene4031;Note=cytoplasmic%3B catalyzes the hydrolysis of trehalose to glucose;Dbxref=Genbank:YP_002404895.1,GeneID:7149006;gbkey=CDS;product=trehalase;protein_id=YP_002404895.1;transl_table=11
NC_011748.1	RefSeq	gene	4036401	4037003	.	-	.	ID=gene4032;Name=yhjB;Dbxref=GeneID:7147838;gbkey=Gene;gene=yhjB;locus_tag=EC55989_3965
NC_011748.1	RefSeq	CDS	4036401	4037003	.	-	0	ID=cds3749;Name=YP_002404896.1;Parent=gene4032;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pr :  regulator;Dbxref=Genbank:YP_002404896.1,GeneID:7147838;gbkey=CDS;product=DNA-binding response regulator in two-component regulatory system;protein_id=YP_002404896.1;transl_table=11
NC_011748.1	RefSeq	gene	4037451	4038422	.	+	.	ID=gene4033;Name=yhjC;Dbxref=GeneID:7149007;gbkey=Gene;gene=yhjC;locus_tag=EC55989_3967
NC_011748.1	RefSeq	CDS	4037451	4038422	.	+	0	ID=cds3750;Name=YP_002404897.1;Parent=gene4033;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pr :  regulator;Dbxref=Genbank:YP_002404897.1,GeneID:7149007;gbkey=CDS;product=DNA-binding transcriptional regulator;protein_id=YP_002404897.1;transl_table=11
NC_011748.1	RefSeq	gene	4038471	4039484	.	+	.	ID=gene4034;Name=yhjD;Dbxref=GeneID:7149008;gbkey=Gene;gene=yhjD;locus_tag=EC55989_3968
NC_011748.1	RefSeq	CDS	4038471	4039484	.	+	0	ID=cds3751;Name=YP_002404898.1;Parent=gene4034;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002404898.1,GeneID:7149008;gbkey=CDS;product=inner membrane protein;protein_id=YP_002404898.1;transl_table=11
NC_011748.1	RefSeq	gene	4039895	4041217	.	+	.	ID=gene4035;Name=yhjE;Dbxref=GeneID:7149009;gbkey=Gene;gene=yhjE;locus_tag=EC55989_3969
NC_011748.1	RefSeq	CDS	4039895	4041217	.	+	0	ID=cds3752;Name=YP_002404899.1;Parent=gene4035;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002404899.1,GeneID:7149009;gbkey=CDS;product=transporter;protein_id=YP_002404899.1;transl_table=11
NC_011748.1	RefSeq	gene	4041451	4043526	.	-	.	ID=gene4036;Name=yhjG;Dbxref=GeneID:7149010;gbkey=Gene;gene=yhjG;locus_tag=EC55989_3970
NC_011748.1	RefSeq	CDS	4041451	4043526	.	-	0	ID=cds3753;Name=YP_002404900.1;Parent=gene4036;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002404900.1,GeneID:7149010;gbkey=CDS;product=outer membrane biogenesis protein;protein_id=YP_002404900.1;transl_table=11
NC_011748.1	RefSeq	gene	4043581	4044348	.	-	.	ID=gene4037;Name=yhjH;Dbxref=GeneID:7149011;gbkey=Gene;gene=yhjH;locus_tag=EC55989_3971
NC_011748.1	RefSeq	CDS	4043581	4044348	.	-	0	ID=cds3754;Name=YP_002404901.1;Parent=gene4037;Note=in Escherichia coli this protein is involved in flagellar function;Dbxref=Genbank:YP_002404901.1,GeneID:7149011;gbkey=CDS;product=EAL domain-containing protein;protein_id=YP_002404901.1;transl_table=11
NC_011748.1	RefSeq	gene	4044302	4044496	.	+	.	ID=gene4038;Name=EC55989_3972;Dbxref=GeneID:7149012;gbkey=Gene;locus_tag=EC55989_3972
NC_011748.1	RefSeq	CDS	4044302	4044496	.	+	0	ID=cds3755;Name=YP_002404902.1;Parent=gene4038;Note=Evidence 6 : Doubtful CDS;Dbxref=Genbank:YP_002404902.1,GeneID:7149012;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404902.1;transl_table=11
NC_011748.1	RefSeq	gene	4044580	4045509	.	+	.	ID=gene4039;Name=kdgK;Dbxref=GeneID:7145051;gbkey=Gene;gene=kdgK;locus_tag=EC55989_3973
NC_011748.1	RefSeq	CDS	4044580	4045509	.	+	0	ID=cds3756;Name=YP_002404903.1;Parent=gene4039;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 4359651%2C 13813474%3B Product type e : enzyme;Dbxref=Genbank:YP_002404903.1,GeneID:7145051;gbkey=CDS;product=ketodeoxygluconokinase;protein_id=YP_002404903.1;transl_table=11
NC_011748.1	RefSeq	gene	4045605	4047101	.	-	.	ID=gene4040;Name=yhjJ;Dbxref=GeneID:7146651;gbkey=Gene;gene=yhjJ;locus_tag=EC55989_3974
NC_011748.1	RefSeq	CDS	4045605	4047101	.	-	0	ID=cds3757;Name=YP_002404904.1;Parent=gene4040;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 9298646%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002404904.1,GeneID:7146651;gbkey=CDS;product=zinc-dependent peptidase;protein_id=YP_002404904.1;transl_table=11
NC_011748.1	RefSeq	gene	4047322	4048608	.	-	.	ID=gene4041;Name=dctA;Dbxref=GeneID:7149013;gbkey=Gene;gene=dctA;locus_tag=EC55989_3975
NC_011748.1	RefSeq	CDS	4047322	4048608	.	-	0	ID=cds3758;Name=YP_002404905.1;Parent=gene4041;Note=involved in the transport of C4-dicarboxylates across the membrane;Dbxref=Genbank:YP_002404905.1,GeneID:7149013;gbkey=CDS;product=C4-dicarboxylate transporter DctA;protein_id=YP_002404905.1;transl_table=11
NC_011748.1	RefSeq	gene	4048791	4050740	.	-	.	ID=gene4042;Name=yhjK;Dbxref=GeneID:7145859;gbkey=Gene;gene=yhjK;locus_tag=EC55989_3976
NC_011748.1	RefSeq	CDS	4048791	4050740	.	-	0	ID=cds3759;Name=YP_002404906.1;Parent=gene4042;Note=HmsP in Yersinia pestis plays a role in invasion of epithelial cells%3B the EAL-domain portion of HmsP from Y. pestis shows phosphodiesterase activity which is required for the inhibition of biofilm formation%3B inner membrane protein%3B similar to a  phosphodiesterase protein from E. coli;Dbxref=Genbank:YP_002404906.1,GeneID:7145859;gbkey=CDS;product=phosphodiesterase;protein_id=YP_002404906.1;transl_table=11
NC_011748.1	RefSeq	STS	4049177	4050870	.	+	.	ID=id326;Dbxref=UniSTS:474277;gbkey=STS
NC_011748.1	RefSeq	gene	4050861	4054334	.	-	.	ID=gene4043;Name=bcsC;Dbxref=GeneID:7149014;gbkey=Gene;gene=bcsC;locus_tag=EC55989_3977
NC_011748.1	RefSeq	CDS	4050861	4054334	.	-	0	ID=cds3760;Name=YP_002404907.1;Parent=gene4043;Note=cellulose is produced by the multicellular morphotypes of E. coli and Salmonella typhimurium%3B the cellulose biosynthesis genes bcsA%2C bcsB%2C bcsZ and bcsC are constitutively transcribed%2C however%2C cellulose synthesis is dependent on the expression of adrA;Dbxref=Genbank:YP_002404907.1,GeneID:7149014;gbkey=CDS;product=cellulose synthase subunit BcsC;protein_id=YP_002404907.1;transl_table=11
NC_011748.1	RefSeq	gene	4054316	4055422	.	-	.	ID=gene4044;Name=bcsZ;Dbxref=GeneID:7145604;gbkey=Gene;gene=bcsZ;locus_tag=EC55989_3978
NC_011748.1	RefSeq	CDS	4054316	4055422	.	-	0	ID=cds3761;Name=YP_002404908.1;Parent=gene4044;Note=catalyzes the hydrolysis of 1%2C4-beta-D-glucosidic linkages in cellulose%2C lichenin and cereal beta-D-glucans;Dbxref=Genbank:YP_002404908.1,GeneID:7145604;gbkey=CDS;product=endo-1%2C4-D-glucanase;protein_id=YP_002404908.1;transl_table=11
NC_011748.1	RefSeq	gene	4055429	4057768	.	-	.	ID=gene4045;Name=bcsB;Dbxref=GeneID:7145608;gbkey=Gene;gene=bcsB;locus_tag=EC55989_3979
NC_011748.1	RefSeq	CDS	4055429	4057768	.	-	0	ID=cds3762;Name=YP_002404909.1;Parent=gene4045;Note=binds the cellulose synthase activator%2C bis-%283%27-5%27%29 cyclic diguanylic acid %28c-di-GMP%29;Dbxref=Genbank:YP_002404909.1,GeneID:7145608;gbkey=CDS;product=cellulose synthase regulator protein;protein_id=YP_002404909.1;transl_table=11
NC_011748.1	RefSeq	gene	4057779	4060397	.	-	.	ID=gene4046;Name=bcsA;Dbxref=GeneID:7145603;gbkey=Gene;gene=bcsA;locus_tag=EC55989_3980
NC_011748.1	RefSeq	CDS	4057779	4060397	.	-	0	ID=cds3763;Name=YP_002404910.1;Parent=gene4046;Note=polymerizes uridine 5%27-diphosphate glucose to cellulose%3B acts with BcsB%2C BcsZ and BcsC in cellulose biosynthesis;Dbxref=Genbank:YP_002404910.1,GeneID:7145603;gbkey=CDS;product=cellulose synthase catalytic subunit;protein_id=YP_002404910.1;transl_table=11
NC_011748.1	RefSeq	gene	4060394	4061146	.	-	.	ID=gene4047;Name=EC55989_3981;Dbxref=GeneID:7145602;gbkey=Gene;locus_tag=EC55989_3981
NC_011748.1	RefSeq	CDS	4060394	4061146	.	-	0	ID=cds3764;Name=YP_002404911.1;Parent=gene4047;Dbxref=Genbank:YP_002404911.1,GeneID:7145602;gbkey=CDS;product=cell division protein;protein_id=YP_002404911.1;transl_table=11
NC_011748.1	RefSeq	gene	4061158	4061346	.	-	.	ID=gene4048;Name=yhjR;Dbxref=GeneID:7145052;gbkey=Gene;gene=yhjR;locus_tag=EC55989_3982
NC_011748.1	RefSeq	CDS	4061158	4061346	.	-	0	ID=cds3765;Name=YP_002404912.1;Parent=gene4048;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404912.1,GeneID:7145052;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404912.1;transl_table=11
NC_011748.1	RefSeq	gene	4061619	4063190	.	+	.	ID=gene4049;Name=bcsE;Dbxref=GeneID:7149015;gbkey=Gene;gene=bcsE;locus_tag=EC55989_3983
NC_011748.1	RefSeq	CDS	4061619	4063190	.	+	0	ID=cds3766;Name=YP_002404913.1;Parent=gene4049;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 11929533%2C 11260463%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002404913.1,GeneID:7149015;gbkey=CDS;product=cellulose biosynthesis protease;protein_id=YP_002404913.1;transl_table=11
NC_011748.1	RefSeq	gene	4063187	4063378	.	+	.	ID=gene4050;Name=bcsF;Dbxref=GeneID:7145605;gbkey=Gene;gene=bcsF;locus_tag=EC55989_3984
NC_011748.1	RefSeq	CDS	4063187	4063378	.	+	0	ID=cds3767;Name=YP_002404914.1;Parent=gene4050;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404914.1,GeneID:7145605;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404914.1;transl_table=11
NC_011748.1	RefSeq	gene	4063375	4065054	.	+	.	ID=gene4051;Name=bcsG;Dbxref=GeneID:7145606;gbkey=Gene;gene=bcsG;locus_tag=EC55989_3985
NC_011748.1	RefSeq	CDS	4063375	4065054	.	+	0	ID=cds3768;Name=YP_002404915.1;Parent=gene4051;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 11929533%2C 11260463%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002404915.1,GeneID:7145606;gbkey=CDS;product=cellulose biosynthesis endoglucanase;protein_id=YP_002404915.1;transl_table=11
NC_011748.1	RefSeq	gene	4065141	4065308	.	-	.	ID=gene4052;Name=ldrD;Dbxref=GeneID:7145607;gbkey=Gene;gene=ldrD;locus_tag=EC55989_3986;pseudo=true
NC_011748.1	RefSeq	region	4065141	4065308	.	-	.	ID=id327;Note=fragment of toxic polypeptide%2C small %28partial%29%3BEvidence 7 : Gene remnant%3B Product type f : factor;Dbxref=GeneID:7145607;gbkey=misc_feature
NC_011748.1	RefSeq	gene	4065297	4065360	.	+	.	ID=gene4053;Name=rdlD;Dbxref=GeneID:7146685;gbkey=Gene;gene=rdlD;locus_tag=EC55989_misc_RNA_89
NC_011748.1	RefSeq	transcript	4065297	4065360	.	+	.	ID=rna166;Parent=gene4053;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 12123448%3B Product type n : RNA;Dbxref=GeneID:7146685;gbkey=misc_RNA;product=RdlD
NC_011748.1	RefSeq	exon	4065297	4065360	.	+	.	ID=id328;Parent=rna166;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 12123448%3B Product type n : RNA;Dbxref=GeneID:7146685;gbkey=misc_RNA;product=RdlD
NC_011748.1	RefSeq	gene	4066107	4066349	.	-	.	ID=gene4054;Name=ldrD;Dbxref=GeneID:7147356;gbkey=Gene;gene=ldrD;locus_tag=EC55989_3988
NC_011748.1	RefSeq	CDS	4066107	4066349	.	-	0	ID=cds3769;Name=YP_002404916.1;Parent=gene4054;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 12123448%3B Product type f : factor;Dbxref=Genbank:YP_002404916.1,GeneID:7147356;gbkey=CDS;product=toxic polypeptide%2C small;protein_id=YP_002404916.1;transl_table=11
NC_011748.1	RefSeq	gene	4066745	4066808	.	+	.	ID=gene4055;Name=rdlC;Dbxref=GeneID:7146686;gbkey=Gene;gene=rdlC;locus_tag=EC55989_misc_RNA_90
NC_011748.1	RefSeq	transcript	4066745	4066808	.	+	.	ID=rna167;Parent=gene4055;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 12123448%3B Product type n : RNA;Dbxref=GeneID:7146686;gbkey=misc_RNA;product=RdlC
NC_011748.1	RefSeq	exon	4066745	4066808	.	+	.	ID=id329;Parent=rna167;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 12123448%3B Product type n : RNA;Dbxref=GeneID:7146686;gbkey=misc_RNA;product=RdlC
NC_011748.1	RefSeq	gene	4066861	4067022	.	-	.	ID=gene4056;Name=EC55989_3989;Dbxref=GeneID:7147355;gbkey=Gene;locus_tag=EC55989_3989
NC_011748.1	RefSeq	CDS	4066861	4067022	.	-	0	ID=cds3770;Name=YP_002404917.1;Parent=gene4056;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404917.1,GeneID:7147355;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404917.1;transl_table=11
NC_011748.1	RefSeq	gene	4067172	4068443	.	+	.	ID=gene4057;Name=yhjV;Dbxref=GeneID:7145053;gbkey=Gene;gene=yhjV;locus_tag=EC55989_3990
NC_011748.1	RefSeq	CDS	4067172	4068443	.	+	0	ID=cds3771;Name=YP_002404918.1;Parent=gene4057;Note=Evidence 2b : Function of strongly homologous gene%3B PubMedId : 15901718%3B Product type t : transporter;Dbxref=Genbank:YP_002404918.1,GeneID:7145053;gbkey=CDS;product=transporter;protein_id=YP_002404918.1;transl_table=11
NC_011748.1	RefSeq	gene	4068473	4069477	.	-	.	ID=gene4058;Name=dppF;Dbxref=GeneID:7149016;gbkey=Gene;gene=dppF;locus_tag=EC55989_3991
NC_011748.1	RefSeq	CDS	4068473	4069477	.	-	0	ID=cds3772;Name=YP_002404919.1;Parent=gene4058;Note=Part of the ABC transporter complex DppABCDF involved in the transport of dipeptides;Dbxref=Genbank:YP_002404919.1,GeneID:7149016;gbkey=CDS;product=dipeptide transporter ATP-binding subunit;protein_id=YP_002404919.1;transl_table=11
NC_011748.1	RefSeq	gene	4069474	4070457	.	-	.	ID=gene4059;Name=dppD;Dbxref=GeneID:7145948;gbkey=Gene;gene=dppD;locus_tag=EC55989_3992
NC_011748.1	RefSeq	CDS	4069474	4070457	.	-	0	ID=cds3773;Name=YP_002404920.1;Parent=gene4059;Note=DppD and DppF are the ATP-binding components of the ABC dipeptide transport system DppABCDF;Dbxref=Genbank:YP_002404920.1,GeneID:7145948;gbkey=CDS;product=dipeptide transporter ATP-binding subunit;protein_id=YP_002404920.1;transl_table=11
NC_011748.1	RefSeq	gene	4070468	4071370	.	-	.	ID=gene4060;Name=dppC;Dbxref=GeneID:7145947;gbkey=Gene;gene=dppC;locus_tag=EC55989_3993
NC_011748.1	RefSeq	CDS	4070468	4071370	.	-	0	ID=cds3774;Name=YP_002404921.1;Parent=gene4060;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 7536291%3B Product type t : transporter;Dbxref=Genbank:YP_002404921.1,GeneID:7145947;gbkey=CDS;product=dipeptide transporter;protein_id=YP_002404921.1;transl_table=11
NC_011748.1	RefSeq	gene	4071380	4072399	.	-	.	ID=gene4061;Name=dppB;Dbxref=GeneID:7145946;gbkey=Gene;gene=dppB;locus_tag=EC55989_3994
NC_011748.1	RefSeq	CDS	4071380	4072399	.	-	0	ID=cds3775;Name=YP_002404922.1;Parent=gene4061;Note=transports peptides consisting of two or three amino acids;Dbxref=Genbank:YP_002404922.1,GeneID:7145946;gbkey=CDS;product=dipeptide transporter permease DppB;protein_id=YP_002404922.1;transl_table=11
NC_011748.1	RefSeq	gene	4072417	4072560	.	+	.	ID=gene4062;Name=EC55989_3995;Dbxref=GeneID:7145945;gbkey=Gene;locus_tag=EC55989_3995
NC_011748.1	RefSeq	CDS	4072417	4072560	.	+	0	ID=cds3776;Name=YP_002404923.1;Parent=gene4062;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404923.1,GeneID:7145945;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404923.1;transl_table=11
NC_011748.1	RefSeq	gene	4072550	4074157	.	-	.	ID=gene4063;Name=dppA;Dbxref=GeneID:7145054;gbkey=Gene;gene=dppA;locus_tag=EC55989_3996
NC_011748.1	RefSeq	CDS	4072550	4074157	.	-	0	ID=cds3777;Name=YP_002404924.1;Parent=gene4063;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 91100289%2C 92065799%2C 1702779%2C 1956284%2C 7536291%2C 8527431%2C 8563629%2C 9298646%2C 9600841%2C 9740056%2C 10972807%3B Product type t : transporter;Dbxref=Genbank:YP_002404924.1,GeneID:7145054;gbkey=CDS;product=dipeptide transporter %3B periplasmic-binding component of ABC superfamily;protein_id=YP_002404924.1;transl_table=11
NC_011748.1	RefSeq	gene	4074901	4074977	.	-	.	ID=gene4064;Name=EC55989_tRNA60;Dbxref=GeneID:7145944;gbkey=Gene;locus_tag=EC55989_tRNA60
NC_011748.1	RefSeq	tRNA	4074901	4074977	.	-	.	ID=rna168;Dbxref=GeneID:7145944;gbkey=tRNA;product=tRNA-Pro
NC_011748.1	RefSeq	exon	4074901	4074977	.	-	.	ID=id330;Parent=rna168;Dbxref=GeneID:7145944;gbkey=tRNA;product=tRNA-Pro
NC_011748.1	RefSeq	gene	4075069	4076760	.	-	.	ID=gene4065;Name=eptB;Dbxref=GeneID:7145373;gbkey=Gene;gene=eptB;locus_tag=EC55989_3997
NC_011748.1	RefSeq	CDS	4075069	4076760	.	-	0	ID=cds3778;Name=YP_002404925.1;Parent=gene4065;Note=catalyzes the addition of a phosphoethanolamine group to the outer Kdo residue of lipopolysaccharide;Dbxref=Genbank:YP_002404925.1,GeneID:7145373;gbkey=CDS;product=phosphoethanolamine transferase;protein_id=YP_002404925.1;transl_table=11
NC_011748.1	RefSeq	gene	4077013	4077537	.	-	.	ID=gene4066;Name=lpfE;Dbxref=GeneID:7146019;gbkey=Gene;gene=lpfE;locus_tag=EC55989_3998
NC_011748.1	RefSeq	CDS	4077013	4077537	.	-	0	ID=cds3779;Name=YP_002404926.1;Parent=gene4066;Note=Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism%3B PubMedId : 14977923%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002404926.1,GeneID:7146019;gbkey=CDS;product=LpfE protein precursor;protein_id=YP_002404926.1;transl_table=11
NC_011748.1	RefSeq	gene	4077543	4078598	.	-	.	ID=gene4067;Name=lpfD;Dbxref=GeneID:7146730;gbkey=Gene;gene=lpfD;locus_tag=EC55989_3999
NC_011748.1	RefSeq	CDS	4077543	4078598	.	-	0	ID=cds3780;Name=YP_002404927.1;Parent=gene4067;Note=Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism%3B PubMedId : 14977923%3B Product type m : membrane component;Dbxref=Genbank:YP_002404927.1,GeneID:7146730;gbkey=CDS;product=LpfD protein precursor;protein_id=YP_002404927.1;transl_table=11
NC_011748.1	RefSeq	gene	4078609	4081140	.	-	.	ID=gene4068;Name=lpfC;Dbxref=GeneID:7146728;gbkey=Gene;gene=lpfC;locus_tag=EC55989_4000
NC_011748.1	RefSeq	CDS	4078609	4081140	.	-	0	ID=cds3781;Name=YP_002404928.1;Parent=gene4068;Note=Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism%3B PubMedId : 14977923%3B Product type m : membrane component;Dbxref=Genbank:YP_002404928.1,GeneID:7146728;gbkey=CDS;product=Outer membrane usher protein lpfC precursor;protein_id=YP_002404928.1;transl_table=11
NC_011748.1	RefSeq	gene	4081164	4081850	.	-	.	ID=gene4069;Name=lpfB;Dbxref=GeneID:7146726;gbkey=Gene;gene=lpfB;locus_tag=EC55989_4001
NC_011748.1	RefSeq	CDS	4081164	4081850	.	-	0	ID=cds3782;Name=YP_002404929.1;Parent=gene4069;Note=Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism%3B PubMedId : 14977923%3B Product type m : membrane component;Dbxref=Genbank:YP_002404929.1,GeneID:7146726;gbkey=CDS;product=Chaperone protein lpfB precursor;protein_id=YP_002404929.1;transl_table=11
NC_011748.1	RefSeq	gene	4081934	4082458	.	-	.	ID=gene4070;Name=lpfA;Dbxref=GeneID:7146725;gbkey=Gene;gene=lpfA;locus_tag=EC55989_4002
NC_011748.1	RefSeq	CDS	4081934	4082458	.	-	0	ID=cds3783;Name=YP_002404930.1;Parent=gene4070;Note=Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism%3B PubMedId : 14977923%3B Product type m : membrane component;Dbxref=Genbank:YP_002404930.1,GeneID:7146725;gbkey=CDS;product=Long polar fimbria protein A precursor;protein_id=YP_002404930.1;transl_table=11
NC_011748.1	RefSeq	gene	4082782	4084029	.	-	.	ID=gene4071;Name=yhjX;Dbxref=GeneID:7146723;gbkey=Gene;gene=yhjX;locus_tag=EC55989_4003
NC_011748.1	RefSeq	CDS	4082782	4084029	.	-	0	ID=cds3784;Name=YP_002404931.1;Parent=gene4071;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002404931.1,GeneID:7146723;gbkey=CDS;product=transporter;protein_id=YP_002404931.1;transl_table=11
NC_011748.1	RefSeq	gene	4084213	4084911	.	-	.	ID=gene4072;Name=yhjY;Dbxref=GeneID:7149017;gbkey=Gene;gene=yhjY;locus_tag=EC55989_4004
NC_011748.1	RefSeq	CDS	4084213	4084911	.	-	0	ID=cds3785;Name=YP_002404932.1;Parent=gene4072;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404932.1,GeneID:7149017;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404932.1;transl_table=11
NC_011748.1	RefSeq	gene	4085069	4085632	.	+	.	ID=gene4073;Name=tag;Dbxref=GeneID:7149018;gbkey=Gene;gene=tag;locus_tag=EC55989_4005
NC_011748.1	RefSeq	CDS	4085069	4085632	.	+	0	ID=cds3786;Name=YP_002404933.1;Parent=gene4073;Note=constitutive%2C catalyzes the hydrolysis of alkylated DNA%2C releasing 3-methyladenine;Dbxref=Genbank:YP_002404933.1,GeneID:7149018;gbkey=CDS;product=3-methyladenine DNA glycosylase;protein_id=YP_002404933.1;transl_table=11
NC_011748.1	RefSeq	gene	4085629	4086069	.	+	.	ID=gene4074;Name=yiaC;Dbxref=GeneID:7147746;gbkey=Gene;gene=yiaC;locus_tag=EC55989_4006
NC_011748.1	RefSeq	CDS	4085629	4086069	.	+	0	ID=cds3787;Name=YP_002404934.1;Parent=gene4074;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 11237876%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002404934.1,GeneID:7147746;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404934.1;transl_table=11
NC_011748.1	RefSeq	gene	4086038	4088317	.	-	.	ID=gene4075;Name=bisC;Dbxref=GeneID:7149021;gbkey=Gene;gene=bisC;locus_tag=EC55989_4007
NC_011748.1	RefSeq	CDS	4086038	4088317	.	-	0	ID=cds3788;Name=YP_002404935.1;Parent=gene4075;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 82119950%2C 90202748%2C 2180922%2C 374979%3B Product type e : enzyme;Dbxref=Genbank:YP_002404935.1,GeneID:7149021;gbkey=CDS;product=biotin sulfoxide reductase;protein_id=YP_002404935.1;transl_table=11
NC_011748.1	RefSeq	gene	4088524	4089183	.	+	.	ID=gene4076;Name=yiaD;Dbxref=GeneID:7145632;gbkey=Gene;gene=yiaD;locus_tag=EC55989_4008
NC_011748.1	RefSeq	CDS	4088524	4089183	.	+	0	ID=cds3789;Name=YP_002404936.1;Parent=gene4076;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002404936.1,GeneID:7145632;gbkey=CDS;product=outer membrane lipoprotein;protein_id=YP_002404936.1;transl_table=11
NC_011748.1	RefSeq	gene	4089287	4090261	.	+	.	ID=gene4077;Name=tiaE;Dbxref=GeneID:7149022;gbkey=Gene;gene=tiaE;locus_tag=EC55989_4009
NC_011748.1	RefSeq	CDS	4089287	4090261	.	+	0	ID=cds3790;Name=YP_002404937.1;Parent=gene4077;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 15801772%2C 11237876%2C 99030322%2C 99357626%2C 9298646%2C 9811658%3B Product type e : enzyme;Dbxref=Genbank:YP_002404937.1,GeneID:7149022;gbkey=CDS;product=2-oxo-carboxylic acid reductase %28glyoxalate reductase%29 %282-ketoaldonate reductase%29;protein_id=YP_002404937.1;transl_table=11
NC_011748.1	RefSeq	gene	4090311	4091021	.	-	.	ID=gene4078;Name=yiaF;Dbxref=GeneID:7147800;gbkey=Gene;gene=yiaF;locus_tag=EC55989_4010
NC_011748.1	RefSeq	CDS	4090311	4091021	.	-	0	ID=cds3791;Name=YP_002404938.1;Parent=gene4078;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404938.1,GeneID:7147800;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404938.1;transl_table=11
NC_011748.1	RefSeq	gene	4091455	4091745	.	+	.	ID=gene4079;Name=yiaG;Dbxref=GeneID:7149023;gbkey=Gene;gene=yiaG;locus_tag=EC55989_4011
NC_011748.1	RefSeq	CDS	4091455	4091745	.	+	0	ID=cds3792;Name=YP_002404939.1;Parent=gene4079;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pr :  regulator;Dbxref=Genbank:YP_002404939.1,GeneID:7149023;gbkey=CDS;product=transcriptional regulator;protein_id=YP_002404939.1;transl_table=11
NC_011748.1	RefSeq	gene	4092026	4092238	.	+	.	ID=gene4080;Name=cspA;Dbxref=GeneID:7149024;gbkey=Gene;gene=cspA;locus_tag=EC55989_4012
NC_011748.1	RefSeq	CDS	4092026	4092238	.	+	0	ID=cds3793;Name=YP_002404940.1;Parent=gene4080;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 20345064%2C 90115858%2C 94293754%2C 94293756%2C 99177178%2C 10696873%2C 1597410%2C 1961761%2C 2404279%2C 7515185%2C 8197194%2C 9405743%2C 9439003%2C 9692981%3B Product type f : factor;Dbxref=Genbank:YP_002404940.1,GeneID:7149024;gbkey=CDS;product=major cold shock protein;protein_id=YP_002404940.1;transl_table=11
NC_011748.1	RefSeq	gene	4092904	4094973	.	-	.	ID=gene4081;Name=glyS;Dbxref=GeneID:7145777;gbkey=Gene;gene=glyS;locus_tag=EC55989_4013
NC_011748.1	RefSeq	CDS	4092904	4094973	.	-	0	ID=cds3794;Name=YP_002404941.1;Parent=gene4081;Note=glycine--tRNA ligase beta chain%3B glyS%3B class II aminoacyl tRNA synthetase%3B tetramer of alpha%282%29beta%282%29%3B catalyzes a two-step reaction%3B first charging a glycine molecule by linking the carboxyl group to the alpha-phosphate of ATP%3B second by transfer of the aminoacyl-adenylate to its tRNA;Dbxref=Genbank:YP_002404941.1,GeneID:7145777;gbkey=CDS;product=glycyl-tRNA synthetase subunit beta;protein_id=YP_002404941.1;transl_table=11
NC_011748.1	RefSeq	gene	4094983	4095894	.	-	.	ID=gene4082;Name=glyQ;Dbxref=GeneID:7146341;gbkey=Gene;gene=glyQ;locus_tag=EC55989_4014
NC_011748.1	RefSeq	CDS	4094983	4095894	.	-	0	ID=cds3795;Name=YP_002404942.1;Parent=gene4082;Note=glycine--tRNA ligase alpha chain%3B GlyRS%3B class II aminoacyl tRNA synthetase%3B tetramer of alpha%282%29beta%282%29%3B catalyzes a two-step reaction%3B first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP%3B second by transfer of the aminoacyl-adenylate to its tRNA;Dbxref=Genbank:YP_002404942.1,GeneID:7146341;gbkey=CDS;product=glycyl-tRNA synthetase subunit alpha;protein_id=YP_002404942.1;transl_table=11
NC_011748.1	RefSeq	gene	4095989	4096288	.	-	.	ID=gene4083;Name=ysaB;Dbxref=GeneID:7146340;gbkey=Gene;gene=ysaB;locus_tag=EC55989_4015
NC_011748.1	RefSeq	CDS	4095989	4096288	.	-	0	ID=cds3796;Name=YP_002404943.1;Parent=gene4083;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404943.1,GeneID:7146340;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404943.1;transl_table=11
NC_011748.1	RefSeq	gene	4096463	4097458	.	+	.	ID=gene4084;Name=yiaH;Dbxref=GeneID:7149467;gbkey=Gene;gene=yiaH;locus_tag=EC55989_4016
NC_011748.1	RefSeq	CDS	4096463	4097458	.	+	0	ID=cds3797;Name=YP_002404944.1;Parent=gene4084;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002404944.1,GeneID:7149467;gbkey=CDS;product=inner membrane protein;protein_id=YP_002404944.1;transl_table=11
NC_011748.1	RefSeq	STS	4097211	4097357	.	+	.	ID=id331;Dbxref=UniSTS:48310,GeneID:7149467;gbkey=STS
NC_011748.1	RefSeq	gene	4097500	4097937	.	-	.	ID=gene4085;Name=yiaA;Dbxref=GeneID:7149025;gbkey=Gene;gene=yiaA;locus_tag=EC55989_4017
NC_011748.1	RefSeq	CDS	4097500	4097937	.	-	0	ID=cds3798;Name=YP_002404945.1;Parent=gene4085;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002404945.1,GeneID:7149025;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404945.1;transl_table=11
NC_011748.1	RefSeq	gene	4097983	4098324	.	-	.	ID=gene4086;Name=yiaB;Dbxref=GeneID:7149019;gbkey=Gene;gene=yiaB;locus_tag=EC55989_4018
NC_011748.1	RefSeq	CDS	4097983	4098324	.	-	0	ID=cds3799;Name=YP_002404946.1;Parent=gene4086;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 6320721%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002404946.1,GeneID:7149019;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404946.1;transl_table=11
NC_011748.1	RefSeq	gene	4098493	4099947	.	-	.	ID=gene4087;Name=xylB;Dbxref=GeneID:7149020;gbkey=Gene;gene=xylB;locus_tag=EC55989_4019
NC_011748.1	RefSeq	CDS	4098493	4099947	.	-	0	ID=cds3800;Name=YP_002404947.1;Parent=gene4087;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 6330500%2C 92366447%2C 95050816%2C 6320721%3B Product type e : enzyme;Dbxref=Genbank:YP_002404947.1,GeneID:7149020;gbkey=CDS;product=xylulokinase;protein_id=YP_002404947.1;transl_table=11
NC_011748.1	RefSeq	gene	4100019	4101341	.	-	.	ID=gene4088;Name=xylA;Dbxref=GeneID:7147996;gbkey=Gene;gene=xylA;locus_tag=EC55989_4020
NC_011748.1	RefSeq	CDS	4100019	4101341	.	-	0	ID=cds3801;Name=YP_002404948.1;Parent=gene4088;Note=catalyzes the interconversion of D-xylose to D-xylulose;Dbxref=Genbank:YP_002404948.1,GeneID:7147996;gbkey=CDS;product=xylose isomerase;protein_id=YP_002404948.1;transl_table=11
NC_011748.1	RefSeq	gene	4101707	4102699	.	+	.	ID=gene4089;Name=xylF;Dbxref=GeneID:7147995;gbkey=Gene;gene=xylF;locus_tag=EC55989_4021
NC_011748.1	RefSeq	CDS	4101707	4102699	.	+	0	ID=cds3802;Name=YP_002404949.1;Parent=gene4089;Note=periplasmic substrate-binding component of the ATP-dependent xylose transport system%3B high affinity;Dbxref=Genbank:YP_002404949.1,GeneID:7147995;gbkey=CDS;product=D-xylose transporter subunit XylF;protein_id=YP_002404949.1;transl_table=11
NC_011748.1	RefSeq	gene	4102777	4104318	.	+	.	ID=gene4090;Name=xylG;Dbxref=GeneID:7147998;gbkey=Gene;gene=xylG;locus_tag=EC55989_4022
NC_011748.1	RefSeq	CDS	4102777	4104318	.	+	0	ID=cds3803;Name=YP_002404950.1;Parent=gene4090;Note=with XylFH is part of the high affinity xylose ABC transporter;Dbxref=Genbank:YP_002404950.1,GeneID:7147998;gbkey=CDS;product=xylose transporter ATP-binding subunit;protein_id=YP_002404950.1;transl_table=11
NC_011748.1	RefSeq	gene	4104296	4105477	.	+	.	ID=gene4091;Name=xylH;Dbxref=GeneID:7147999;gbkey=Gene;gene=xylH;locus_tag=EC55989_4023
NC_011748.1	RefSeq	CDS	4104296	4105477	.	+	0	ID=cds3804;Name=YP_002404951.1;Parent=gene4091;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 94316500%3B Product type t : transporter;Dbxref=Genbank:YP_002404951.1,GeneID:7147999;gbkey=CDS;product=D-xylose transporter subunit %3B membrane component of ABC superfamily;protein_id=YP_002404951.1;transl_table=11
NC_011748.1	RefSeq	gene	4105389	4105565	.	+	.	ID=gene4092;Name=EC55989_4024;Dbxref=GeneID:7148000;gbkey=Gene;locus_tag=EC55989_4024
NC_011748.1	RefSeq	CDS	4105389	4105565	.	+	0	ID=cds3805;Name=YP_002404952.1;Parent=gene4092;Note=Evidence 6 : Doubtful CDS;Dbxref=Genbank:YP_002404952.1,GeneID:7148000;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404952.1;transl_table=11
NC_011748.1	RefSeq	gene	4105555	4106733	.	+	.	ID=gene4093;Name=xylR;Dbxref=GeneID:7145055;gbkey=Gene;gene=xylR;locus_tag=EC55989_4025
NC_011748.1	RefSeq	CDS	4105555	4106733	.	+	0	ID=cds3806;Name=YP_002404953.1;Parent=gene4093;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 6330500%2C 94316500%3B Product type r : regulator;Dbxref=Genbank:YP_002404953.1,GeneID:7145055;gbkey=CDS;product=DNA-binding transcriptional activator%2C xylose-binding;protein_id=YP_002404953.1;transl_table=11
NC_011748.1	RefSeq	gene	4106929	4107753	.	-	.	ID=gene4094;Name=bax;Dbxref=GeneID:7148001;gbkey=Gene;gene=bax;locus_tag=EC55989_4026
NC_011748.1	RefSeq	CDS	4106929	4107753	.	-	0	ID=cds3807;Name=YP_002404954.1;Parent=gene4094;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 1544897;Dbxref=Genbank:YP_002404954.1,GeneID:7148001;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404954.1;transl_table=11
NC_011748.1	RefSeq	gene	4108073	4110103	.	+	.	ID=gene4095;Name=malS;Dbxref=GeneID:7145599;gbkey=Gene;gene=malS;locus_tag=EC55989_4028
NC_011748.1	RefSeq	CDS	4108073	4110103	.	+	0	ID=cds3808;Name=YP_002404955.1;Parent=gene4095;Note=periplasmic enzyme that degrades maltodextrins that enter via the outer membrane porin LamB%3B hydrolyzes alpha-%281%2C4%29 glycosidic linkages%3B contains internal disulfide bonds;Dbxref=Genbank:YP_002404955.1,GeneID:7145599;gbkey=CDS;product=periplasmic alpha-amylase;protein_id=YP_002404955.1;transl_table=11
NC_011748.1	RefSeq	STS	4109919	4110269	.	+	.	ID=id332;Dbxref=UniSTS:52726;gbkey=STS
NC_011748.1	RefSeq	gene	4110281	4111534	.	+	.	ID=gene4096;Name=avtA;Dbxref=GeneID:7146776;gbkey=Gene;gene=avtA;locus_tag=EC55989_4029
NC_011748.1	RefSeq	CDS	4110281	4111534	.	+	0	ID=cds3809;Name=YP_002404956.1;Parent=gene4096;Note=transaminase C%3B catalyzes transamination of alanine%2C valine%2C and 2-aminobutyrate with their respective 2-keto acids%3B also catalyzes terminal step in valine biosynthesis;Dbxref=Genbank:YP_002404956.1,GeneID:7146776;gbkey=CDS;product=valine--pyruvate transaminase;protein_id=YP_002404956.1;transl_table=11
NC_011748.1	RefSeq	gene	4111686	4112159	.	-	.	ID=gene4097;Name=yiaI;Dbxref=GeneID:7145589;gbkey=Gene;gene=yiaI;locus_tag=EC55989_4030
NC_011748.1	RefSeq	CDS	4111686	4112159	.	-	0	ID=cds3810;Name=YP_002404957.1;Parent=gene4097;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pc :  carrier;Dbxref=Genbank:YP_002404957.1,GeneID:7145589;gbkey=CDS;product=hydrogenase%2C 4Fe-4S ferredoxin-type component;protein_id=YP_002404957.1;transl_table=11
NC_011748.1	RefSeq	gene	4112261	4113109	.	-	.	ID=gene4098;Name=yiaJ;Dbxref=GeneID:7149026;gbkey=Gene;gene=yiaJ;locus_tag=EC55989_4031
NC_011748.1	RefSeq	CDS	4112261	4113109	.	-	0	ID=cds3811;Name=YP_002404958.1;Parent=gene4098;Note=Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism%3B PubMedId : 20372646%2C 9826648%3B Product type r : regulator;Dbxref=Genbank:YP_002404958.1,GeneID:7149026;gbkey=CDS;product=DNA-binding transcriptional repressor;protein_id=YP_002404958.1;transl_table=11
NC_011748.1	RefSeq	gene	4113310	4114308	.	+	.	ID=gene4099;Name=yiaK;Dbxref=GeneID:7149027;gbkey=Gene;gene=yiaK;locus_tag=EC55989_4032
NC_011748.1	RefSeq	CDS	4113310	4114308	.	+	0	ID=cds3812;Name=YP_002404959.1;Parent=gene4099;Note=NAD%28P%29H-dependent%3B catalyzes the reduction of 2%2C3-diketo-L-gulonate to 3-keto-L-gulonate;Dbxref=Genbank:YP_002404959.1,GeneID:7149027;gbkey=CDS;product=2%2C3-diketo-L-gulonate reductase;protein_id=YP_002404959.1;transl_table=11
NC_011748.1	RefSeq	gene	4114320	4114787	.	+	.	ID=gene4100;Name=yiaL;Dbxref=GeneID:7149028;gbkey=Gene;gene=yiaL;locus_tag=EC55989_4033
NC_011748.1	RefSeq	CDS	4114320	4114787	.	+	0	ID=cds3813;Name=YP_002404960.1;Parent=gene4100;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 21617392;Dbxref=Genbank:YP_002404960.1,GeneID:7149028;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404960.1;transl_table=11
NC_011748.1	RefSeq	gene	4114905	4115378	.	+	.	ID=gene4101;Name=yiaM;Dbxref=GeneID:7149029;gbkey=Gene;gene=yiaM;locus_tag=EC55989_4034
NC_011748.1	RefSeq	CDS	4114905	4115378	.	+	0	ID=cds3814;Name=YP_002404961.1;Parent=gene4101;Note=membrane-spanning protein involved in uptake of 2%2C3-diketo-L-gulonate%3B part of the tri-partite ATP-independent periplasmic transport system %28TRAP%29 YiaMNO;Dbxref=Genbank:YP_002404961.1,GeneID:7149029;gbkey=CDS;product=2%2C3-diketo-L-gulonate TRAP transporter small permease;protein_id=YP_002404961.1;transl_table=11
NC_011748.1	RefSeq	gene	4115381	4116658	.	+	.	ID=gene4102;Name=yiaN;Dbxref=GeneID:7149030;gbkey=Gene;gene=yiaN;locus_tag=EC55989_4035
NC_011748.1	RefSeq	CDS	4115381	4116658	.	+	0	ID=cds3815;Name=YP_002404962.1;Parent=gene4102;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 14668138%2C 21617392%3B Product type t : transporter;Dbxref=Genbank:YP_002404962.1,GeneID:7149030;gbkey=CDS;product=transporter;protein_id=YP_002404962.1;transl_table=11
NC_011748.1	RefSeq	gene	4116671	4117657	.	+	.	ID=gene4103;Name=yiaO;Dbxref=GeneID:7149031;gbkey=Gene;gene=yiaO;locus_tag=EC55989_4036
NC_011748.1	RefSeq	CDS	4116671	4117657	.	+	0	ID=cds3816;Name=YP_002404963.1;Parent=gene4103;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 14668138%2C 21617392%3B Product type t : transporter;Dbxref=Genbank:YP_002404963.1,GeneID:7149031;gbkey=CDS;product=transporter;protein_id=YP_002404963.1;transl_table=11
NC_011748.1	RefSeq	gene	4117661	4119157	.	+	.	ID=gene4104;Name=lyxK;Dbxref=GeneID:7149032;gbkey=Gene;gene=lyxK;locus_tag=EC55989_4037
NC_011748.1	RefSeq	CDS	4117661	4119157	.	+	0	ID=cds3817;Name=YP_002404964.1;Parent=gene4104;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 21617392%2C 95050816%2C 7961955%3B Product type e : enzyme;Dbxref=Genbank:YP_002404964.1,GeneID:7149032;gbkey=CDS;product=L-xylulose kinase;protein_id=YP_002404964.1;transl_table=11
NC_011748.1	RefSeq	gene	4119154	4119816	.	+	.	ID=gene4105;Name=sgbH;Dbxref=GeneID:7146761;gbkey=Gene;gene=sgbH;locus_tag=EC55989_4038
NC_011748.1	RefSeq	CDS	4119154	4119816	.	+	0	ID=cds3818;Name=YP_002404965.1;Parent=gene4105;Note=catalyzes the formation of L-xylulose-5-phosphate from 3-keto-L-gulonate-6-phosphate;Dbxref=Genbank:YP_002404965.1,GeneID:7146761;gbkey=CDS;product=3-keto-L-gulonate-6-phosphate decarboxylase;protein_id=YP_002404965.1;transl_table=11
NC_011748.1	RefSeq	gene	4119809	4120669	.	+	.	ID=gene4106;Name=sgbU;Dbxref=GeneID:7147648;gbkey=Gene;gene=sgbU;locus_tag=EC55989_4039
NC_011748.1	RefSeq	CDS	4119809	4120669	.	+	0	ID=cds3819;Name=YP_002404966.1;Parent=gene4106;Note=L-xylulose 5-phosphate 3-epimerase activity not yet demonstrated%3B may be involved in the utilization of 2%2C3-diketo-L-gulonate;Dbxref=Genbank:YP_002404966.1,GeneID:7147648;gbkey=CDS;product=L-xylulose 5-phosphate 3-epimerase;protein_id=YP_002404966.1;transl_table=11
NC_011748.1	RefSeq	gene	4120663	4121358	.	+	.	ID=gene4107;Name=sgbE;Dbxref=GeneID:7147649;gbkey=Gene;gene=sgbE;locus_tag=EC55989_4040
NC_011748.1	RefSeq	CDS	4120663	4121358	.	+	0	ID=cds3820;Name=YP_002404967.1;Parent=gene4107;Note=catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate%3B links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source;Dbxref=Genbank:YP_002404967.1,GeneID:7147649;gbkey=CDS;product=L-ribulose-5-phosphate 4-epimerase;protein_id=YP_002404967.1;transl_table=11
NC_011748.1	RefSeq	gene	4121705	4122445	.	-	.	ID=gene4108;Name=yiaT;Dbxref=GeneID:7147647;gbkey=Gene;gene=yiaT;locus_tag=EC55989_4041
NC_011748.1	RefSeq	CDS	4121705	4122445	.	-	0	ID=cds3821;Name=YP_002404968.1;Parent=gene4108;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404968.1,GeneID:7147647;gbkey=CDS;product=outer membrane protein;protein_id=YP_002404968.1;transl_table=11
NC_011748.1	RefSeq	gene	4122569	4123543	.	+	.	ID=gene4109;Name=yiaU;Dbxref=GeneID:7149033;gbkey=Gene;gene=yiaU;locus_tag=EC55989_4042
NC_011748.1	RefSeq	CDS	4122569	4123543	.	+	0	ID=cds3822;Name=YP_002404969.1;Parent=gene4109;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pr :  regulator;Dbxref=Genbank:YP_002404969.1,GeneID:7149033;gbkey=CDS;product=DNA-binding transcriptional regulator;protein_id=YP_002404969.1;transl_table=11
NC_011748.1	RefSeq	gene	4123540	4124676	.	-	.	ID=gene4110;Name=yiaV;Dbxref=GeneID:7149034;gbkey=Gene;gene=yiaV;locus_tag=EC55989_4043
NC_011748.1	RefSeq	CDS	4123540	4124676	.	-	0	ID=cds3823;Name=YP_002404970.1;Parent=gene4110;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 15668009%3B Product type t : transporter;Dbxref=Genbank:YP_002404970.1,GeneID:7149034;gbkey=CDS;product=membrane fusion protein %28MFP%29 component of efflux pump%2C signal anchor;protein_id=YP_002404970.1;transl_table=11
NC_011748.1	RefSeq	gene	4124682	4125005	.	-	.	ID=gene4111;Name=yiaW;Dbxref=GeneID:7149035;gbkey=Gene;gene=yiaW;locus_tag=EC55989_4044
NC_011748.1	RefSeq	CDS	4124682	4125005	.	-	0	ID=cds3824;Name=YP_002404971.1;Parent=gene4111;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002404971.1,GeneID:7149035;gbkey=CDS;product=inner membrane protein;protein_id=YP_002404971.1;transl_table=11
NC_011748.1	RefSeq	gene	4125119	4125331	.	+	.	ID=gene4112;Name=EC55989_4045;Dbxref=GeneID:7149036;gbkey=Gene;locus_tag=EC55989_4045
NC_011748.1	RefSeq	CDS	4125119	4125331	.	+	0	ID=cds3825;Name=YP_002404972.1;Parent=gene4112;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404972.1,GeneID:7149036;gbkey=CDS;product=membrane protein;protein_id=YP_002404972.1;transl_table=11
NC_011748.1	RefSeq	gene	4125550	4127088	.	-	.	ID=gene4113;Name=aldB;Dbxref=GeneID:7145056;gbkey=Gene;gene=aldB;locus_tag=EC55989_4046
NC_011748.1	RefSeq	CDS	4125550	4127088	.	-	0	ID=cds3826;Name=YP_002404973.1;Parent=gene4113;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 95286498%2C 7768815%3B Product type e : enzyme;Dbxref=Genbank:YP_002404973.1,GeneID:7145056;gbkey=CDS;product=aldehyde dehydrogenase;protein_id=YP_002404973.1;transl_table=11
NC_011748.1	RefSeq	gene	4127253	4128404	.	-	.	ID=gene4114;Name=yiaY;Dbxref=GeneID:7145480;gbkey=Gene;gene=yiaY;locus_tag=EC55989_4047
NC_011748.1	RefSeq	CDS	4127253	4128404	.	-	0	ID=cds3827;Name=YP_002404974.1;Parent=gene4114;Note=Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism%3B PubMedId : 2935393%3B Product type e : enzyme;Dbxref=Genbank:YP_002404974.1,GeneID:7145480;gbkey=CDS;product=alcohol dehydrogenase;protein_id=YP_002404974.1;transl_table=11
NC_011748.1	RefSeq	gene	4128594	4130438	.	-	.	ID=gene4115;Name=selB;Dbxref=GeneID:7149037;gbkey=Gene;gene=selB;locus_tag=EC55989_4048
NC_011748.1	RefSeq	CDS	4128594	4130438	.	-	0	ID=cds3828;Name=YP_002404975.1;Parent=gene4115;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 90264431%2C 91317715%2C 9315303%2C 94148228%2C 2140572%2C 2531290%3B Product type f : factor;Dbxref=Genbank:YP_002404975.1,GeneID:7149037;gbkey=CDS;product=selenocysteinyl-tRNA-specific translation factor;protein_id=YP_002404975.1;transl_table=11
NC_011748.1	RefSeq	gene	4130435	4131826	.	-	.	ID=gene4116;Name=selA;Dbxref=GeneID:7147629;gbkey=Gene;gene=selA;locus_tag=EC55989_4049
NC_011748.1	RefSeq	CDS	4130435	4131826	.	-	0	ID=cds3829;Name=YP_002404976.1;Parent=gene4116;Note=catalyzes the formation of selenocysteinyl-tRNA%28Sec%29 from seryl-tRNA%28Sec%29 and L-selenophosphate in selenoprotein biosynthesis;Dbxref=Genbank:YP_002404976.1,GeneID:7147629;gbkey=CDS;product=selenocysteine synthase;protein_id=YP_002404976.1;transl_table=11
NC_011748.1	RefSeq	gene	4131924	4132532	.	-	.	ID=gene4117;Name=yibF;Dbxref=GeneID:7147628;gbkey=Gene;gene=yibF;locus_tag=EC55989_4050
NC_011748.1	RefSeq	CDS	4131924	4132532	.	-	0	ID=cds3830;Name=YP_002404977.1;Parent=gene4117;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 8387990%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002404977.1,GeneID:7147628;gbkey=CDS;product=glutathione S-transferase;protein_id=YP_002404977.1;transl_table=11
NC_011748.1	RefSeq	gene	4132531	4132674	.	+	.	ID=gene4118;Name=EC55989_4051;Dbxref=GeneID:7149041;gbkey=Gene;locus_tag=EC55989_4051
NC_011748.1	RefSeq	CDS	4132531	4132674	.	+	0	ID=cds3831;Name=YP_002404978.1;Parent=gene4118;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404978.1,GeneID:7149041;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404978.1;transl_table=11
NC_011748.1	RefSeq	gene	4132761	4136726	.	+	.	ID=gene4119;Name=rhsB;Dbxref=GeneID:7145057;gbkey=Gene;gene=rhsB;locus_tag=EC55989_4052
NC_011748.1	RefSeq	CDS	4132761	4136726	.	+	0	ID=cds3832;Name=YP_002404979.1;Parent=gene4119;Note=Evidence 2b : Function of strongly homologous gene%3B PubMedId : 98361897%2C 2403547%2C 2644231%2C 7934896%2C 8387990%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002404979.1,GeneID:7145057;gbkey=CDS;product=rhsB element core protein RshB;protein_id=YP_002404979.1;transl_table=11
NC_011748.1	RefSeq	gene	4136968	4137351	.	+	.	ID=gene4120;Name=yhhH;Dbxref=GeneID:7147400;gbkey=Gene;gene=yhhH;locus_tag=EC55989_4053
NC_011748.1	RefSeq	CDS	4136968	4137351	.	+	0	ID=cds3833;Name=YP_002404980.1;Parent=gene4120;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404980.1,GeneID:7147400;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404980.1;transl_table=11
NC_011748.1	RefSeq	gene	4137441	4137959	.	+	.	ID=gene4121;Name=yibA;Dbxref=GeneID:7148978;gbkey=Gene;gene=yibA;locus_tag=EC55989_4054;pseudo=true
NC_011748.1	RefSeq	region	4137441	4137959	.	+	.	ID=id333;Note=fragment of lyase containing HEAT-repeat %28part 1%29%3BEvidence 7 : Gene remnant%3B Product type pe :  enzyme;Dbxref=GeneID:7148978;gbkey=misc_feature
NC_011748.1	RefSeq	gene	4137970	4138473	.	-	.	ID=gene4122;Name=EC55989_4055;Dbxref=GeneID:7149038;gbkey=Gene;locus_tag=EC55989_4055
NC_011748.1	RefSeq	CDS	4137970	4138473	.	-	0	ID=cds3834;Name=YP_002404981.1;Parent=gene4122;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 273224%2C 375010%2C 1849492%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002404981.1,GeneID:7149038;gbkey=CDS;product=Insertion element IS1 1%2F5%2F6 protein InsB;protein_id=YP_002404981.1;transl_table=11
NC_011748.1	RefSeq	gene	4138392	4138667	.	-	.	ID=gene4123;Name=EC55989_4056;Dbxref=GeneID:7145058;gbkey=Gene;locus_tag=EC55989_4056
NC_011748.1	RefSeq	CDS	4138392	4138667	.	-	0	ID=cds3835;Name=YP_002404982.1;Parent=gene4123;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 1849492%3B Product type r : regulator;Dbxref=Genbank:YP_002404982.1,GeneID:7145058;gbkey=CDS;product=Insertion element IS1 protein InsA;protein_id=YP_002404982.1;transl_table=11
NC_011748.1	RefSeq	gene	4138824	4139075	.	+	.	ID=gene4124;Name=yibA;Dbxref=GeneID:7145059;gbkey=Gene;gene=yibA;locus_tag=EC55989_4057;pseudo=true
NC_011748.1	RefSeq	region	4138824	4139075	.	+	.	ID=id334;Note=fragment of lyase containing HEAT-repeat %28part 2%29%3BEvidence 7 : Gene remnant%3B Product type pe :  enzyme;Dbxref=GeneID:7145059;gbkey=misc_feature
NC_011748.1	RefSeq	gene	4139117	4140061	.	+	.	ID=gene4125;Name=EC55989_4058;Dbxref=GeneID:7149039;gbkey=Gene;locus_tag=EC55989_4058
NC_011748.1	RefSeq	CDS	4139117	4140061	.	+	0	ID=cds3836;Name=YP_002404983.1;Parent=gene4125;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404983.1,GeneID:7149039;gbkey=CDS;product=rhs protein %28modular protein%29;protein_id=YP_002404983.1;transl_table=11
NC_011748.1	RefSeq	gene	4140073	4140534	.	+	.	ID=gene4126;Name=yibG;Dbxref=GeneID:7145060;gbkey=Gene;gene=yibG;locus_tag=EC55989_4059
NC_011748.1	RefSeq	CDS	4140073	4140534	.	+	0	ID=cds3837;Name=YP_002404984.1;Parent=gene4126;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404984.1,GeneID:7145060;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404984.1;transl_table=11
NC_011748.1	RefSeq	gene	4141241	4141552	.	+	.	ID=gene4127;Name=EC55989_4060;Dbxref=GeneID:7149042;gbkey=Gene;locus_tag=EC55989_4060;pseudo=true
NC_011748.1	RefSeq	region	4141241	4141552	.	+	.	ID=id335;Note=fragment of conserved hypothetical protein %28partial%29%3BEvidence 7 : Gene remnant;Dbxref=GeneID:7149042;gbkey=misc_feature
NC_011748.1	RefSeq	gene	4142133	4143269	.	-	.	ID=gene4128;Name=yibH;Dbxref=GeneID:7145061;gbkey=Gene;gene=yibH;locus_tag=EC55989_4061
NC_011748.1	RefSeq	CDS	4142133	4143269	.	-	0	ID=cds3838;Name=YP_002404985.1;Parent=gene4128;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404985.1,GeneID:7145061;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404985.1;transl_table=11
NC_011748.1	RefSeq	gene	4143272	4143634	.	-	.	ID=gene4129;Name=yibI;Dbxref=GeneID:7149043;gbkey=Gene;gene=yibI;locus_tag=EC55989_4062
NC_011748.1	RefSeq	CDS	4143272	4143634	.	-	0	ID=cds3839;Name=YP_002404986.1;Parent=gene4129;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002404986.1,GeneID:7149043;gbkey=CDS;product=inner membrane protein;protein_id=YP_002404986.1;transl_table=11
NC_011748.1	RefSeq	gene	4144171	4146084	.	+	.	ID=gene4130;Name=mtlA;Dbxref=GeneID:7149044;gbkey=Gene;gene=mtlA;locus_tag=EC55989_4063
NC_011748.1	RefSeq	CDS	4144171	4146084	.	+	0	ID=cds3840;Name=YP_002404987.1;Parent=gene4130;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 92052139%2C 92283796%2C 94131964%2C 1946374%2C 3135464%2C 3142516%2C 6309813%2C 9551558%3B Product type t : transporter;Dbxref=Genbank:YP_002404987.1,GeneID:7149044;gbkey=CDS;product=fused mannitol-specific PTS enzymes: IIA components %3B IIB components %3B IIC components;protein_id=YP_002404987.1;transl_table=11
NC_011748.1	RefSeq	gene	4146314	4147462	.	+	.	ID=gene4131;Name=mtlD;Dbxref=GeneID:7146914;gbkey=Gene;gene=mtlD;locus_tag=EC55989_4064
NC_011748.1	RefSeq	CDS	4146314	4147462	.	+	0	ID=cds3841;Name=YP_002404988.1;Parent=gene4131;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 90254197%2C 1964486%2C 3135464%2C 6384188%2C 8300537%2C 13295236%3B Product type e : enzyme;Dbxref=Genbank:YP_002404988.1,GeneID:7146914;gbkey=CDS;product=mannitol-1-phosphate 5-dehydrogenase;protein_id=YP_002404988.1;transl_table=11
NC_011748.1	RefSeq	gene	4147462	4148049	.	+	.	ID=gene4132;Name=mtlR;Dbxref=GeneID:7146915;gbkey=Gene;gene=mtlR;locus_tag=EC55989_4065
NC_011748.1	RefSeq	CDS	4147462	4148049	.	+	0	ID=cds3842;Name=YP_002404989.1;Parent=gene4132;Note=Acts as a repressor of the mtlAD operon;Dbxref=Genbank:YP_002404989.1,GeneID:7146915;gbkey=CDS;product=mannitol repressor protein;protein_id=YP_002404989.1;transl_table=11
NC_011748.1	RefSeq	gene	4148061	4148270	.	-	.	ID=gene4133;Name=yibT;Dbxref=GeneID:7146916;gbkey=Gene;gene=yibT;locus_tag=EC55989_4066
NC_011748.1	RefSeq	CDS	4148061	4148270	.	-	0	ID=cds3843;Name=YP_002404990.1;Parent=gene4133;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404990.1,GeneID:7146916;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404990.1;transl_table=11
NC_011748.1	RefSeq	gene	4148555	4148917	.	+	.	ID=gene4134;Name=yibL;Dbxref=GeneID:7149049;gbkey=Gene;gene=yibL;locus_tag=EC55989_4067
NC_011748.1	RefSeq	CDS	4148555	4148917	.	+	0	ID=cds3844;Name=YP_002404991.1;Parent=gene4134;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404991.1,GeneID:7149049;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404991.1;transl_table=11
NC_011748.1	RefSeq	gene	4149461	4150144	.	+	.	ID=gene4135;Name=EC55989_4068;Dbxref=GeneID:7149046;gbkey=Gene;locus_tag=EC55989_4068
NC_011748.1	RefSeq	CDS	4149461	4150144	.	+	0	ID=cds3845;Name=YP_002404992.1;Parent=gene4135;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404992.1,GeneID:7149046;gbkey=CDS;product=hypothetical protein;protein_id=YP_002404992.1;transl_table=11
NC_011748.1	RefSeq	gene	4150188	4155038	.	+	.	ID=gene4136;Name=EC55989_4069;Dbxref=GeneID:7145062;gbkey=Gene;locus_tag=EC55989_4069
NC_011748.1	RefSeq	CDS	4150188	4155038	.	+	0	ID=cds3846;Name=YP_002404993.1;Parent=gene4136;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002404993.1,GeneID:7145062;gbkey=CDS;product=adhesin;protein_id=YP_002404993.1;transl_table=11
NC_011748.1	RefSeq	gene	4155407	4157062	.	+	.	ID=gene4137;Name=lldP;Dbxref=GeneID:7145063;gbkey=Gene;gene=lldP;locus_tag=EC55989_4070
NC_011748.1	RefSeq	CDS	4155407	4157062	.	+	0	ID=cds3847;Name=YP_002404994.1;Parent=gene4137;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 94012541%2C 11283302%2C 11785976%2C 8407843%3B Product type t : transporter;Dbxref=Genbank:YP_002404994.1,GeneID:7145063;gbkey=CDS;product=L-lactate permease;protein_id=YP_002404994.1;transl_table=11
NC_011748.1	RefSeq	gene	4157062	4157838	.	+	.	ID=gene4138;Name=lldR;Dbxref=GeneID:7146712;gbkey=Gene;gene=lldR;locus_tag=EC55989_4071
NC_011748.1	RefSeq	CDS	4157062	4157838	.	+	0	ID=cds3848;Name=YP_002404995.1;Parent=gene4138;Note=represses the lctPRD operon;Dbxref=Genbank:YP_002404995.1,GeneID:7146712;gbkey=CDS;product=DNA-binding transcriptional repressor LldR;protein_id=YP_002404995.1;transl_table=11
NC_011748.1	RefSeq	gene	4157835	4159025	.	+	.	ID=gene4139;Name=lldD;Dbxref=GeneID:7146713;gbkey=Gene;gene=lldD;locus_tag=EC55989_4072
NC_011748.1	RefSeq	CDS	4157835	4159025	.	+	0	ID=cds3849;Name=YP_002404996.1;Parent=gene4139;Note=flavin mononucleotide-dependent dehydrogenase%3B functions in aerobic respiration and also has a role in anaerobic nitrate respiration;Dbxref=Genbank:YP_002404996.1,GeneID:7146713;gbkey=CDS;product=L-lactate dehydrogenase;protein_id=YP_002404996.1;transl_table=11
NC_011748.1	RefSeq	gene	4159211	4159684	.	+	.	ID=gene4140;Name=yibK;Dbxref=GeneID:7146711;gbkey=Gene;gene=yibK;locus_tag=EC55989_4073
NC_011748.1	RefSeq	CDS	4159211	4159684	.	+	0	ID=cds3850;Name=YP_002404997.1;Parent=gene4140;Note=member of the SPOUT superfamily of RNA methyltransferases%3B no methyltransferase activity observed with certain tRNA substrates;Dbxref=Genbank:YP_002404997.1,GeneID:7146711;gbkey=CDS;product=tRNA%2FrRNA methyltransferase YibK;protein_id=YP_002404997.1;transl_table=11
NC_011748.1	RefSeq	gene	4159737	4160558	.	-	.	ID=gene4141;Name=cysE;Dbxref=GeneID:7149045;gbkey=Gene;gene=cysE;locus_tag=EC55989_4074
NC_011748.1	RefSeq	CDS	4159737	4160558	.	-	0	ID=cds3851;Name=YP_002404998.1;Parent=gene4141;Note=catalyzes the O-acetylation of serine;Dbxref=Genbank:YP_002404998.1,GeneID:7149045;gbkey=CDS;product=serine acetyltransferase;protein_id=YP_002404998.1;transl_table=11
NC_011748.1	RefSeq	gene	4160638	4161657	.	-	.	ID=gene4142;Name=gpsA;Dbxref=GeneID:7145824;gbkey=Gene;gene=gpsA;locus_tag=EC55989_4075
NC_011748.1	RefSeq	CDS	4160638	4161657	.	-	0	ID=cds3852;Name=YP_002404999.1;Parent=gene4142;Note=catalyzes the NAD%28P%29H-dependent reduction of glycerol 3-phosphate to glycerone phosphate;Dbxref=Genbank:YP_002404999.1,GeneID:7145824;gbkey=CDS;product=NAD%28P%29H-dependent glycerol-3-phosphate dehydrogenase;protein_id=YP_002404999.1;transl_table=11
NC_011748.1	RefSeq	gene	4161657	4162124	.	-	.	ID=gene4143;Name=secB;Dbxref=GeneID:7146363;gbkey=Gene;gene=secB;locus_tag=EC55989_4076
NC_011748.1	RefSeq	CDS	4161657	4162124	.	-	0	ID=cds3853;Name=YP_002405000.1;Parent=gene4143;Note=molecular chaperone that is required for the normal export of envelope proteins out of the cell cytoplasm%3B in Escherichia coli this proteins forms a homotetramer in the cytoplasm and delivers proteins to be  to SecA;Dbxref=Genbank:YP_002405000.1,GeneID:7146363;gbkey=CDS;product=preprotein translocase subunit SecB;protein_id=YP_002405000.1;transl_table=11
NC_011748.1	RefSeq	gene	4162187	4162438	.	-	.	ID=gene4144;Name=grxC;Dbxref=GeneID:7147621;gbkey=Gene;gene=grxC;locus_tag=EC55989_4077
NC_011748.1	RefSeq	CDS	4162187	4162438	.	-	0	ID=cds3854;Name=YP_002405001.1;Parent=gene4144;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 94316500%2C 95024051%2C 99175138%2C 11031118%2C 7937896%2C 8636094%2C 9973569%3B Product type c : carrier;Dbxref=Genbank:YP_002405001.1,GeneID:7147621;gbkey=CDS;product=glutaredoxin 3;protein_id=YP_002405001.1;transl_table=11
NC_011748.1	RefSeq	gene	4162580	4163011	.	-	.	ID=gene4145;Name=yibN;Dbxref=GeneID:7146372;gbkey=Gene;gene=yibN;locus_tag=EC55989_4078
NC_011748.1	RefSeq	CDS	4162580	4163011	.	-	0	ID=cds3855;Name=YP_002405002.1;Parent=gene4145;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002405002.1,GeneID:7146372;gbkey=CDS;product=rhodanese-related sulfurtransferase;protein_id=YP_002405002.1;transl_table=11
NC_011748.1	RefSeq	gene	4163256	4164800	.	+	.	ID=gene4146;Name=gpmI;Dbxref=GeneID:7149047;gbkey=Gene;gene=gpmI;locus_tag=EC55989_4079
NC_011748.1	RefSeq	CDS	4163256	4164800	.	+	0	ID=cds3856;Name=YP_002405003.1;Parent=gene4146;Note=catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate;Dbxref=Genbank:YP_002405003.1,GeneID:7149047;gbkey=CDS;product=phosphoglyceromutase;protein_id=YP_002405003.1;transl_table=11
NC_011748.1	RefSeq	gene	4164834	4166093	.	+	.	ID=gene4147;Name=envC;Dbxref=GeneID:7146361;gbkey=Gene;gene=envC;locus_tag=EC55989_4080
NC_011748.1	RefSeq	CDS	4164834	4166093	.	+	0	ID=cds3857;Name=YP_002405004.1;Parent=gene4147;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 12113939%2C 21972773%3B Product type cp : cell process;Dbxref=Genbank:YP_002405004.1,GeneID:7146361;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405004.1;transl_table=11
NC_011748.1	RefSeq	gene	4166097	4167056	.	+	.	ID=gene4148;Name=yibQ;Dbxref=GeneID:7146005;gbkey=Gene;gene=yibQ;locus_tag=EC55989_4081
NC_011748.1	RefSeq	CDS	4166097	4167056	.	+	0	ID=cds3858;Name=YP_002405005.1;Parent=gene4148;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002405005.1,GeneID:7146005;gbkey=CDS;product=polysaccharide deacetylase;protein_id=YP_002405005.1;transl_table=11
NC_011748.1	RefSeq	gene	4167043	4168077	.	-	.	ID=gene4149;Name=yibD;Dbxref=GeneID:7149048;gbkey=Gene;gene=yibD;locus_tag=EC55989_4082
NC_011748.1	RefSeq	CDS	4167043	4168077	.	-	0	ID=cds3859;Name=YP_002405006.1;Parent=gene4149;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 15659689%2C 2647748%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002405006.1,GeneID:7149048;gbkey=CDS;product=glycosyl transferase family protein;protein_id=YP_002405006.1;transl_table=11
NC_011748.1	RefSeq	gene	4168316	4169341	.	-	.	ID=gene4150;Name=tdh;Dbxref=GeneID:7149040;gbkey=Gene;gene=tdh;locus_tag=EC55989_4083
NC_011748.1	RefSeq	CDS	4168316	4169341	.	-	0	ID=cds3860;Name=YP_002405007.1;Parent=gene4150;Note=converts threonine and NAD to 1%2C2-amino-3-oxobutanoate and NADH%3B functions in threonine catabolism;Dbxref=Genbank:YP_002405007.1,GeneID:7149040;gbkey=CDS;product=L-threonine 3-dehydrogenase;protein_id=YP_002405007.1;transl_table=11
NC_011748.1	RefSeq	gene	4169351	4170547	.	-	.	ID=gene4151;Name=kbl;Dbxref=GeneID:7147771;gbkey=Gene;gene=kbl;locus_tag=EC55989_4084
NC_011748.1	RefSeq	CDS	4169351	4170547	.	-	0	ID=cds3861;Name=YP_002405008.1;Parent=gene4151;Note=catalyzes the formation of 2-amino-3-oxobutanoate from acetyl-CoA and glycine;Dbxref=Genbank:YP_002405008.1,GeneID:7147771;gbkey=CDS;product=2-amino-3-ketobutyrate CoA ligase;protein_id=YP_002405008.1;transl_table=11
NC_011748.1	RefSeq	gene	4170822	4171679	.	-	.	ID=gene4152;Name=htrL;Dbxref=GeneID:7146649;gbkey=Gene;gene=htrL;locus_tag=EC55989_4085
NC_011748.1	RefSeq	CDS	4170822	4171679	.	-	0	ID=cds3862;Name=YP_002405009.1;Parent=gene4152;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405009.1,GeneID:7146649;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405009.1;transl_table=11
NC_011748.1	RefSeq	gene	4171983	4172915	.	+	.	ID=gene4153;Name=rfaD;Dbxref=GeneID:7146479;gbkey=Gene;gene=rfaD;locus_tag=EC55989_4086
NC_011748.1	RefSeq	CDS	4171983	4172915	.	+	0	ID=cds3863;Name=YP_002405010.1;Parent=gene4153;Note=catalyzes the interconversion between ADP-D-glycero-beta-D-manno-heptose and ADP-L-glycero-beta-D-manno-heptose;Dbxref=Genbank:YP_002405010.1,GeneID:7146479;gbkey=CDS;product=ADP-L-glycero-D-manno-heptose-6-epimerase;protein_id=YP_002405010.1;transl_table=11
NC_011748.1	RefSeq	gene	4172925	4173971	.	+	.	ID=gene4154;Name=waaF;Dbxref=GeneID:7147957;gbkey=Gene;gene=waaF;locus_tag=EC55989_4087
NC_011748.1	RefSeq	CDS	4172925	4173971	.	+	0	ID=cds3864;Name=YP_002405011.1;Parent=gene4154;Note=catalyzes the transfer of the second heptose to the heptosyl-KDO2 moiety of the lipopolysaccharide inner core;Dbxref=Genbank:YP_002405011.1,GeneID:7147957;gbkey=CDS;product=ADP-heptose--LPS heptosyltransferase;protein_id=YP_002405011.1;transl_table=11
NC_011748.1	RefSeq	gene	4173975	4174967	.	+	.	ID=gene4155;Name=waaC;Dbxref=GeneID:7147958;gbkey=Gene;gene=waaC;locus_tag=EC55989_4088
NC_011748.1	RefSeq	CDS	4173975	4174967	.	+	0	ID=cds3865;Name=YP_002405012.1;Parent=gene4155;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 20507564%2C 92250420%2C 93239678%2C 9446588%2C 1624462%2C 8478319%3B Product type e : enzyme;Dbxref=Genbank:YP_002405012.1,GeneID:7147958;gbkey=CDS;product=ADP-heptose--LPS heptosyltransferase;protein_id=YP_002405012.1;transl_table=11
NC_011748.1	RefSeq	gene	4174964	4176172	.	+	.	ID=gene4156;Name=rfaL;Dbxref=GeneID:7147956;gbkey=Gene;gene=rfaL;locus_tag=EC55989_4089
NC_011748.1	RefSeq	CDS	4174964	4176172	.	+	0	ID=cds3866;Name=YP_002405013.1;Parent=gene4156;Note=Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism%3B PubMedId : 1657881%3B Product type e : enzyme;Dbxref=Genbank:YP_002405013.1,GeneID:7147956;gbkey=CDS;product=O-antigen ligase;protein_id=YP_002405013.1;transl_table=11
NC_011748.1	RefSeq	gene	4176208	4177350	.	-	.	ID=gene4157;Name=rfaK;Dbxref=GeneID:7147379;gbkey=Gene;gene=rfaK;locus_tag=EC55989_4090
NC_011748.1	RefSeq	CDS	4176208	4177350	.	-	0	ID=cds3867;Name=YP_002405014.1;Parent=gene4157;Note=Evidence 2b : Function of strongly homologous gene%3B Product type e : enzyme;Dbxref=Genbank:YP_002405014.1,GeneID:7147379;gbkey=CDS;product=Lipopolysaccharide 1%2C 2-N-acetylglucosaminetransferase;protein_id=YP_002405014.1;transl_table=11
NC_011748.1	RefSeq	gene	4177359	4178372	.	-	.	ID=gene4158;Name=rfaJ;Dbxref=GeneID:7147378;gbkey=Gene;gene=rfaJ;locus_tag=EC55989_4091
NC_011748.1	RefSeq	CDS	4177359	4178372	.	-	0	ID=cds3868;Name=YP_002405015.1;Parent=gene4158;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 92210496%2C 92250420%2C 92325066%2C 99251135%2C 1624461%3B Product type e : enzyme;Dbxref=Genbank:YP_002405015.1,GeneID:7147378;gbkey=CDS;product=Lipopolysaccharide 1%2C2-glucosyltransferase;protein_id=YP_002405015.1;transl_table=11
NC_011748.1	RefSeq	gene	4178397	4179104	.	-	.	ID=gene4159;Name=rfaY;Dbxref=GeneID:7147377;gbkey=Gene;gene=rfaY;locus_tag=EC55989_4092
NC_011748.1	RefSeq	CDS	4178397	4179104	.	-	0	ID=cds3869;Name=YP_002405016.1;Parent=gene4159;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 1624462%2C 8041620%2C 9278503%2C 92250420%2C 92325067%2C 9756860%3B Product type e : enzyme;Dbxref=Genbank:YP_002405016.1,GeneID:7147377;gbkey=CDS;product=lipopolysaccharide core biosynthesis protein;protein_id=YP_002405016.1;transl_table=11
NC_011748.1	RefSeq	gene	4179130	4180137	.	-	.	ID=gene4160;Name=rfaI;Dbxref=GeneID:7147380;gbkey=Gene;gene=rfaI;locus_tag=EC55989_4093
NC_011748.1	RefSeq	CDS	4179130	4180137	.	-	0	ID=cds3870;Name=YP_002405017.1;Parent=gene4160;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 92210496%2C 92250420%2C 92325066%2C 9765561%2C 1624461%3B Product type e : enzyme;Dbxref=Genbank:YP_002405017.1,GeneID:7147380;gbkey=CDS;product=Lipopolysaccharide 1%2C3-galactosyltransferase;protein_id=YP_002405017.1;transl_table=11
NC_011748.1	RefSeq	gene	4180180	4180986	.	-	.	ID=gene4161;Name=waaP;Dbxref=GeneID:7147376;gbkey=Gene;gene=waaP;locus_tag=EC55989_4094
NC_011748.1	RefSeq	CDS	4180180	4180986	.	-	0	ID=cds3871;Name=YP_002405018.1;Parent=gene4161;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 21101922%2C 92121133%2C 92210496%2C 9756860%2C 1732225%3B Product type e : enzyme;Dbxref=Genbank:YP_002405018.1,GeneID:7147376;gbkey=CDS;product=kinase that phosphorylates core heptose of lipopolysaccharide;protein_id=YP_002405018.1;transl_table=11
NC_011748.1	RefSeq	gene	4180970	4182094	.	-	.	ID=gene4162;Name=waaG;Dbxref=GeneID:7147960;gbkey=Gene;gene=waaG;locus_tag=EC55989_4095
NC_011748.1	RefSeq	CDS	4180970	4182094	.	-	0	ID=cds3872;Name=YP_002405019.1;Parent=gene4162;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 92121133%2C 92210496%2C 92250420%2C 1447141%2C 1732225%2C 7988890%3B Product type e : enzyme;Dbxref=Genbank:YP_002405019.1,GeneID:7147960;gbkey=CDS;product=glucosyltransferase I;protein_id=YP_002405019.1;transl_table=11
NC_011748.1	RefSeq	gene	4182091	4183149	.	-	.	ID=gene4163;Name=waaQ;Dbxref=GeneID:7147959;gbkey=Gene;gene=waaQ;locus_tag=EC55989_4096
NC_011748.1	RefSeq	CDS	4182091	4183149	.	-	0	ID=cds3873;Name=YP_002405020.1;Parent=gene4163;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 9756860%2C 1447141%2C 1732225%3B Product type e : enzyme;Dbxref=Genbank:YP_002405020.1,GeneID:7147959;gbkey=CDS;product=lipopolysaccharide core biosynthesis protein;protein_id=YP_002405020.1;transl_table=11
NC_011748.1	RefSeq	gene	4183562	4184839	.	+	.	ID=gene4164;Name=kdtA;Dbxref=GeneID:7147961;gbkey=Gene;gene=kdtA;locus_tag=EC55989_4097
NC_011748.1	RefSeq	CDS	4183562	4184839	.	+	0	ID=cds3874;Name=YP_002405021.1;Parent=gene4164;Note=catalyzes the transfer of 2-keto-3-deoxy-D-manno-octulosonic acid to lipid A;Dbxref=Genbank:YP_002405021.1,GeneID:7147961;gbkey=CDS;product=3-deoxy-D-manno-octulosonic-acid transferase;protein_id=YP_002405021.1;transl_table=11
NC_011748.1	RefSeq	gene	4184847	4185326	.	+	.	ID=gene4165;Name=coaD;Dbxref=GeneID:7146663;gbkey=Gene;gene=coaD;locus_tag=EC55989_4098
NC_011748.1	RefSeq	CDS	4184847	4185326	.	+	0	ID=cds3875;Name=YP_002405022.1;Parent=gene4165;Note=Catalyzes the conversion of ATP and pantetheine 4%27-phosphate to diphosphate and 3%27-dephospho-coA;Dbxref=Genbank:YP_002405022.1,GeneID:7146663;gbkey=CDS;product=phosphopantetheine adenylyltransferase;protein_id=YP_002405022.1;transl_table=11
NC_011748.1	RefSeq	gene	4185365	4186174	.	-	.	ID=gene4166;Name=mutM;Dbxref=GeneID:7145733;gbkey=Gene;gene=mutM;locus_tag=EC55989_4099
NC_011748.1	RefSeq	CDS	4185365	4186174	.	-	0	ID=cds3876;Name=YP_002405023.1;Parent=gene4166;Note=Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases;Dbxref=Genbank:YP_002405023.1,GeneID:7145733;gbkey=CDS;product=formamidopyrimidine-DNA glycosylase;protein_id=YP_002405023.1;transl_table=11
NC_011748.1	RefSeq	gene	4186272	4186439	.	-	.	ID=gene4167;Name=rpmG;Dbxref=GeneID:7146933;gbkey=Gene;gene=rpmG;locus_tag=EC55989_4100
NC_011748.1	RefSeq	CDS	4186272	4186439	.	-	0	ID=cds3877;Name=YP_002405024.1;Parent=gene4167;Note=in Escherichia coli BM108%2C a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function%3B there are paralogous genes in several bacterial genomes%2C and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31%3B the proteins in this group lack the CXXC motif;Dbxref=Genbank:YP_002405024.1,GeneID:7146933;gbkey=CDS;product=50S ribosomal protein L33;protein_id=YP_002405024.1;transl_table=11
NC_011748.1	RefSeq	gene	4186460	4186696	.	-	.	ID=gene4168;Name=rpmB;Dbxref=GeneID:7147492;gbkey=Gene;gene=rpmB;locus_tag=EC55989_4101
NC_011748.1	RefSeq	CDS	4186460	4186696	.	-	0	ID=cds3878;Name=YP_002405025.1;Parent=gene4168;Note=required for 70S ribosome assembly;Dbxref=Genbank:YP_002405025.1,GeneID:7147492;gbkey=CDS;product=50S ribosomal protein L28;protein_id=YP_002405025.1;transl_table=11
NC_011748.1	RefSeq	gene	4186913	4187581	.	-	.	ID=gene4169;Name=radC;Dbxref=GeneID:7147487;gbkey=Gene;gene=radC;locus_tag=EC55989_4103
NC_011748.1	RefSeq	CDS	4186913	4187581	.	-	0	ID=cds3879;Name=YP_002405026.1;Parent=gene4169;Note=Involved in DNA double-strand break repair and recombination. Promotes the annealing of complementary single-stranded DNA and by simulation of RAD51 recombinase;Dbxref=Genbank:YP_002405026.1,GeneID:7147487;gbkey=CDS;product=DNA repair protein RadC;protein_id=YP_002405026.1;transl_table=11
NC_011748.1	RefSeq	gene	4187753	4188973	.	+	.	ID=gene4170;Name=dfp;Dbxref=GeneID:7149060;gbkey=Gene;gene=dfp;locus_tag=EC55989_4104
NC_011748.1	RefSeq	CDS	4187753	4188973	.	+	0	ID=cds3880;Name=YP_002405027.1;Parent=gene4170;Note=catalyzes the conjugation of cysteine to 4%27-phosphopantothenate to form 4-phosphopantothenoylcysteine%2C which is then decarboxylated to form 4%27-phosphopantotheine;Dbxref=Genbank:YP_002405027.1,GeneID:7149060;gbkey=CDS;product=bifunctional phosphopantothenoylcysteine decarboxylase%2Fphosphopantothenate synthase;protein_id=YP_002405027.1;transl_table=11
NC_011748.1	RefSeq	gene	4188954	4189409	.	+	.	ID=gene4171;Name=dut;Dbxref=GeneID:7145893;gbkey=Gene;gene=dut;locus_tag=EC55989_4105
NC_011748.1	RefSeq	CDS	4188954	4189409	.	+	0	ID=cds3881;Name=YP_002405028.1;Parent=gene4171;Note=catalyzes the formation of dUMP from dUTP;Dbxref=Genbank:YP_002405028.1,GeneID:7145893;gbkey=CDS;product=deoxyuridine 5%27-triphosphate nucleotidohydrolase;protein_id=YP_002405028.1;transl_table=11
NC_011748.1	RefSeq	gene	4189516	4190112	.	+	.	ID=gene4172;Name=slmA;Dbxref=GeneID:7145962;gbkey=Gene;gene=slmA;locus_tag=EC55989_4106
NC_011748.1	RefSeq	CDS	4189516	4190112	.	+	0	ID=cds3882;Name=YP_002405029.1;Parent=gene4172;Note=FtsZ binding protein%3B synthetically lethal with a defect in the Min system%3B this protein is the first identified nucleoid occlusion factor which works along with the Min system to properly position the FtsZ ring assembly;Dbxref=Genbank:YP_002405029.1,GeneID:7145962;gbkey=CDS;product=nucleoid occlusion protein;protein_id=YP_002405029.1;transl_table=11
NC_011748.1	RefSeq	gene	4190149	4190790	.	-	.	ID=gene4173;Name=pyrE;Dbxref=GeneID:7147871;gbkey=Gene;gene=pyrE;locus_tag=EC55989_4107
NC_011748.1	RefSeq	CDS	4190149	4190790	.	-	0	ID=cds3883;Name=YP_002405030.1;Parent=gene4173;Note=involved in fifth step of pyrimidine biosynthesis%3B converts orotidine 5%27-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate;Dbxref=Genbank:YP_002405030.1,GeneID:7147871;gbkey=CDS;product=orotate phosphoribosyltransferase;protein_id=YP_002405030.1;transl_table=11
NC_011748.1	RefSeq	gene	4190856	4191596	.	-	.	ID=gene4174;Name=rph;Dbxref=GeneID:7147320;gbkey=Gene;gene=rph;locus_tag=EC55989_4108
NC_011748.1	RefSeq	CDS	4190856	4191596	.	-	0	ID=cds3884;Name=YP_002405031.1;Parent=gene4174;Note=RNase PH%3B tRNA nucleotidyltransferase%3B forms hexamers in Bacillus subtilis%3B phosphoroltic 3%27-5%27 exoribonuclease%3B involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs;Dbxref=Genbank:YP_002405031.1,GeneID:7147320;gbkey=CDS;product=ribonuclease PH;protein_id=YP_002405031.1;transl_table=11
NC_011748.1	RefSeq	STS	4191354	4191678	.	+	.	ID=id336;Dbxref=UniSTS:523638;gbkey=STS
NC_011748.1	RefSeq	gene	4191699	4192562	.	+	.	ID=gene4175;Name=yicC;Dbxref=GeneID:7147461;gbkey=Gene;gene=yicC;locus_tag=EC55989_4109
NC_011748.1	RefSeq	CDS	4191699	4192562	.	+	0	ID=cds3885;Name=YP_002405032.1;Parent=gene4175;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405032.1,GeneID:7147461;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405032.1;transl_table=11
NC_011748.1	RefSeq	gene	4192771	4193607	.	+	.	ID=gene4176;Name=dinD;Dbxref=GeneID:7149050;gbkey=Gene;gene=dinD;locus_tag=EC55989_4110
NC_011748.1	RefSeq	CDS	4192771	4193607	.	+	0	ID=cds3886;Name=YP_002405033.1;Parent=gene4176;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 913680%2C 94334998%2C 95095962%2C 1925027%2C 2158980%2C 2664418%2C 8002613%2C 8057377%2C 8195095%3B Product type cp : cell process;Dbxref=Genbank:YP_002405033.1,GeneID:7149050;gbkey=CDS;product=DNA-damage-inducible protein D;protein_id=YP_002405033.1;transl_table=11
NC_011748.1	RefSeq	gene	4193899	4194516	.	+	.	ID=gene4177;Name=yicG;Dbxref=GeneID:7145915;gbkey=Gene;gene=yicG;locus_tag=EC55989_4111
NC_011748.1	RefSeq	CDS	4193899	4194516	.	+	0	ID=cds3887;Name=YP_002405034.1;Parent=gene4177;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002405034.1,GeneID:7145915;gbkey=CDS;product=inner membrane protein;protein_id=YP_002405034.1;transl_table=11
NC_011748.1	RefSeq	gene	4194513	4196195	.	-	.	ID=gene4178;Name=ligB;Dbxref=GeneID:7149052;gbkey=Gene;gene=ligB;locus_tag=EC55989_4112
NC_011748.1	RefSeq	CDS	4194513	4196195	.	-	0	ID=cds3888;Name=YP_002405035.1;Parent=gene4178;Note=this ligase is similar to LigA but it lacks the C-terminal BRCT domain%3B catalyzes strand joining of nicked DNA in the presence of a divalent cation and NAD%2B;Dbxref=Genbank:YP_002405035.1,GeneID:7149052;gbkey=CDS;product=NAD-dependent DNA ligase LigB;protein_id=YP_002405035.1;transl_table=11
NC_011748.1	RefSeq	gene	4196453	4197076	.	+	.	ID=gene4179;Name=gmk;Dbxref=GeneID:7146701;gbkey=Gene;gene=gmk;locus_tag=EC55989_4114
NC_011748.1	RefSeq	CDS	4196453	4197076	.	+	0	ID=cds3889;Name=YP_002405036.1;Parent=gene4179;Note=Essential for recycling GMP and indirectly%2C cGMP;Dbxref=Genbank:YP_002405036.1,GeneID:7146701;gbkey=CDS;product=guanylate kinase;protein_id=YP_002405036.1;transl_table=11
NC_011748.1	RefSeq	gene	4197131	4197406	.	+	.	ID=gene4180;Name=rpoZ;Dbxref=GeneID:7146344;gbkey=Gene;gene=rpoZ;locus_tag=EC55989_4115
NC_011748.1	RefSeq	CDS	4197131	4197406	.	+	0	ID=cds3890;Name=YP_002405037.1;Parent=gene4180;Note=promotes RNA polymerase assembly or stability%3B latches the N- and C-terminal regions of the beta%27 subunit thereby facilitating its interaction with the beta and alpha subunits;Dbxref=Genbank:YP_002405037.1,GeneID:7146344;gbkey=CDS;product=DNA-directed RNA polymerase subunit omega;protein_id=YP_002405037.1;transl_table=11
NC_011748.1	RefSeq	gene	4197425	4199533	.	+	.	ID=gene4181;Name=spoT;Dbxref=GeneID:7147503;gbkey=Gene;gene=spoT;locus_tag=EC55989_4116
NC_011748.1	RefSeq	CDS	4197425	4199533	.	+	0	ID=cds3891;Name=YP_002405038.1;Parent=gene4181;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 12224635%2C 89255395%2C 93266525%2C 94068533%2C 2005134%2C 2549050%3B Product type e : enzyme;Dbxref=Genbank:YP_002405038.1,GeneID:7147503;gbkey=CDS;product=bifunctional %28p%29ppGpp synthetase II%2F guanosine-3%27%2C5%27-bis pyrophosphate 3%27-pyrophosphohydrolase;protein_id=YP_002405038.1;transl_table=11
NC_011748.1	RefSeq	gene	4199540	4200229	.	+	.	ID=gene4182;Name=trmH;Dbxref=GeneID:7147693;gbkey=Gene;gene=trmH;locus_tag=EC55989_4117
NC_011748.1	RefSeq	CDS	4199540	4200229	.	+	0	ID=cds3892;Name=YP_002405039.1;Parent=gene4182;Note=specifically modifies tRNA at position G18;Dbxref=Genbank:YP_002405039.1,GeneID:7147693;gbkey=CDS;product=tRNA guanosine-2%27-O-methyltransferase;protein_id=YP_002405039.1;transl_table=11
NC_011748.1	RefSeq	gene	4200235	4202316	.	+	.	ID=gene4183;Name=recG;Dbxref=GeneID:7147848;gbkey=Gene;gene=recG;locus_tag=EC55989_4118
NC_011748.1	RefSeq	CDS	4200235	4202316	.	+	0	ID=cds3893;Name=YP_002405040.1;Parent=gene4183;Note=catalyzes branch migration in Holliday junction intermediates;Dbxref=Genbank:YP_002405040.1,GeneID:7147848;gbkey=CDS;product=ATP-dependent DNA helicase RecG;protein_id=YP_002405040.1;transl_table=11
NC_011748.1	RefSeq	STS	4201091	4201250	.	+	.	ID=id337;Dbxref=UniSTS:73161,GeneID:7147848;gbkey=STS
NC_011748.1	RefSeq	gene	4202482	4203687	.	-	.	ID=gene4184;Name=gltS;Dbxref=GeneID:7147362;gbkey=Gene;gene=gltS;locus_tag=EC55989_4119
NC_011748.1	RefSeq	CDS	4202482	4203687	.	-	0	ID=cds3894;Name=YP_002405041.1;Parent=gene4184;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 91203811%2C 93106943%2C 1544582%2C 2017136%2C 2254324%3B Product type t : transporter;Dbxref=Genbank:YP_002405041.1,GeneID:7147362;gbkey=CDS;product=glutamate transporter;protein_id=YP_002405041.1;transl_table=11
NC_011748.1	RefSeq	gene	4203967	4205358	.	+	.	ID=gene4185;Name=yicE;Dbxref=GeneID:7146335;gbkey=Gene;gene=yicE;locus_tag=EC55989_4121
NC_011748.1	RefSeq	CDS	4203967	4205358	.	+	0	ID=cds3895;Name=YP_002405042.1;Parent=gene4185;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002405042.1,GeneID:7146335;gbkey=CDS;product=transporter;protein_id=YP_002405042.1;transl_table=11
NC_011748.1	RefSeq	gene	4205479	4207188	.	+	.	ID=gene4186;Name=yicH;Dbxref=GeneID:7149051;gbkey=Gene;gene=yicH;locus_tag=EC55989_4122
NC_011748.1	RefSeq	CDS	4205479	4207188	.	+	0	ID=cds3896;Name=YP_002405043.1;Parent=gene4186;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405043.1,GeneID:7149051;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405043.1;transl_table=11
NC_011748.1	RefSeq	gene	4207241	4209559	.	-	.	ID=gene4187;Name=yicI;Dbxref=GeneID:7149053;gbkey=Gene;gene=yicI;locus_tag=EC55989_4123
NC_011748.1	RefSeq	CDS	4207241	4209559	.	-	0	ID=cds3897;Name=YP_002405044.1;Parent=gene4187;Note=catalyzes the transfer of alpha-xylosyl residue from alpha-xyloside to xylose%2C glucose%2C mannose%2C fructose%2C maltose%2C isomaltose%2C nigerose%2C kojibiose%2C sucrose%2C and trehalose%3B shows higher activity against alpha-xylosyl fluoride%2C isoprimeverose %286-O-alpha-xylopyranosyl-glucopyranose%29%2C and alpha-xyloside in xyloglucan oligosaccharides;Dbxref=Genbank:YP_002405044.1,GeneID:7149053;gbkey=CDS;product=alpha-xylosidase;protein_id=YP_002405044.1;transl_table=11
NC_011748.1	RefSeq	gene	4209569	4210951	.	-	.	ID=gene4188;Name=yicJ;Dbxref=GeneID:7149054;gbkey=Gene;gene=yicJ;locus_tag=EC55989_4124
NC_011748.1	RefSeq	CDS	4209569	4210951	.	-	0	ID=cds3898;Name=YP_002405045.1;Parent=gene4188;Note=may be involved in the transport of galactosides-pentoses-hexuronides;Dbxref=Genbank:YP_002405045.1,GeneID:7149054;gbkey=CDS;product=transporter;protein_id=YP_002405045.1;transl_table=11
NC_011748.1	RefSeq	gene	4211244	4211334	.	+	.	ID=gene4189;Name=EC55989_tRNA36;Dbxref=GeneID:7149055;gbkey=Gene;locus_tag=EC55989_tRNA36
NC_011748.1	RefSeq	tRNA	4211244	4211334	.	+	.	ID=rna169;Dbxref=GeneID:7149055;gbkey=tRNA;product=tRNA-Sec
NC_011748.1	RefSeq	exon	4211244	4211334	.	+	.	ID=id338;Parent=rna169;Dbxref=GeneID:7149055;gbkey=tRNA;product=tRNA-Sec
NC_011748.1	RefSeq	gene	4211444	4211593	.	+	.	ID=gene4190;Name=EC55989_4125;Dbxref=GeneID:7145346;gbkey=Gene;locus_tag=EC55989_4125
NC_011748.1	RefSeq	CDS	4211444	4211593	.	+	0	ID=cds3899;Name=YP_002405046.1;Parent=gene4190;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405046.1,GeneID:7145346;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405046.1;transl_table=11
NC_011748.1	RefSeq	gene	4211975	4213159	.	+	.	ID=gene4191;Name=setC;Dbxref=GeneID:7145064;gbkey=Gene;gene=setC;locus_tag=EC55989_4126
NC_011748.1	RefSeq	CDS	4211975	4213159	.	+	0	ID=cds3900;Name=YP_002405047.1;Parent=gene4191;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 10438463%2C 10209755%3B Product type pt :  transporter;Dbxref=Genbank:YP_002405047.1,GeneID:7145064;gbkey=CDS;product=sugar efflux system;protein_id=YP_002405047.1;transl_table=11
NC_011748.1	RefSeq	gene	4213270	4214193	.	+	.	ID=gene4192;Name=yicL;Dbxref=GeneID:7147638;gbkey=Gene;gene=yicL;locus_tag=EC55989_4127
NC_011748.1	RefSeq	CDS	4213270	4214193	.	+	0	ID=cds3901;Name=YP_002405048.1;Parent=gene4192;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002405048.1,GeneID:7147638;gbkey=CDS;product=inner membrane protein;protein_id=YP_002405048.1;transl_table=11
NC_011748.1	RefSeq	gene	4214197	4215015	.	-	.	ID=gene4193;Name=nlpA;Dbxref=GeneID:7149056;gbkey=Gene;gene=nlpA;locus_tag=EC55989_4128
NC_011748.1	RefSeq	CDS	4214197	4215015	.	-	0	ID=cds3902;Name=YP_002405049.1;Parent=gene4193;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 88298691%2C 89359178%2C 9914480%2C 3003106%3B Product type lp : lipoprotein;Dbxref=Genbank:YP_002405049.1,GeneID:7149056;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405049.1;transl_table=11
NC_011748.1	RefSeq	gene	4215237	4215530	.	+	.	ID=gene4194;Name=yicS;Dbxref=GeneID:7147006;gbkey=Gene;gene=yicS;locus_tag=EC55989_4129
NC_011748.1	RefSeq	CDS	4215237	4215530	.	+	0	ID=cds3903;Name=YP_002405050.1;Parent=gene4194;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405050.1,GeneID:7147006;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405050.1;transl_table=11
NC_011748.1	RefSeq	gene	4215571	4216926	.	-	.	ID=gene4195;Name=nepI;Dbxref=GeneID:7149061;gbkey=Gene;gene=nepI;locus_tag=EC55989_4130
NC_011748.1	RefSeq	CDS	4215571	4216926	.	-	0	ID=cds3904;Name=YP_002405051.1;Parent=gene4195;Note=experimental results in Escherichia coli suggest that this gene encodes an inosine export protein%3B member of major facilitator superfamily%3B MFS;Dbxref=Genbank:YP_002405051.1,GeneID:7149061;gbkey=CDS;product=ribonucleoside transporter;protein_id=YP_002405051.1;transl_table=11
NC_011748.1	RefSeq	gene	4216972	4217424	.	-	.	ID=gene4196;Name=yicN;Dbxref=GeneID:7149057;gbkey=Gene;gene=yicN;locus_tag=EC55989_4131
NC_011748.1	RefSeq	CDS	4216972	4217424	.	-	0	ID=cds3905;Name=YP_002405052.1;Parent=gene4196;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405052.1,GeneID:7149057;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405052.1;transl_table=11
NC_011748.1	RefSeq	gene	4217477	4218811	.	-	.	ID=gene4197;Name=yicO;Dbxref=GeneID:7149058;gbkey=Gene;gene=yicO;locus_tag=EC55989_4132
NC_011748.1	RefSeq	CDS	4217477	4218811	.	-	0	ID=cds3906;Name=YP_002405053.1;Parent=gene4197;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002405053.1,GeneID:7149058;gbkey=CDS;product=xanthine%2Furacil permease;protein_id=YP_002405053.1;transl_table=11
NC_011748.1	RefSeq	gene	4218986	4220752	.	+	.	ID=gene4198;Name=ade;Dbxref=GeneID:7149059;gbkey=Gene;gene=ade;locus_tag=EC55989_4133
NC_011748.1	RefSeq	CDS	4218986	4220752	.	+	0	ID=cds3907;Name=YP_002405054.1;Parent=gene4198;Note=catalyzes the formation of hypoxanthine from adenine%3B in E. coli this activity has been detected in mutant strains but not in wild type;Dbxref=Genbank:YP_002405054.1,GeneID:7149059;gbkey=CDS;product=cryptic adenine deaminase;protein_id=YP_002405054.1;transl_table=11
NC_011748.1	RefSeq	gene	4220797	4222188	.	-	.	ID=gene4199;Name=uhpT;Dbxref=GeneID:7145454;gbkey=Gene;gene=uhpT;locus_tag=EC55989_4134
NC_011748.1	RefSeq	CDS	4220797	4222188	.	-	0	ID=cds3908;Name=YP_002405055.1;Parent=gene4199;Note=cytoplasmic membrane protein that functions as a monomer%3B catalyzes the active transport of sugar-phosphates such as glucose-6-phosphate with the obligatory exchange of inorganic phosphate or organophosphate;Dbxref=Genbank:YP_002405055.1,GeneID:7145454;gbkey=CDS;product=sugar phosphate antiporter;protein_id=YP_002405055.1;transl_table=11
NC_011748.1	RefSeq	gene	4222326	4223645	.	-	.	ID=gene4200;Name=uhpC;Dbxref=GeneID:7147908;gbkey=Gene;gene=uhpC;locus_tag=EC55989_4135
NC_011748.1	RefSeq	CDS	4222326	4223645	.	-	0	ID=cds3909;Name=YP_002405056.1;Parent=gene4200;Note=membrane protein regulates uhpT expression;Dbxref=Genbank:YP_002405056.1,GeneID:7147908;gbkey=CDS;product=regulatory protein UhpC;protein_id=YP_002405056.1;transl_table=11
NC_011748.1	RefSeq	gene	4223655	4225157	.	-	.	ID=gene4201;Name=uhpB;Dbxref=GeneID:7147907;gbkey=Gene;gene=uhpB;locus_tag=EC55989_4136
NC_011748.1	RefSeq	CDS	4223655	4225157	.	-	0	ID=cds3910;Name=YP_002405057.1;Parent=gene4201;Note=Member of the two-component regulatory system UhpB%2FUhpA involved in the regulation of the uptake of hexose ph;Dbxref=Genbank:YP_002405057.1,GeneID:7147907;gbkey=CDS;product=sensory histidine kinase UhpB;protein_id=YP_002405057.1;transl_table=11
NC_011748.1	RefSeq	gene	4225157	4225747	.	-	.	ID=gene4202;Name=uhpA;Dbxref=GeneID:7147906;gbkey=Gene;gene=uhpA;locus_tag=EC55989_4137
NC_011748.1	RefSeq	CDS	4225157	4225747	.	-	0	ID=cds3911;Name=YP_002405058.1;Parent=gene4202;Note=response regulator in two-component regulatory system wtih UhpB%3B phosphorylated UhpA is a positive activator uhpT%2C a hexose phosphates transporter;Dbxref=Genbank:YP_002405058.1,GeneID:7147906;gbkey=CDS;product=DNA-binding transcriptional activator UhpA;protein_id=YP_002405058.1;transl_table=11
NC_011748.1	RefSeq	gene	4225822	4226112	.	-	.	ID=gene4203;Name=ilvN;Dbxref=GeneID:7147905;gbkey=Gene;gene=ilvN;locus_tag=EC55989_4138
NC_011748.1	RefSeq	CDS	4225822	4226112	.	-	0	ID=cds3912;Name=YP_002405059.1;Parent=gene4203;Note=with IlvB catalyzes the formation of 2-acetolactate from pyruvate%2C the small subunit is required for full activity and valine sensitivity%3B E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates%2C valine sensitivity and affinity for cofactors%3B also known as acetolactate synthase small subunit;Dbxref=Genbank:YP_002405059.1,GeneID:7147905;gbkey=CDS;product=acetolactate synthase 1 regulatory subunit;protein_id=YP_002405059.1;transl_table=11
NC_011748.1	RefSeq	gene	4226116	4227804	.	-	.	ID=gene4204;Name=ilvB;Dbxref=GeneID:7146559;gbkey=Gene;gene=ilvB;locus_tag=EC55989_4139
NC_011748.1	RefSeq	CDS	4226116	4227804	.	-	0	ID=cds3913;Name=YP_002405060.1;Parent=gene4204;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 2989782%2C 85242083%2C 92380929%2C 2989781%3B Product type e : enzyme;Dbxref=Genbank:YP_002405060.1,GeneID:7146559;gbkey=CDS;product=acetolactate synthase catalytic subunit;protein_id=YP_002405060.1;transl_table=11
NC_011748.1	RefSeq	gene	4227910	4228008	.	-	.	ID=gene4205;Name=ivbL;Dbxref=GeneID:7145065;gbkey=Gene;gene=ivbL;locus_tag=EC55989_5072
NC_011748.1	RefSeq	CDS	4227910	4228008	.	-	0	ID=cds3914;Name=YP_002405062.1;Parent=gene4205;Note=Evidence 1c : Function experimentally demonstrated in the studied genus%3B Product type l : leader peptide;Dbxref=Genbank:YP_002405062.1,GeneID:7145065;gbkey=CDS;product=ilvB operon leader peptide;protein_id=YP_002405062.1;transl_table=11
NC_011748.1	RefSeq	gene	4228138	4228277	.	-	.	ID=gene4206;Name=istR;Dbxref=GeneID:7146642;gbkey=Gene;gene=istR;locus_tag=EC55989_misc_RNA_91
NC_011748.1	RefSeq	transcript	4228138	4228277	.	-	.	ID=rna170;Parent=gene4206;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 15620655%3B Product type n : RNA;Dbxref=GeneID:7146642;gbkey=misc_RNA;product=IstR
NC_011748.1	RefSeq	exon	4228138	4228277	.	-	.	ID=id339;Parent=rna170;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 15620655%3B Product type n : RNA;Dbxref=GeneID:7146642;gbkey=misc_RNA;product=IstR
NC_011748.1	RefSeq	gene	4228537	4228788	.	-	.	ID=gene4207;Name=EC55989_4141;Dbxref=GeneID:7146636;gbkey=Gene;locus_tag=EC55989_4141
NC_011748.1	RefSeq	CDS	4228537	4228788	.	-	0	ID=cds3915;Name=YP_002405063.1;Parent=gene4207;Note=Evidence 6 : Doubtful CDS;Dbxref=Genbank:YP_002405063.1,GeneID:7146636;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405063.1;transl_table=11
NC_011748.1	RefSeq	gene	4229081	4230265	.	+	.	ID=gene4208;Name=emrD;Dbxref=GeneID:7145066;gbkey=Gene;gene=emrD;locus_tag=EC55989_4142
NC_011748.1	RefSeq	CDS	4229081	4230265	.	+	0	ID=cds3916;Name=YP_002405064.1;Parent=gene4208;Note=multidrug efflux protein involved in adaptation to low energy shock;Dbxref=Genbank:YP_002405064.1,GeneID:7145066;gbkey=CDS;product=multidrug resistance protein D;protein_id=YP_002405064.1;transl_table=11
NC_011748.1	RefSeq	gene	4230273	4230770	.	-	.	ID=gene4209;Name=yidF;Dbxref=GeneID:7145991;gbkey=Gene;gene=yidF;locus_tag=EC55989_4143
NC_011748.1	RefSeq	CDS	4230273	4230770	.	-	0	ID=cds3917;Name=YP_002405065.1;Parent=gene4209;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pr :  regulator;Dbxref=Genbank:YP_002405065.1,GeneID:7145991;gbkey=CDS;product=DNA-binding transcriptional regulator;protein_id=YP_002405065.1;transl_table=11
NC_011748.1	RefSeq	gene	4230767	4231129	.	-	.	ID=gene4210;Name=yidG;Dbxref=GeneID:7149067;gbkey=Gene;gene=yidG;locus_tag=EC55989_4144
NC_011748.1	RefSeq	CDS	4230767	4231129	.	-	0	ID=cds3918;Name=YP_002405066.1;Parent=gene4210;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002405066.1,GeneID:7149067;gbkey=CDS;product=inner membrane protein;protein_id=YP_002405066.1;transl_table=11
NC_011748.1	RefSeq	gene	4231119	4231466	.	-	.	ID=gene4211;Name=yidH;Dbxref=GeneID:7149068;gbkey=Gene;gene=yidH;locus_tag=EC55989_4145
NC_011748.1	RefSeq	CDS	4231119	4231466	.	-	0	ID=cds3919;Name=YP_002405067.1;Parent=gene4211;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002405067.1,GeneID:7149068;gbkey=CDS;product=inner membrane protein;protein_id=YP_002405067.1;transl_table=11
NC_011748.1	RefSeq	gene	4231575	4232024	.	+	.	ID=gene4212;Name=yidI;Dbxref=GeneID:7149069;gbkey=Gene;gene=yidI;locus_tag=EC55989_4146
NC_011748.1	RefSeq	CDS	4231575	4232024	.	+	0	ID=cds3920;Name=YP_002405068.1;Parent=gene4212;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002405068.1,GeneID:7149069;gbkey=CDS;product=inner membrane protein;protein_id=YP_002405068.1;transl_table=11
NC_011748.1	RefSeq	gene	4232071	4233564	.	-	.	ID=gene4213;Name=yidJ;Dbxref=GeneID:7149070;gbkey=Gene;gene=yidJ;locus_tag=EC55989_4147
NC_011748.1	RefSeq	CDS	4232071	4233564	.	-	0	ID=cds3921;Name=YP_002405069.1;Parent=gene4213;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002405069.1,GeneID:7149070;gbkey=CDS;product=sulfatase%2Fphosphatase;protein_id=YP_002405069.1;transl_table=11
NC_011748.1	RefSeq	gene	4233561	4235276	.	-	.	ID=gene4214;Name=yidK;Dbxref=GeneID:7149071;gbkey=Gene;gene=yidK;locus_tag=EC55989_4148
NC_011748.1	RefSeq	CDS	4233561	4235276	.	-	0	ID=cds3922;Name=YP_002405070.1;Parent=gene4214;Note=uncharacterized member of the SSS superfamily of sodium-dependent solute transporters%3B unknown function;Dbxref=Genbank:YP_002405070.1,GeneID:7149071;gbkey=CDS;product=symporter YidK;protein_id=YP_002405070.1;transl_table=11
NC_011748.1	RefSeq	gene	4235413	4236336	.	+	.	ID=gene4215;Name=yidL;Dbxref=GeneID:7149072;gbkey=Gene;gene=yidL;locus_tag=EC55989_4149
NC_011748.1	RefSeq	CDS	4235413	4236336	.	+	0	ID=cds3923;Name=YP_002405071.1;Parent=gene4215;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pr :  regulator;Dbxref=Genbank:YP_002405071.1,GeneID:7149072;gbkey=CDS;product=DNA-binding transcriptional regulator;protein_id=YP_002405071.1;transl_table=11
NC_011748.1	RefSeq	gene	4236333	4236545	.	-	.	ID=gene4216;Name=EC55989_4150;Dbxref=GeneID:7149073;gbkey=Gene;locus_tag=EC55989_4150;pseudo=true
NC_011748.1	RefSeq	region	4236333	4236545	.	-	.	ID=id340;Note=fragment of 6-phospho-glucosidase %28part 2%29%3BEvidence 7 : Gene remnant%3B Product type e : enzyme;Dbxref=GeneID:7149073;gbkey=misc_feature
NC_011748.1	RefSeq	gene	4236509	4237147	.	-	.	ID=gene4217;Name=EC55989_4151;Dbxref=GeneID:7145067;gbkey=Gene;locus_tag=EC55989_4151;pseudo=true
NC_011748.1	RefSeq	region	4236509	4237147	.	-	.	ID=id341;Note=fragment of 6-phospho-glucosidase %28part 1%29%3BEvidence 7 : Gene remnant%3B Product type e : enzyme;Dbxref=GeneID:7145067;gbkey=misc_feature
NC_011748.1	RefSeq	gene	4237147	4239024	.	-	.	ID=gene4218;Name=EC55989_4152;Dbxref=GeneID:7145068;gbkey=Gene;locus_tag=EC55989_4152
NC_011748.1	RefSeq	CDS	4237147	4239024	.	-	0	ID=cds3924;Name=YP_002405072.1;Parent=gene4218;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002405072.1,GeneID:7145068;gbkey=CDS;product=PTS system alpha-glucoside-specific EIICB component;protein_id=YP_002405072.1;transl_table=11
NC_011748.1	RefSeq	gene	4239059	4239775	.	+	.	ID=gene4219;Name=yidP;Dbxref=GeneID:7145069;gbkey=Gene;gene=yidP;locus_tag=EC55989_4153
NC_011748.1	RefSeq	CDS	4239059	4239775	.	+	0	ID=cds3925;Name=YP_002405073.1;Parent=gene4219;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pr :  regulator;Dbxref=Genbank:YP_002405073.1,GeneID:7145069;gbkey=CDS;product=DNA-binding transcriptional regulator;protein_id=YP_002405073.1;transl_table=11
NC_011748.1	RefSeq	gene	4239772	4241433	.	-	.	ID=gene4220;Name=yidE;Dbxref=GeneID:7149074;gbkey=Gene;gene=yidE;locus_tag=EC55989_4154
NC_011748.1	RefSeq	CDS	4239772	4241433	.	-	0	ID=cds3926;Name=YP_002405074.1;Parent=gene4220;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 1356969%3B Product type pt :  transporter;Dbxref=Genbank:YP_002405074.1,GeneID:7149074;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405074.1;transl_table=11
NC_011748.1	RefSeq	gene	4241630	4242058	.	-	.	ID=gene4221;Name=ibpB;Dbxref=GeneID:7149066;gbkey=Gene;gene=ibpB;locus_tag=EC55989_4155
NC_011748.1	RefSeq	CDS	4241630	4242058	.	-	0	ID=cds3927;Name=YP_002405075.1;Parent=gene4221;Note=16 kDa heat shock protein B%3B associates with aggregated proteins%2C together with ibpA%2C to stabilize and protect them from irreversible denaturation and extensive proteolysis during heat shock and oxidative stress%3B ATP-independent;Dbxref=Genbank:YP_002405075.1,GeneID:7149066;gbkey=CDS;product=heat shock chaperone IbpB;protein_id=YP_002405075.1;transl_table=11
NC_011748.1	RefSeq	gene	4242170	4242583	.	-	.	ID=gene4222;Name=ibpA;Dbxref=GeneID:7146532;gbkey=Gene;gene=ibpA;locus_tag=EC55989_4156
NC_011748.1	RefSeq	CDS	4242170	4242583	.	-	0	ID=cds3928;Name=YP_002405076.1;Parent=gene4222;Note=with IbpB associates with aggregated proteins to stabilize and protect them from irreversible denaturation and extensive proteolysis during heat shock and oxidative stress;Dbxref=Genbank:YP_002405076.1,GeneID:7146532;gbkey=CDS;product=heat shock protein IbpA;protein_id=YP_002405076.1;transl_table=11
NC_011748.1	RefSeq	gene	4242889	4243221	.	+	.	ID=gene4223;Name=yidQ;Dbxref=GeneID:7146531;gbkey=Gene;gene=yidQ;locus_tag=EC55989_4157
NC_011748.1	RefSeq	CDS	4242889	4243221	.	+	0	ID=cds3929;Name=YP_002405077.1;Parent=gene4223;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002405077.1,GeneID:7146531;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405077.1;transl_table=11
NC_011748.1	RefSeq	gene	4243223	4244437	.	-	.	ID=gene4224;Name=yidR;Dbxref=GeneID:7149075;gbkey=Gene;gene=yidR;locus_tag=EC55989_4158
NC_011748.1	RefSeq	CDS	4243223	4244437	.	-	0	ID=cds3930;Name=YP_002405078.1;Parent=gene4224;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405078.1,GeneID:7149075;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405078.1;transl_table=11
NC_011748.1	RefSeq	gene	4244538	4245602	.	+	.	ID=gene4225;Name=cbrA;Dbxref=GeneID:7149076;gbkey=Gene;gene=cbrA;locus_tag=EC55989_4159
NC_011748.1	RefSeq	CDS	4244538	4245602	.	+	0	ID=cds3931;Name=YP_002405079.1;Parent=gene4225;Note=FAD%2FNAD%28P%29-binding domain;Dbxref=Genbank:YP_002405079.1,GeneID:7149076;gbkey=CDS;product=oxidoreductase;protein_id=YP_002405079.1;transl_table=11
NC_011748.1	RefSeq	gene	4245599	4246891	.	-	.	ID=gene4226;Name=dgoT;Dbxref=GeneID:7145669;gbkey=Gene;gene=dgoT;locus_tag=EC55989_4160
NC_011748.1	RefSeq	CDS	4245599	4246891	.	-	0	ID=cds3932;Name=YP_002405080.1;Parent=gene4226;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 79020349%3B Product type t : transporter;Dbxref=Genbank:YP_002405080.1,GeneID:7145669;gbkey=CDS;product=D-galactonate transporter;protein_id=YP_002405080.1;transl_table=11
NC_011748.1	RefSeq	gene	4247011	4248159	.	-	.	ID=gene4227;Name=dgoD;Dbxref=GeneID:7145899;gbkey=Gene;gene=dgoD;locus_tag=EC55989_4161
NC_011748.1	RefSeq	CDS	4247011	4248159	.	-	0	ID=cds3933;Name=YP_002405081.1;Parent=gene4227;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 79020349%3B Product type e : enzyme;Dbxref=Genbank:YP_002405081.1,GeneID:7145899;gbkey=CDS;product=galactonate dehydratase;protein_id=YP_002405081.1;transl_table=11
NC_011748.1	RefSeq	gene	4248156	4248773	.	-	.	ID=gene4228;Name=dgoA;Dbxref=GeneID:7145896;gbkey=Gene;gene=dgoA;locus_tag=EC55989_4162
NC_011748.1	RefSeq	CDS	4248156	4248773	.	-	0	ID=cds3934;Name=YP_002405082.1;Parent=gene4228;Note=catalyzes the formation of D-glyceraldehyde 3-phosphate and pyruvate from 2-dehydro-3-deoxy-D-galactonate 6-phosphate%3B functions in galactonate metabolism;Dbxref=Genbank:YP_002405082.1,GeneID:7145896;gbkey=CDS;product=2-dehydro-3-deoxy-6-phosphogalactonate aldolase;protein_id=YP_002405082.1;transl_table=11
NC_011748.1	RefSeq	gene	4248757	4249635	.	-	.	ID=gene4229;Name=dgoK;Dbxref=GeneID:7145895;gbkey=Gene;gene=dgoK;locus_tag=EC55989_4163
NC_011748.1	RefSeq	CDS	4248757	4249635	.	-	0	ID=cds3935;Name=YP_002405083.1;Parent=gene4229;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 79020349%3B Product type e : enzyme;Dbxref=Genbank:YP_002405083.1,GeneID:7145895;gbkey=CDS;product=2-oxo-3-deoxygalactonate kinase;protein_id=YP_002405083.1;transl_table=11
NC_011748.1	RefSeq	gene	4249632	4250321	.	-	.	ID=gene4230;Name=dgoR;Dbxref=GeneID:7145897;gbkey=Gene;gene=dgoR;locus_tag=EC55989_4164
NC_011748.1	RefSeq	CDS	4249632	4250321	.	-	0	ID=cds3936;Name=YP_002405084.1;Parent=gene4230;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 79020349%3B Product type pr :  regulator;Dbxref=Genbank:YP_002405084.1,GeneID:7145897;gbkey=CDS;product=DNA-binding transcriptional regulator;protein_id=YP_002405084.1;transl_table=11
NC_011748.1	RefSeq	gene	4250599	4251255	.	+	.	ID=gene4231;Name=yidX;Dbxref=GeneID:7145898;gbkey=Gene;gene=yidX;locus_tag=EC55989_4165
NC_011748.1	RefSeq	CDS	4250599	4251255	.	+	0	ID=cds3937;Name=YP_002405085.1;Parent=gene4231;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type lp : lipoprotein;Dbxref=Genbank:YP_002405085.1,GeneID:7145898;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405085.1;transl_table=11
NC_011748.1	RefSeq	gene	4251301	4252113	.	-	.	ID=gene4232;Name=yidA;Dbxref=GeneID:7149077;gbkey=Gene;gene=yidA;locus_tag=EC55989_4166
NC_011748.1	RefSeq	CDS	4251301	4252113	.	-	0	ID=cds3938;Name=YP_002405086.1;Parent=gene4232;Note=YidA%3B catalyzes the dephosphorylation of erythrose 4-phosphate %28preferred substrate%29%2C mannose 1-phosphate and p-nitrophenyl phosphate%3B hydrolyzes the alpha-D-glucose-1-phosphate but not the beta form%3B member of the haloacid dehalogenase-like hydrolases superfamily and Cof family of proteins;Dbxref=Genbank:YP_002405086.1,GeneID:7149077;gbkey=CDS;product=sugar phosphatase;protein_id=YP_002405086.1;transl_table=11
NC_011748.1	RefSeq	gene	4252228	4252626	.	-	.	ID=gene4233;Name=yidB;Dbxref=GeneID:7149062;gbkey=Gene;gene=yidB;locus_tag=EC55989_4167
NC_011748.1	RefSeq	CDS	4252228	4252626	.	-	0	ID=cds3939;Name=YP_002405087.1;Parent=gene4233;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405087.1,GeneID:7149062;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405087.1;transl_table=11
NC_011748.1	RefSeq	gene	4252866	4255280	.	-	.	ID=gene4234;Name=gyrB;Dbxref=GeneID:7149063;gbkey=Gene;gene=gyrB;locus_tag=EC55989_4168
NC_011748.1	RefSeq	CDS	4252866	4255280	.	-	0	ID=cds3940;Name=YP_002405088.1;Parent=gene4234;Note=negatively supercoils closed circular double-stranded DNA;Dbxref=Genbank:YP_002405088.1,GeneID:7149063;gbkey=CDS;product=DNA gyrase subunit B;protein_id=YP_002405088.1;transl_table=11
NC_011748.1	RefSeq	gene	4255309	4256382	.	-	.	ID=gene4235;Name=recF;Dbxref=GeneID:7146389;gbkey=Gene;gene=recF;locus_tag=EC55989_4169
NC_011748.1	RefSeq	CDS	4255309	4256382	.	-	0	ID=cds3941;Name=YP_002405089.1;Parent=gene4235;Note=Required for DNA replication%3B binds preferentially to single-stranded%2C linear DNA;Dbxref=Genbank:YP_002405089.1,GeneID:7146389;gbkey=CDS;product=recombination protein F;protein_id=YP_002405089.1;transl_table=11
NC_011748.1	RefSeq	gene	4256382	4257482	.	-	.	ID=gene4236;Name=dnaN;Dbxref=GeneID:7147361;gbkey=Gene;gene=dnaN;locus_tag=EC55989_4170
NC_011748.1	RefSeq	CDS	4256382	4257482	.	-	0	ID=cds3942;Name=YP_002405090.1;Parent=gene4236;Note=binds the polymerase to DNA and acts as a sliding clamp;Dbxref=Genbank:YP_002405090.1,GeneID:7147361;gbkey=CDS;product=DNA polymerase III subunit beta;protein_id=YP_002405090.1;transl_table=11
NC_011748.1	RefSeq	gene	4257487	4258890	.	-	.	ID=gene4237;Name=dnaA;Dbxref=GeneID:7145939;gbkey=Gene;gene=dnaA;locus_tag=EC55989_4171
NC_011748.1	RefSeq	CDS	4257487	4258890	.	-	0	ID=cds3943;Name=YP_002405091.1;Parent=gene4237;Note=binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication%3B can also affect transcription of multiple genes including itself.;Dbxref=Genbank:YP_002405091.1,GeneID:7145939;gbkey=CDS;product=chromosomal replication initiation protein;protein_id=YP_002405091.1;transl_table=11
NC_011748.1	RefSeq	gene	4259497	4259637	.	+	.	ID=gene4238;Name=rpmH;Dbxref=GeneID:7145932;gbkey=Gene;gene=rpmH;locus_tag=EC55989_4173
NC_011748.1	RefSeq	CDS	4259497	4259637	.	+	0	ID=cds3944;Name=YP_002405092.1;Parent=gene4238;Note=in Escherichia coli transcription of this gene is enhanced by polyamines;Dbxref=Genbank:YP_002405092.1,GeneID:7145932;gbkey=CDS;product=50S ribosomal protein L34;protein_id=YP_002405092.1;transl_table=11
NC_011748.1	RefSeq	gene	4259654	4260013	.	+	.	ID=gene4239;Name=rnpA;Dbxref=GeneID:7147493;gbkey=Gene;gene=rnpA;locus_tag=EC55989_4174
NC_011748.1	RefSeq	CDS	4259654	4260013	.	+	0	ID=cds3945;Name=YP_002405093.1;Parent=gene4239;Note=protein component of RNaseP which catalyzes the removal of the 5%27-leader sequence from pre-tRNA to produce the mature 5%27terminus%3B this enzyme also cleaves other RNA substrates;Dbxref=Genbank:YP_002405093.1,GeneID:7147493;gbkey=CDS;product=ribonuclease P;protein_id=YP_002405093.1;transl_table=11
NC_011748.1	RefSeq	gene	4259977	4260234	.	+	.	ID=gene4240;Name=yidD;Dbxref=GeneID:7147453;gbkey=Gene;gene=yidD;locus_tag=EC55989_4175
NC_011748.1	RefSeq	CDS	4259977	4260234	.	+	0	ID=cds3946;Name=YP_002405094.1;Parent=gene4240;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405094.1,GeneID:7147453;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405094.1;transl_table=11
NC_011748.1	RefSeq	gene	4260237	4261883	.	+	.	ID=gene4241;Name=yidC;Dbxref=GeneID:7149065;gbkey=Gene;gene=yidC;locus_tag=EC55989_4176
NC_011748.1	RefSeq	CDS	4260237	4261883	.	+	0	ID=cds3947;Name=YP_002405095.1;Parent=gene4241;Note=functions to insert inner membrane proteins into the IM in Escherichia coli%3B interacts with transmembrane segments%3B functions in both Sec-dependent and -independent membrane insertion%3B similar to Oxa1p in mitochondria;Dbxref=Genbank:YP_002405095.1,GeneID:7149065;gbkey=CDS;product=inner membrane protein translocase component YidC;protein_id=YP_002405095.1;transl_table=11
NC_011748.1	RefSeq	gene	4261989	4263353	.	+	.	ID=gene4242;Name=trmE;Dbxref=GeneID:7149064;gbkey=Gene;gene=trmE;locus_tag=EC55989_4177
NC_011748.1	RefSeq	CDS	4261989	4263353	.	+	0	ID=cds3948;Name=YP_002405096.1;Parent=gene4242;Note=in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine%2C which is found in the wobble position of some tRNAs and affects ribosomal frameshifting%3B shows potassium-dependent dimerization and GTP hydrolysis%3B also involved in regulation of glutamate-dependent acid resistance and activation of gadE;Dbxref=Genbank:YP_002405096.1,GeneID:7149064;gbkey=CDS;product=tRNA modification GTPase TrmE;protein_id=YP_002405096.1;transl_table=11
NC_011748.1	RefSeq	gene	4263596	4263670	.	+	.	ID=gene4243;Name=tnaC;Dbxref=GeneID:7147847;gbkey=Gene;gene=tnaC;locus_tag=EC55989_5073
NC_011748.1	RefSeq	CDS	4263596	4263670	.	+	0	ID=cds3949;Name=YP_002405097.1;Parent=gene4243;Note=Evidence 1c : Function experimentally demonstrated in the studied genus%3B Product type l : leader peptide;Dbxref=Genbank:YP_002405097.1,GeneID:7147847;gbkey=CDS;product=tryptophanase leader peptide;protein_id=YP_002405097.1;transl_table=11
NC_011748.1	RefSeq	gene	4263891	4265306	.	+	.	ID=gene4244;Name=tnaA;Dbxref=GeneID:7147810;gbkey=Gene;gene=tnaA;locus_tag=EC55989_4178
NC_011748.1	RefSeq	CDS	4263891	4265306	.	+	0	ID=cds3950;Name=YP_002405098.1;Parent=gene4244;Note=tryptophan indole-lyase%3B catalyzes the formation of indole and pyruvate from tryptophan;Dbxref=Genbank:YP_002405098.1,GeneID:7147810;gbkey=CDS;product=tryptophanase;protein_id=YP_002405098.1;transl_table=11
NC_011748.1	RefSeq	gene	4265397	4266644	.	+	.	ID=gene4245;Name=tnaB;Dbxref=GeneID:7147808;gbkey=Gene;gene=tnaB;locus_tag=EC55989_4179
NC_011748.1	RefSeq	CDS	4265397	4266644	.	+	0	ID=cds3951;Name=YP_002405099.1;Parent=gene4245;Note=tryptophan transporter of low affinity;Dbxref=Genbank:YP_002405099.1,GeneID:7147808;gbkey=CDS;product=tryptophan permease TnaB;protein_id=YP_002405099.1;transl_table=11
NC_011748.1	RefSeq	gene	4266777	4267952	.	+	.	ID=gene4246;Name=mdtL;Dbxref=GeneID:7147809;gbkey=Gene;gene=mdtL;locus_tag=EC55989_4180
NC_011748.1	RefSeq	CDS	4266777	4267952	.	+	0	ID=cds3952;Name=YP_002405100.1;Parent=gene4246;Note=Confers resistance to chloramphenicol;Dbxref=Genbank:YP_002405100.1,GeneID:7147809;gbkey=CDS;product=multidrug efflux system protein MdtL;protein_id=YP_002405100.1;transl_table=11
NC_011748.1	RefSeq	gene	4267927	4268886	.	+	.	ID=gene4247;Name=yidZ;Dbxref=GeneID:7146813;gbkey=Gene;gene=yidZ;locus_tag=EC55989_4181
NC_011748.1	RefSeq	CDS	4267927	4268886	.	+	0	ID=cds3953;Name=YP_002405101.1;Parent=gene4247;Note=Involved in anaerobic NO protection;Dbxref=Genbank:YP_002405101.1,GeneID:7146813;gbkey=CDS;product=DNA-binding transcriptional regulator YidZ;protein_id=YP_002405101.1;transl_table=11
NC_011748.1	RefSeq	gene	4269031	4269792	.	+	.	ID=gene4248;Name=yieE;Dbxref=GeneID:7149078;gbkey=Gene;gene=yieE;locus_tag=EC55989_4182
NC_011748.1	RefSeq	CDS	4269031	4269792	.	+	0	ID=cds3954;Name=YP_002405102.1;Parent=gene4248;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002405102.1,GeneID:7149078;gbkey=CDS;product=phosphopantetheinyl transferase;protein_id=YP_002405102.1;transl_table=11
NC_011748.1	RefSeq	gene	4269814	4270380	.	+	.	ID=gene4249;Name=yieF;Dbxref=GeneID:7149079;gbkey=Gene;gene=yieF;locus_tag=EC55989_4183
NC_011748.1	RefSeq	CDS	4269814	4270380	.	+	0	ID=cds3955;Name=YP_002405103.1;Parent=gene4249;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 14766567%3B Product type e : enzyme;Dbxref=Genbank:YP_002405103.1,GeneID:7149079;gbkey=CDS;product=chromate reductase%2C Class I%2C flavoprotein;protein_id=YP_002405103.1;transl_table=11
NC_011748.1	RefSeq	gene	4270434	4271771	.	-	.	ID=gene4250;Name=yieG;Dbxref=GeneID:7149080;gbkey=Gene;gene=yieG;locus_tag=EC55989_4184
NC_011748.1	RefSeq	CDS	4270434	4271771	.	-	0	ID=cds3956;Name=YP_002405104.1;Parent=gene4250;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002405104.1,GeneID:7149080;gbkey=CDS;product=inner membrane protein;protein_id=YP_002405104.1;transl_table=11
NC_011748.1	RefSeq	gene	4271938	4272603	.	+	.	ID=gene4251;Name=yieH;Dbxref=GeneID:7149081;gbkey=Gene;gene=yieH;locus_tag=EC55989_4185
NC_011748.1	RefSeq	CDS	4271938	4272603	.	+	0	ID=cds3957;Name=YP_002405105.1;Parent=gene4251;Note=YieH%3B catalyzes the dephosphorylation of phosphoenolpyruvate%2C AMP and p-nitrophenyl phosphate%3B purine and pyrimidine nucleotides are secondary substrates%3B member of the haloacid dehalogenase-like hydrolases superfamily;Dbxref=Genbank:YP_002405105.1,GeneID:7149081;gbkey=CDS;product=6-phosphogluconate phosphatase;protein_id=YP_002405105.1;transl_table=11
NC_011748.1	RefSeq	gene	4272670	4273143	.	+	.	ID=gene4252;Name=yieI;Dbxref=GeneID:7149082;gbkey=Gene;gene=yieI;locus_tag=EC55989_4186
NC_011748.1	RefSeq	CDS	4272670	4273143	.	+	0	ID=cds3958;Name=YP_002405106.1;Parent=gene4252;Note=might be involved in hypersensitivity to nitrofurzone;Dbxref=Genbank:YP_002405106.1,GeneID:7149082;gbkey=CDS;product=inner membrane protein;protein_id=YP_002405106.1;transl_table=11
NC_011748.1	RefSeq	gene	4273192	4273779	.	+	.	ID=gene4253;Name=cbrC;Dbxref=GeneID:7149083;gbkey=Gene;gene=cbrC;locus_tag=EC55989_4187
NC_011748.1	RefSeq	CDS	4273192	4273779	.	+	0	ID=cds3959;Name=YP_002405107.1;Parent=gene4253;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405107.1,GeneID:7149083;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405107.1;transl_table=11
NC_011748.1	RefSeq	gene	4273841	4274563	.	-	.	ID=gene4254;Name=yieK;Dbxref=GeneID:7145670;gbkey=Gene;gene=yieK;locus_tag=EC55989_4188
NC_011748.1	RefSeq	CDS	4273841	4274563	.	-	0	ID=cds3960;Name=YP_002405108.1;Parent=gene4254;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002405108.1,GeneID:7145670;gbkey=CDS;product=6-phosphogluconolactonase;protein_id=YP_002405108.1;transl_table=11
NC_011748.1	RefSeq	gene	4274578	4275774	.	-	.	ID=gene4255;Name=yieL;Dbxref=GeneID:7149084;gbkey=Gene;gene=yieL;locus_tag=EC55989_4189
NC_011748.1	RefSeq	CDS	4274578	4275774	.	-	0	ID=cds3961;Name=YP_002405109.1;Parent=gene4255;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002405109.1,GeneID:7149084;gbkey=CDS;product=xylanase;protein_id=YP_002405109.1;transl_table=11
NC_011748.1	RefSeq	gene	4275774	4277390	.	-	.	ID=gene4256;Name=bglH;Dbxref=GeneID:7149085;gbkey=Gene;gene=bglH;locus_tag=EC55989_4190
NC_011748.1	RefSeq	CDS	4275774	4277390	.	-	0	ID=cds3962;Name=YP_002405110.1;Parent=gene4256;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 10027967%3B Product type t : transporter;Dbxref=Genbank:YP_002405110.1,GeneID:7149085;gbkey=CDS;product=carbohydrate-specific outer membrane porin%2C cryptic;protein_id=YP_002405110.1;transl_table=11
NC_011748.1	RefSeq	gene	4277476	4278870	.	-	.	ID=gene4257;Name=bglB;Dbxref=GeneID:7145621;gbkey=Gene;gene=bglB;locus_tag=EC55989_4191
NC_011748.1	RefSeq	CDS	4277476	4278870	.	-	0	ID=cds3963;Name=YP_002405111.1;Parent=gene4257;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 87222180%2C 88297127%2C 92334140%2C 3034860%2C 3309161%3B Product type e : enzyme;Dbxref=Genbank:YP_002405111.1,GeneID:7145621;gbkey=CDS;product=cryptic phospho-beta-glucosidase B;protein_id=YP_002405111.1;transl_table=11
NC_011748.1	RefSeq	gene	4278889	4280766	.	-	.	ID=gene4258;Name=bglF;Dbxref=GeneID:7145617;gbkey=Gene;gene=bglF;locus_tag=EC55989_4192
NC_011748.1	RefSeq	CDS	4278889	4280766	.	-	0	ID=cds3964;Name=YP_002405112.1;Parent=gene4258;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;Dbxref=Genbank:YP_002405112.1,GeneID:7145617;gbkey=CDS;product=PTS system beta-glucoside-specific transporter subunit IIABC;protein_id=YP_002405112.1;transl_table=11
NC_011748.1	RefSeq	gene	4280900	4281277	.	-	.	ID=gene4259;Name=bglG;Dbxref=GeneID:7145618;gbkey=Gene;gene=bglG;locus_tag=EC55989_4193;pseudo=true
NC_011748.1	RefSeq	region	4280900	4281277	.	-	.	ID=id342;Note=fragment of transcriptional antiterminator of the bgl operon %28part 2%29%3BEvidence 7 : Gene remnant%3B Product type r : regulator;Dbxref=GeneID:7145618;gbkey=misc_feature
NC_011748.1	RefSeq	gene	4281293	4281760	.	-	.	ID=gene4260;Name=bglG;Dbxref=GeneID:7145619;gbkey=Gene;gene=bglG;locus_tag=EC55989_4194;pseudo=true
NC_011748.1	RefSeq	region	4281293	4281760	.	-	.	ID=id343;Note=fragment of transcriptional antiterminator of the bgl operon %28part 1%29%3BEvidence 7 : Gene remnant%3B Product type r : regulator;Dbxref=GeneID:7145619;gbkey=misc_feature
NC_011748.1	RefSeq	gene	4282022	4282747	.	-	.	ID=gene4261;Name=phoU;Dbxref=GeneID:7145620;gbkey=Gene;gene=phoU;locus_tag=EC55989_4195
NC_011748.1	RefSeq	CDS	4282022	4282747	.	-	0	ID=cds3965;Name=YP_002405113.1;Parent=gene4261;Note=regulates several genes involved in high affinity phosphate uptake%3B under conditions of high phosphate concentrations downregulates the PHO regulon;Dbxref=Genbank:YP_002405113.1,GeneID:7145620;gbkey=CDS;product=transcriptional regulator PhoU;protein_id=YP_002405113.1;transl_table=11
NC_011748.1	RefSeq	gene	4282762	4283535	.	-	.	ID=gene4262;Name=pstB;Dbxref=GeneID:7147186;gbkey=Gene;gene=pstB;locus_tag=EC55989_4196
NC_011748.1	RefSeq	CDS	4282762	4283535	.	-	0	ID=cds3966;Name=YP_002405114.1;Parent=gene4262;Note=ATP-binding protein%3B PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation;Dbxref=Genbank:YP_002405114.1,GeneID:7147186;gbkey=CDS;product=phosphate transporter ATP-binding protein;protein_id=YP_002405114.1;transl_table=11
NC_011748.1	RefSeq	gene	4283626	4284516	.	-	.	ID=gene4263;Name=pstA;Dbxref=GeneID:7147278;gbkey=Gene;gene=pstA;locus_tag=EC55989_4197
NC_011748.1	RefSeq	CDS	4283626	4284516	.	-	0	ID=cds3967;Name=YP_002405115.1;Parent=gene4263;Note=Part of the ABC transporter complex PstABCS responsible for inorganic phosphate %28Pi%29 uptake under Pi starvation conditions;Dbxref=Genbank:YP_002405115.1,GeneID:7147278;gbkey=CDS;product=phosphate transporter permease subunit PtsA;protein_id=YP_002405115.1;transl_table=11
NC_011748.1	RefSeq	gene	4284516	4285475	.	-	.	ID=gene4264;Name=pstC;Dbxref=GeneID:7147277;gbkey=Gene;gene=pstC;locus_tag=EC55989_4198
NC_011748.1	RefSeq	CDS	4284516	4285475	.	-	0	ID=cds3968;Name=YP_002405116.1;Parent=gene4264;Note=part of the ATP-dependent phosphate uptake system PstABCS responsible for inorganic phosphate %28Pi%29 uptake under Pi starvation conditions;Dbxref=Genbank:YP_002405116.1,GeneID:7147277;gbkey=CDS;product=phosphate transporter permease subunit PstC;protein_id=YP_002405116.1;transl_table=11
NC_011748.1	RefSeq	gene	4285562	4286602	.	-	.	ID=gene4265;Name=pstS;Dbxref=GeneID:7147279;gbkey=Gene;gene=pstS;locus_tag=EC55989_4199
NC_011748.1	RefSeq	CDS	4285562	4286602	.	-	0	ID=cds3969;Name=YP_002405117.1;Parent=gene4265;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 90133909%2C 2215649%2C 6321434%2C 6365894%2C 9228942%2C 9298646%2C 9671506%3B Product type t : transporter;Dbxref=Genbank:YP_002405117.1,GeneID:7147279;gbkey=CDS;product=phosphate ABC transporter substrate-binding protein;protein_id=YP_002405117.1;transl_table=11
NC_011748.1	RefSeq	gene	4286850	4287923	.	-	.	ID=gene4266;Name=lpfD;Dbxref=GeneID:7147280;gbkey=Gene;gene=lpfD;locus_tag=EC55989_4200
NC_011748.1	RefSeq	CDS	4286850	4287923	.	-	0	ID=cds3970;Name=YP_002405118.1;Parent=gene4266;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 12438351%2C 7721701%2C 16128397%3B Product type ps :  structure;Dbxref=Genbank:YP_002405118.1,GeneID:7147280;gbkey=CDS;product=fimbrial protein LpfD%3B adhesin;protein_id=YP_002405118.1;transl_table=11
NC_011748.1	RefSeq	gene	4287934	4290456	.	-	.	ID=gene4267;Name=lpfC;Dbxref=GeneID:7146729;gbkey=Gene;gene=lpfC;locus_tag=EC55989_4201
NC_011748.1	RefSeq	CDS	4287934	4290456	.	-	0	ID=cds3971;Name=YP_002405119.1;Parent=gene4267;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 7721701%2C 16128397%3B Product type pt :  transporter;Dbxref=Genbank:YP_002405119.1,GeneID:7146729;gbkey=CDS;product=fimbrial usher;protein_id=YP_002405119.1;transl_table=11
NC_011748.1	RefSeq	gene	4290481	4291212	.	-	.	ID=gene4268;Name=lfpB;Dbxref=GeneID:7146727;gbkey=Gene;gene=lfpB;locus_tag=EC55989_4202
NC_011748.1	RefSeq	CDS	4290481	4291212	.	-	0	ID=cds3972;Name=YP_002405120.1;Parent=gene4268;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 16128397%2C 12438351%3B Product type pc :  carrier;Dbxref=Genbank:YP_002405120.1,GeneID:7146727;gbkey=CDS;product=fimbrial chaperone protein;protein_id=YP_002405120.1;transl_table=11
NC_011748.1	RefSeq	gene	4291260	4291832	.	-	.	ID=gene4269;Name=lpfA;Dbxref=GeneID:7146697;gbkey=Gene;gene=lpfA;locus_tag=EC55989_4203
NC_011748.1	RefSeq	CDS	4291260	4291832	.	-	0	ID=cds3973;Name=YP_002405121.1;Parent=gene4269;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 16125910%2C 12438351%3B Product type ps :  structure;Dbxref=Genbank:YP_002405121.1,GeneID:7146697;gbkey=CDS;product=major fimbrial subunit;protein_id=YP_002405121.1;transl_table=11
NC_011748.1	RefSeq	gene	4292134	4293963	.	-	.	ID=gene4270;Name=glmS;Dbxref=GeneID:7146724;gbkey=Gene;gene=glmS;locus_tag=EC55989_4204
NC_011748.1	RefSeq	CDS	4292134	4293963	.	-	0	ID=cds3974;Name=YP_002405122.1;Parent=gene4270;Note=Catalyzes the first step in hexosamine metabolism%2C converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source;Dbxref=Genbank:YP_002405122.1,GeneID:7146724;gbkey=CDS;product=glucosamine--fructose-6-phosphate aminotransferase;protein_id=YP_002405122.1;transl_table=11
NC_011748.1	RefSeq	gene	4294125	4295495	.	-	.	ID=gene4271;Name=glmU;Dbxref=GeneID:7146300;gbkey=Gene;gene=glmU;locus_tag=EC55989_4205
NC_011748.1	RefSeq	CDS	4294125	4295495	.	-	0	ID=cds3975;Name=YP_002405123.1;Parent=gene4271;Note=forms a homotrimer%3B catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc%3B function in cell wall synthesis;Dbxref=Genbank:YP_002405123.1,GeneID:7146300;gbkey=CDS;product=bifunctional N-acetylglucosamine-1-phosphate uridyltransferase%2Fglucosamine-1-phosphate acetyltransferase;protein_id=YP_002405123.1;transl_table=11
NC_011748.1	RefSeq	gene	4295846	4296265	.	-	.	ID=gene4272;Name=atpC;Dbxref=GeneID:7146301;gbkey=Gene;gene=atpC;locus_tag=EC55989_4206
NC_011748.1	RefSeq	CDS	4295846	4296265	.	-	0	ID=cds3976;Name=YP_002405124.1;Parent=gene4272;Note=part of catalytic core of ATP synthase%3B alpha%283%29beta%283%29gamma%281%29delta%281%29epsilon%281%29%3B involved in producing ATP from ADP in the presence of the proton motive force across the membrane;Dbxref=Genbank:YP_002405124.1,GeneID:7146301;gbkey=CDS;product=ATP synthase F0F1 subunit epsilon;protein_id=YP_002405124.1;transl_table=11
NC_011748.1	RefSeq	gene	4296286	4297668	.	-	.	ID=gene4273;Name=atpD;Dbxref=GeneID:7145582;gbkey=Gene;gene=atpD;locus_tag=EC55989_4207
NC_011748.1	RefSeq	CDS	4296286	4297668	.	-	0	ID=cds3977;Name=YP_002405125.1;Parent=gene4273;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit;Dbxref=Genbank:YP_002405125.1,GeneID:7145582;gbkey=CDS;product=ATP synthase F0F1 subunit beta;protein_id=YP_002405125.1;transl_table=11
NC_011748.1	RefSeq	gene	4297695	4298558	.	-	.	ID=gene4274;Name=atpG;Dbxref=GeneID:7145583;gbkey=Gene;gene=atpG;locus_tag=EC55989_4208
NC_011748.1	RefSeq	CDS	4297695	4298558	.	-	0	ID=cds3978;Name=YP_002405126.1;Parent=gene4274;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit;Dbxref=Genbank:YP_002405126.1,GeneID:7145583;gbkey=CDS;product=ATP synthase F0F1 subunit gamma;protein_id=YP_002405126.1;transl_table=11
NC_011748.1	RefSeq	gene	4298609	4300150	.	-	.	ID=gene4275;Name=atpA;Dbxref=GeneID:7145586;gbkey=Gene;gene=atpA;locus_tag=EC55989_4209
NC_011748.1	RefSeq	CDS	4298609	4300150	.	-	0	ID=cds3979;Name=YP_002405127.1;Parent=gene4275;Note=produces ATP from ADP in the presence of a proton gradient across the membrane%3B the alpha chain is a catalytic subunit;Dbxref=Genbank:YP_002405127.1,GeneID:7145586;gbkey=CDS;product=ATP synthase F0F1 subunit alpha;protein_id=YP_002405127.1;transl_table=11
NC_011748.1	RefSeq	gene	4300163	4300696	.	-	.	ID=gene4276;Name=atpH;Dbxref=GeneID:7145580;gbkey=Gene;gene=atpH;locus_tag=EC55989_4210
NC_011748.1	RefSeq	CDS	4300163	4300696	.	-	0	ID=cds3980;Name=YP_002405128.1;Parent=gene4276;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane%3B the delta subunit is part of the catalytic core of the ATP synthase complex;Dbxref=Genbank:YP_002405128.1,GeneID:7145580;gbkey=CDS;product=ATP synthase F0F1 subunit delta;protein_id=YP_002405128.1;transl_table=11
NC_011748.1	RefSeq	gene	4300711	4301181	.	-	.	ID=gene4277;Name=atpF;Dbxref=GeneID:7145587;gbkey=Gene;gene=atpF;locus_tag=EC55989_4211
NC_011748.1	RefSeq	CDS	4300711	4301181	.	-	0	ID=cds3981;Name=YP_002405129.1;Parent=gene4277;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel.;Dbxref=Genbank:YP_002405129.1,GeneID:7145587;gbkey=CDS;product=ATP synthase F0F1 subunit B;protein_id=YP_002405129.1;transl_table=11
NC_011748.1	RefSeq	gene	4301243	4301482	.	-	.	ID=gene4278;Name=atpE;Dbxref=GeneID:7145585;gbkey=Gene;gene=atpE;locus_tag=EC55989_4212
NC_011748.1	RefSeq	CDS	4301243	4301482	.	-	0	ID=cds3982;Name=YP_002405130.1;Parent=gene4278;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0;Dbxref=Genbank:YP_002405130.1,GeneID:7145585;gbkey=CDS;product=ATP synthase F0F1 subunit C;protein_id=YP_002405130.1;transl_table=11
NC_011748.1	RefSeq	gene	4301529	4302344	.	-	.	ID=gene4279;Name=atpB;Dbxref=GeneID:7145584;gbkey=Gene;gene=atpB;locus_tag=EC55989_4213
NC_011748.1	RefSeq	CDS	4301529	4302344	.	-	0	ID=cds3983;Name=YP_002405131.1;Parent=gene4279;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0;Dbxref=Genbank:YP_002405131.1,GeneID:7145584;gbkey=CDS;product=ATP synthase F0F1 subunit A;protein_id=YP_002405131.1;transl_table=11
NC_011748.1	RefSeq	gene	4302353	4302733	.	-	.	ID=gene4280;Name=atpI;Dbxref=GeneID:7145581;gbkey=Gene;gene=atpI;locus_tag=EC55989_4214
NC_011748.1	RefSeq	CDS	4302353	4302733	.	-	0	ID=cds3984;Name=YP_002405132.1;Parent=gene4280;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit I associates with the membrane and may be involved with cation translocation;Dbxref=Genbank:YP_002405132.1,GeneID:7145581;gbkey=CDS;product=F0F1 ATP synthase subunit I;protein_id=YP_002405132.1;transl_table=11
NC_011748.1	RefSeq	gene	4303350	4303973	.	-	.	ID=gene4281;Name=gidB;Dbxref=GeneID:7145588;gbkey=Gene;gene=gidB;locus_tag=EC55989_4215
NC_011748.1	RefSeq	CDS	4303350	4303973	.	-	0	ID=cds3985;Name=YP_002405133.1;Parent=gene4281;Note=glucose-inhibited division protein B%3B SAM-dependent methyltransferase%3B methylates the N7 position of guanosine in position 527 of 16S rRNA;Dbxref=Genbank:YP_002405133.1,GeneID:7145588;gbkey=CDS;product=16S rRNA methyltransferase GidB;protein_id=YP_002405133.1;transl_table=11
NC_011748.1	RefSeq	gene	4304037	4305926	.	-	.	ID=gene4282;Name=gidA;Dbxref=GeneID:7146284;gbkey=Gene;gene=gidA;locus_tag=EC55989_4216
NC_011748.1	RefSeq	CDS	4304037	4305926	.	-	0	ID=cds3986;Name=YP_002405134.1;Parent=gene4282;Note=GidA%3B glucose-inhibited cell division protein A%3B involved in the 5-carboxymethylaminomethyl modification %28mnm%285%29s%282%29U%29 of the wobble uridine base in some tRNAs;Dbxref=Genbank:YP_002405134.1,GeneID:7146284;gbkey=CDS;product=tRNA uridine 5-carboxymethylaminomethyl modification protein GidA;protein_id=YP_002405134.1;transl_table=11
NC_011748.1	RefSeq	gene	4306305	4306748	.	-	.	ID=gene4283;Name=mioC;Dbxref=GeneID:7146283;gbkey=Gene;gene=mioC;locus_tag=EC55989_4217
NC_011748.1	RefSeq	CDS	4306305	4306748	.	-	0	ID=cds3987;Name=YP_002405135.1;Parent=gene4283;Note=An electron-transfer protein%3B flavodoxin binds one FMN molecule%2C which serves as a redox-active prosthetic group;Dbxref=Genbank:YP_002405135.1,GeneID:7146283;gbkey=CDS;product=flavodoxin;protein_id=YP_002405135.1;transl_table=11
NC_011748.1	RefSeq	gene	4306838	4307296	.	-	.	ID=gene4284;Name=asnC;Dbxref=GeneID:7146860;gbkey=Gene;gene=asnC;locus_tag=EC55989_4218
NC_011748.1	RefSeq	CDS	4306838	4307296	.	-	0	ID=cds3988;Name=YP_002405136.1;Parent=gene4284;Note=transcriptional repressor of asnA which codes for aspartate-ammonia ligase;Dbxref=Genbank:YP_002405136.1,GeneID:7146860;gbkey=CDS;product=DNA-binding transcriptional regulator AsnC;protein_id=YP_002405136.1;transl_table=11
NC_011748.1	RefSeq	gene	4307448	4308440	.	+	.	ID=gene4285;Name=asnA;Dbxref=GeneID:7145569;gbkey=Gene;gene=asnA;locus_tag=EC55989_4219
NC_011748.1	RefSeq	CDS	4307448	4308440	.	+	0	ID=cds3989;Name=YP_002405137.1;Parent=gene4285;Note=catalyzes the formation of asparagine from aspartate and ammonia;Dbxref=Genbank:YP_002405137.1,GeneID:7145569;gbkey=CDS;product=asparagine synthetase AsnA;protein_id=YP_002405137.1;transl_table=11
NC_011748.1	RefSeq	gene	4308445	4309896	.	-	.	ID=gene4286;Name=yieM;Dbxref=GeneID:7145567;gbkey=Gene;gene=yieM;locus_tag=EC55989_4220
NC_011748.1	RefSeq	CDS	4308445	4309896	.	-	0	ID=cds3990;Name=YP_002405138.1;Parent=gene4286;Note=contains a von Willibrand factor type A domain%3B stimulates the ATPase activity of RavA;Dbxref=Genbank:YP_002405138.1,GeneID:7145567;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405138.1;transl_table=11
NC_011748.1	RefSeq	gene	4309890	4311386	.	-	.	ID=gene4287;Name=ravA;Dbxref=GeneID:7149086;gbkey=Gene;gene=ravA;locus_tag=EC55989_4221
NC_011748.1	RefSeq	CDS	4309890	4311386	.	-	0	ID=cds3991;Name=YP_002405139.1;Parent=gene4287;Note=interacts with LdcI%2C lysine decarboxylase%3B may be active in late log%2F early stationary phase;Dbxref=Genbank:YP_002405139.1,GeneID:7149086;gbkey=CDS;product=regulatory ATPase RavA;protein_id=YP_002405139.1;transl_table=11
NC_011748.1	RefSeq	gene	4311609	4313477	.	+	.	ID=gene4288;Name=trkD;Dbxref=GeneID:7147337;gbkey=Gene;gene=trkD;locus_tag=EC55989_4222
NC_011748.1	RefSeq	CDS	4311609	4313477	.	+	0	ID=cds3992;Name=YP_002405140.1;Parent=gene4288;Note=Responsible for the low-affinity transport of potassium into the cell%3B involved in potassium ion uptake under hyper-osmotic stress at a low pH;Dbxref=Genbank:YP_002405140.1,GeneID:7147337;gbkey=CDS;product=potassium transport protein Kup;protein_id=YP_002405140.1;transl_table=11
NC_011748.1	RefSeq	gene	4313644	4314063	.	+	.	ID=gene4289;Name=rbsD;Dbxref=GeneID:7147842;gbkey=Gene;gene=rbsD;locus_tag=EC55989_4223
NC_011748.1	RefSeq	CDS	4313644	4314063	.	+	0	ID=cds3993;Name=YP_002405141.1;Parent=gene4289;Note=cytoplasmic mutarotase that catalyzes the conversion between beta-pyran and beta-furan forms of D-ribose%3B RbsD is required for efficient ribose utilization in E. coli%3B rbsD-mutant E. coli strains are unable to use ribose as a sole carbon source;Dbxref=Genbank:YP_002405141.1,GeneID:7147842;gbkey=CDS;product=D-ribose pyranase;protein_id=YP_002405141.1;transl_table=11
NC_011748.1	RefSeq	gene	4314071	4315576	.	+	.	ID=gene4290;Name=rbsA;Dbxref=GeneID:7147344;gbkey=Gene;gene=rbsA;locus_tag=EC55989_4224
NC_011748.1	RefSeq	CDS	4314071	4315576	.	+	0	ID=cds3994;Name=YP_002405142.1;Parent=gene4290;Note=with RbsBCD acts to import ribose into the cell%3B RbsA contains 2 ATP-binding domain;Dbxref=Genbank:YP_002405142.1,GeneID:7147344;gbkey=CDS;product=D-ribose transporter ATP-binding protein;protein_id=YP_002405142.1;transl_table=11
NC_011748.1	RefSeq	gene	4315581	4316546	.	+	.	ID=gene4291;Name=rbsC;Dbxref=GeneID:7147341;gbkey=Gene;gene=rbsC;locus_tag=EC55989_4225
NC_011748.1	RefSeq	CDS	4315581	4316546	.	+	0	ID=cds3995;Name=YP_002405143.1;Parent=gene4291;Note=functions to transport ribose at high affinity%3B forms a complex with RbsA2C2B;Dbxref=Genbank:YP_002405143.1,GeneID:7147341;gbkey=CDS;product=ribose ABC transporter permease;protein_id=YP_002405143.1;transl_table=11
NC_011748.1	RefSeq	gene	4316571	4317461	.	+	.	ID=gene4292;Name=rbsB;Dbxref=GeneID:7147343;gbkey=Gene;gene=rbsB;locus_tag=EC55989_4226
NC_011748.1	RefSeq	CDS	4316571	4317461	.	+	0	ID=cds3996;Name=YP_002405144.1;Parent=gene4292;Note=periplasmic substrate-binding component of the ATP-dependent ribose transport system;Dbxref=Genbank:YP_002405144.1,GeneID:7147343;gbkey=CDS;product=D-ribose transporter subunit RbsB;protein_id=YP_002405144.1;transl_table=11
NC_011748.1	RefSeq	gene	4317587	4318516	.	+	.	ID=gene4293;Name=rbsK;Dbxref=GeneID:7147342;gbkey=Gene;gene=rbsK;locus_tag=EC55989_4227
NC_011748.1	RefSeq	CDS	4317587	4318516	.	+	0	ID=cds3997;Name=YP_002405145.1;Parent=gene4293;Note=catalyzes the formation of D-ribose 5-phosphate from ribose;Dbxref=Genbank:YP_002405145.1,GeneID:7147342;gbkey=CDS;product=ribokinase;protein_id=YP_002405145.1;transl_table=11
NC_011748.1	RefSeq	gene	4318520	4319512	.	+	.	ID=gene4294;Name=rbsR;Dbxref=GeneID:7147345;gbkey=Gene;gene=rbsR;locus_tag=EC55989_4228
NC_011748.1	RefSeq	CDS	4318520	4319512	.	+	0	ID=cds3998;Name=YP_002405146.1;Parent=gene4294;Note=DNA-binding transcriptional repressor of ribose metabolism;Dbxref=Genbank:YP_002405146.1,GeneID:7147345;gbkey=CDS;product=transcriptional repressor RbsR;protein_id=YP_002405146.1;transl_table=11
NC_011748.1	RefSeq	gene	4319478	4320905	.	-	.	ID=gene4295;Name=hsrA;Dbxref=GeneID:7147346;gbkey=Gene;gene=hsrA;locus_tag=EC55989_4229
NC_011748.1	RefSeq	CDS	4319478	4320905	.	-	0	ID=cds3999;Name=YP_002405147.1;Parent=gene4295;Note=Evidence 2b : Function of strongly homologous gene%3B PubMedId : 20218988%2C 12107133%3B Product type t : transporter;Dbxref=Genbank:YP_002405147.1,GeneID:7147346;gbkey=CDS;product=multidrug or homocysteine efflux system;protein_id=YP_002405147.1;transl_table=11
NC_011748.1	RefSeq	gene	4320928	4321620	.	-	.	ID=gene4296;Name=yieP;Dbxref=GeneID:7146472;gbkey=Gene;gene=yieP;locus_tag=EC55989_4230
NC_011748.1	RefSeq	CDS	4320928	4321620	.	-	0	ID=cds4000;Name=YP_002405148.1;Parent=gene4296;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pr :  regulator;Dbxref=Genbank:YP_002405148.1,GeneID:7146472;gbkey=CDS;product=transcriptional regulator;protein_id=YP_002405148.1;transl_table=11
NC_011748.1	RefSeq	gene	4322101	4323642	.	+	.	ID=gene4297;Name=EC55989_16S_4;Dbxref=GeneID:7149087;gbkey=Gene;locus_tag=EC55989_16S_4
NC_011748.1	RefSeq	rRNA	4322101	4323642	.	+	.	ID=rna171;Parent=gene4297;Dbxref=GeneID:7149087;gbkey=rRNA;product=ribosomal RNA 16S
NC_011748.1	RefSeq	exon	4322101	4323642	.	+	.	ID=id344;Parent=rna171;Dbxref=GeneID:7149087;gbkey=rRNA;product=ribosomal RNA 16S
NC_011748.1	RefSeq	gene	4323728	4323803	.	+	.	ID=gene4298;Name=EC55989_tRNA37;Dbxref=GeneID:7144635;gbkey=Gene;locus_tag=EC55989_tRNA37
NC_011748.1	RefSeq	tRNA	4323728	4323803	.	+	.	ID=rna172;Dbxref=GeneID:7144635;gbkey=tRNA;product=tRNA-Glu
NC_011748.1	RefSeq	exon	4323728	4323803	.	+	.	ID=id345;Parent=rna172;Dbxref=GeneID:7144635;gbkey=tRNA;product=tRNA-Glu
NC_011748.1	RefSeq	gene	4323997	4326900	.	+	.	ID=gene4299;Name=EC55989_23S_4;Dbxref=GeneID:7145347;gbkey=Gene;locus_tag=EC55989_23S_4
NC_011748.1	RefSeq	rRNA	4323997	4326900	.	+	.	ID=rna173;Parent=gene4299;Dbxref=GeneID:7145347;gbkey=rRNA;product=ribosomal RNA 23S
NC_011748.1	RefSeq	exon	4323997	4326900	.	+	.	ID=id346;Parent=rna173;Dbxref=GeneID:7145347;gbkey=rRNA;product=ribosomal RNA 23S
NC_011748.1	RefSeq	gene	4326993	4327112	.	+	.	ID=gene4300;Name=EC55989_5S_5;Dbxref=GeneID:7144762;gbkey=Gene;locus_tag=EC55989_5S_5
NC_011748.1	RefSeq	rRNA	4326993	4327112	.	+	.	ID=rna174;Parent=gene4300;Dbxref=GeneID:7144762;gbkey=rRNA;product=ribosomal RNA 5S
NC_011748.1	RefSeq	exon	4326993	4327112	.	+	.	ID=id347;Parent=rna174;Dbxref=GeneID:7144762;gbkey=rRNA;product=ribosomal RNA 5S
NC_011748.1	RefSeq	gene	4327165	4327241	.	+	.	ID=gene4301;Name=EC55989_tRNA38;Dbxref=GeneID:7145291;gbkey=Gene;locus_tag=EC55989_tRNA38
NC_011748.1	RefSeq	tRNA	4327165	4327241	.	+	.	ID=rna175;Dbxref=GeneID:7145291;gbkey=tRNA;product=tRNA-Asp
NC_011748.1	RefSeq	exon	4327165	4327241	.	+	.	ID=id348;Parent=rna175;Dbxref=GeneID:7145291;gbkey=tRNA;product=tRNA-Asp
NC_011748.1	RefSeq	gene	4327250	4327325	.	+	.	ID=gene4302;Name=EC55989_tRNA39;Dbxref=GeneID:7145348;gbkey=Gene;locus_tag=EC55989_tRNA39
NC_011748.1	RefSeq	tRNA	4327250	4327325	.	+	.	ID=rna176;Dbxref=GeneID:7145348;gbkey=tRNA;product=tRNA-Trp
NC_011748.1	RefSeq	exon	4327250	4327325	.	+	.	ID=id349;Parent=rna176;Dbxref=GeneID:7145348;gbkey=tRNA;product=tRNA-Trp
NC_011748.1	RefSeq	gene	4327421	4328260	.	-	.	ID=gene4303;Name=hdfR;Dbxref=GeneID:7145349;gbkey=Gene;gene=hdfR;locus_tag=EC55989_4237
NC_011748.1	RefSeq	CDS	4327421	4328260	.	-	0	ID=cds4001;Name=YP_002405149.1;Parent=gene4303;Note=Negatively regulates the transcription of the flagellar master operon flhDC by binding to the upstream region of the operon;Dbxref=Genbank:YP_002405149.1,GeneID:7145349;gbkey=CDS;product=transcriptional regulator HdfR;protein_id=YP_002405149.1;transl_table=11
NC_011748.1	RefSeq	gene	4328379	4328717	.	+	.	ID=gene4304;Name=yifE;Dbxref=GeneID:7146404;gbkey=Gene;gene=yifE;locus_tag=EC55989_4238
NC_011748.1	RefSeq	CDS	4328379	4328717	.	+	0	ID=cds4002;Name=YP_002405150.1;Parent=gene4304;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405150.1,GeneID:7146404;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405150.1;transl_table=11
NC_011748.1	RefSeq	gene	4328742	4330292	.	-	.	ID=gene4305;Name=yifB;Dbxref=GeneID:7149089;gbkey=Gene;gene=yifB;locus_tag=EC55989_4239
NC_011748.1	RefSeq	CDS	4328742	4330292	.	-	0	ID=cds4003;Name=YP_002405151.1;Parent=gene4305;Note=among the AAA%2B ATPases%2C the YifB protease family belongs to the Helix 2 insert clade%3B unknown function;Dbxref=Genbank:YP_002405151.1,GeneID:7149089;gbkey=CDS;product=ATP-dependent protease;protein_id=YP_002405151.1;transl_table=11
NC_011748.1	RefSeq	gene	4330615	4330713	.	+	.	ID=gene4306;Name=ilvL;Dbxref=GeneID:7149088;gbkey=Gene;gene=ilvL;locus_tag=EC55989_5074
NC_011748.1	RefSeq	CDS	4330615	4330713	.	+	0	ID=cds4004;Name=YP_002405152.1;Parent=gene4306;Note=Evidence 1c : Function experimentally demonstrated in the studied genus%3B Product type l : leader peptide;Dbxref=Genbank:YP_002405152.1,GeneID:7149088;gbkey=CDS;product=ilvG operon leader peptide;protein_id=YP_002405152.1;transl_table=11
NC_011748.1	RefSeq	gene	4330853	4332499	.	+	.	ID=gene4307;Name=ilvG;Dbxref=GeneID:7146557;gbkey=Gene;gene=ilvG;locus_tag=EC55989_4240
NC_011748.1	RefSeq	CDS	4330853	4332499	.	+	0	ID=cds4005;Name=YP_002405153.1;Parent=gene4307;Note=catalyzes the formation of 2-acetolactate from pyruvate%3B also known as acetolactate synthase large subunit;Dbxref=Genbank:YP_002405153.1,GeneID:7146557;gbkey=CDS;product=acetolactate synthase 2 catalytic subunit;protein_id=YP_002405153.1;transl_table=11
NC_011748.1	RefSeq	gene	4332496	4332759	.	+	.	ID=gene4308;Name=ilvM;Dbxref=GeneID:7146554;gbkey=Gene;gene=ilvM;locus_tag=EC55989_4241
NC_011748.1	RefSeq	CDS	4332496	4332759	.	+	0	ID=cds4006;Name=YP_002405154.1;Parent=gene4308;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 92332418%2C 92380929%2C 1569580%2C 3550695%2C 3897211%3B Product type e : enzyme;Dbxref=Genbank:YP_002405154.1,GeneID:7146554;gbkey=CDS;product=acetolactate synthase 2 regulatory subunit;protein_id=YP_002405154.1;transl_table=11
NC_011748.1	RefSeq	gene	4332779	4333708	.	+	.	ID=gene4309;Name=ilvE;Dbxref=GeneID:7146558;gbkey=Gene;gene=ilvE;locus_tag=EC55989_4242
NC_011748.1	RefSeq	CDS	4332779	4333708	.	+	0	ID=cds4007;Name=YP_002405155.1;Parent=gene4309;Note=catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids;Dbxref=Genbank:YP_002405155.1,GeneID:7146558;gbkey=CDS;product=branched-chain amino acid aminotransferase;protein_id=YP_002405155.1;transl_table=11
NC_011748.1	RefSeq	gene	4333773	4335623	.	+	.	ID=gene4310;Name=ilvD;Dbxref=GeneID:7146553;gbkey=Gene;gene=ilvD;locus_tag=EC55989_4243
NC_011748.1	RefSeq	CDS	4333773	4335623	.	+	0	ID=cds4008;Name=YP_002405156.1;Parent=gene4310;Note=catalyzes the dehydration of 2%2C3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis;Dbxref=Genbank:YP_002405156.1,GeneID:7146553;gbkey=CDS;product=dihydroxy-acid dehydratase;protein_id=YP_002405156.1;transl_table=11
NC_011748.1	RefSeq	gene	4335626	4337170	.	+	.	ID=gene4311;Name=ilvA;Dbxref=GeneID:7146552;gbkey=Gene;gene=ilvA;locus_tag=EC55989_4244
NC_011748.1	RefSeq	CDS	4335626	4337170	.	+	0	ID=cds4009;Name=YP_002405157.1;Parent=gene4311;Note=threonine deaminase%3B threonine dehydratase%3B in Escherichia coli%2C IlvA is part of the isoleucine biosynthetic pathway;Dbxref=Genbank:YP_002405157.1,GeneID:7146552;gbkey=CDS;product=threonine dehydratase;protein_id=YP_002405157.1;transl_table=11
NC_011748.1	RefSeq	gene	4337222	4338115	.	-	.	ID=gene4312;Name=ilvY;Dbxref=GeneID:7146549;gbkey=Gene;gene=ilvY;locus_tag=EC55989_4245
NC_011748.1	RefSeq	CDS	4337222	4338115	.	-	0	ID=cds4010;Name=YP_002405158.1;Parent=gene4312;Note=participates in controlling several genes involved in isoleucine and valine biosynthesis%3B activates the transcription of the ilvC gene in the presence of acetolactate or acetohydroxybutyrate;Dbxref=Genbank:YP_002405158.1,GeneID:7146549;gbkey=CDS;product=DNA-binding transcriptional regulator IlvY;protein_id=YP_002405158.1;transl_table=11
NC_011748.1	RefSeq	gene	4338265	4339740	.	+	.	ID=gene4313;Name=ilvC;Dbxref=GeneID:7146562;gbkey=Gene;gene=ilvC;locus_tag=EC55989_4246
NC_011748.1	RefSeq	CDS	4338265	4339740	.	+	0	ID=cds4011;Name=YP_002405159.1;Parent=gene4313;Note=catalyzes the formation of %28R%29-2%2C3-dihydroxy-3-methylbutanoate from %28S%29-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis;Dbxref=Genbank:YP_002405159.1,GeneID:7146562;gbkey=CDS;product=ketol-acid reductoisomerase;protein_id=YP_002405159.1;transl_table=11
NC_011748.1	RefSeq	gene	4339827	4340108	.	-	.	ID=gene4314;Name=ppiC;Dbxref=GeneID:7146551;gbkey=Gene;gene=ppiC;locus_tag=EC55989_4247
NC_011748.1	RefSeq	CDS	4339827	4340108	.	-	0	ID=cds4012;Name=YP_002405160.1;Parent=gene4314;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 94215709%2C 7878732%2C 7925971%2C 8163020%3B Product type e : enzyme;Dbxref=Genbank:YP_002405160.1,GeneID:7146551;gbkey=CDS;product=peptidyl-prolyl cis-trans isomerase C;protein_id=YP_002405160.1;transl_table=11
NC_011748.1	RefSeq	gene	4340307	4340798	.	-	.	ID=gene4315;Name=EC55989_4248;Dbxref=GeneID:7147230;gbkey=Gene;locus_tag=EC55989_4248
NC_011748.1	RefSeq	CDS	4340307	4340798	.	-	0	ID=cds4013;Name=YP_002405161.1;Parent=gene4315;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405161.1,GeneID:7147230;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405161.1;transl_table=11
NC_011748.1	RefSeq	gene	4340973	4342994	.	+	.	ID=gene4316;Name=rep;Dbxref=GeneID:7145070;gbkey=Gene;gene=rep;locus_tag=EC55989_4249
NC_011748.1	RefSeq	CDS	4340973	4342994	.	+	0	ID=cds4014;Name=YP_002405162.1;Parent=gene4316;Note=single-stranded DNA-dependent ATPase%3B initiates unwinding at a nick in the DNA%3B involved in DNA replication;Dbxref=Genbank:YP_002405162.1,GeneID:7145070;gbkey=CDS;product=ATP-dependent DNA helicase Rep;protein_id=YP_002405162.1;transl_table=11
NC_011748.1	RefSeq	gene	4343041	4344525	.	-	.	ID=gene4317;Name=gpp;Dbxref=GeneID:7147373;gbkey=Gene;gene=gpp;locus_tag=EC55989_4250
NC_011748.1	RefSeq	CDS	4343041	4344525	.	-	0	ID=cds4015;Name=YP_002405163.1;Parent=gene4317;Note=catalyzes the conversion of guanosine 5%27-triphosphate%2C3%27-diphosphate %28pppGpp%29 to guanosine 5%27-diphosphate%2C3%27-diphosphate %28ppGpp%29%3B pppGpp and ppGpp control the stringent response during amino acid starvation;Dbxref=Genbank:YP_002405163.1,GeneID:7147373;gbkey=CDS;product=guanosine pentaphosphate phosphohydrolase;protein_id=YP_002405163.1;transl_table=11
NC_011748.1	RefSeq	gene	4344659	4345924	.	-	.	ID=gene4318;Name=rhlB;Dbxref=GeneID:7146362;gbkey=Gene;gene=rhlB;locus_tag=EC55989_4251
NC_011748.1	RefSeq	CDS	4344659	4345924	.	-	0	ID=cds4016;Name=YP_002405164.1;Parent=gene4318;Note=enables ATP-dependent unwinding of double stranded RNA as a component of the RNA degradosome%2C a multi-enzyme complex important in RNA processing and messenger RNA degradation;Dbxref=Genbank:YP_002405164.1,GeneID:7146362;gbkey=CDS;product=ATP-dependent RNA helicase RhlB;protein_id=YP_002405164.1;transl_table=11
NC_011748.1	RefSeq	gene	4346055	4346384	.	+	.	ID=gene4319;Name=trxA;Dbxref=GeneID:7147396;gbkey=Gene;gene=trxA;locus_tag=EC55989_4252
NC_011748.1	RefSeq	CDS	4346055	4346384	.	+	0	ID=cds4017;Name=YP_002405165.1;Parent=gene4319;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 90202710%2C 91154193%2C 92250497%2C 99175138%2C 10489448%2C 1094461%2C 10947986%2C 1561103%2C 2181145%2C 2193685%2C 3891733%2C 4616096%2C 4883076%2C 6098320%2C 6099324%2C 7812718%2C 8098620%2C 8253691%3B Product type c : carrier;Dbxref=Genbank:YP_002405165.1,GeneID:7147396;gbkey=CDS;product=thioredoxin;protein_id=YP_002405165.1;transl_table=11
NC_011748.1	RefSeq	gene	4346525	4346626	.	+	.	ID=gene4320;Name=rhoL;Dbxref=GeneID:7147862;gbkey=Gene;gene=rhoL;locus_tag=EC55989_5075
NC_011748.1	RefSeq	CDS	4346525	4346626	.	+	0	ID=cds4018;Name=YP_002405166.1;Parent=gene4320;Note=Evidence 1c : Function experimentally demonstrated in the studied genus%3B Product type l : leader peptide;Dbxref=Genbank:YP_002405166.1,GeneID:7147862;gbkey=CDS;product=rho operon leader peptide;protein_id=YP_002405166.1;transl_table=11
NC_011748.1	RefSeq	gene	4346711	4347970	.	+	.	ID=gene4321;Name=rho;Dbxref=GeneID:7147399;gbkey=Gene;gene=rho;locus_tag=EC55989_4254
NC_011748.1	RefSeq	CDS	4346711	4347970	.	+	0	ID=cds4019;Name=YP_002405167.1;Parent=gene4321;Note=An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes;Dbxref=Genbank:YP_002405167.1,GeneID:7147399;gbkey=CDS;product=transcription termination factor Rho;protein_id=YP_002405167.1;transl_table=11
NC_011748.1	RefSeq	STS	4347466	4347734	.	+	.	ID=id350;Dbxref=UniSTS:230086,GeneID:7147399;gbkey=STS
NC_011748.1	RefSeq	gene	4347980	4348198	.	+	.	ID=gene4322;Name=EC55989_4255;Dbxref=GeneID:7147398;gbkey=Gene;locus_tag=EC55989_4255
NC_011748.1	RefSeq	CDS	4347980	4348198	.	+	0	ID=cds4020;Name=YP_002405168.1;Parent=gene4322;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405168.1,GeneID:7147398;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405168.1;transl_table=11
NC_011748.1	RefSeq	gene	4348210	4349313	.	+	.	ID=gene4323;Name=rfe;Dbxref=GeneID:7145071;gbkey=Gene;gene=rfe;locus_tag=EC55989_4256
NC_011748.1	RefSeq	CDS	4348210	4349313	.	+	0	ID=cds4021;Name=YP_002405169.1;Parent=gene4323;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 92114763%2C 94245613%2C 94292435%2C 10629198%2C 11024259%2C 11700352%2C 11832520%2C 1722555%2C 1730666%3B Product type e : enzyme;Dbxref=Genbank:YP_002405169.1,GeneID:7145071;gbkey=CDS;product=UDP-GlcNAc:undecaprenylphosphate GlcNAc-1-phosphate transferase;protein_id=YP_002405169.1;transl_table=11
NC_011748.1	RefSeq	gene	4349325	4350371	.	+	.	ID=gene4324;Name=wzzE;Dbxref=GeneID:7147381;gbkey=Gene;gene=wzzE;locus_tag=EC55989_4257
NC_011748.1	RefSeq	CDS	4349325	4350371	.	+	0	ID=cds4022;Name=YP_002405170.1;Parent=gene4324;Note=Enterobacterial Common Antigen %28ECA%29 polysaccharide chain length modulation protein;Dbxref=Genbank:YP_002405170.1,GeneID:7147381;gbkey=CDS;product=lipopolysaccharide biosynthesis protein WzzE;protein_id=YP_002405170.1;transl_table=11
NC_011748.1	RefSeq	gene	4350427	4351557	.	+	.	ID=gene4325;Name=rffE;Dbxref=GeneID:7147980;gbkey=Gene;gene=rffE;locus_tag=EC55989_4258
NC_011748.1	RefSeq	CDS	4350427	4351557	.	+	0	ID=cds4023;Name=YP_002405171.1;Parent=gene4325;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 90212314%2C 90337949%2C 92112804%2C 94042873%2C 11106477%2C 7559340%2C 8170390%2C 8226648%3B Product type e : enzyme;Dbxref=Genbank:YP_002405171.1,GeneID:7147980;gbkey=CDS;product=UDP-N-acetyl glucosamine-2-epimerase;protein_id=YP_002405171.1;transl_table=11
NC_011748.1	RefSeq	gene	4351554	4352816	.	+	.	ID=gene4326;Name=wecC;Dbxref=GeneID:7147385;gbkey=Gene;gene=wecC;locus_tag=EC55989_4259
NC_011748.1	RefSeq	CDS	4351554	4352816	.	+	0	ID=cds4024;Name=YP_002405172.1;Parent=gene4326;Note=catalyzes the oxidation of UDP-N-acetyl-D-mannosamine to UDP-N-acetylmannosaminuronic acid;Dbxref=Genbank:YP_002405172.1,GeneID:7147385;gbkey=CDS;product=UDP-N-acetyl-D-mannosamine dehydrogenase;protein_id=YP_002405172.1;transl_table=11
NC_011748.1	RefSeq	gene	4352816	4353883	.	+	.	ID=gene4327;Name=rffG;Dbxref=GeneID:7147384;gbkey=Gene;gene=rffG;locus_tag=EC55989_4260
NC_011748.1	RefSeq	CDS	4352816	4353883	.	+	0	ID=cds4025;Name=YP_002405173.1;Parent=gene4327;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 88086930%2C 90212314%2C 90337949%2C 92112804%2C 92174908%2C 94018634%2C 94042873%2C 7559340%3B Product type e : enzyme;Dbxref=Genbank:YP_002405173.1,GeneID:7147384;gbkey=CDS;product=dTDP-glucose 4%2C6-dehydratase;protein_id=YP_002405173.1;transl_table=11
NC_011748.1	RefSeq	gene	4353902	4354783	.	+	.	ID=gene4328;Name=rffH;Dbxref=GeneID:7147386;gbkey=Gene;gene=rffH;locus_tag=EC55989_4261
NC_011748.1	RefSeq	CDS	4353902	4354783	.	+	0	ID=cds4026;Name=YP_002405174.1;Parent=gene4328;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 94292435%2C 96032389%3B Product type e : enzyme;Dbxref=Genbank:YP_002405174.1,GeneID:7147386;gbkey=CDS;product=glucose-1-phosphate thymidylyltransferase;protein_id=YP_002405174.1;transl_table=11
NC_011748.1	RefSeq	gene	4354761	4355435	.	+	.	ID=gene4329;Name=rffC;Dbxref=GeneID:7147387;gbkey=Gene;gene=rffC;locus_tag=EC55989_4262
NC_011748.1	RefSeq	CDS	4354761	4355435	.	+	0	ID=cds4027;Name=YP_002405175.1;Parent=gene4329;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 90212314%2C 90337949%2C 92112804%2C 8366065%3B Product type e : enzyme;Dbxref=Genbank:YP_002405175.1,GeneID:7147387;gbkey=CDS;product=TDP-fucosamine acetyltransferase;protein_id=YP_002405175.1;transl_table=11
NC_011748.1	RefSeq	gene	4355440	4356570	.	+	.	ID=gene4330;Name=rffA;Dbxref=GeneID:7147383;gbkey=Gene;gene=rffA;locus_tag=EC55989_4263
NC_011748.1	RefSeq	CDS	4355440	4356570	.	+	0	ID=cds4028;Name=YP_002405176.1;Parent=gene4330;Note=catalyzes the formation of dTDP-D-fucosamine from dTDP-4-oxo-6-deoxy-D-glucose in enterobacterial common antigen biosynthesis;Dbxref=Genbank:YP_002405176.1,GeneID:7147383;gbkey=CDS;product=TDP-4-oxo-6-deoxy-D-glucose transaminase;protein_id=YP_002405176.1;transl_table=11
NC_011748.1	RefSeq	gene	4356572	4357822	.	+	.	ID=gene4331;Name=wzxE;Dbxref=GeneID:7147382;gbkey=Gene;gene=wzxE;locus_tag=EC55989_4264
NC_011748.1	RefSeq	CDS	4356572	4357822	.	+	0	ID=cds4029;Name=YP_002405177.1;Parent=gene4331;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 12621029%2C 20044778%3B Product type t : transporter;Dbxref=Genbank:YP_002405177.1,GeneID:7147382;gbkey=CDS;product=O-antigen translocase;protein_id=YP_002405177.1;transl_table=11
NC_011748.1	RefSeq	gene	4357819	4358898	.	+	.	ID=gene4332;Name=rffT;Dbxref=GeneID:7147978;gbkey=Gene;gene=rffT;locus_tag=EC55989_4265
NC_011748.1	RefSeq	CDS	4357819	4358898	.	+	0	ID=cds4030;Name=YP_002405178.1;Parent=gene4332;Note=catalyzes the synthesis of a lipid-linked intermediate involved in ECA synthesis;Dbxref=Genbank:YP_002405178.1,GeneID:7147978;gbkey=CDS;product=4-alpha-L-fucosyltransferase;protein_id=YP_002405178.1;transl_table=11
NC_011748.1	RefSeq	gene	4358895	4360247	.	+	.	ID=gene4333;Name=wzyE;Dbxref=GeneID:7147389;gbkey=Gene;gene=wzyE;locus_tag=EC55989_4266
NC_011748.1	RefSeq	CDS	4358895	4360247	.	+	0	ID=cds4031;Name=YP_002405179.1;Parent=gene4333;Note=enterobacterial common antigen polymerase;Dbxref=Genbank:YP_002405179.1,GeneID:7147389;gbkey=CDS;product=common antigen polymerase;protein_id=YP_002405179.1;transl_table=11
NC_011748.1	RefSeq	gene	4360250	4360990	.	+	.	ID=gene4334;Name=rffM;Dbxref=GeneID:7147979;gbkey=Gene;gene=rffM;locus_tag=EC55989_4267
NC_011748.1	RefSeq	CDS	4360250	4360990	.	+	0	ID=cds4032;Name=YP_002405180.1;Parent=gene4334;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 88086874%2C 90337949%2C 92112804%3B Product type e : enzyme;Dbxref=Genbank:YP_002405180.1,GeneID:7147979;gbkey=CDS;product=UDP-N-acetyl-D-mannosaminuronic acid transferase;protein_id=YP_002405180.1;transl_table=11
NC_011748.1	RefSeq	gene	4361181	4362566	.	+	.	ID=gene4335;Name=yifK;Dbxref=GeneID:7147388;gbkey=Gene;gene=yifK;locus_tag=EC55989_4268
NC_011748.1	RefSeq	CDS	4361181	4362566	.	+	0	ID=cds4033;Name=YP_002405181.1;Parent=gene4335;Note=uncharacterized member of the amino acid-polyamine-organocation %28APC%29 superfamily of amino acid transporters%3B unknown function;Dbxref=Genbank:YP_002405181.1,GeneID:7147388;gbkey=CDS;product=transporter;protein_id=YP_002405181.1;transl_table=11
NC_011748.1	RefSeq	gene	4362669	4362745	.	+	.	ID=gene4336;Name=EC55989_tRNA40;Dbxref=GeneID:7149090;gbkey=Gene;locus_tag=EC55989_tRNA40
NC_011748.1	RefSeq	tRNA	4362669	4362745	.	+	.	ID=rna177;Dbxref=GeneID:7149090;gbkey=tRNA;product=tRNA-Arg
NC_011748.1	RefSeq	exon	4362669	4362745	.	+	.	ID=id351;Parent=rna177;Dbxref=GeneID:7149090;gbkey=tRNA;product=tRNA-Arg
NC_011748.1	RefSeq	gene	4362804	4362879	.	+	.	ID=gene4337;Name=EC55989_tRNA41;Dbxref=GeneID:7145351;gbkey=Gene;locus_tag=EC55989_tRNA41
NC_011748.1	RefSeq	tRNA	4362804	4362879	.	+	.	ID=rna178;Dbxref=GeneID:7145351;gbkey=tRNA;product=tRNA-His
NC_011748.1	RefSeq	exon	4362804	4362879	.	+	.	ID=id352;Parent=rna178;Dbxref=GeneID:7145351;gbkey=tRNA;product=tRNA-His
NC_011748.1	RefSeq	gene	4362900	4362986	.	+	.	ID=gene4338;Name=EC55989_tRNA42;Dbxref=GeneID:7145352;gbkey=Gene;locus_tag=EC55989_tRNA42
NC_011748.1	RefSeq	tRNA	4362900	4362986	.	+	.	ID=rna179;Dbxref=GeneID:7145352;gbkey=tRNA;product=tRNA-Leu
NC_011748.1	RefSeq	exon	4362900	4362986	.	+	.	ID=id353;Parent=rna179;Dbxref=GeneID:7145352;gbkey=tRNA;product=tRNA-Leu
NC_011748.1	RefSeq	gene	4363029	4363105	.	+	.	ID=gene4339;Name=EC55989_tRNA43;Dbxref=GeneID:7145353;gbkey=Gene;locus_tag=EC55989_tRNA43
NC_011748.1	RefSeq	tRNA	4363029	4363105	.	+	.	ID=rna180;Dbxref=GeneID:7145353;gbkey=tRNA;product=tRNA-Pro
NC_011748.1	RefSeq	exon	4363029	4363105	.	+	.	ID=id354;Parent=rna180;Dbxref=GeneID:7145353;gbkey=tRNA;product=tRNA-Pro
NC_011748.1	RefSeq	gene	4363252	4364487	.	+	.	ID=gene4340;Name=aslB;Dbxref=GeneID:7145354;gbkey=Gene;gene=aslB;locus_tag=EC55989_4270
NC_011748.1	RefSeq	CDS	4363252	4364487	.	+	0	ID=cds4034;Name=YP_002405182.1;Parent=gene4340;Note=Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism%3B PubMedId : 11222759%2C 2180918%2C 12419807%2C 14749327%3B Product type pr :  regulator;Dbxref=Genbank:YP_002405182.1,GeneID:7145354;gbkey=CDS;product=regulator of arylsulfatase activity;protein_id=YP_002405182.1;transl_table=11
NC_011748.1	RefSeq	gene	4364571	4364732	.	-	.	ID=gene4341;Name=aslA;Dbxref=GeneID:7145565;gbkey=Gene;gene=aslA;locus_tag=EC55989_4271;pseudo=true
NC_011748.1	RefSeq	region	4364571	4364732	.	-	.	ID=id355;Note=fragment of arylsulfatase-like enzyme %28partial%29%3BEvidence 7 : Gene remnant%3B Product type e : enzyme;Dbxref=GeneID:7145565;gbkey=misc_feature
NC_011748.1	RefSeq	gene	4365157	4365328	.	+	.	ID=gene4342;Name=ryiA;Dbxref=GeneID:7145564;gbkey=Gene;gene=ryiA;locus_tag=EC55989_misc_RNA_92
NC_011748.1	RefSeq	transcript	4365157	4365328	.	+	.	ID=rna181;Parent=gene4342;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 11445539%3B Product type n : RNA;Dbxref=GeneID:7145564;gbkey=misc_RNA;product=RyiA
NC_011748.1	RefSeq	exon	4365157	4365328	.	+	.	ID=id356;Parent=rna181;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 11445539%3B Product type n : RNA;Dbxref=GeneID:7145564;gbkey=misc_RNA;product=RyiA
NC_011748.1	RefSeq	gene	4365411	4366607	.	-	.	ID=gene4343;Name=hemY;Dbxref=GeneID:7147593;gbkey=Gene;gene=hemY;locus_tag=EC55989_4272
NC_011748.1	RefSeq	CDS	4365411	4366607	.	-	0	ID=cds4035;Name=YP_002405183.1;Parent=gene4343;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 89041586%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002405183.1,GeneID:7147593;gbkey=CDS;product=protoheme IX biogenesis protein;protein_id=YP_002405183.1;transl_table=11
NC_011748.1	RefSeq	gene	4366610	4367815	.	-	.	ID=gene4344;Name=hemX;Dbxref=GeneID:7146418;gbkey=Gene;gene=hemX;locus_tag=EC55989_4273
NC_011748.1	RefSeq	CDS	4366610	4367815	.	-	0	ID=cds4036;Name=YP_002405184.1;Parent=gene4344;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 89098348%2C 92358234%2C 3054815%2C 3062586%2C 9298646%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002405184.1,GeneID:7146418;gbkey=CDS;product=uroporphyrinogen III C-methyltransferase;protein_id=YP_002405184.1;transl_table=11
NC_011748.1	RefSeq	gene	4367837	4368577	.	-	.	ID=gene4345;Name=hemD;Dbxref=GeneID:7146417;gbkey=Gene;gene=hemD;locus_tag=EC55989_4274
NC_011748.1	RefSeq	CDS	4367837	4368577	.	-	0	ID=cds4037;Name=YP_002405185.1;Parent=gene4345;Note=catalyzes the formation of uroporphyrinogen-III from hydroxymethylbilane%3B functions in tetrapyrrole and heme biosynthesis;Dbxref=Genbank:YP_002405185.1,GeneID:7146417;gbkey=CDS;product=uroporphyrinogen-III synthase;protein_id=YP_002405185.1;transl_table=11
NC_011748.1	RefSeq	gene	4368574	4369515	.	-	.	ID=gene4346;Name=hemC;Dbxref=GeneID:7146410;gbkey=Gene;gene=hemC;locus_tag=EC55989_4275
NC_011748.1	RefSeq	CDS	4368574	4369515	.	-	0	ID=cds4038;Name=YP_002405186.1;Parent=gene4346;Note=transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis;Dbxref=Genbank:YP_002405186.1,GeneID:7146410;gbkey=CDS;product=porphobilinogen deaminase;protein_id=YP_002405186.1;transl_table=11
NC_011748.1	RefSeq	gene	4369902	4372448	.	+	.	ID=gene4347;Name=cyaA;Dbxref=GeneID:7146409;gbkey=Gene;gene=cyaA;locus_tag=EC55989_4276
NC_011748.1	RefSeq	CDS	4369902	4372448	.	+	0	ID=cds4039;Name=YP_002405187.1;Parent=gene4347;Note=catalyzes transfer of adenylyl group of ATP from pyrophosphate to the 3%27-hydroxyl group to form cyclic AMP;Dbxref=Genbank:YP_002405187.1,GeneID:7146409;gbkey=CDS;product=adenylate cyclase;protein_id=YP_002405187.1;transl_table=11
NC_011748.1	RefSeq	gene	4372488	4372808	.	-	.	ID=gene4348;Name=cyaY;Dbxref=GeneID:7145802;gbkey=Gene;gene=cyaY;locus_tag=EC55989_4277
NC_011748.1	RefSeq	CDS	4372488	4372808	.	-	0	ID=cds4040;Name=YP_002405188.1;Parent=gene4348;Note=defects in the mitochondrial frataxin protein cause Friedreich ataxis which is an autosomal recessive neurodegenerative disease%3B based on phylogenomic distribution this protein may have a role in iron-sulfur cluster protein assembly;Dbxref=Genbank:YP_002405188.1,GeneID:7145802;gbkey=CDS;product=frataxin-like protein;protein_id=YP_002405188.1;transl_table=11
NC_011748.1	RefSeq	gene	4372856	4374181	.	-	.	ID=gene4349;Name=EC55989_4278;Dbxref=GeneID:7145803;gbkey=Gene;locus_tag=EC55989_4278
NC_011748.1	RefSeq	CDS	4372856	4374181	.	-	0	ID=cds4041;Name=YP_002405189.1;Parent=gene4349;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405189.1,GeneID:7145803;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405189.1;transl_table=11
NC_011748.1	RefSeq	gene	4374178	4375686	.	-	.	ID=gene4350;Name=EC55989_4279;Dbxref=GeneID:7145072;gbkey=Gene;locus_tag=EC55989_4279
NC_011748.1	RefSeq	CDS	4374178	4375686	.	-	0	ID=cds4042;Name=YP_002405190.1;Parent=gene4350;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405190.1,GeneID:7145072;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405190.1;transl_table=11
NC_011748.1	RefSeq	gene	4376024	4376578	.	-	.	ID=gene4351;Name=EC55989_4280;Dbxref=GeneID:7145073;gbkey=Gene;locus_tag=EC55989_4280
NC_011748.1	RefSeq	CDS	4376024	4376578	.	-	0	ID=cds4043;Name=YP_002405191.1;Parent=gene4351;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405191.1,GeneID:7145073;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405191.1;transl_table=11
NC_011748.1	RefSeq	gene	4376585	4376719	.	-	.	ID=gene4352;Name=EC55989_4281;Dbxref=GeneID:7145074;gbkey=Gene;locus_tag=EC55989_4281
NC_011748.1	RefSeq	CDS	4376585	4376719	.	-	0	ID=cds4044;Name=YP_002405192.1;Parent=gene4352;Note=Evidence 6 : Doubtful CDS;Dbxref=Genbank:YP_002405192.1,GeneID:7145074;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405192.1;transl_table=11
NC_011748.1	RefSeq	gene	4376928	4377131	.	+	.	ID=gene4353;Name=yifL;Dbxref=GeneID:7145075;gbkey=Gene;gene=yifL;locus_tag=EC55989_4282
NC_011748.1	RefSeq	CDS	4376928	4377131	.	+	0	ID=cds4045;Name=YP_002405193.1;Parent=gene4353;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type lp : lipoprotein;Dbxref=Genbank:YP_002405193.1,GeneID:7145075;gbkey=CDS;product=lipoprotein;protein_id=YP_002405193.1;transl_table=11
NC_011748.1	RefSeq	gene	4377168	4377992	.	+	.	ID=gene4354;Name=dapF;Dbxref=GeneID:7149091;gbkey=Gene;gene=dapF;locus_tag=EC55989_4283
NC_011748.1	RefSeq	CDS	4377168	4377992	.	+	0	ID=cds4046;Name=YP_002405194.1;Parent=gene4354;Note=involved in lysine biosynthesis%3B DAP epimerase%3B produces DL-diaminopimelate from LL-diaminopimelate;Dbxref=Genbank:YP_002405194.1,GeneID:7149091;gbkey=CDS;product=diaminopimelate epimerase;protein_id=YP_002405194.1;transl_table=11
NC_011748.1	RefSeq	gene	4377989	4378696	.	+	.	ID=gene4355;Name=yigA;Dbxref=GeneID:7145853;gbkey=Gene;gene=yigA;locus_tag=EC55989_4284
NC_011748.1	RefSeq	CDS	4377989	4378696	.	+	0	ID=cds4047;Name=YP_002405195.1;Parent=gene4355;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405195.1,GeneID:7145853;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405195.1;transl_table=11
NC_011748.1	RefSeq	gene	4378693	4379589	.	+	.	ID=gene4356;Name=xerC;Dbxref=GeneID:7149092;gbkey=Gene;gene=xerC;locus_tag=EC55989_4285
NC_011748.1	RefSeq	CDS	4378693	4379589	.	+	0	ID=cds4048;Name=YP_002405196.1;Parent=gene4356;Note=site-specific tyrosine recombinase which cuts and rejoins DNA molecules%3B binds cooperatively to specific DNA consensus sites%3B forms a heterotetrameric complex with XerC%3B XerCD exhibit similar sequences%3B essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation%3B cell division protein FtsK may regulate the XerCD complex%3B enzyme from Streptococcus group has unusual active site motifs;Dbxref=Genbank:YP_002405196.1,GeneID:7149092;gbkey=CDS;product=site-specific tyrosine recombinase XerC;protein_id=YP_002405196.1;transl_table=11
NC_011748.1	RefSeq	gene	4379589	4380305	.	+	.	ID=gene4357;Name=yigB;Dbxref=GeneID:7147989;gbkey=Gene;gene=yigB;locus_tag=EC55989_4286
NC_011748.1	RefSeq	CDS	4379589	4380305	.	+	0	ID=cds4049;Name=YP_002405197.1;Parent=gene4357;Note=YigB%3B member of the haloacid dehalogenase %28HAD%29-like hydrolases superfamily of protein%3B unknown function;Dbxref=Genbank:YP_002405197.1,GeneID:7147989;gbkey=CDS;product=flavin mononucleotide phosphatase;protein_id=YP_002405197.1;transl_table=11
NC_011748.1	RefSeq	gene	4380389	4382551	.	+	.	ID=gene4358;Name=uvrD;Dbxref=GeneID:7149093;gbkey=Gene;gene=uvrD;locus_tag=EC55989_4287
NC_011748.1	RefSeq	CDS	4380389	4382551	.	+	0	ID=cds4050;Name=YP_002405198.1;Parent=gene4358;Note=unwinds DNA duplexes with 3%27 to 5%27 polarity with respect to the bound strand and initiates unwinding most effectively when a single-stranded region is present%3B involved in the post-incision events of nucleotide excision repair and methyl-directed mismatch repair.;Dbxref=Genbank:YP_002405198.1,GeneID:7149093;gbkey=CDS;product=DNA-dependent helicase II;protein_id=YP_002405198.1;transl_table=11
NC_011748.1	RefSeq	gene	4382698	4383462	.	-	.	ID=gene4359;Name=yigE;Dbxref=GeneID:7147936;gbkey=Gene;gene=yigE;locus_tag=EC55989_4288
NC_011748.1	RefSeq	CDS	4382698	4383462	.	-	0	ID=cds4051;Name=YP_002405199.1;Parent=gene4359;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405199.1,GeneID:7147936;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405199.1;transl_table=11
NC_011748.1	RefSeq	gene	4383832	4384782	.	+	.	ID=gene4360;Name=corA;Dbxref=GeneID:7149094;gbkey=Gene;gene=corA;locus_tag=EC55989_4289
NC_011748.1	RefSeq	CDS	4383832	4384782	.	+	0	ID=cds4052;Name=YP_002405200.1;Parent=gene4360;Note=responsible for the influx of magnesium ions;Dbxref=Genbank:YP_002405200.1,GeneID:7149094;gbkey=CDS;product=magnesium%2Fnickel%2Fcobalt transporter CorA;protein_id=YP_002405200.1;transl_table=11
NC_011748.1	RefSeq	gene	4384824	4385315	.	-	.	ID=gene4361;Name=EC55989_4290;Dbxref=GeneID:7145743;gbkey=Gene;locus_tag=EC55989_4290
NC_011748.1	RefSeq	CDS	4384824	4385315	.	-	0	ID=cds4053;Name=YP_002405201.1;Parent=gene4361;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405201.1,GeneID:7145743;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405201.1;transl_table=11
NC_011748.1	RefSeq	gene	4385312	4386166	.	-	.	ID=gene4362;Name=EC55989_4291;Dbxref=GeneID:7145076;gbkey=Gene;locus_tag=EC55989_4291
NC_011748.1	RefSeq	CDS	4385312	4386166	.	-	0	ID=cds4054;Name=YP_002405202.1;Parent=gene4362;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405202.1,GeneID:7145076;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405202.1;transl_table=11
NC_011748.1	RefSeq	gene	4386290	4386493	.	+	.	ID=gene4363;Name=EC55989_4292;Dbxref=GeneID:7145077;gbkey=Gene;locus_tag=EC55989_4292
NC_011748.1	RefSeq	CDS	4386290	4386493	.	+	0	ID=cds4055;Name=YP_002405203.1;Parent=gene4363;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405203.1,GeneID:7145077;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405203.1;transl_table=11
NC_011748.1	RefSeq	gene	4386518	4386796	.	-	.	ID=gene4364;Name=EC55989_4293;Dbxref=GeneID:7145078;gbkey=Gene;locus_tag=EC55989_4293
NC_011748.1	RefSeq	CDS	4386518	4386796	.	-	0	ID=cds4056;Name=YP_002405204.1;Parent=gene4364;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405204.1,GeneID:7145078;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405204.1;transl_table=11
NC_011748.1	RefSeq	gene	4386573	4386689	.	+	.	ID=gene4365;Name=EC55989_4294;Dbxref=GeneID:7145079;gbkey=Gene;locus_tag=EC55989_4294
NC_011748.1	RefSeq	CDS	4386573	4386689	.	+	0	ID=cds4057;Name=YP_002405205.1;Parent=gene4365;Dbxref=Genbank:YP_002405205.1,GeneID:7145079;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405205.1;transl_table=11
NC_011748.1	RefSeq	gene	4387076	4387420	.	+	.	ID=gene4366;Name=EC55989_4295;Dbxref=GeneID:7145080;gbkey=Gene;locus_tag=EC55989_4295
NC_011748.1	RefSeq	CDS	4387076	4387420	.	+	0	ID=cds4058;Name=YP_002405206.1;Parent=gene4366;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405206.1,GeneID:7145080;gbkey=CDS;product=membrane protein;protein_id=YP_002405206.1;transl_table=11
NC_011748.1	RefSeq	gene	4387467	4388354	.	-	.	ID=gene4367;Name=rarD;Dbxref=GeneID:7145081;gbkey=Gene;gene=rarD;locus_tag=EC55989_4296
NC_011748.1	RefSeq	CDS	4387467	4388354	.	-	0	ID=cds4059;Name=YP_002405207.1;Parent=gene4367;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002405207.1,GeneID:7145081;gbkey=CDS;product=chloramphenicol resistance permease;protein_id=YP_002405207.1;transl_table=11
NC_011748.1	RefSeq	gene	4388406	4388873	.	-	.	ID=gene4368;Name=yigI;Dbxref=GeneID:7147336;gbkey=Gene;gene=yigI;locus_tag=EC55989_4297
NC_011748.1	RefSeq	CDS	4388406	4388873	.	-	0	ID=cds4060;Name=YP_002405208.1;Parent=gene4368;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405208.1,GeneID:7147336;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405208.1;transl_table=11
NC_011748.1	RefSeq	gene	4389038	4389907	.	+	.	ID=gene4369;Name=pldA;Dbxref=GeneID:7149095;gbkey=Gene;gene=pldA;locus_tag=EC55989_4298
NC_011748.1	RefSeq	CDS	4389038	4389907	.	+	0	ID=cds4061;Name=YP_002405209.1;Parent=gene4369;Note=catalyzes the hydrolysis of phosphatidylcholine;Dbxref=Genbank:YP_002405209.1,GeneID:7149095;gbkey=CDS;product=phospholipase A;protein_id=YP_002405209.1;transl_table=11
NC_011748.1	RefSeq	gene	4390040	4391869	.	+	.	ID=gene4370;Name=recQ;Dbxref=GeneID:7147193;gbkey=Gene;gene=recQ;locus_tag=EC55989_4299
NC_011748.1	RefSeq	CDS	4390040	4391869	.	+	0	ID=cds4062;Name=YP_002405210.1;Parent=gene4370;Note=functions in blocking illegitimate recombination%2C enhancing topoisomerase activity%2C initiating SOS signaling and clearing blocked replication forks%3B component of the RecF recombinational pathway;Dbxref=Genbank:YP_002405210.1,GeneID:7147193;gbkey=CDS;product=ATP-dependent DNA helicase RecQ;protein_id=YP_002405210.1;transl_table=11
NC_011748.1	RefSeq	gene	4391933	4392553	.	+	.	ID=gene4371;Name=rhtC;Dbxref=GeneID:7147366;gbkey=Gene;gene=rhtC;locus_tag=EC55989_4300
NC_011748.1	RefSeq	CDS	4391933	4392553	.	+	0	ID=cds4063;Name=YP_002405211.1;Parent=gene4371;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 99313167%2C 10386596%2C 3027506%3B Product type t : transporter;Dbxref=Genbank:YP_002405211.1,GeneID:7147366;gbkey=CDS;product=threonine efflux system;protein_id=YP_002405211.1;transl_table=11
NC_011748.1	RefSeq	gene	4392615	4393235	.	-	.	ID=gene4372;Name=rhtB;Dbxref=GeneID:7147408;gbkey=Gene;gene=rhtB;locus_tag=EC55989_4301
NC_011748.1	RefSeq	CDS	4392615	4393235	.	-	0	ID=cds4064;Name=YP_002405212.1;Parent=gene4372;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 99313167%2C 10386596%3B Product type t : transporter;Dbxref=Genbank:YP_002405212.1,GeneID:7147408;gbkey=CDS;product=homoserine%2Fhomoserine lactone efflux protein;protein_id=YP_002405212.1;transl_table=11
NC_011748.1	RefSeq	gene	4393346	4394368	.	+	.	ID=gene4373;Name=pldB;Dbxref=GeneID:7147407;gbkey=Gene;gene=pldB;locus_tag=EC55989_4302
NC_011748.1	RefSeq	CDS	4393346	4394368	.	+	0	ID=cds4065;Name=YP_002405213.1;Parent=gene4373;Note=lecithinase B%3B catalyzes the conversion of 1-lysophosphatidylcholine to glycerophosphocholine%3B can also hydrolyze 2-acyl glycerophosphoethanolamine and other substrates;Dbxref=Genbank:YP_002405213.1,GeneID:7147407;gbkey=CDS;product=lysophospholipase L2;protein_id=YP_002405213.1;transl_table=11
NC_011748.1	RefSeq	gene	4394376	4395176	.	+	.	ID=gene4374;Name=yigL;Dbxref=GeneID:7147194;gbkey=Gene;gene=yigL;locus_tag=EC55989_4303
NC_011748.1	RefSeq	CDS	4394376	4395176	.	+	0	ID=cds4066;Name=YP_002405214.1;Parent=gene4374;Note=purine and pyrimidine nucleotides are secondary substrates%3B yigL expression is regulated by heat shock%2C osmotic shock and starvation of glucose%2C phosphate or ammonium;Dbxref=Genbank:YP_002405214.1,GeneID:7147194;gbkey=CDS;product=sugar phosphatase;protein_id=YP_002405214.1;transl_table=11
NC_011748.1	RefSeq	gene	4395252	4396151	.	+	.	ID=gene4375;Name=yigM;Dbxref=GeneID:7149096;gbkey=Gene;gene=yigM;locus_tag=EC55989_4304
NC_011748.1	RefSeq	CDS	4395252	4396151	.	+	0	ID=cds4067;Name=YP_002405215.1;Parent=gene4375;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002405215.1,GeneID:7149096;gbkey=CDS;product=inner membrane protein;protein_id=YP_002405215.1;transl_table=11
NC_011748.1	RefSeq	gene	4396039	4396992	.	-	.	ID=gene4376;Name=metR;Dbxref=GeneID:7149097;gbkey=Gene;gene=metR;locus_tag=EC55989_4305
NC_011748.1	RefSeq	CDS	4396039	4396992	.	-	0	ID=cds4068;Name=YP_002405216.1;Parent=gene4376;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 90384950%2C 96303520%2C 2205852%2C 2643109%3B Product type r : regulator;Dbxref=Genbank:YP_002405216.1,GeneID:7149097;gbkey=CDS;product=DNA-binding transcriptional activator%2C homocysteine-binding;protein_id=YP_002405216.1;transl_table=11
NC_011748.1	RefSeq	gene	4397110	4399371	.	+	.	ID=gene4377;Name=metE;Dbxref=GeneID:7146837;gbkey=Gene;gene=metE;locus_tag=EC55989_4306
NC_011748.1	RefSeq	CDS	4397110	4399371	.	+	0	ID=cds4069;Name=YP_002405217.1;Parent=gene4377;Note=catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine to form methionine;Dbxref=Genbank:YP_002405217.1,GeneID:7146837;gbkey=CDS;product=5-methyltetrahydropteroyltriglutamate%2Fhomocysteine S-methyltransferase;protein_id=YP_002405217.1;transl_table=11
NC_011748.1	RefSeq	gene	4399410	4400225	.	-	.	ID=gene4378;Name=ysgA;Dbxref=GeneID:7146827;gbkey=Gene;gene=ysgA;locus_tag=EC55989_4307
NC_011748.1	RefSeq	CDS	4399410	4400225	.	-	0	ID=cds4070;Name=YP_002405218.1;Parent=gene4378;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 12676709%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002405218.1,GeneID:7146827;gbkey=CDS;product=hydrolase;protein_id=YP_002405218.1;transl_table=11
NC_011748.1	RefSeq	gene	4400487	4401248	.	+	.	ID=gene4379;Name=udp;Dbxref=GeneID:7149468;gbkey=Gene;gene=udp;locus_tag=EC55989_4308
NC_011748.1	RefSeq	CDS	4400487	4401248	.	+	0	ID=cds4071;Name=YP_002405219.1;Parent=gene4379;Note=catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate%3B involved in the pyrimidine salvage pathway;Dbxref=Genbank:YP_002405219.1,GeneID:7149468;gbkey=CDS;product=uridine phosphorylase;protein_id=YP_002405219.1;transl_table=11
NC_011748.1	RefSeq	gene	4401389	4402816	.	+	.	ID=gene4380;Name=rmuC;Dbxref=GeneID:7147898;gbkey=Gene;gene=rmuC;locus_tag=EC55989_4309
NC_011748.1	RefSeq	CDS	4401389	4402816	.	+	0	ID=cds4072;Name=YP_002405220.1;Parent=gene4380;Note=YigN%3B nuclease that may cleave DNA structures arising during the recombination of short-inverted repeats and thereby prevents the inversion of the internal sequence%3B transcription is induced by DNA-damaging agents such as nalidixic acid or mitomycin C in a LexA-dependent manner;Dbxref=Genbank:YP_002405220.1,GeneID:7147898;gbkey=CDS;product=DNA recombination protein RmuC;protein_id=YP_002405220.1;transl_table=11
NC_011748.1	RefSeq	gene	4402911	4403666	.	+	.	ID=gene4381;Name=ubiE;Dbxref=GeneID:7147431;gbkey=Gene;gene=ubiE;locus_tag=EC55989_4310
NC_011748.1	RefSeq	CDS	4402911	4403666	.	+	0	ID=cds4073;Name=YP_002405221.1;Parent=gene4381;Note=Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone;Dbxref=Genbank:YP_002405221.1,GeneID:7147431;gbkey=CDS;product=ubiquinone%2Fmenaquinone biosynthesis methyltransferase;protein_id=YP_002405221.1;transl_table=11
NC_011748.1	RefSeq	gene	4403680	4404285	.	+	.	ID=gene4382;Name=yigP;Dbxref=GeneID:7147891;gbkey=Gene;gene=yigP;locus_tag=EC55989_4311
NC_011748.1	RefSeq	CDS	4403680	4404285	.	+	0	ID=cds4074;Name=YP_002405222.1;Parent=gene4382;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405222.1,GeneID:7147891;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405222.1;transl_table=11
NC_011748.1	RefSeq	gene	4404282	4405922	.	+	.	ID=gene4383;Name=ubiB;Dbxref=GeneID:7149098;gbkey=Gene;gene=ubiB;locus_tag=EC55989_4312
NC_011748.1	RefSeq	CDS	4404282	4405922	.	+	0	ID=cds4075;Name=YP_002405223.1;Parent=gene4383;Note=an Escherichia coli mutant results in accumulation of octaprenylphenol and no ubiquinone%3B functions in the formation of 2-octaprenyl-6-hydroxy-phenol from 2-octaprenylphenol in ubiquinone %28coenzyme Q%29 biosynthesis%3B similar to eukaryotic proteins that exhibit kinase functions;Dbxref=Genbank:YP_002405223.1,GeneID:7149098;gbkey=CDS;product=ubiquinone biosynthesis protein UbiB;protein_id=YP_002405223.1;transl_table=11
NC_011748.1	RefSeq	gene	4406001	4406270	.	+	.	ID=gene4384;Name=tatA;Dbxref=GeneID:7147888;gbkey=Gene;gene=tatA;locus_tag=EC55989_4313
NC_011748.1	RefSeq	CDS	4406001	4406270	.	+	0	ID=cds4076;Name=YP_002405224.1;Parent=gene4384;Note=TatA%3B similar to TatE that is found in some proteobacteria%3B part of system that translocates proteins with a conserved twin arginine motif across the inner membrane%3B capable of translocating folded substrates typically those with bound cofactors%3B similar to a protein import system in thylakoid membranes;Dbxref=Genbank:YP_002405224.1,GeneID:7147888;gbkey=CDS;product=twin arginine translocase protein A;protein_id=YP_002405224.1;transl_table=11
NC_011748.1	RefSeq	gene	4406274	4406789	.	+	.	ID=gene4385;Name=tatB;Dbxref=GeneID:7147753;gbkey=Gene;gene=tatB;locus_tag=EC55989_4314
NC_011748.1	RefSeq	CDS	4406274	4406789	.	+	0	ID=cds4077;Name=YP_002405225.1;Parent=gene4385;Note=mediates the export of protein precursors bearing twin-arginine signal peptides;Dbxref=Genbank:YP_002405225.1,GeneID:7147753;gbkey=CDS;product=sec-independent translocase;protein_id=YP_002405225.1;transl_table=11
NC_011748.1	RefSeq	gene	4406792	4407568	.	+	.	ID=gene4386;Name=tatC;Dbxref=GeneID:7147754;gbkey=Gene;gene=tatC;locus_tag=EC55989_4315
NC_011748.1	RefSeq	CDS	4406792	4407568	.	+	0	ID=cds4078;Name=YP_002405226.1;Parent=gene4386;Note=with TatABE forms the twin-arginine translocation complex which is involved in the transport of proteins across the cytoplasmic membrane;Dbxref=Genbank:YP_002405226.1,GeneID:7147754;gbkey=CDS;product=twin-arginine protein translocation system subunit TatC;protein_id=YP_002405226.1;transl_table=11
NC_011748.1	RefSeq	gene	4407610	4408392	.	+	.	ID=gene4387;Name=tatD;Dbxref=GeneID:7147755;gbkey=Gene;gene=tatD;locus_tag=EC55989_4316
NC_011748.1	RefSeq	CDS	4407610	4408392	.	+	0	ID=cds4079;Name=YP_002405227.1;Parent=gene4387;Note=magnesium dependent%3B not involved in the Sec-independent protein export system;Dbxref=Genbank:YP_002405227.1,GeneID:7147755;gbkey=CDS;product=DNase TatD;protein_id=YP_002405227.1;transl_table=11
NC_011748.1	RefSeq	gene	4408389	4408877	.	-	.	ID=gene4388;Name=rfaH;Dbxref=GeneID:7147756;gbkey=Gene;gene=rfaH;locus_tag=EC55989_4317
NC_011748.1	RefSeq	CDS	4408389	4408877	.	-	0	ID=cds4080;Name=YP_002405228.1;Parent=gene4388;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 92011415%2C 92250420%2C 92261317%2C 1584020%2C 12007406%3B Product type r : regulator;Dbxref=Genbank:YP_002405228.1,GeneID:7147756;gbkey=CDS;product=transcriptional activator RfaH;protein_id=YP_002405228.1;transl_table=11
NC_011748.1	RefSeq	gene	4409044	4410537	.	+	.	ID=gene4389;Name=ubiD;Dbxref=GeneID:7147375;gbkey=Gene;gene=ubiD;locus_tag=EC55989_4318
NC_011748.1	RefSeq	CDS	4409044	4410537	.	+	0	ID=cds4081;Name=YP_002405229.1;Parent=gene4389;Note=catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol;Dbxref=Genbank:YP_002405229.1,GeneID:7147375;gbkey=CDS;product=3-octaprenyl-4-hydroxybenzoate carboxy-lyase;protein_id=YP_002405229.1;transl_table=11
NC_011748.1	RefSeq	gene	4410583	4411284	.	+	.	ID=gene4390;Name=fre;Dbxref=GeneID:7147890;gbkey=Gene;gene=fre;locus_tag=EC55989_4319
NC_011748.1	RefSeq	CDS	4410583	4411284	.	+	0	ID=cds4082;Name=YP_002405230.1;Parent=gene4390;Note=NAD%28P%29H-flavin reductase%3B catalyzes the reversible oxidation%2Freduction of NAD%28P%29 and flavine mononucleotide%3B in Salmonella and E. coli this protein also reduces aquacob%28III%29alamin to cob%28II%29alamin;Dbxref=Genbank:YP_002405230.1,GeneID:7147890;gbkey=CDS;product=FMN reductase;protein_id=YP_002405230.1;transl_table=11
NC_011748.1	RefSeq	gene	4411476	4412639	.	-	.	ID=gene4391;Name=fadA;Dbxref=GeneID:7146183;gbkey=Gene;gene=fadA;locus_tag=EC55989_4320
NC_011748.1	RefSeq	CDS	4411476	4412639	.	-	0	ID=cds4083;Name=YP_002405231.1;Parent=gene4391;Note=FadA%3B fatty acid oxidation complex component beta%3B functions in a heterotetramer with FadB%3B similar to FadI2J2 complex%3B functions in beta-oxidation of fatty acids;Dbxref=Genbank:YP_002405231.1,GeneID:7146183;gbkey=CDS;product=3-ketoacyl-CoA thiolase;protein_id=YP_002405231.1;transl_table=11
NC_011748.1	RefSeq	gene	4412649	4414838	.	-	.	ID=gene4392;Name=fadB;Dbxref=GeneID:7146055;gbkey=Gene;gene=fadB;locus_tag=EC55989_4321
NC_011748.1	RefSeq	CDS	4412649	4414838	.	-	0	ID=cds4084;Name=YP_002405232.1;Parent=gene4392;Note=includes enoyl-CoA hydratase%2C delta%283%29-cis-delta%282%29-trans-enoyl-CoA isomerase%2C 3-hydroxyacyl-CoA dehydrogenase%2C and 3-hydroxybutyryl-CoA epimerase%3B catalyzes the formation of an hydroxyacyl-CoA by addition of water on enoyl-CoA%3B also exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities%3B forms a heterotetramer with FadA%3B similar to FadI2J2 complex%3B functions in beta-oxidation of fatty acids;Dbxref=Genbank:YP_002405232.1,GeneID:7146055;gbkey=CDS;product=multifunctional fatty acid oxidation complex subunit alpha;protein_id=YP_002405232.1;transl_table=11
NC_011748.1	RefSeq	gene	4415028	4416359	.	+	.	ID=gene4393;Name=pepQ;Dbxref=GeneID:7146056;gbkey=Gene;gene=pepQ;locus_tag=EC55989_4322
NC_011748.1	RefSeq	CDS	4415028	4416359	.	+	0	ID=cds4085;Name=YP_002405233.1;Parent=gene4393;Note=catalyzes the hydrolysis of dipeptides with a proline at the C-terminal%3B also catalyzes the low efficiency hydrolysis of organophosphate di- and tri-esters;Dbxref=Genbank:YP_002405233.1,GeneID:7146056;gbkey=CDS;product=proline dipeptidase;protein_id=YP_002405233.1;transl_table=11
NC_011748.1	RefSeq	gene	4416359	4416973	.	+	.	ID=gene4394;Name=yigZ;Dbxref=GeneID:7147136;gbkey=Gene;gene=yigZ;locus_tag=EC55989_4323
NC_011748.1	RefSeq	CDS	4416359	4416973	.	+	0	ID=cds4086;Name=YP_002405234.1;Parent=gene4394;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 15103642%3B Product type pf :  factor;Dbxref=Genbank:YP_002405234.1,GeneID:7147136;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405234.1;transl_table=11
NC_011748.1	RefSeq	gene	4417012	4418463	.	+	.	ID=gene4395;Name=trkH;Dbxref=GeneID:7149099;gbkey=Gene;gene=trkH;locus_tag=EC55989_4324
NC_011748.1	RefSeq	CDS	4417012	4418463	.	+	0	ID=cds4087;Name=YP_002405235.1;Parent=gene4395;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 91100357%2C 2243799%2C 7896723%3B Product type t : transporter;Dbxref=Genbank:YP_002405235.1,GeneID:7149099;gbkey=CDS;product=potassium transporter;protein_id=YP_002405235.1;transl_table=11
NC_011748.1	RefSeq	gene	4418475	4419020	.	+	.	ID=gene4396;Name=hemG;Dbxref=GeneID:7147843;gbkey=Gene;gene=hemG;locus_tag=EC55989_4325
NC_011748.1	RefSeq	CDS	4418475	4419020	.	+	0	ID=cds4088;Name=YP_002405236.1;Parent=gene4396;Note=catalyzes the oxidation of protoporphyrinogen IX to form protoporphyrin IX;Dbxref=Genbank:YP_002405236.1,GeneID:7147843;gbkey=CDS;product=protoporphyrinogen oxidase;protein_id=YP_002405236.1;transl_table=11
NC_011748.1	RefSeq	gene	4419398	4420939	.	+	.	ID=gene4397;Name=EC55989_16S_5;Dbxref=GeneID:7146413;gbkey=Gene;locus_tag=EC55989_16S_5
NC_011748.1	RefSeq	rRNA	4419398	4420939	.	+	.	ID=rna182;Parent=gene4397;Dbxref=GeneID:7146413;gbkey=rRNA;product=ribosomal RNA 16S
NC_011748.1	RefSeq	exon	4419398	4420939	.	+	.	ID=id357;Parent=rna182;Dbxref=GeneID:7146413;gbkey=rRNA;product=ribosomal RNA 16S
NC_011748.1	RefSeq	gene	4421008	4421084	.	+	.	ID=gene4398;Name=EC55989_tRNA44;Dbxref=GeneID:7144636;gbkey=Gene;locus_tag=EC55989_tRNA44
NC_011748.1	RefSeq	tRNA	4421008	4421084	.	+	.	ID=rna183;Dbxref=GeneID:7144636;gbkey=tRNA;product=tRNA-Ile
NC_011748.1	RefSeq	exon	4421008	4421084	.	+	.	ID=id358;Parent=rna183;Dbxref=GeneID:7144636;gbkey=tRNA;product=tRNA-Ile
NC_011748.1	RefSeq	gene	4421127	4421202	.	+	.	ID=gene4399;Name=EC55989_tRNA45;Dbxref=GeneID:7145355;gbkey=Gene;locus_tag=EC55989_tRNA45
NC_011748.1	RefSeq	tRNA	4421127	4421202	.	+	.	ID=rna184;Dbxref=GeneID:7145355;gbkey=tRNA;product=tRNA-Ala
NC_011748.1	RefSeq	exon	4421127	4421202	.	+	.	ID=id359;Parent=rna184;Dbxref=GeneID:7145355;gbkey=tRNA;product=tRNA-Ala
NC_011748.1	RefSeq	gene	4421386	4424288	.	+	.	ID=gene4400;Name=EC55989_23S_5;Dbxref=GeneID:7145356;gbkey=Gene;locus_tag=EC55989_23S_5
NC_011748.1	RefSeq	rRNA	4421386	4424288	.	+	.	ID=rna185;Parent=gene4400;Dbxref=GeneID:7145356;gbkey=rRNA;product=ribosomal RNA 23S
NC_011748.1	RefSeq	exon	4421386	4424288	.	+	.	ID=id360;Parent=rna185;Dbxref=GeneID:7145356;gbkey=rRNA;product=ribosomal RNA 23S
NC_011748.1	RefSeq	gene	4424382	4424501	.	+	.	ID=gene4401;Name=EC55989_5S_6;Dbxref=GeneID:7144763;gbkey=Gene;locus_tag=EC55989_5S_6
NC_011748.1	RefSeq	rRNA	4424382	4424501	.	+	.	ID=rna186;Parent=gene4401;Dbxref=GeneID:7144763;gbkey=rRNA;product=ribosomal RNA 5S
NC_011748.1	RefSeq	exon	4424382	4424501	.	+	.	ID=id361;Parent=rna186;Dbxref=GeneID:7144763;gbkey=rRNA;product=ribosomal RNA 5S
NC_011748.1	RefSeq	gene	4424604	4425116	.	-	.	ID=gene4402;Name=mobB;Dbxref=GeneID:7145292;gbkey=Gene;gene=mobB;locus_tag=EC55989_4332
NC_011748.1	RefSeq	CDS	4424604	4425116	.	-	0	ID=cds4089;Name=YP_002405237.1;Parent=gene4402;Note=in Escherichia coli the MobB protein is not essential but has been found to interact with multiple proteins involved in the molybdopterin guanine dinucleotide cofactor biosynthesis pathway;Dbxref=Genbank:YP_002405237.1,GeneID:7145292;gbkey=CDS;product=molybdopterin-guanine dinucleotide biosynthesis protein B;protein_id=YP_002405237.1;transl_table=11
NC_011748.1	RefSeq	gene	4425113	4425697	.	-	.	ID=gene4403;Name=mobA;Dbxref=GeneID:7146878;gbkey=Gene;gene=mobA;locus_tag=EC55989_4333
NC_011748.1	RefSeq	CDS	4425113	4425697	.	-	0	ID=cds4090;Name=YP_002405238.1;Parent=gene4403;Note=in Escherichia coli MobA links a guanosine 5%27-phosphate to molydopterin to form molybdopterin guanine dinucleotide during molybdenum cofactor biosynthesis;Dbxref=Genbank:YP_002405238.1,GeneID:7146878;gbkey=CDS;product=molybdopterin-guanine dinucleotide biosynthesis protein MobA;protein_id=YP_002405238.1;transl_table=11
NC_011748.1	RefSeq	gene	4425767	4426036	.	+	.	ID=gene4404;Name=yihD;Dbxref=GeneID:7146877;gbkey=Gene;gene=yihD;locus_tag=EC55989_4334
NC_011748.1	RefSeq	CDS	4425767	4426036	.	+	0	ID=cds4091;Name=YP_002405239.1;Parent=gene4404;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405239.1,GeneID:7146877;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405239.1;transl_table=11
NC_011748.1	RefSeq	gene	4426113	4427099	.	+	.	ID=gene4405;Name=yihE;Dbxref=GeneID:7149101;gbkey=Gene;gene=yihE;locus_tag=EC55989_4335
NC_011748.1	RefSeq	CDS	4426113	4427099	.	+	0	ID=cds4092;Name=YP_002405240.1;Parent=gene4405;Note=catalyzes the phosphorylation of protein substrates at serine and threonine residues in vitro%3B specific substrate in vivo has not been identified yet%3B plays a role in long-term cell survival and expression of surface appendages;Dbxref=Genbank:YP_002405240.1,GeneID:7149101;gbkey=CDS;product=serine%2Fthreonine protein kinase;protein_id=YP_002405240.1;transl_table=11
NC_011748.1	RefSeq	gene	4427116	4427742	.	+	.	ID=gene4406;Name=dsbA;Dbxref=GeneID:7149102;gbkey=Gene;gene=dsbA;locus_tag=EC55989_4336
NC_011748.1	RefSeq	CDS	4427116	4427742	.	+	0	ID=cds4093;Name=YP_002405241.1;Parent=gene4406;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 12498799%2C 93264419%2C 94016574%2C 94206930%2C 99298180%2C 10210188%2C 1429594%2C 1740115%2C 1934062%2C 8413591%2C 8494885%2C 8521518%2C 9194175%2C 9298646%2C 9300489%2C 9572841%2C 9600841%2C 9655827%3B Product type e : enzyme;Dbxref=Genbank:YP_002405241.1,GeneID:7149102;gbkey=CDS;product=protein disulfide isomerase I;protein_id=YP_002405241.1;transl_table=11
NC_011748.1	RefSeq	gene	4427897	4429327	.	+	.	ID=gene4407;Name=yihF;Dbxref=GeneID:7145950;gbkey=Gene;gene=yihF;locus_tag=EC55989_4337
NC_011748.1	RefSeq	CDS	4427897	4429327	.	+	0	ID=cds4094;Name=YP_002405242.1;Parent=gene4407;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405242.1,GeneID:7145950;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405242.1;transl_table=11
NC_011748.1	RefSeq	gene	4429368	4430300	.	-	.	ID=gene4408;Name=yihG;Dbxref=GeneID:7149103;gbkey=Gene;gene=yihG;locus_tag=EC55989_4338
NC_011748.1	RefSeq	CDS	4429368	4430300	.	-	0	ID=cds4095;Name=YP_002405243.1;Parent=gene4408;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002405243.1,GeneID:7149103;gbkey=CDS;product=acyltransferase;protein_id=YP_002405243.1;transl_table=11
NC_011748.1	RefSeq	gene	4430664	4433450	.	+	.	ID=gene4409;Name=polA;Dbxref=GeneID:7149104;gbkey=Gene;gene=polA;locus_tag=EC55989_4339
NC_011748.1	RefSeq	CDS	4430664	4433450	.	+	0	ID=cds4096;Name=YP_002405244.1;Parent=gene4409;Note=has 3%27-5%27 exonuclease%2C 5%27-3%27 exonuclease and 5%27-3%27polymerase activities%2C primarily functions to fill gaps during DNA replication and repair;Dbxref=Genbank:YP_002405244.1,GeneID:7149104;gbkey=CDS;product=DNA polymerase I;protein_id=YP_002405244.1;transl_table=11
NC_011748.1	RefSeq	gene	4433598	4433706	.	+	.	ID=gene4410;Name=spf;Dbxref=GeneID:7147207;gbkey=Gene;gene=spf;locus_tag=EC55989_misc_RNA_93
NC_011748.1	RefSeq	transcript	4433598	4433706	.	+	.	ID=rna187;Parent=gene4410;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 12101127%3B Product type n : RNA;Dbxref=GeneID:7147207;gbkey=misc_RNA;product=Spot42
NC_011748.1	RefSeq	exon	4433598	4433706	.	+	.	ID=id362;Parent=rna187;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 12101127%3B Product type n : RNA;Dbxref=GeneID:7147207;gbkey=misc_RNA;product=Spot42
NC_011748.1	RefSeq	gene	4433832	4434428	.	-	.	ID=gene4411;Name=engB;Dbxref=GeneID:7147692;gbkey=Gene;gene=engB;locus_tag=EC55989_4340
NC_011748.1	RefSeq	CDS	4433832	4434428	.	-	0	ID=cds4097;Name=YP_002405245.1;Parent=gene4411;Note=binds guanine nucleotides%3B in Escherichia coli depletion results in defective cell division and filamentation%3B in Bacillus subtilis this gene is essential;Dbxref=Genbank:YP_002405245.1,GeneID:7147692;gbkey=CDS;product=ribosome biogenesis GTP-binding protein YsxC;protein_id=YP_002405245.1;transl_table=11
NC_011748.1	RefSeq	gene	4434735	4434979	.	+	.	ID=gene4412;Name=csrC;Dbxref=GeneID:7149100;gbkey=Gene;gene=csrC;locus_tag=EC55989_misc_RNA_94
NC_011748.1	RefSeq	transcript	4434735	4434979	.	+	.	ID=rna188;Parent=gene4412;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 12694612%3B Product type n : RNA;Dbxref=GeneID:7149100;gbkey=misc_RNA;product=CsrC
NC_011748.1	RefSeq	exon	4434735	4434979	.	+	.	ID=id363;Parent=rna188;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 12694612%3B Product type n : RNA;Dbxref=GeneID:7149100;gbkey=misc_RNA;product=CsrC
NC_011748.1	RefSeq	gene	4435046	4435555	.	+	.	ID=gene4413;Name=yihI;Dbxref=GeneID:7145785;gbkey=Gene;gene=yihI;locus_tag=EC55989_4341
NC_011748.1	RefSeq	CDS	4435046	4435555	.	+	0	ID=cds4098;Name=YP_002405246.1;Parent=gene4413;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405246.1,GeneID:7145785;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405246.1;transl_table=11
NC_011748.1	RefSeq	gene	4435744	4437117	.	+	.	ID=gene4414;Name=hemN;Dbxref=GeneID:7149105;gbkey=Gene;gene=hemN;locus_tag=EC55989_4342
NC_011748.1	RefSeq	CDS	4435744	4437117	.	+	0	ID=cds4099;Name=YP_002405247.1;Parent=gene4414;Note=catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III;Dbxref=Genbank:YP_002405247.1,GeneID:7149105;gbkey=CDS;product=coproporphyrinogen III oxidase;protein_id=YP_002405247.1;transl_table=11
NC_011748.1	RefSeq	gene	4437529	4438938	.	-	.	ID=gene4415;Name=glnG;Dbxref=GeneID:7146416;gbkey=Gene;gene=glnG;locus_tag=EC55989_4343
NC_011748.1	RefSeq	CDS	4437529	4438938	.	-	0	ID=cds4100;Name=YP_002405248.1;Parent=gene4415;Note=response regulator of a two-component regulatory system involved in the activation of nitrogen assimilation genes%3B interacts with sigma-54;Dbxref=Genbank:YP_002405248.1,GeneID:7146416;gbkey=CDS;product=nitrogen regulation protein NR%28I%29;protein_id=YP_002405248.1;transl_table=11
NC_011748.1	RefSeq	gene	4438950	4439999	.	-	.	ID=gene4416;Name=glnL;Dbxref=GeneID:7146306;gbkey=Gene;gene=glnL;locus_tag=EC55989_4344
NC_011748.1	RefSeq	CDS	4438950	4439999	.	-	0	ID=cds4101;Name=YP_002405249.1;Parent=gene4416;Note=sensory histidine kinase in two-component regulatory system with GlnG%3B acts as a signal transducer which responds to the nitrogen level of cell and modulates the activity of ntrC by phosphorylation%2Fdephosphorylation;Dbxref=Genbank:YP_002405249.1,GeneID:7146306;gbkey=CDS;product=nitrogen regulation protein NR%28II%29;protein_id=YP_002405249.1;transl_table=11
NC_011748.1	RefSeq	gene	4440285	4441694	.	-	.	ID=gene4417;Name=glnA;Dbxref=GeneID:7146309;gbkey=Gene;gene=glnA;locus_tag=EC55989_4345
NC_011748.1	RefSeq	CDS	4440285	4441694	.	-	0	ID=cds4102;Name=YP_002405250.1;Parent=gene4417;Note=forms a homododecamer%3B forms glutamine from ammonia and glutamate with the conversion of ATP to ADP and phosphate%3B also functions in the assimilation of ammonia%3B highly regulated protein controlled by the addition%2Fremoval of adenylyl groups by adenylyltransferase from specific tyrosine residues%3B addition of adenylyl groups results in inactivation of the enzyme;Dbxref=Genbank:YP_002405250.1,GeneID:7146309;gbkey=CDS;product=glutamine synthetase;protein_id=YP_002405250.1;transl_table=11
NC_011748.1	RefSeq	gene	4441822	4441974	.	-	.	ID=gene4418;Name=EC55989_4346;Dbxref=GeneID:7146302;gbkey=Gene;locus_tag=EC55989_4346
NC_011748.1	RefSeq	CDS	4441822	4441974	.	-	0	ID=cds4103;Name=YP_002405251.1;Parent=gene4418;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405251.1,GeneID:7146302;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405251.1;transl_table=11
NC_011748.1	RefSeq	gene	4442067	4443890	.	+	.	ID=gene4419;Name=bipA;Dbxref=GeneID:7145082;gbkey=Gene;gene=bipA;locus_tag=EC55989_4347
NC_011748.1	RefSeq	CDS	4442067	4443890	.	+	0	ID=cds4104;Name=YP_002405252.1;Parent=gene4419;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 9642082%2C 7783627%2C 9298646%2C 9622352%3B Product type f : factor;Dbxref=Genbank:YP_002405252.1,GeneID:7145082;gbkey=CDS;product=GTP-binding protein;protein_id=YP_002405252.1;transl_table=11
NC_011748.1	RefSeq	gene	4444106	4444816	.	+	.	ID=gene4420;Name=yihL;Dbxref=GeneID:7145630;gbkey=Gene;gene=yihL;locus_tag=EC55989_4348
NC_011748.1	RefSeq	CDS	4444106	4444816	.	+	0	ID=cds4105;Name=YP_002405253.1;Parent=gene4420;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pr :  regulator;Dbxref=Genbank:YP_002405253.1,GeneID:7145630;gbkey=CDS;product=DNA-binding transcriptional regulator;protein_id=YP_002405253.1;transl_table=11
NC_011748.1	RefSeq	gene	4444824	4445804	.	+	.	ID=gene4421;Name=yihM;Dbxref=GeneID:7149106;gbkey=Gene;gene=yihM;locus_tag=EC55989_4349
NC_011748.1	RefSeq	CDS	4444824	4445804	.	+	0	ID=cds4106;Name=YP_002405254.1;Parent=gene4421;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002405254.1,GeneID:7149106;gbkey=CDS;product=sugar phosphate isomerase;protein_id=YP_002405254.1;transl_table=11
NC_011748.1	RefSeq	gene	4445906	4447171	.	+	.	ID=gene4422;Name=yihN;Dbxref=GeneID:7149107;gbkey=Gene;gene=yihN;locus_tag=EC55989_4350
NC_011748.1	RefSeq	CDS	4445906	4447171	.	+	0	ID=cds4107;Name=YP_002405255.1;Parent=gene4422;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002405255.1,GeneID:7149107;gbkey=CDS;product=transporter;protein_id=YP_002405255.1;transl_table=11
NC_011748.1	RefSeq	gene	4447282	4448070	.	-	.	ID=gene4423;Name=EC55989_4351;Dbxref=GeneID:7149108;gbkey=Gene;locus_tag=EC55989_4351
NC_011748.1	RefSeq	CDS	4447282	4448070	.	-	0	ID=cds4108;Name=YP_002405256.1;Parent=gene4423;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pr :  regulator;Dbxref=Genbank:YP_002405256.1,GeneID:7149108;gbkey=CDS;product=DEOR-type transcriptional regulator;protein_id=YP_002405256.1;transl_table=11
NC_011748.1	RefSeq	gene	4448110	4449045	.	-	.	ID=gene4424;Name=EC55989_4352;Dbxref=GeneID:7145083;gbkey=Gene;locus_tag=EC55989_4352
NC_011748.1	RefSeq	CDS	4448110	4449045	.	-	0	ID=cds4109;Name=YP_002405257.1;Parent=gene4424;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002405257.1,GeneID:7145083;gbkey=CDS;product=sugar kinase;protein_id=YP_002405257.1;transl_table=11
NC_011748.1	RefSeq	gene	4448978	4450057	.	+	.	ID=gene4425;Name=EC55989_4353;Dbxref=GeneID:7145084;gbkey=Gene;locus_tag=EC55989_4353
NC_011748.1	RefSeq	CDS	4448978	4450057	.	+	0	ID=cds4110;Name=YP_002405258.1;Parent=gene4425;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002405258.1,GeneID:7145084;gbkey=CDS;product=oxidoreductase with NAD%28P%29-binding Rossmann-fold domain%2C 3-hydroxyisobutyrate dehydrogenase;protein_id=YP_002405258.1;transl_table=11
NC_011748.1	RefSeq	gene	4450082	4450969	.	+	.	ID=gene4426;Name=EC55989_4354;Dbxref=GeneID:7145085;gbkey=Gene;locus_tag=EC55989_4354
NC_011748.1	RefSeq	CDS	4450082	4450969	.	+	0	ID=cds4111;Name=YP_002405259.1;Parent=gene4426;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002405259.1,GeneID:7145085;gbkey=CDS;product=aldolase yihT;protein_id=YP_002405259.1;transl_table=11
NC_011748.1	RefSeq	gene	4451002	4452012	.	+	.	ID=gene4427;Name=EC55989_4355;Dbxref=GeneID:7145086;gbkey=Gene;locus_tag=EC55989_4355
NC_011748.1	RefSeq	CDS	4451002	4452012	.	+	0	ID=cds4112;Name=YP_002405260.1;Parent=gene4427;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405260.1,GeneID:7145086;gbkey=CDS;product=dehydrogenase%2C GroES-like protein;protein_id=YP_002405260.1;transl_table=11
NC_011748.1	RefSeq	gene	4452082	4453515	.	+	.	ID=gene4428;Name=EC55989_4356;Dbxref=GeneID:7145087;gbkey=Gene;locus_tag=EC55989_4356
NC_011748.1	RefSeq	CDS	4452082	4453515	.	+	0	ID=cds4113;Name=YP_002405261.1;Parent=gene4428;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002405261.1,GeneID:7145087;gbkey=CDS;product=transporter;protein_id=YP_002405261.1;transl_table=11
NC_011748.1	RefSeq	gene	4453614	4454963	.	+	.	ID=gene4429;Name=EC55989_4357;Dbxref=GeneID:7145088;gbkey=Gene;locus_tag=EC55989_4357
NC_011748.1	RefSeq	CDS	4453614	4454963	.	+	0	ID=cds4114;Name=YP_002405262.1;Parent=gene4429;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002405262.1,GeneID:7145088;gbkey=CDS;product=transport protein;protein_id=YP_002405262.1;transl_table=11
NC_011748.1	RefSeq	gene	4454896	4455840	.	+	.	ID=gene4430;Name=EC55989_4358;Dbxref=GeneID:7145089;gbkey=Gene;locus_tag=EC55989_4358
NC_011748.1	RefSeq	CDS	4454896	4455840	.	+	0	ID=cds4115;Name=YP_002405263.1;Parent=gene4430;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405263.1,GeneID:7145089;gbkey=CDS;product=galactose mutarotase;protein_id=YP_002405263.1;transl_table=11
NC_011748.1	RefSeq	gene	4455981	4456580	.	+	.	ID=gene4431;Name=yihX;Dbxref=GeneID:7145090;gbkey=Gene;gene=yihX;locus_tag=EC55989_4359
NC_011748.1	RefSeq	CDS	4455981	4456580	.	+	0	ID=cds4116;Name=YP_002405264.1;Parent=gene4431;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002405264.1,GeneID:7145090;gbkey=CDS;product=phosphatase;protein_id=YP_002405264.1;transl_table=11
NC_011748.1	RefSeq	gene	4456574	4457446	.	+	.	ID=gene4432;Name=rbn;Dbxref=GeneID:7149109;gbkey=Gene;gene=rbn;locus_tag=EC55989_4360
NC_011748.1	RefSeq	CDS	4456574	4457446	.	+	0	ID=cds4117;Name=YP_002405265.1;Parent=gene4432;Note=RNase BN%3B required for 3%27 maturation of certain phage T4-encoded tRNAs%3B forms a dimer%3B specific for immature tRNA substrates containing incorrect residues within the universal CCA sequence%3B 3%27 to 5%27 exoribonuclease;Dbxref=Genbank:YP_002405265.1,GeneID:7149109;gbkey=CDS;product=ribonuclease BN;protein_id=YP_002405265.1;transl_table=11
NC_011748.1	RefSeq	gene	4457443	4457880	.	+	.	ID=gene4433;Name=dtd;Dbxref=GeneID:7147340;gbkey=Gene;gene=dtd;locus_tag=EC55989_4361
NC_011748.1	RefSeq	CDS	4457443	4457880	.	+	0	ID=cds4118;Name=YP_002405266.1;Parent=gene4433;Note=hydrolyzes D-tyrosyl-tRNA%28Tyr%29 into D-tyrosine and free tRNA%28Tyr%29%3B possible defense mechanism against a harmful effect of D-tyrosine;Dbxref=Genbank:YP_002405266.1,GeneID:7147340;gbkey=CDS;product=D-tyrosyl-tRNA%28Tyr%29 deacylase;protein_id=YP_002405266.1;transl_table=11
NC_011748.1	RefSeq	gene	4457877	4458866	.	+	.	ID=gene4434;Name=yiiD;Dbxref=GeneID:7145959;gbkey=Gene;gene=yiiD;locus_tag=EC55989_4362
NC_011748.1	RefSeq	CDS	4457877	4458866	.	+	0	ID=cds4119;Name=YP_002405267.1;Parent=gene4434;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002405267.1,GeneID:7145959;gbkey=CDS;product=acetyltransferase;protein_id=YP_002405267.1;transl_table=11
NC_011748.1	RefSeq	gene	4458930	4459913	.	-	.	ID=gene4435;Name=EC55989_4363;Dbxref=GeneID:7149110;gbkey=Gene;locus_tag=EC55989_4363
NC_011748.1	RefSeq	CDS	4458930	4459913	.	-	0	ID=cds4120;Name=YP_002405268.1;Parent=gene4435;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002405268.1,GeneID:7149110;gbkey=CDS;product=lipase;protein_id=YP_002405268.1;transl_table=11
NC_011748.1	RefSeq	gene	4460067	4460378	.	+	.	ID=gene4436;Name=EC55989_4364;Dbxref=GeneID:7145091;gbkey=Gene;locus_tag=EC55989_4364
NC_011748.1	RefSeq	CDS	4460067	4460378	.	+	0	ID=cds4121;Name=YP_002405269.1;Parent=gene4436;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405269.1,GeneID:7145091;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405269.1;transl_table=11
NC_011748.1	RefSeq	gene	4460379	4460669	.	+	.	ID=gene4437;Name=EC55989_4365;Dbxref=GeneID:7145092;gbkey=Gene;locus_tag=EC55989_4365
NC_011748.1	RefSeq	CDS	4460379	4460669	.	+	0	ID=cds4122;Name=YP_002405270.1;Parent=gene4437;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405270.1,GeneID:7145092;gbkey=CDS;product=transcriptional regulator;protein_id=YP_002405270.1;transl_table=11
NC_011748.1	RefSeq	gene	4461255	4461473	.	+	.	ID=gene4438;Name=yiiE;Dbxref=GeneID:7145093;gbkey=Gene;gene=yiiE;locus_tag=EC55989_4366
NC_011748.1	RefSeq	CDS	4461255	4461473	.	+	0	ID=cds4123;Name=YP_002405271.1;Parent=gene4438;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pr :  regulator;Dbxref=Genbank:YP_002405271.1,GeneID:7145093;gbkey=CDS;product=transcriptional regulator;protein_id=YP_002405271.1;transl_table=11
NC_011748.1	RefSeq	gene	4461717	4461935	.	+	.	ID=gene4439;Name=yiiF;Dbxref=GeneID:7149111;gbkey=Gene;gene=yiiF;locus_tag=EC55989_4367
NC_011748.1	RefSeq	CDS	4461717	4461935	.	+	0	ID=cds4124;Name=YP_002405272.1;Parent=gene4439;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405272.1,GeneID:7149111;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405272.1;transl_table=11
NC_011748.1	RefSeq	gene	4462265	4463194	.	-	.	ID=gene4440;Name=fdhE;Dbxref=GeneID:7149112;gbkey=Gene;gene=fdhE;locus_tag=EC55989_4368
NC_011748.1	RefSeq	CDS	4462265	4463194	.	-	0	ID=cds4125;Name=YP_002405273.1;Parent=gene4440;Note=required for the formation of active formate dehydrogenase;Dbxref=Genbank:YP_002405273.1,GeneID:7149112;gbkey=CDS;product=formate dehydrogenase accessory protein FdhE;protein_id=YP_002405273.1;transl_table=11
NC_011748.1	RefSeq	gene	4463191	4463826	.	-	.	ID=gene4441;Name=fdoI;Dbxref=GeneID:7146067;gbkey=Gene;gene=fdoI;locus_tag=EC55989_4369
NC_011748.1	RefSeq	CDS	4463191	4463826	.	-	0	ID=cds4126;Name=YP_002405274.1;Parent=gene4441;Note=cytochrome b556%28FDO%29 component%3B heme containing;Dbxref=Genbank:YP_002405274.1,GeneID:7146067;gbkey=CDS;product=formate dehydrogenase-O subunit gamma;protein_id=YP_002405274.1;transl_table=11
NC_011748.1	RefSeq	gene	4463823	4464725	.	-	.	ID=gene4442;Name=fdoH;Dbxref=GeneID:7146074;gbkey=Gene;gene=fdoH;locus_tag=EC55989_4370
NC_011748.1	RefSeq	CDS	4463823	4464725	.	-	0	ID=cds4127;Name=YP_002405275.1;Parent=gene4442;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 91317715%2C 8522521%2C 9852007%3B Product type c : carrier;Dbxref=Genbank:YP_002405275.1,GeneID:7146074;gbkey=CDS;product=formate dehydrogenase-O%2C Fe-S subunit;protein_id=YP_002405275.1;transl_table=11
NC_011748.1	RefSeq	gene	4464738	4467788	.	-	.	ID=gene4443;Name=fdoG;Dbxref=GeneID:7146073;gbkey=Gene;gene=fdoG;locus_tag=EC55989_4371
NC_011748.1	RefSeq	CDS	4464738	4467788	.	-	0	ID=cds4128;Name=YP_002405276.1;Parent=gene4443;Note=Evidence 1c : Function experimentally demonstrated in the studied genus%3B Product type e : enzyme;Dbxref=Genbank:YP_002405276.1,GeneID:7146073;gbkey=CDS;product=formate dehydrogenase-O%2C large subunit;protein_id=YP_002405276.1;transl_except=%28pos:complement%284467201..4467203%29%2Caa%3DOTHER%29;transl_table=11
NC_011748.1	RefSeq	gene	4467982	4468815	.	+	.	ID=gene4444;Name=fdhD;Dbxref=GeneID:7146072;gbkey=Gene;gene=fdhD;locus_tag=EC55989_4373
NC_011748.1	RefSeq	CDS	4467982	4468815	.	+	0	ID=cds4129;Name=YP_002405277.1;Parent=gene4444;Note=involved in the production or activity of formate dehydrogenase-H which is active when nitrate is not present during anaerobic growth;Dbxref=Genbank:YP_002405277.1,GeneID:7146072;gbkey=CDS;product=formate dehydrogenase accessory protein;protein_id=YP_002405277.1;transl_table=11
NC_011748.1	RefSeq	gene	4468968	4470008	.	+	.	ID=gene4445;Name=yiiG;Dbxref=GeneID:7146066;gbkey=Gene;gene=yiiG;locus_tag=EC55989_4374
NC_011748.1	RefSeq	CDS	4468968	4470008	.	+	0	ID=cds4130;Name=YP_002405278.1;Parent=gene4445;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405278.1,GeneID:7146066;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405278.1;transl_table=11
NC_011748.1	RefSeq	gene	4470058	4471806	.	-	.	ID=gene4446;Name=frvR;Dbxref=GeneID:7149113;gbkey=Gene;gene=frvR;locus_tag=EC55989_4375
NC_011748.1	RefSeq	CDS	4470058	4471806	.	-	0	ID=cds4131;Name=YP_002405279.1;Parent=gene4446;Note=repressor of the frv operon%2C involved in phosphoenolpyruvate:sugar phosphotransferase system;Dbxref=Genbank:YP_002405279.1,GeneID:7149113;gbkey=CDS;product=frv operon regulatory protein;protein_id=YP_002405279.1;transl_table=11
NC_011748.1	RefSeq	gene	4471806	4472876	.	-	.	ID=gene4447;Name=frvX;Dbxref=GeneID:7146201;gbkey=Gene;gene=frvX;locus_tag=EC55989_4376
NC_011748.1	RefSeq	CDS	4471806	4472876	.	-	0	ID=cds4132;Name=YP_002405280.1;Parent=gene4447;Note=with FrvABR is part of the phosphoenolpyruvate-dependent sugar phosphotransferase system which may be involved in the transport and phosphorylation of sugars;Dbxref=Genbank:YP_002405280.1,GeneID:7146201;gbkey=CDS;product=fructose-specific phosphotransferase system protein FrvX;protein_id=YP_002405280.1;transl_table=11
NC_011748.1	RefSeq	gene	4472866	4474317	.	-	.	ID=gene4448;Name=frvB;Dbxref=GeneID:7146202;gbkey=Gene;gene=frvB;locus_tag=EC55989_4377
NC_011748.1	RefSeq	CDS	4472866	4474317	.	-	0	ID=cds4133;Name=YP_002405281.1;Parent=gene4448;Note=Evidence 2b : Function of strongly homologous gene%3B PubMedId : 94290319%3B Product type t : transporter;Dbxref=Genbank:YP_002405281.1,GeneID:7146202;gbkey=CDS;product=PTS system transporter subunits IIBC;protein_id=YP_002405281.1;transl_table=11
NC_011748.1	RefSeq	gene	4474328	4474774	.	-	.	ID=gene4449;Name=frvA;Dbxref=GeneID:7146200;gbkey=Gene;gene=frvA;locus_tag=EC55989_4378
NC_011748.1	RefSeq	CDS	4474328	4474774	.	-	0	ID=cds4134;Name=YP_002405282.1;Parent=gene4449;Note=with FrvBRX is part of the phosphoenolpyruvate-dependent sugar phosphotransferase system involved in the transport and phosphorylation of sugars%3B possibly responsible for the sugar specificity of the system;Dbxref=Genbank:YP_002405282.1,GeneID:7146200;gbkey=CDS;product=fructose-like phosphotransferase system subunit EIIA;protein_id=YP_002405282.1;transl_table=11
NC_011748.1	RefSeq	gene	4475087	4475401	.	-	.	ID=gene4450;Name=yiiL;Dbxref=GeneID:7146199;gbkey=Gene;gene=yiiL;locus_tag=EC55989_4379
NC_011748.1	RefSeq	CDS	4475087	4475401	.	-	0	ID=cds4135;Name=YP_002405283.1;Parent=gene4450;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 15060078%3B Product type e : enzyme;Dbxref=Genbank:YP_002405283.1,GeneID:7146199;gbkey=CDS;product=L-rhamnose mutarotase;protein_id=YP_002405283.1;transl_table=11
NC_011748.1	RefSeq	gene	4475411	4476235	.	-	.	ID=gene4451;Name=rhaD;Dbxref=GeneID:7149114;gbkey=Gene;gene=rhaD;locus_tag=EC55989_4380
NC_011748.1	RefSeq	CDS	4475411	4476235	.	-	0	ID=cds4136;Name=YP_002405284.1;Parent=gene4451;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 90128204%2C 93374854%2C 8396120%3B Product type e : enzyme;Dbxref=Genbank:YP_002405284.1,GeneID:7149114;gbkey=CDS;product=rhamnulose-1-phosphate aldolase;protein_id=YP_002405284.1;transl_table=11
NC_011748.1	RefSeq	gene	4476477	4477736	.	-	.	ID=gene4452;Name=rhaA;Dbxref=GeneID:7147392;gbkey=Gene;gene=rhaA;locus_tag=EC55989_4381
NC_011748.1	RefSeq	CDS	4476477	4477736	.	-	0	ID=cds4137;Name=YP_002405285.1;Parent=gene4452;Note=catalyzes the formation of L-rhamnulose from L-rhamnose;Dbxref=Genbank:YP_002405285.1,GeneID:7147392;gbkey=CDS;product=L-rhamnose isomerase;protein_id=YP_002405285.1;transl_table=11
NC_011748.1	RefSeq	gene	4477733	4479202	.	-	.	ID=gene4453;Name=rhaB;Dbxref=GeneID:7147390;gbkey=Gene;gene=rhaB;locus_tag=EC55989_4382
NC_011748.1	RefSeq	CDS	4477733	4479202	.	-	0	ID=cds4138;Name=YP_002405286.1;Parent=gene4453;Note=catalyzes the ATP-dependent phosphorylation of rhamnulose;Dbxref=Genbank:YP_002405286.1,GeneID:7147390;gbkey=CDS;product=rhamnulokinase;protein_id=YP_002405286.1;transl_table=11
NC_011748.1	RefSeq	gene	4479490	4480326	.	+	.	ID=gene4454;Name=rhaS;Dbxref=GeneID:7147391;gbkey=Gene;gene=rhaS;locus_tag=EC55989_4384
NC_011748.1	RefSeq	CDS	4479490	4480326	.	+	0	ID=cds4139;Name=YP_002405287.1;Parent=gene4454;Note=activates the expression of the rhaBAD operon and rhaT gene;Dbxref=Genbank:YP_002405287.1,GeneID:7147391;gbkey=CDS;product=transcriptional activator RhaS;protein_id=YP_002405287.1;transl_table=11
NC_011748.1	RefSeq	gene	4480310	4481248	.	+	.	ID=gene4455;Name=rhaR;Dbxref=GeneID:7147394;gbkey=Gene;gene=rhaR;locus_tag=EC55989_4385
NC_011748.1	RefSeq	CDS	4480310	4481248	.	+	0	ID=cds4140;Name=YP_002405288.1;Parent=gene4455;Note=activates the expression of rhaRS in response to L-rhamnose;Dbxref=Genbank:YP_002405288.1,GeneID:7147394;gbkey=CDS;product=transcriptional activator RhaR;protein_id=YP_002405288.1;transl_table=11
NC_011748.1	RefSeq	gene	4481245	4482279	.	-	.	ID=gene4456;Name=rhaT;Dbxref=GeneID:7147393;gbkey=Gene;gene=rhaT;locus_tag=EC55989_4386
NC_011748.1	RefSeq	CDS	4481245	4482279	.	-	0	ID=cds4141;Name=YP_002405289.1;Parent=gene4456;Note=transports L-rhamnose and L-lyxose into the cell;Dbxref=Genbank:YP_002405289.1,GeneID:7147393;gbkey=CDS;product=rhamnose-proton symporter;protein_id=YP_002405289.1;transl_table=11
NC_011748.1	RefSeq	gene	4482564	4483184	.	+	.	ID=gene4457;Name=sodA;Dbxref=GeneID:7147395;gbkey=Gene;gene=sodA;locus_tag=EC55989_4387
NC_011748.1	RefSeq	CDS	4482564	4483184	.	+	0	ID=cds4142;Name=YP_002405290.1;Parent=gene4457;Note=SodA%3B manganese binding%3B only present under aerobic conditions%3B destroys free radicals;Dbxref=Genbank:YP_002405290.1,GeneID:7147395;gbkey=CDS;product=superoxide dismutase;protein_id=YP_002405290.1;transl_table=11
NC_011748.1	RefSeq	gene	4483402	4484376	.	+	.	ID=gene4458;Name=kdgT;Dbxref=GeneID:7147671;gbkey=Gene;gene=kdgT;locus_tag=EC55989_4388
NC_011748.1	RefSeq	CDS	4483402	4484376	.	+	0	ID=cds4143;Name=YP_002405291.1;Parent=gene4458;Note=transports degraded pectin products into the bacterial cell;Dbxref=Genbank:YP_002405291.1,GeneID:7147671;gbkey=CDS;product=2-keto-3-deoxygluconate permease;protein_id=YP_002405291.1;transl_table=11
NC_011748.1	RefSeq	gene	4484574	4485248	.	+	.	ID=gene4459;Name=yiiM;Dbxref=GeneID:7146653;gbkey=Gene;gene=yiiM;locus_tag=EC55989_4389
NC_011748.1	RefSeq	CDS	4484574	4485248	.	+	0	ID=cds4144;Name=YP_002405292.1;Parent=gene4459;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405292.1,GeneID:7146653;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405292.1;transl_table=11
NC_011748.1	RefSeq	gene	4485354	4486727	.	-	.	ID=gene4460;Name=cpxA;Dbxref=GeneID:7149115;gbkey=Gene;gene=cpxA;locus_tag=EC55989_4390
NC_011748.1	RefSeq	CDS	4485354	4486727	.	-	0	ID=cds4145;Name=YP_002405293.1;Parent=gene4460;Note=part of two-component CpxA%2FCpxR system%3B senses envelope stress%3B upregulates a number of periplasmic folding and trafficking factors;Dbxref=Genbank:YP_002405293.1,GeneID:7149115;gbkey=CDS;product=two-component sensor protein;protein_id=YP_002405293.1;transl_table=11
NC_011748.1	RefSeq	gene	4486724	4487422	.	-	.	ID=gene4461;Name=cpxR;Dbxref=GeneID:7145748;gbkey=Gene;gene=cpxR;locus_tag=EC55989_4391
NC_011748.1	RefSeq	CDS	4486724	4487422	.	-	0	ID=cds4146;Name=YP_002405294.1;Parent=gene4461;Note=response regulator in two-component regulatory system with CpxA%3B part of the envelope stress response system;Dbxref=Genbank:YP_002405294.1,GeneID:7145748;gbkey=CDS;product=DNA-binding transcriptional regulator CpxR;protein_id=YP_002405294.1;transl_table=11
NC_011748.1	RefSeq	gene	4487572	4488072	.	+	.	ID=gene4462;Name=cpxP;Dbxref=GeneID:7145750;gbkey=Gene;gene=cpxP;locus_tag=EC55989_4392
NC_011748.1	RefSeq	CDS	4487572	4488072	.	+	0	ID=cds4147;Name=YP_002405295.1;Parent=gene4462;Note=repressor of the Cpx envelope stress response pathway which occurs via periplasmic interactions with CpxA%3B CpxP is degraded by DegP protease especially in the presence of misfolded substrates;Dbxref=Genbank:YP_002405295.1,GeneID:7145750;gbkey=CDS;product=repressor CpxP;protein_id=YP_002405295.1;transl_table=11
NC_011748.1	RefSeq	gene	4488221	4489123	.	+	.	ID=gene4463;Name=fieF;Dbxref=GeneID:7145749;gbkey=Gene;gene=fieF;locus_tag=EC55989_4393
NC_011748.1	RefSeq	CDS	4488221	4489123	.	+	0	ID=cds4148;Name=YP_002405296.1;Parent=gene4463;Note=member of cation diffusion facilitator family%3B CDF%3B membrane-bound%3B induced by both zinc and iron%2C but does not induce resistance to zinc%3B can transport zinc%28II%29 in a proton-dependent manner%3B instead this protein induces iron resistance%3B forms dimers;Dbxref=Genbank:YP_002405296.1,GeneID:7145749;gbkey=CDS;product=ferrous iron efflux protein F;protein_id=YP_002405296.1;transl_table=11
NC_011748.1	RefSeq	gene	4489304	4490266	.	+	.	ID=gene4464;Name=pfkA;Dbxref=GeneID:7146108;gbkey=Gene;gene=pfkA;locus_tag=EC55989_4394
NC_011748.1	RefSeq	CDS	4489304	4490266	.	+	0	ID=cds4149;Name=YP_002405297.1;Parent=gene4464;Note=catalyzes the formation of D-fructose 1%2C6-bisphosphate from D-fructose 6-phosphate in glycolysis;Dbxref=Genbank:YP_002405297.1,GeneID:7146108;gbkey=CDS;product=6-phosphofructokinase;protein_id=YP_002405297.1;transl_table=11
NC_011748.1	RefSeq	gene	4490586	4491575	.	+	.	ID=gene4465;Name=sbp;Dbxref=GeneID:7147139;gbkey=Gene;gene=sbp;locus_tag=EC55989_4395
NC_011748.1	RefSeq	CDS	4490586	4491575	.	+	0	ID=cds4150;Name=YP_002405298.1;Parent=gene4465;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 91161616%2C 2002055%2C 3158524%2C 8774726%2C 9298646%3B Product type t : transporter;Dbxref=Genbank:YP_002405298.1,GeneID:7147139;gbkey=CDS;product=sulfate transporter subunit;protein_id=YP_002405298.1;transl_table=11
NC_011748.1	RefSeq	gene	4491682	4492437	.	+	.	ID=gene4466;Name=cdh;Dbxref=GeneID:7147611;gbkey=Gene;gene=cdh;locus_tag=EC55989_4396
NC_011748.1	RefSeq	CDS	4491682	4492437	.	+	0	ID=cds4151;Name=YP_002405299.1;Parent=gene4466;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 86008270%2C 2995360%2C 3158524%3B Product type e : enzyme;Dbxref=Genbank:YP_002405299.1,GeneID:7147611;gbkey=CDS;product=CDP-diacylglycerol pyrophosphatase;protein_id=YP_002405299.1;transl_table=11
NC_011748.1	RefSeq	gene	4492492	4493259	.	-	.	ID=gene4467;Name=tpiA;Dbxref=GeneID:7145684;gbkey=Gene;gene=tpiA;locus_tag=EC55989_4397
NC_011748.1	RefSeq	CDS	4492492	4493259	.	-	0	ID=cds4152;Name=YP_002405300.1;Parent=gene4467;Note=Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate;Dbxref=Genbank:YP_002405300.1,GeneID:7145684;gbkey=CDS;product=triosephosphate isomerase;protein_id=YP_002405300.1;transl_table=11
NC_011748.1	RefSeq	gene	4493367	4493966	.	-	.	ID=gene4468;Name=yiiQ;Dbxref=GeneID:7147830;gbkey=Gene;gene=yiiQ;locus_tag=EC55989_4398
NC_011748.1	RefSeq	CDS	4493367	4493966	.	-	0	ID=cds4153;Name=YP_002405301.1;Parent=gene4468;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405301.1,GeneID:7147830;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405301.1;transl_table=11
NC_011748.1	RefSeq	gene	4494067	4494507	.	+	.	ID=gene4469;Name=yiiR;Dbxref=GeneID:7149116;gbkey=Gene;gene=yiiR;locus_tag=EC55989_4399
NC_011748.1	RefSeq	CDS	4494067	4494507	.	+	0	ID=cds4154;Name=YP_002405302.1;Parent=gene4469;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002405302.1,GeneID:7149116;gbkey=CDS;product=inner membrane protein;protein_id=YP_002405302.1;transl_table=11
NC_011748.1	RefSeq	gene	4494719	4495018	.	+	.	ID=gene4470;Name=yiiS;Dbxref=GeneID:7149117;gbkey=Gene;gene=yiiS;locus_tag=EC55989_4400
NC_011748.1	RefSeq	CDS	4494719	4495018	.	+	0	ID=cds4155;Name=YP_002405303.1;Parent=gene4470;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405303.1,GeneID:7149117;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405303.1;transl_table=11
NC_011748.1	RefSeq	gene	4495045	4495473	.	+	.	ID=gene4471;Name=yiiT;Dbxref=GeneID:7149118;gbkey=Gene;gene=yiiT;locus_tag=EC55989_4401
NC_011748.1	RefSeq	CDS	4495045	4495473	.	+	0	ID=cds4156;Name=YP_002405304.1;Parent=gene4471;Note=with UspC and Usp E is involved in resistance to UV radiation;Dbxref=Genbank:YP_002405304.1,GeneID:7149118;gbkey=CDS;product=universal stress protein UspD;protein_id=YP_002405304.1;transl_table=11
NC_011748.1	RefSeq	gene	4495478	4496224	.	-	.	ID=gene4472;Name=fpr;Dbxref=GeneID:7149119;gbkey=Gene;gene=fpr;locus_tag=EC55989_4402
NC_011748.1	RefSeq	CDS	4495478	4496224	.	-	0	ID=cds4157;Name=YP_002405305.1;Parent=gene4472;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 93194782%2C 94092163%2C 95050480%2C 95362685%2C 1400248%2C 2834327%2C 7961651%2C 8449868%2C 9149148%3B Product type e : enzyme;Dbxref=Genbank:YP_002405305.1,GeneID:7149119;gbkey=CDS;product=ferredoxin-NADP reductase;protein_id=YP_002405305.1;transl_table=11
NC_011748.1	RefSeq	gene	4496321	4497331	.	-	.	ID=gene4473;Name=glpX;Dbxref=GeneID:7146177;gbkey=Gene;gene=glpX;locus_tag=EC55989_4403
NC_011748.1	RefSeq	CDS	4496321	4497331	.	-	0	ID=cds4158;Name=YP_002405306.1;Parent=gene4473;Note=type II fructose 1%2C6-bisphosphatae%3B in Escherichia coli this protein forms a dimer and binds manganese;Dbxref=Genbank:YP_002405306.1,GeneID:7146177;gbkey=CDS;product=fructose 1%2C6-bisphosphatase II;protein_id=YP_002405306.1;transl_table=11
NC_011748.1	RefSeq	gene	4497467	4498975	.	-	.	ID=gene4474;Name=glpK;Dbxref=GeneID:7146326;gbkey=Gene;gene=glpK;locus_tag=EC55989_4404
NC_011748.1	RefSeq	CDS	4497467	4498975	.	-	0	ID=cds4159;Name=YP_002405307.1;Parent=gene4474;Note=Converts glycerol and ADP to glycerol-3-phosphate and ADP;Dbxref=Genbank:YP_002405307.1,GeneID:7146326;gbkey=CDS;product=glycerol kinase;protein_id=YP_002405307.1;transl_table=11
NC_011748.1	RefSeq	gene	4498998	4499843	.	-	.	ID=gene4475;Name=glpF;Dbxref=GeneID:7146322;gbkey=Gene;gene=glpF;locus_tag=EC55989_4405
NC_011748.1	RefSeq	CDS	4498998	4499843	.	-	0	ID=cds4160;Name=YP_002405308.1;Parent=gene4475;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 12629974%2C 12948772%2C 14646142%2C 15004242%2C 90094250%2C 92210584%2C 11039922%2C 11101882%2C 11226336%2C 11964478%2C 1372899%2C 2544860%2C 6998951%3B Product type t : transporter;Dbxref=Genbank:YP_002405308.1,GeneID:7146322;gbkey=CDS;product=glycerol facilitator;protein_id=YP_002405308.1;transl_table=11
NC_011748.1	RefSeq	gene	4500269	4500514	.	+	.	ID=gene4476;Name=yiiU;Dbxref=GeneID:7146320;gbkey=Gene;gene=yiiU;locus_tag=EC55989_4406
NC_011748.1	RefSeq	CDS	4500269	4500514	.	+	0	ID=cds4161;Name=YP_002405309.1;Parent=gene4476;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405309.1,GeneID:7146320;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405309.1;transl_table=11
NC_011748.1	RefSeq	gene	4500599	4501084	.	-	.	ID=gene4477;Name=rraA;Dbxref=GeneID:7149120;gbkey=Gene;gene=rraA;locus_tag=EC55989_4407
NC_011748.1	RefSeq	CDS	4500599	4501084	.	-	0	ID=cds4162;Name=YP_002405310.1;Parent=gene4477;Note=regulator of RNase E%3B increases half-life and abundance of RNAs%3B interacts with RNase E possibly inhibiting catalytic activity;Dbxref=Genbank:YP_002405310.1,GeneID:7149120;gbkey=CDS;product=ribonuclease activity regulator protein RraA;protein_id=YP_002405310.1;transl_table=11
NC_011748.1	RefSeq	gene	4501177	4502103	.	-	.	ID=gene4478;Name=menA;Dbxref=GeneID:7147526;gbkey=Gene;gene=menA;locus_tag=EC55989_4408
NC_011748.1	RefSeq	CDS	4501177	4502103	.	-	0	ID=cds4163;Name=YP_002405311.1;Parent=gene4478;Note=catalyzes the formation of dimethylmenaquinone from 1%2C4-dihydroxy-2-naphthoate and octaprenyl diphosphate;Dbxref=Genbank:YP_002405311.1,GeneID:7147526;gbkey=CDS;product=1%2C4-dihydroxy-2-naphthoate octaprenyltransferase;protein_id=YP_002405311.1;transl_table=11
NC_011748.1	RefSeq	gene	4502170	4503501	.	-	.	ID=gene4479;Name=hslU;Dbxref=GeneID:7146817;gbkey=Gene;gene=hslU;locus_tag=EC55989_4409
NC_011748.1	RefSeq	CDS	4502170	4503501	.	-	0	ID=cds4164;Name=YP_002405312.1;Parent=gene4479;Note=heat shock protein involved in degradation of misfolded proteins;Dbxref=Genbank:YP_002405312.1,GeneID:7146817;gbkey=CDS;product=ATP-dependent protease ATP-binding subunit HslU;protein_id=YP_002405312.1;transl_table=11
NC_011748.1	RefSeq	gene	4503511	4504041	.	-	.	ID=gene4480;Name=hslV;Dbxref=GeneID:7146470;gbkey=Gene;gene=hslV;locus_tag=EC55989_4410
NC_011748.1	RefSeq	CDS	4503511	4504041	.	-	0	ID=cds4165;Name=YP_002405313.1;Parent=gene4480;Note=heat shock protein involved in degradation of misfolded proteins;Dbxref=Genbank:YP_002405313.1,GeneID:7146470;gbkey=CDS;product=ATP-dependent protease peptidase subunit;protein_id=YP_002405313.1;transl_table=11
NC_011748.1	RefSeq	gene	4504134	4505093	.	-	.	ID=gene4481;Name=ftsN;Dbxref=GeneID:7146471;gbkey=Gene;gene=ftsN;locus_tag=EC55989_4411
NC_011748.1	RefSeq	CDS	4504134	4505093	.	-	0	ID=cds4166;Name=YP_002405314.1;Parent=gene4481;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 9282742%2C 93285993%2C 8509333%3B Product type cp : cell process;Dbxref=Genbank:YP_002405314.1,GeneID:7146471;gbkey=CDS;product=cell division protein FtsN;protein_id=YP_002405314.1;transl_table=11
NC_011748.1	RefSeq	gene	4505185	4506210	.	-	.	ID=gene4482;Name=cytR;Dbxref=GeneID:7146217;gbkey=Gene;gene=cytR;locus_tag=EC55989_4412
NC_011748.1	RefSeq	CDS	4505185	4506210	.	-	0	ID=cds4167;Name=YP_002405315.1;Parent=gene4482;Note=negatively controls the transcription initiation of genes such as deoCABD%2C udp%2C and cdd encoding catabolizing enzymes and nupC%2C nupG%2C and tsx encoding transporting and pore-forming proteins;Dbxref=Genbank:YP_002405315.1,GeneID:7146217;gbkey=CDS;product=DNA-binding transcriptional regulator CytR;protein_id=YP_002405315.1;transl_table=11
NC_011748.1	RefSeq	gene	4506366	4508564	.	-	.	ID=gene4483;Name=priA;Dbxref=GeneID:7145838;gbkey=Gene;gene=priA;locus_tag=EC55989_4413
NC_011748.1	RefSeq	CDS	4506366	4508564	.	-	0	ID=cds4168;Name=YP_002405316.1;Parent=gene4483;Note=binding of PriA to forked DNA starts the assembly of the primosome%2C also possesses 3%27-5%27 helicase activity;Dbxref=Genbank:YP_002405316.1,GeneID:7145838;gbkey=CDS;product=primosome assembly protein PriA;protein_id=YP_002405316.1;transl_table=11
NC_011748.1	RefSeq	STS	4508025	4509545	.	+	.	ID=id364;Dbxref=UniSTS:506892;gbkey=STS
NC_011748.1	RefSeq	gene	4508767	4508979	.	+	.	ID=gene4484;Name=rpmE;Dbxref=GeneID:7147244;gbkey=Gene;gene=rpmE;locus_tag=EC55989_4414
NC_011748.1	RefSeq	CDS	4508767	4508979	.	+	0	ID=cds4169;Name=YP_002405317.1;Parent=gene4484;Note=RpmE%3B there appears to be two types of ribosomal proteins L31 in bacterial genomes%3B some contain a CxxC motif while others do not%3B Bacillus subtilis has both types%3B the proteins in this cluster have the CXXC motif%3B RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth%3B expression of ytiA is controlled by a zinc-specific transcriptional repressor%3B RpmE contains one zinc ion and a CxxC motif is responsible for this binding%3B forms an RNP particle along with proteins L5%2C L18%2C and L25 and 5S rRNA%3B found crosslinked to L2 and L25 and EF-G%3B may be near the peptidyltransferase site of the 50S ribosome;Dbxref=Genbank:YP_002405317.1,GeneID:7147244;gbkey=CDS;product=50S ribosomal protein L31;protein_id=YP_002405317.1;transl_table=11
NC_011748.1	RefSeq	gene	4509139	4513323	.	+	.	ID=gene4485;Name=rhsB;Dbxref=GeneID:7147490;gbkey=Gene;gene=rhsB;locus_tag=EC55989_4415
NC_011748.1	RefSeq	CDS	4509139	4513323	.	+	0	ID=cds4170;Name=YP_002405318.1;Parent=gene4485;Note=Evidence 2b : Function of strongly homologous gene%3B PubMedId : 98361897%2C 2403547%2C 2644231%2C 7934896%2C 8387990%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002405318.1,GeneID:7147490;gbkey=CDS;product=rhsB element core protein RshB;protein_id=YP_002405318.1;transl_table=11
NC_011748.1	RefSeq	gene	4513617	4513931	.	-	.	ID=gene4486;Name=EC55989_4416;Dbxref=GeneID:7147401;gbkey=Gene;locus_tag=EC55989_4416
NC_011748.1	RefSeq	CDS	4513617	4513931	.	-	0	ID=cds4171;Name=YP_002405319.1;Parent=gene4486;Note=Evidence 2b : Function of strongly homologous gene%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002405319.1,GeneID:7147401;gbkey=CDS;product=iso-IS1 InsB protein%2C transposase;protein_id=YP_002405319.1;transl_table=11
NC_011748.1	RefSeq	gene	4513925	4514110	.	-	.	ID=gene4487;Name=EC55989_4417;Dbxref=GeneID:7145094;gbkey=Gene;locus_tag=EC55989_4417;pseudo=true
NC_011748.1	RefSeq	region	4513925	4514110	.	-	.	ID=id365;Note=fragment of transposase InsB %28ORF2%29 IS1 %28partial%29%3BEvidence 7 : Gene remnant%3B Product type pe :  enzyme;Dbxref=GeneID:7145094;gbkey=misc_feature
NC_011748.1	RefSeq	gene	4514554	4514802	.	-	.	ID=gene4488;Name=yiiX;Dbxref=GeneID:7145095;gbkey=Gene;gene=yiiX;locus_tag=EC55989_4418;pseudo=true
NC_011748.1	RefSeq	region	4514554	4514802	.	-	.	ID=id366;Note=fragment of  peptidoglycan peptidase %28part 2%29%3BEvidence 7 : Gene remnant%3B Product type pe :  enzyme;Dbxref=GeneID:7145095;gbkey=misc_feature
NC_011748.1	RefSeq	gene	4514712	4515161	.	-	.	ID=gene4489;Name=yiiX;Dbxref=GeneID:7149121;gbkey=Gene;gene=yiiX;locus_tag=EC55989_4419;pseudo=true
NC_011748.1	RefSeq	region	4514712	4515161	.	-	.	ID=id367;Note=fragment of  peptidoglycan peptidase %28part 1%29%3BEvidence 7 : Gene remnant%3B Product type pe :  enzyme;Dbxref=GeneID:7149121;gbkey=misc_feature
NC_011748.1	RefSeq	gene	4515221	4515538	.	-	.	ID=gene4490;Name=metJ;Dbxref=GeneID:7149122;gbkey=Gene;gene=metJ;locus_tag=EC55989_4420
NC_011748.1	RefSeq	CDS	4515221	4515538	.	-	0	ID=cds4172;Name=YP_002405320.1;Parent=gene4490;Note=when combined with S-adenosylmethionine represses the expression of the methionine regulon and of proteins involved in S-adenosylmethionine synthesis;Dbxref=Genbank:YP_002405320.1,GeneID:7149122;gbkey=CDS;product=transcriptional repressor protein MetJ;protein_id=YP_002405320.1;transl_table=11
NC_011748.1	RefSeq	gene	4515815	4516975	.	+	.	ID=gene4491;Name=metB;Dbxref=GeneID:7146832;gbkey=Gene;gene=metB;locus_tag=EC55989_4421
NC_011748.1	RefSeq	CDS	4515815	4516975	.	+	0	ID=cds4173;Name=YP_002405321.1;Parent=gene4491;Note=catalyzes the formation of cystathionine from L-cysteine and O-succinyl-L-homoserine;Dbxref=Genbank:YP_002405321.1,GeneID:7146832;gbkey=CDS;product=cystathionine gamma-synthase;protein_id=YP_002405321.1;transl_table=11
NC_011748.1	RefSeq	gene	4516978	4519410	.	+	.	ID=gene4492;Name=metL;Dbxref=GeneID:7146825;gbkey=Gene;gene=metL;locus_tag=EC55989_4422
NC_011748.1	RefSeq	CDS	4516978	4519410	.	+	0	ID=cds4174;Name=YP_002405322.1;Parent=gene4492;Note=multifunctional homodimeric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine%3B functions in a number of amino acid biosynthetic pathways;Dbxref=Genbank:YP_002405322.1,GeneID:7146825;gbkey=CDS;product=bifunctional aspartate kinase II%2Fhomoserine dehydrogenase II;protein_id=YP_002405322.1;transl_table=11
NC_011748.1	RefSeq	gene	4519759	4520649	.	+	.	ID=gene4493;Name=metF;Dbxref=GeneID:7146834;gbkey=Gene;gene=metF;locus_tag=EC55989_4424
NC_011748.1	RefSeq	CDS	4519759	4520649	.	+	0	ID=cds4175;Name=YP_002405323.1;Parent=gene4493;Note=MTHFR%3B catalyzes NADH-linked reduction of 5%2C10-methylenetetrahydrofolate to 5-methyltetrahydrofolate using FAD as a cofactor;Dbxref=Genbank:YP_002405323.1,GeneID:7146834;gbkey=CDS;product=5%2C10-methylenetetrahydrofolate reductase;protein_id=YP_002405323.1;transl_table=11
NC_011748.1	RefSeq	gene	4520978	4523158	.	+	.	ID=gene4494;Name=katG;Dbxref=GeneID:7146828;gbkey=Gene;gene=katG;locus_tag=EC55989_4425
NC_011748.1	RefSeq	CDS	4520978	4523158	.	+	0	ID=cds4176;Name=YP_002405324.1;Parent=gene4494;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 90292022%2C 94209230%2C 3045098%3B Product type e : enzyme;Dbxref=Genbank:YP_002405324.1,GeneID:7146828;gbkey=CDS;product=catalase%2Fhydroperoxidase HPI%28I%29;protein_id=YP_002405324.1;transl_table=11
NC_011748.1	RefSeq	gene	4523252	4524157	.	+	.	ID=gene4495;Name=yijE;Dbxref=GeneID:7146646;gbkey=Gene;gene=yijE;locus_tag=EC55989_4426
NC_011748.1	RefSeq	CDS	4523252	4524157	.	+	0	ID=cds4177;Name=YP_002405325.1;Parent=gene4495;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002405325.1,GeneID:7146646;gbkey=CDS;product=permease;protein_id=YP_002405325.1;transl_table=11
NC_011748.1	RefSeq	gene	4524184	4524801	.	-	.	ID=gene4496;Name=yijF;Dbxref=GeneID:7149124;gbkey=Gene;gene=yijF;locus_tag=EC55989_4427
NC_011748.1	RefSeq	CDS	4524184	4524801	.	-	0	ID=cds4178;Name=YP_002405326.1;Parent=gene4496;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405326.1,GeneID:7149124;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405326.1;transl_table=11
NC_011748.1	RefSeq	gene	4525076	4526179	.	-	.	ID=gene4497;Name=gldA;Dbxref=GeneID:7149125;gbkey=Gene;gene=gldA;locus_tag=EC55989_4428
NC_011748.1	RefSeq	CDS	4525076	4526179	.	-	0	ID=cds4179;Name=YP_002405327.1;Parent=gene4497;Note=forms dimers and octamers%3B involved in conversion of glycerol to dihydroxy-acetone;Dbxref=Genbank:YP_002405327.1,GeneID:7149125;gbkey=CDS;product=glycerol dehydrogenase;protein_id=YP_002405327.1;transl_table=11
NC_011748.1	RefSeq	gene	4526190	4526852	.	-	.	ID=gene4498;Name=fsaB;Dbxref=GeneID:7146291;gbkey=Gene;gene=fsaB;locus_tag=EC55989_4429
NC_011748.1	RefSeq	CDS	4526190	4526852	.	-	0	ID=cds4180;Name=YP_002405328.1;Parent=gene4498;Note=similar to transaldolase from Escherichia coli%3B many organisms have multiple copies;Dbxref=Genbank:YP_002405328.1,GeneID:7146291;gbkey=CDS;product=fructose-6-phosphate aldolase;protein_id=YP_002405328.1;transl_table=11
NC_011748.1	RefSeq	gene	4526864	4529365	.	-	.	ID=gene4499;Name=ptsA;Dbxref=GeneID:7146207;gbkey=Gene;gene=ptsA;locus_tag=EC55989_4430
NC_011748.1	RefSeq	CDS	4526864	4529365	.	-	0	ID=cds4181;Name=YP_002405329.1;Parent=gene4499;Note=Evidence 2b : Function of strongly homologous gene%3B PubMedId : 95291446%2C 7773398%3B Product type t : transporter;Dbxref=Genbank:YP_002405329.1,GeneID:7146207;gbkey=CDS;product=fused PTS enzymes: Hpr component %3B enzyme I component %3B enzyme IIA component;protein_id=YP_002405329.1;transl_table=11
NC_011748.1	RefSeq	gene	4529674	4530753	.	+	.	ID=gene4500;Name=frwC;Dbxref=GeneID:7147285;gbkey=Gene;gene=frwC;locus_tag=EC55989_4431
NC_011748.1	RefSeq	CDS	4529674	4530753	.	+	0	ID=cds4182;Name=YP_002405330.1;Parent=gene4500;Note=FrwC with FrwB%2C FrwD and PtsA forms a PEP-dependent sugar phosphotransferase system permease which may phosphorylate and transport sugars into the cell%3B forms translocation channel and contains the specific substrate-binding site;Dbxref=Genbank:YP_002405330.1,GeneID:7147285;gbkey=CDS;product=fructose-like permease EIIC subunit 2;protein_id=YP_002405330.1;transl_table=11
NC_011748.1	RefSeq	gene	4530768	4531088	.	+	.	ID=gene4501;Name=frwB;Dbxref=GeneID:7146204;gbkey=Gene;gene=frwB;locus_tag=EC55989_4432
NC_011748.1	RefSeq	CDS	4530768	4531088	.	+	0	ID=cds4183;Name=YP_002405331.1;Parent=gene4501;Note=FrwB with FrwC%2C FrwD and PtsA forms a PEP-dependent sugar phosphotransferase system %28PTS%29 permease which may phosphorylate and transport sugars into the cell%3B cytoplasmic protein that interacts with complex EIIA%3B contains the second phosphorylation site of the PTS;Dbxref=Genbank:YP_002405331.1,GeneID:7146204;gbkey=CDS;product=PTS system fructose-like transporter subunit EIIB;protein_id=YP_002405331.1;transl_table=11
NC_011748.1	RefSeq	gene	4531139	4533436	.	+	.	ID=gene4502;Name=pflD;Dbxref=GeneID:7146203;gbkey=Gene;gene=pflD;locus_tag=EC55989_4433
NC_011748.1	RefSeq	CDS	4531139	4533436	.	+	0	ID=cds4184;Name=YP_002405332.1;Parent=gene4502;Note=involved in production of D-lactate from glucose under microaerobic conditions%3B cytoplasmic protein;Dbxref=Genbank:YP_002405332.1,GeneID:7146203;gbkey=CDS;product=formate acetyltransferase 2;protein_id=YP_002405332.1;transl_table=11
NC_011748.1	RefSeq	gene	4533402	4534280	.	+	.	ID=gene4503;Name=pflC;Dbxref=GeneID:7147144;gbkey=Gene;gene=pflC;locus_tag=EC55989_4434
NC_011748.1	RefSeq	CDS	4533402	4534280	.	+	0	ID=cds4185;Name=YP_002405333.1;Parent=gene4503;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 95291446%2C 14673546%2C 7773398%3B Product type e : enzyme;Dbxref=Genbank:YP_002405333.1,GeneID:7147144;gbkey=CDS;product=pyruvate formate lyase II activase;protein_id=YP_002405333.1;transl_table=11
NC_011748.1	RefSeq	gene	4534282	4534623	.	+	.	ID=gene4504;Name=frwD;Dbxref=GeneID:7147143;gbkey=Gene;gene=frwD;locus_tag=EC55989_4435
NC_011748.1	RefSeq	CDS	4534282	4534623	.	+	0	ID=cds4186;Name=YP_002405334.1;Parent=gene4504;Note=FrwD with FrwB%2C FrwC and PtsA forms a PEP-dependent sugar phosphotransferase system permease which may phosphorylate and transport sugars into the cell%3B phosphorylated by EIIA%3B FrwB homolog;Dbxref=Genbank:YP_002405334.1,GeneID:7147143;gbkey=CDS;product=fructose-like phosphotransferase EIIB subunit 3;protein_id=YP_002405334.1;transl_table=11
NC_011748.1	RefSeq	gene	4534610	4535461	.	-	.	ID=gene4505;Name=yijO;Dbxref=GeneID:7146205;gbkey=Gene;gene=yijO;locus_tag=EC55989_4436
NC_011748.1	RefSeq	CDS	4534610	4535461	.	-	0	ID=cds4187;Name=YP_002405335.1;Parent=gene4505;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pr :  regulator;Dbxref=Genbank:YP_002405335.1,GeneID:7146205;gbkey=CDS;product=DNA-binding transcriptional regulator;protein_id=YP_002405335.1;transl_table=11
NC_011748.1	RefSeq	gene	4535676	4537409	.	-	.	ID=gene4506;Name=yijP;Dbxref=GeneID:7149126;gbkey=Gene;gene=yijP;locus_tag=EC55989_4437
NC_011748.1	RefSeq	CDS	4535676	4537409	.	-	0	ID=cds4188;Name=YP_002405336.1;Parent=gene4506;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 10456927%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002405336.1,GeneID:7149126;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405336.1;transl_table=11
NC_011748.1	RefSeq	gene	4537592	4540243	.	-	.	ID=gene4507;Name=ppc;Dbxref=GeneID:7149127;gbkey=Gene;gene=ppc;locus_tag=EC55989_4438
NC_011748.1	RefSeq	CDS	4537592	4540243	.	-	0	ID=cds4189;Name=YP_002405337.1;Parent=gene4507;Note=catalyzes the formation of oxaloacetate from phosphoenolpyruvate;Dbxref=Genbank:YP_002405337.1,GeneID:7149127;gbkey=CDS;product=phosphoenolpyruvate carboxylase;protein_id=YP_002405337.1;transl_table=11
NC_011748.1	RefSeq	gene	4540595	4541746	.	-	.	ID=gene4508;Name=argE;Dbxref=GeneID:7147221;gbkey=Gene;gene=argE;locus_tag=EC55989_4439
NC_011748.1	RefSeq	CDS	4540595	4541746	.	-	0	ID=cds4190;Name=YP_002405338.1;Parent=gene4508;Note=catalyzes the formation of L-ornithine from N%282%29-acetyl-L-ornithine in arginine biosynthesis;Dbxref=Genbank:YP_002405338.1,GeneID:7147221;gbkey=CDS;product=acetylornithine deacetylase;protein_id=YP_002405338.1;transl_table=11
NC_011748.1	RefSeq	gene	4541900	4542904	.	+	.	ID=gene4509;Name=argC;Dbxref=GeneID:7145528;gbkey=Gene;gene=argC;locus_tag=EC55989_4440
NC_011748.1	RefSeq	CDS	4541900	4542904	.	+	0	ID=cds4191;Name=YP_002405339.1;Parent=gene4509;Note=catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis and the reduction of N-acetyl-gamma-aminoadipyl-phosphate to N-acetyl-L-aminoadipate-semialdehyde in lysine biosynthesis%3B involved in both the arginine and lysine biosynthetic pathways%3B lysine is produced via the AAA pathway%2C lysine from alpha-aminoadipate;Dbxref=Genbank:YP_002405339.1,GeneID:7145528;gbkey=CDS;product=N-acetyl-gamma-glutamyl-phosphate reductase;protein_id=YP_002405339.1;transl_table=11
NC_011748.1	RefSeq	gene	4542915	4543688	.	+	.	ID=gene4510;Name=argB;Dbxref=GeneID:7145526;gbkey=Gene;gene=argB;locus_tag=EC55989_4441
NC_011748.1	RefSeq	CDS	4542915	4543688	.	+	0	ID=cds4192;Name=YP_002405340.1;Parent=gene4510;Note=catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate;Dbxref=Genbank:YP_002405340.1,GeneID:7145526;gbkey=CDS;product=acetylglutamate kinase;protein_id=YP_002405340.1;transl_table=11
NC_011748.1	RefSeq	gene	4543749	4545122	.	+	.	ID=gene4511;Name=argH;Dbxref=GeneID:7145525;gbkey=Gene;gene=argH;locus_tag=EC55989_4442
NC_011748.1	RefSeq	CDS	4543749	4545122	.	+	0	ID=cds4193;Name=YP_002405341.1;Parent=gene4511;Note=catalyzes the formation of arginine from %28N-L-arginino%29succinate;Dbxref=Genbank:YP_002405341.1,GeneID:7145525;gbkey=CDS;product=argininosuccinate lyase;protein_id=YP_002405341.1;transl_table=11
NC_011748.1	RefSeq	gene	4545620	4546834	.	+	.	ID=gene4512;Name=rspA;Dbxref=GeneID:7145530;gbkey=Gene;gene=rspA;locus_tag=EC55989_4443
NC_011748.1	RefSeq	CDS	4545620	4546834	.	+	0	ID=cds4194;Name=YP_002405342.1;Parent=gene4512;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 93341455%2C 94310441%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002405342.1,GeneID:7145530;gbkey=CDS;product=enolase%2Fdehydratase;protein_id=YP_002405342.1;transl_table=11
NC_011748.1	RefSeq	gene	4546901	4548184	.	+	.	ID=gene4513;Name=EC55989_4444;Dbxref=GeneID:7147538;gbkey=Gene;locus_tag=EC55989_4444
NC_011748.1	RefSeq	CDS	4546901	4548184	.	+	0	ID=cds4195;Name=YP_002405343.1;Parent=gene4513;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002405343.1,GeneID:7147538;gbkey=CDS;product=transporter;protein_id=YP_002405343.1;transl_table=11
NC_011748.1	RefSeq	gene	4548230	4548339	.	-	.	ID=gene4514;Name=oxyS;Dbxref=GeneID:7145096;gbkey=Gene;gene=oxyS;locus_tag=EC55989_misc_RNA_95
NC_011748.1	RefSeq	transcript	4548230	4548339	.	-	.	ID=rna189;Parent=gene4514;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 9774349%3B Product type n : RNA;Dbxref=GeneID:7145096;gbkey=misc_RNA;product=OxyS
NC_011748.1	RefSeq	exon	4548230	4548339	.	-	.	ID=id368;Parent=rna189;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 9774349%3B Product type n : RNA;Dbxref=GeneID:7145096;gbkey=misc_RNA;product=OxyS
NC_011748.1	RefSeq	gene	4548435	4549352	.	+	.	ID=gene4515;Name=oxyR;Dbxref=GeneID:7147089;gbkey=Gene;gene=oxyR;locus_tag=EC55989_4446
NC_011748.1	RefSeq	CDS	4548435	4549352	.	+	0	ID=cds4196;Name=YP_002405344.1;Parent=gene4515;Note=Activates the expression of a regulon of hydrogen peroxide-inducible genes such as katG%2C gor%2C ahpC%2C ahpF%2C oxyS%2C dps%2C fur and grxA;Dbxref=Genbank:YP_002405344.1,GeneID:7147089;gbkey=CDS;product=DNA-binding transcriptional regulator OxyR;protein_id=YP_002405344.1;transl_table=11
NC_011748.1	RefSeq	gene	4549335	4550735	.	-	.	ID=gene4516;Name=sthA;Dbxref=GeneID:7147088;gbkey=Gene;gene=sthA;locus_tag=EC55989_4447
NC_011748.1	RefSeq	CDS	4549335	4550735	.	-	0	ID=cds4197;Name=YP_002405345.1;Parent=gene4516;Note=catalyzes the conversion of NADPH to NADH;Dbxref=Genbank:YP_002405345.1,GeneID:7147088;gbkey=CDS;product=soluble pyridine nucleotide transhydrogenase;protein_id=YP_002405345.1;transl_table=11
NC_011748.1	RefSeq	gene	4551012	4551716	.	+	.	ID=gene4517;Name=fabR;Dbxref=GeneID:7147724;gbkey=Gene;gene=fabR;locus_tag=EC55989_4448
NC_011748.1	RefSeq	CDS	4551012	4551716	.	+	0	ID=cds4198;Name=YP_002405346.1;Parent=gene4517;Note=negatively controls the expression of fabA and fabB%2C genes involved in the unsaturated fatty acid biosynthesis;Dbxref=Genbank:YP_002405346.1,GeneID:7147724;gbkey=CDS;product=DNA-binding transcriptional repressor FabR;protein_id=YP_002405346.1;transl_table=11
NC_011748.1	RefSeq	gene	4551716	4552075	.	+	.	ID=gene4518;Name=yijD;Dbxref=GeneID:7146053;gbkey=Gene;gene=yijD;locus_tag=EC55989_4449
NC_011748.1	RefSeq	CDS	4551716	4552075	.	+	0	ID=cds4199;Name=YP_002405347.1;Parent=gene4518;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002405347.1,GeneID:7146053;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405347.1;transl_table=11
NC_011748.1	RefSeq	gene	4552115	4553215	.	-	.	ID=gene4519;Name=trmA;Dbxref=GeneID:7149123;gbkey=Gene;gene=trmA;locus_tag=EC55989_4450
NC_011748.1	RefSeq	CDS	4552115	4553215	.	-	0	ID=cds4200;Name=YP_002405348.1;Parent=gene4519;Note=catalyzes the formation of 5-methyl-uridine at position 54 in all tRNAs;Dbxref=Genbank:YP_002405348.1,GeneID:7149123;gbkey=CDS;product=tRNA %28uracil-5-%29-methyltransferase;protein_id=YP_002405348.1;transl_table=11
NC_011748.1	RefSeq	gene	4553329	4553519	.	+	.	ID=gene4520;Name=EC55989_misc_RNA_96;Dbxref=GeneID:7147844;gbkey=Gene;locus_tag=EC55989_misc_RNA_96
NC_011748.1	RefSeq	transcript	4553329	4553519	.	+	.	ID=rna190;Parent=gene4520;Dbxref=GeneID:7147844;gbkey=misc_RNA;product=Cobalamin
NC_011748.1	RefSeq	exon	4553329	4553519	.	+	.	ID=id369;Parent=rna190;Dbxref=GeneID:7147844;gbkey=misc_RNA;product=Cobalamin
NC_011748.1	RefSeq	gene	4553584	4555428	.	+	.	ID=gene4521;Name=btuB;Dbxref=GeneID:7145314;gbkey=Gene;gene=btuB;locus_tag=EC55989_4451
NC_011748.1	RefSeq	CDS	4553584	4555428	.	+	0	ID=cds4201;Name=YP_002405349.1;Parent=gene4521;Note=involved in the active translocation of vitamin B12 %28cyanocobalamin%29 across the outer membrane to the periplasmic space;Dbxref=Genbank:YP_002405349.1,GeneID:7145314;gbkey=CDS;product=vitamin B12%2Fcobalamin outer membrane transporter;protein_id=YP_002405349.1;transl_table=11
NC_011748.1	RefSeq	gene	4555373	4556230	.	+	.	ID=gene4522;Name=murI;Dbxref=GeneID:7145639;gbkey=Gene;gene=murI;locus_tag=EC55989_4452
NC_011748.1	RefSeq	CDS	4555373	4556230	.	+	0	ID=cds4202;Name=YP_002405350.1;Parent=gene4522;Note=converts L-glutamate to D-glutamate%2C a component of peptidoglycan;Dbxref=Genbank:YP_002405350.1,GeneID:7145639;gbkey=CDS;product=glutamate racemase;protein_id=YP_002405350.1;transl_table=11
NC_011748.1	RefSeq	gene	4556604	4558145	.	+	.	ID=gene4523;Name=EC55989_16S_6;Dbxref=GeneID:7146928;gbkey=Gene;locus_tag=EC55989_16S_6
NC_011748.1	RefSeq	rRNA	4556604	4558145	.	+	.	ID=rna191;Parent=gene4523;Dbxref=GeneID:7146928;gbkey=rRNA;product=ribosomal RNA 16S
NC_011748.1	RefSeq	exon	4556604	4558145	.	+	.	ID=id370;Parent=rna191;Dbxref=GeneID:7146928;gbkey=rRNA;product=ribosomal RNA 16S
NC_011748.1	RefSeq	gene	4558231	4558306	.	+	.	ID=gene4524;Name=EC55989_tRNA46;Dbxref=GeneID:7144637;gbkey=Gene;locus_tag=EC55989_tRNA46
NC_011748.1	RefSeq	tRNA	4558231	4558306	.	+	.	ID=rna192;Dbxref=GeneID:7144637;gbkey=tRNA;product=tRNA-Glu
NC_011748.1	RefSeq	exon	4558231	4558306	.	+	.	ID=id371;Parent=rna192;Dbxref=GeneID:7144637;gbkey=tRNA;product=tRNA-Glu
NC_011748.1	RefSeq	gene	4558500	4561403	.	+	.	ID=gene4525;Name=EC55989_23S_6;Dbxref=GeneID:7145357;gbkey=Gene;locus_tag=EC55989_23S_6
NC_011748.1	RefSeq	rRNA	4558500	4561403	.	+	.	ID=rna193;Parent=gene4525;Dbxref=GeneID:7145357;gbkey=rRNA;product=ribosomal RNA 23S
NC_011748.1	RefSeq	exon	4558500	4561403	.	+	.	ID=id372;Parent=rna193;Dbxref=GeneID:7145357;gbkey=rRNA;product=ribosomal RNA 23S
NC_011748.1	RefSeq	gene	4561496	4561615	.	+	.	ID=gene4526;Name=EC55989_5S_7;Dbxref=GeneID:7144764;gbkey=Gene;locus_tag=EC55989_5S_7
NC_011748.1	RefSeq	rRNA	4561496	4561615	.	+	.	ID=rna194;Parent=gene4526;Dbxref=GeneID:7144764;gbkey=rRNA;product=ribosomal RNA 5S
NC_011748.1	RefSeq	exon	4561496	4561615	.	+	.	ID=id373;Parent=rna194;Dbxref=GeneID:7144764;gbkey=rRNA;product=ribosomal RNA 5S
NC_011748.1	RefSeq	gene	4561916	4562944	.	+	.	ID=gene4527;Name=murB;Dbxref=GeneID:7145293;gbkey=Gene;gene=murB;locus_tag=EC55989_4458
NC_011748.1	RefSeq	CDS	4561916	4562944	.	+	0	ID=cds4203;Name=YP_002405351.1;Parent=gene4527;Note=catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis;Dbxref=Genbank:YP_002405351.1,GeneID:7145293;gbkey=CDS;product=UDP-N-acetylenolpyruvoylglucosamine reductase;protein_id=YP_002405351.1;transl_table=11
NC_011748.1	RefSeq	gene	4562941	4563906	.	+	.	ID=gene4528;Name=birA;Dbxref=GeneID:7146922;gbkey=Gene;gene=birA;locus_tag=EC55989_4459
NC_011748.1	RefSeq	CDS	4562941	4563906	.	+	0	ID=cds4204;Name=YP_002405352.1;Parent=gene4528;Note=catalyzes the formation of biotinyl-5%27-AMP%2C also acts as a transcriptional repressor of the biotin operon;Dbxref=Genbank:YP_002405352.1,GeneID:7146922;gbkey=CDS;product=biotin--protein ligase;protein_id=YP_002405352.1;transl_table=11
NC_011748.1	RefSeq	gene	4563935	4564885	.	-	.	ID=gene4529;Name=coaA;Dbxref=GeneID:7145631;gbkey=Gene;gene=coaA;locus_tag=EC55989_4460
NC_011748.1	RefSeq	CDS	4563935	4564885	.	-	0	ID=cds4205;Name=YP_002405353.1;Parent=gene4529;Note=catalyzes the formation of %28R%29-4%27-phosphopantothenate in coenzyme A biosynthesis;Dbxref=Genbank:YP_002405353.1,GeneID:7145631;gbkey=CDS;product=pantothenate kinase;protein_id=YP_002405353.1;transl_table=11
NC_011748.1	RefSeq	gene	4565247	4565322	.	+	.	ID=gene4530;Name=EC55989_tRNA47;Dbxref=GeneID:7145732;gbkey=Gene;locus_tag=EC55989_tRNA47
NC_011748.1	RefSeq	tRNA	4565247	4565322	.	+	.	ID=rna195;Dbxref=GeneID:7145732;gbkey=tRNA;product=tRNA-Thr
NC_011748.1	RefSeq	exon	4565247	4565322	.	+	.	ID=id374;Parent=rna195;Dbxref=GeneID:7145732;gbkey=tRNA;product=tRNA-Thr
NC_011748.1	RefSeq	gene	4565331	4565415	.	+	.	ID=gene4531;Name=EC55989_tRNA48;Dbxref=GeneID:7145358;gbkey=Gene;locus_tag=EC55989_tRNA48
NC_011748.1	RefSeq	tRNA	4565331	4565415	.	+	.	ID=rna196;Dbxref=GeneID:7145358;gbkey=tRNA;product=tRNA-Tyr
NC_011748.1	RefSeq	exon	4565331	4565415	.	+	.	ID=id375;Parent=rna196;Dbxref=GeneID:7145358;gbkey=tRNA;product=tRNA-Tyr
NC_011748.1	RefSeq	gene	4565532	4565606	.	+	.	ID=gene4532;Name=EC55989_tRNA49;Dbxref=GeneID:7145359;gbkey=Gene;locus_tag=EC55989_tRNA49
NC_011748.1	RefSeq	tRNA	4565532	4565606	.	+	.	ID=rna197;Dbxref=GeneID:7145359;gbkey=tRNA;product=tRNA-Gly
NC_011748.1	RefSeq	exon	4565532	4565606	.	+	.	ID=id376;Parent=rna197;Dbxref=GeneID:7145359;gbkey=tRNA;product=tRNA-Gly
NC_011748.1	RefSeq	gene	4565613	4565688	.	+	.	ID=gene4533;Name=EC55989_tRNA50;Dbxref=GeneID:7145360;gbkey=Gene;locus_tag=EC55989_tRNA50
NC_011748.1	RefSeq	tRNA	4565613	4565688	.	+	.	ID=rna198;Dbxref=GeneID:7145360;gbkey=tRNA;product=tRNA-Thr
NC_011748.1	RefSeq	exon	4565613	4565688	.	+	.	ID=id377;Parent=rna198;Dbxref=GeneID:7145360;gbkey=tRNA;product=tRNA-Thr
NC_011748.1	RefSeq	gene	4565803	4566987	.	+	.	ID=gene4534;Name=tufB;Dbxref=GeneID:7145362;gbkey=Gene;gene=tufB;locus_tag=EC55989_4464
NC_011748.1	RefSeq	CDS	4565803	4566987	.	+	0	ID=cds4206;Name=YP_002405354.1;Parent=gene4534;Note=EF-Tu%3B promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis%3B when the tRNA anticodon matches the mRNA codon%2C GTP hydrolysis results%3B the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts%3B many prokaryotes have two copies of the gene encoding EF-Tu;Dbxref=Genbank:YP_002405354.1,GeneID:7145362;gbkey=CDS;product=elongation factor Tu;protein_id=YP_002405354.1;transl_table=11
NC_011748.1	RefSeq	gene	4567217	4567600	.	+	.	ID=gene4535;Name=secE;Dbxref=GeneID:7147873;gbkey=Gene;gene=secE;locus_tag=EC55989_4465
NC_011748.1	RefSeq	CDS	4567217	4567600	.	+	0	ID=cds4207;Name=YP_002405355.1;Parent=gene4535;Note=forms a complex with SecY and SecG%3B SecYEG forms a  protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane%2C a process driven by ATP and a proton-motive force;Dbxref=Genbank:YP_002405355.1,GeneID:7147873;gbkey=CDS;product=preprotein translocase subunit SecE;protein_id=YP_002405355.1;transl_table=11
NC_011748.1	RefSeq	gene	4567602	4568147	.	+	.	ID=gene4536;Name=nusG;Dbxref=GeneID:7147623;gbkey=Gene;gene=nusG;locus_tag=EC55989_4466
NC_011748.1	RefSeq	CDS	4567602	4568147	.	+	0	ID=cds4208;Name=YP_002405356.1;Parent=gene4536;Note=Modulates Rho-dependent transcription termination;Dbxref=Genbank:YP_002405356.1,GeneID:7147623;gbkey=CDS;product=transcription antitermination protein NusG;protein_id=YP_002405356.1;transl_table=11
NC_011748.1	RefSeq	gene	4568306	4568734	.	+	.	ID=gene4537;Name=rplK;Dbxref=GeneID:7147060;gbkey=Gene;gene=rplK;locus_tag=EC55989_4467
NC_011748.1	RefSeq	CDS	4568306	4568734	.	+	0	ID=cds4209;Name=YP_002405357.1;Parent=gene4537;Note=binds directly to 23S ribosomal RNA;Dbxref=Genbank:YP_002405357.1,GeneID:7147060;gbkey=CDS;product=50S ribosomal protein L11;protein_id=YP_002405357.1;transl_table=11
NC_011748.1	RefSeq	gene	4568738	4569442	.	+	.	ID=gene4538;Name=rplA;Dbxref=GeneID:7147471;gbkey=Gene;gene=rplA;locus_tag=EC55989_4468
NC_011748.1	RefSeq	CDS	4568738	4569442	.	+	0	ID=cds4210;Name=YP_002405358.1;Parent=gene4538;Note=in Escherichia coli and Methanococcus%2C this protein autoregulates expression%3B the binding site in the mRNA mimics the binding site in the 23S rRNA;Dbxref=Genbank:YP_002405358.1,GeneID:7147471;gbkey=CDS;product=50S ribosomal protein L1;protein_id=YP_002405358.1;transl_table=11
NC_011748.1	RefSeq	gene	4569855	4570352	.	+	.	ID=gene4539;Name=rplJ;Dbxref=GeneID:7147463;gbkey=Gene;gene=rplJ;locus_tag=EC55989_4469
NC_011748.1	RefSeq	CDS	4569855	4570352	.	+	0	ID=cds4211;Name=YP_002405359.1;Parent=gene4539;Note=binds the two ribosomal protein L7%2FL12 dimers and anchors them to the large ribosomal subunit;Dbxref=Genbank:YP_002405359.1,GeneID:7147463;gbkey=CDS;product=50S ribosomal protein L10;protein_id=YP_002405359.1;transl_table=11
NC_011748.1	RefSeq	gene	4570419	4570784	.	+	.	ID=gene4540;Name=rplL;Dbxref=GeneID:7147470;gbkey=Gene;gene=rplL;locus_tag=EC55989_4470
NC_011748.1	RefSeq	CDS	4570419	4570784	.	+	0	ID=cds4212;Name=YP_002405360.1;Parent=gene4540;Note=present in two forms%3B L12 is normal%2C while L7 is aminoacylated at the N-terminal serine%3B the only multicopy ribosomal protein%3B 4:1 ratio of L7%2FL12 per ribosome%3B two L12 dimers bind L10%3B critically important for translation efficiency and fidelity%3B stimulates GTPase activity of translation factors;Dbxref=Genbank:YP_002405360.1,GeneID:7147470;gbkey=CDS;product=50S ribosomal protein L7%2FL12;protein_id=YP_002405360.1;transl_table=11
NC_011748.1	RefSeq	gene	4571104	4575132	.	+	.	ID=gene4541;Name=rpoB;Dbxref=GeneID:7147472;gbkey=Gene;gene=rpoB;locus_tag=EC55989_4471
NC_011748.1	RefSeq	CDS	4571104	4575132	.	+	0	ID=cds4213;Name=YP_002405361.1;Parent=gene4541;Note=DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates%3B beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme;Dbxref=Genbank:YP_002405361.1,GeneID:7147472;gbkey=CDS;product=DNA-directed RNA polymerase subunit beta;protein_id=YP_002405361.1;transl_table=11
NC_011748.1	RefSeq	gene	4575209	4579432	.	+	.	ID=gene4542;Name=rpoC;Dbxref=GeneID:7147496;gbkey=Gene;gene=rpoC;locus_tag=EC55989_4472
NC_011748.1	RefSeq	CDS	4575209	4579432	.	+	0	ID=cds4214;Name=YP_002405362.1;Parent=gene4542;Note=DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta%27 binds to sigma factor allowing it to bind to the -10 region of the promoter;Dbxref=Genbank:YP_002405362.1,GeneID:7147496;gbkey=CDS;product=DNA-directed RNA polymerase subunit beta%27;protein_id=YP_002405362.1;transl_table=11
NC_011748.1	RefSeq	STS	4575319	4575910	.	+	.	ID=id378;Dbxref=UniSTS:471646,GeneID:7147496;gbkey=STS
NC_011748.1	RefSeq	gene	4579645	4580184	.	+	.	ID=gene4543;Name=htrC;Dbxref=GeneID:7147497;gbkey=Gene;gene=htrC;locus_tag=EC55989_4473
NC_011748.1	RefSeq	CDS	4579645	4580184	.	+	0	ID=cds4215;Name=YP_002405363.1;Parent=gene4543;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 90264341%2C 92021792%2C 2160943%3B Product type f : factor;Dbxref=Genbank:YP_002405363.1,GeneID:7147497;gbkey=CDS;product=heat shock protein;protein_id=YP_002405363.1;transl_table=11
NC_011748.1	RefSeq	gene	4580186	4580346	.	-	.	ID=gene4544;Name=sroH;Dbxref=GeneID:7146476;gbkey=Gene;gene=sroH;locus_tag=EC55989_misc_RNA_97
NC_011748.1	RefSeq	transcript	4580186	4580346	.	-	.	ID=rna199;Parent=gene4544;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 14602901%3B Product type n : RNA;Dbxref=GeneID:7146476;gbkey=misc_RNA;product=SroH
NC_011748.1	RefSeq	exon	4580186	4580346	.	-	.	ID=id379;Parent=rna199;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 14602901%3B Product type n : RNA;Dbxref=GeneID:7146476;gbkey=misc_RNA;product=SroH
NC_011748.1	RefSeq	gene	4580594	4581727	.	-	.	ID=gene4545;Name=thiH;Dbxref=GeneID:7147709;gbkey=Gene;gene=thiH;locus_tag=EC55989_4474
NC_011748.1	RefSeq	CDS	4580594	4581727	.	-	0	ID=cds4216;Name=YP_002405364.1;Parent=gene4545;Note=in Escherichia coli this enzyme functions in thiamine biosynthesis along with thiFSGI and iscS%3B with ThiFSG catalyzes the formation of thiazole phosphate from tyrosine%2C cysteine and 1-deoxy-D-xylulose-5-phosphate%3B forms a complex with ThiG%3B contains an iron-sulfur center;Dbxref=Genbank:YP_002405364.1,GeneID:7147709;gbkey=CDS;product=thiamine biosynthesis protein ThiH;protein_id=YP_002405364.1;transl_table=11
NC_011748.1	RefSeq	gene	4581724	4582494	.	-	.	ID=gene4546;Name=thiG;Dbxref=GeneID:7147787;gbkey=Gene;gene=thiG;locus_tag=EC55989_4475
NC_011748.1	RefSeq	CDS	4581724	4582494	.	-	0	ID=cds4217;Name=YP_002405365.1;Parent=gene4546;Note=functions in thiamine %28vitamin B1%29 biosynthesis%3B in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate;Dbxref=Genbank:YP_002405365.1,GeneID:7147787;gbkey=CDS;product=thiazole synthase;protein_id=YP_002405365.1;transl_table=11
NC_011748.1	RefSeq	gene	4582496	4582696	.	-	.	ID=gene4547;Name=thiS;Dbxref=GeneID:7147786;gbkey=Gene;gene=thiS;locus_tag=EC55989_4476
NC_011748.1	RefSeq	CDS	4582496	4582696	.	-	0	ID=cds4218;Name=YP_002405366.1;Parent=gene4547;Note=with ThiF%2C ThiG%2C and ThiO catalyzes the formation of the thiazole moiety of thiamine pyrophosphate;Dbxref=Genbank:YP_002405366.1,GeneID:7147786;gbkey=CDS;product=sulfur carrier protein ThiS;protein_id=YP_002405366.1;transl_table=11
NC_011748.1	RefSeq	gene	4582680	4583435	.	-	.	ID=gene4548;Name=thiF;Dbxref=GeneID:7147793;gbkey=Gene;gene=thiF;locus_tag=EC55989_4477
NC_011748.1	RefSeq	CDS	4582680	4583435	.	-	0	ID=cds4219;Name=YP_002405367.1;Parent=gene4548;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 8432721%2C 94089392%2C 98298179%2C 10082377%2C 9632726%3B Product type e : enzyme;Dbxref=Genbank:YP_002405367.1,GeneID:7147793;gbkey=CDS;product=thiamin %28thiazole moiety%29 biosynthesis protein;protein_id=YP_002405367.1;transl_table=11
NC_011748.1	RefSeq	gene	4583428	4584063	.	-	.	ID=gene4549;Name=thiE;Dbxref=GeneID:7147785;gbkey=Gene;gene=thiE;locus_tag=EC55989_4478
NC_011748.1	RefSeq	CDS	4583428	4584063	.	-	0	ID=cds4220;Name=YP_002405368.1;Parent=gene4549;Note=catalyzes the formation of thiamine monophosphate from 4-methyl-5-%28beta-hydroxyethyl%29-thiazole monophosphate and 4-amino-5-hydroxymethyl pyrimidine pyrophosphate;Dbxref=Genbank:YP_002405368.1,GeneID:7147785;gbkey=CDS;product=thiamine-phosphate pyrophosphorylase;protein_id=YP_002405368.1;transl_table=11
NC_011748.1	RefSeq	gene	4584063	4585958	.	-	.	ID=gene4550;Name=thiC;Dbxref=GeneID:7147784;gbkey=Gene;gene=thiC;locus_tag=EC55989_4479
NC_011748.1	RefSeq	CDS	4584063	4585958	.	-	0	ID=cds4221;Name=YP_002405369.1;Parent=gene4550;Note=required for the synthesis of the hydromethylpyrimidine moiety of thiamine;Dbxref=Genbank:YP_002405369.1,GeneID:7147784;gbkey=CDS;product=thiamine biosynthesis protein ThiC;protein_id=YP_002405369.1;transl_table=11
NC_011748.1	RefSeq	gene	4586039	4586139	.	-	.	ID=gene4551;Name=EC55989_misc_RNA_98;Dbxref=GeneID:7147782;gbkey=Gene;locus_tag=EC55989_misc_RNA_98
NC_011748.1	RefSeq	transcript	4586039	4586139	.	-	.	ID=rna200;Parent=gene4551;Dbxref=GeneID:7147782;gbkey=misc_RNA;product=TPP
NC_011748.1	RefSeq	exon	4586039	4586139	.	-	.	ID=id380;Parent=rna200;Dbxref=GeneID:7147782;gbkey=misc_RNA;product=TPP
NC_011748.1	RefSeq	gene	4586191	4586667	.	-	.	ID=gene4552;Name=rsd;Dbxref=GeneID:7145315;gbkey=Gene;gene=rsd;locus_tag=EC55989_4480
NC_011748.1	RefSeq	CDS	4586191	4586667	.	-	0	ID=cds4222;Name=YP_002405370.1;Parent=gene4552;Note=binds specifically to the major sigma factor sigma 70%3B active in stationary phase;Dbxref=Genbank:YP_002405370.1,GeneID:7145315;gbkey=CDS;product=anti-RNA polymerase sigma 70 factor;protein_id=YP_002405370.1;transl_table=11
NC_011748.1	RefSeq	gene	4586762	4587535	.	+	.	ID=gene4553;Name=nudC;Dbxref=GeneID:7147529;gbkey=Gene;gene=nudC;locus_tag=EC55989_4481
NC_011748.1	RefSeq	CDS	4586762	4587535	.	+	0	ID=cds4223;Name=YP_002405371.1;Parent=gene4553;Note=can catalyze hydrolysis of broad range of dinucleotide pyrophosphates but prefers reduced form of NADH%3B requires divalent metal ions such as magnesium and manganese and produces two mononucleoside 5%27-phosphates;Dbxref=Genbank:YP_002405371.1,GeneID:7147529;gbkey=CDS;product=NADH pyrophosphatase;protein_id=YP_002405371.1;transl_table=11
NC_011748.1	RefSeq	gene	4587575	4588639	.	+	.	ID=gene4554;Name=hemE;Dbxref=GeneID:7147037;gbkey=Gene;gene=hemE;locus_tag=EC55989_4482
NC_011748.1	RefSeq	CDS	4587575	4588639	.	+	0	ID=cds4224;Name=YP_002405372.1;Parent=gene4554;Note=catalyzes the formation of coproporphyrinogen from uroporphyrinogen III;Dbxref=Genbank:YP_002405372.1,GeneID:7147037;gbkey=CDS;product=uroporphyrinogen decarboxylase;protein_id=YP_002405372.1;transl_table=11
NC_011748.1	RefSeq	gene	4588649	4589320	.	+	.	ID=gene4555;Name=nfi;Dbxref=GeneID:7146411;gbkey=Gene;gene=nfi;locus_tag=EC55989_4483
NC_011748.1	RefSeq	CDS	4588649	4589320	.	+	0	ID=cds4225;Name=YP_002405373.1;Parent=gene4555;Note=Selectively cleaves double-stranded DNA at the second phosphodiester bond 3%27 to a deoxyinosine leaving behind the intact lesion on the nicked DNA%3B cleaves DNA containing urea residues%2C AP sites%2C base mismatches%2C insertion%2Fdeletion mismatches%2C flaps%2C and pseudo-Y structures;Dbxref=Genbank:YP_002405373.1,GeneID:7146411;gbkey=CDS;product=endonuclease V;protein_id=YP_002405373.1;transl_table=11
NC_011748.1	RefSeq	gene	4589363	4589953	.	+	.	ID=gene4556;Name=yjaG;Dbxref=GeneID:7146985;gbkey=Gene;gene=yjaG;locus_tag=EC55989_4484
NC_011748.1	RefSeq	CDS	4589363	4589953	.	+	0	ID=cds4226;Name=YP_002405374.1;Parent=gene4556;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405374.1,GeneID:7146985;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405374.1;transl_table=11
NC_011748.1	RefSeq	gene	4590140	4590412	.	+	.	ID=gene4557;Name=hupA;Dbxref=GeneID:7149129;gbkey=Gene;gene=hupA;locus_tag=EC55989_4485
NC_011748.1	RefSeq	CDS	4590140	4590412	.	+	0	ID=cds4227;Name=YP_002405375.1;Parent=gene4557;Note=histone-like DNA-binding protein;Dbxref=Genbank:YP_002405375.1,GeneID:7149129;gbkey=CDS;product=transcriptional regulator HU subunit alpha;protein_id=YP_002405375.1;transl_table=11
NC_011748.1	RefSeq	gene	4590425	4591120	.	+	.	ID=gene4558;Name=yjaH;Dbxref=GeneID:7146480;gbkey=Gene;gene=yjaH;locus_tag=EC55989_4486
NC_011748.1	RefSeq	CDS	4590425	4591120	.	+	0	ID=cds4228;Name=YP_002405376.1;Parent=gene4558;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405376.1,GeneID:7146480;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405376.1;transl_table=11
NC_011748.1	RefSeq	gene	4591122	4591547	.	-	.	ID=gene4559;Name=zraP;Dbxref=GeneID:7149130;gbkey=Gene;gene=zraP;locus_tag=EC55989_4487
NC_011748.1	RefSeq	CDS	4591122	4591547	.	-	0	ID=cds4229;Name=YP_002405377.1;Parent=gene4559;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 98362023%2C 9694902%3B Product type pf :  factor;Dbxref=Genbank:YP_002405377.1,GeneID:7149130;gbkey=CDS;product=zinc resistance protein;protein_id=YP_002405377.1;transl_table=11
NC_011748.1	RefSeq	gene	4591785	4593161	.	+	.	ID=gene4560;Name=zraS;Dbxref=GeneID:7149495;gbkey=Gene;gene=zraS;locus_tag=EC55989_4488
NC_011748.1	RefSeq	CDS	4591785	4593161	.	+	0	ID=cds4230;Name=YP_002405378.1;Parent=gene4560;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 21140164%2C 89327164%2C 92255260%2C 11243806%2C 2666400%3B Product type r : regulator;Dbxref=Genbank:YP_002405378.1,GeneID:7149495;gbkey=CDS;product=sensor protein ZraS;protein_id=YP_002405378.1;transl_table=11
NC_011748.1	RefSeq	gene	4593158	4594483	.	+	.	ID=gene4561;Name=zraR;Dbxref=GeneID:7149497;gbkey=Gene;gene=zraR;locus_tag=EC55989_4489
NC_011748.1	RefSeq	CDS	4593158	4594483	.	+	0	ID=cds4231;Name=YP_002405379.1;Parent=gene4561;Note=DNA-binding response regulator in two-component regulatory system with ZraS%3B response regulator%2Fsigma54 interaction protein;Dbxref=Genbank:YP_002405379.1,GeneID:7149497;gbkey=CDS;product=transcriptional regulatory protein ZraR;protein_id=YP_002405379.1;transl_table=11
NC_011748.1	RefSeq	gene	4594480	4595769	.	-	.	ID=gene4562;Name=purD;Dbxref=GeneID:7149496;gbkey=Gene;gene=purD;locus_tag=EC55989_4490
NC_011748.1	RefSeq	CDS	4594480	4595769	.	-	0	ID=cds4232;Name=YP_002405380.1;Parent=gene4562;Note=catalyzes the formation of N%281%29-%285-phospho-D-ribosyl%29glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis;Dbxref=Genbank:YP_002405380.1,GeneID:7149496;gbkey=CDS;product=phosphoribosylamine--glycine ligase;protein_id=YP_002405380.1;transl_table=11
NC_011748.1	RefSeq	gene	4595781	4597370	.	-	.	ID=gene4563;Name=purH;Dbxref=GeneID:7147295;gbkey=Gene;gene=purH;locus_tag=EC55989_4491
NC_011748.1	RefSeq	CDS	4595781	4597370	.	-	0	ID=cds4233;Name=YP_002405381.1;Parent=gene4563;Note=involved in de novo purine biosynthesis;Dbxref=Genbank:YP_002405381.1,GeneID:7147295;gbkey=CDS;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase%2FIMP cyclohydrolase;protein_id=YP_002405381.1;transl_table=11
NC_011748.1	RefSeq	gene	4597985	4599526	.	+	.	ID=gene4564;Name=EC55989_16S_7;Dbxref=GeneID:7147298;gbkey=Gene;locus_tag=EC55989_16S_7
NC_011748.1	RefSeq	rRNA	4597985	4599526	.	+	.	ID=rna201;Parent=gene4564;Dbxref=GeneID:7147298;gbkey=rRNA;product=ribosomal RNA 16S
NC_011748.1	RefSeq	exon	4597985	4599526	.	+	.	ID=id381;Parent=rna201;Dbxref=GeneID:7147298;gbkey=rRNA;product=ribosomal RNA 16S
NC_011748.1	RefSeq	gene	4599612	4599687	.	+	.	ID=gene4565;Name=EC55989_tRNA51;Dbxref=GeneID:7144638;gbkey=Gene;locus_tag=EC55989_tRNA51
NC_011748.1	RefSeq	tRNA	4599612	4599687	.	+	.	ID=rna202;Dbxref=GeneID:7144638;gbkey=tRNA;product=tRNA-Glu
NC_011748.1	RefSeq	exon	4599612	4599687	.	+	.	ID=id382;Parent=rna202;Dbxref=GeneID:7144638;gbkey=tRNA;product=tRNA-Glu
NC_011748.1	RefSeq	gene	4599881	4602784	.	+	.	ID=gene4566;Name=EC55989_23S_7;Dbxref=GeneID:7145363;gbkey=Gene;locus_tag=EC55989_23S_7
NC_011748.1	RefSeq	rRNA	4599881	4602784	.	+	.	ID=rna203;Parent=gene4566;Dbxref=GeneID:7145363;gbkey=rRNA;product=ribosomal RNA 23S
NC_011748.1	RefSeq	exon	4599881	4602784	.	+	.	ID=id383;Parent=rna203;Dbxref=GeneID:7145363;gbkey=rRNA;product=ribosomal RNA 23S
NC_011748.1	RefSeq	gene	4602877	4602996	.	+	.	ID=gene4567;Name=EC55989_5S_8;Dbxref=GeneID:7144765;gbkey=Gene;locus_tag=EC55989_5S_8
NC_011748.1	RefSeq	rRNA	4602877	4602996	.	+	.	ID=rna204;Parent=gene4567;Dbxref=GeneID:7144765;gbkey=rRNA;product=ribosomal RNA 5S
NC_011748.1	RefSeq	exon	4602877	4602996	.	+	.	ID=id384;Parent=rna204;Dbxref=GeneID:7144765;gbkey=rRNA;product=ribosomal RNA 5S
NC_011748.1	RefSeq	gene	4603112	4603555	.	-	.	ID=gene4568;Name=yjaB;Dbxref=GeneID:7145294;gbkey=Gene;gene=yjaB;locus_tag=EC55989_4497
NC_011748.1	RefSeq	CDS	4603112	4603555	.	-	0	ID=cds4234;Name=YP_002405382.1;Parent=gene4568;Note=Evidence 2b : Function of strongly homologous gene%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002405382.1,GeneID:7145294;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405382.1;transl_table=11
NC_011748.1	RefSeq	gene	4603712	4604641	.	+	.	ID=gene4569;Name=metA;Dbxref=GeneID:7149128;gbkey=Gene;gene=metA;locus_tag=EC55989_4498
NC_011748.1	RefSeq	CDS	4603712	4604641	.	+	0	ID=cds4235;Name=YP_002405383.1;Parent=gene4569;Note=catalyzes the formation of O-succinyl-L-homoserine from succinyl-CoA and L-homoserine in methionine biosynthesis;Dbxref=Genbank:YP_002405383.1,GeneID:7149128;gbkey=CDS;product=homoserine O-succinyltransferase;protein_id=YP_002405383.1;transl_table=11
NC_011748.1	RefSeq	gene	4604910	4606511	.	+	.	ID=gene4570;Name=aceB;Dbxref=GeneID:7146824;gbkey=Gene;gene=aceB;locus_tag=EC55989_4499
NC_011748.1	RefSeq	CDS	4604910	4606511	.	+	0	ID=cds4236;Name=YP_002405384.1;Parent=gene4570;Note=Catalyzes the aldol condensation of glyoxylate with acetyl-CoA to form malate as part of the second step of the glyoxylate bypass and an alternative to the tricarboxylic acid cycle;Dbxref=Genbank:YP_002405384.1,GeneID:7146824;gbkey=CDS;product=malate synthase;protein_id=YP_002405384.1;transl_table=11
NC_011748.1	RefSeq	gene	4606541	4607845	.	+	.	ID=gene4571;Name=aceA;Dbxref=GeneID:7145433;gbkey=Gene;gene=aceA;locus_tag=EC55989_4500
NC_011748.1	RefSeq	CDS	4606541	4607845	.	+	0	ID=cds4237;Name=YP_002405385.1;Parent=gene4571;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 91295197%2C 92112731%2C 92353108%2C 2836370%2C 3049537%2C 3060852%2C 3276689%2C 3290857%2C 3291954%2C 7826335%3B Product type e : enzyme;Dbxref=Genbank:YP_002405385.1,GeneID:7145433;gbkey=CDS;product=isocitrate lyase;protein_id=YP_002405385.1;transl_table=11
NC_011748.1	RefSeq	gene	4608126	4609862	.	+	.	ID=gene4572;Name=aceK;Dbxref=GeneID:7145432;gbkey=Gene;gene=aceK;locus_tag=EC55989_4501
NC_011748.1	RefSeq	CDS	4608126	4609862	.	+	0	ID=cds4238;Name=YP_002405386.1;Parent=gene4572;Note=catalyzes the phosphorylation%2Fdephosphorylation of the enzyme isocitrate dehydrogenase on a specific serine which regulates activity%3B unphosphorylated IDH is fully active when cells are grown on glucose while the enzyme becomes phosphorylated and inactive in the presence of acetate or ethanol;Dbxref=Genbank:YP_002405386.1,GeneID:7145432;gbkey=CDS;product=bifunctional isocitrate dehydrogenase kinase%2Fphosphatase protein;protein_id=YP_002405386.1;transl_table=11
NC_011748.1	RefSeq	gene	4609831	4611405	.	-	.	ID=gene4573;Name=arpA;Dbxref=GeneID:7145436;gbkey=Gene;gene=arpA;locus_tag=EC55989_4502;pseudo=true
NC_011748.1	RefSeq	region	4609831	4611405	.	-	.	ID=id385;Note=fragment of regulator of acetyl CoA synthetase %28partial%29%3BEvidence 7 : Gene remnant%3B Product type r : regulator;Dbxref=GeneID:7145436;gbkey=misc_feature
NC_011748.1	RefSeq	gene	4611722	4612546	.	-	.	ID=gene4574;Name=iclR;Dbxref=GeneID:7145551;gbkey=Gene;gene=iclR;locus_tag=EC55989_4503
NC_011748.1	RefSeq	CDS	4611722	4612546	.	-	0	ID=cds4239;Name=YP_002405387.1;Parent=gene4574;Note=regulates the glyoxylate bypass operon %28aceBAK%29%2C which encodes isocitrate lyase%2C malate synthase and isocitrate dehydrogenase kinase%2Fphosphorylase;Dbxref=Genbank:YP_002405387.1,GeneID:7145551;gbkey=CDS;product=IclR family transcriptional regulator;protein_id=YP_002405387.1;transl_table=11
NC_011748.1	RefSeq	gene	4612746	4616429	.	+	.	ID=gene4575;Name=metH;Dbxref=GeneID:7146538;gbkey=Gene;gene=metH;locus_tag=EC55989_4504
NC_011748.1	RefSeq	CDS	4612746	4616429	.	+	0	ID=cds4240;Name=YP_002405388.1;Parent=gene4575;Note=one of two methionine synthases in Escherichia coli%3B MetH catalyzes a methyl transfer reaction from methyltetrahydrofolate to homocysteine to create methionine%3B requires zinc for activity;Dbxref=Genbank:YP_002405388.1,GeneID:7146538;gbkey=CDS;product=B12-dependent methionine synthase;protein_id=YP_002405388.1;transl_table=11
NC_011748.1	RefSeq	gene	4616649	4618280	.	+	.	ID=gene4576;Name=yjbB;Dbxref=GeneID:7146830;gbkey=Gene;gene=yjbB;locus_tag=EC55989_4505
NC_011748.1	RefSeq	CDS	4616649	4618280	.	+	0	ID=cds4241;Name=YP_002405389.1;Parent=gene4576;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002405389.1,GeneID:7146830;gbkey=CDS;product=transporter;protein_id=YP_002405389.1;transl_table=11
NC_011748.1	RefSeq	gene	4618371	4619060	.	-	.	ID=gene4577;Name=pepE;Dbxref=GeneID:7149132;gbkey=Gene;gene=pepE;locus_tag=EC55989_4506
NC_011748.1	RefSeq	CDS	4618371	4619060	.	-	0	ID=cds4242;Name=YP_002405390.1;Parent=gene4577;Note=alpha-aspartyl dipeptidase%3B catalyzes the hydrolysis of dipeptides with an N-terminal aspartate residue%3B belongs to peptidase S51 family;Dbxref=Genbank:YP_002405390.1,GeneID:7149132;gbkey=CDS;product=peptidase E;protein_id=YP_002405390.1;transl_table=11
NC_011748.1	RefSeq	gene	4619272	4620144	.	+	.	ID=gene4578;Name=yjbC;Dbxref=GeneID:7147133;gbkey=Gene;gene=yjbC;locus_tag=EC55989_4507
NC_011748.1	RefSeq	CDS	4619272	4620144	.	+	0	ID=cds4243;Name=YP_002405391.1;Parent=gene4578;Note=catalyzes the synthesis of pseudouridine from U-2604 in the 23S ribosomal RNA;Dbxref=Genbank:YP_002405391.1,GeneID:7147133;gbkey=CDS;product=23S rRNA pseudouridine synthase F;protein_id=YP_002405391.1;transl_table=11
NC_011748.1	RefSeq	gene	4620145	4620417	.	-	.	ID=gene4579;Name=yjbD;Dbxref=GeneID:7149133;gbkey=Gene;gene=yjbD;locus_tag=EC55989_4508
NC_011748.1	RefSeq	CDS	4620145	4620417	.	-	0	ID=cds4244;Name=YP_002405392.1;Parent=gene4579;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405392.1,GeneID:7149133;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405392.1;transl_table=11
NC_011748.1	RefSeq	gene	4620946	4622073	.	+	.	ID=gene4580;Name=EC55989_4509;Dbxref=GeneID:7149134;gbkey=Gene;locus_tag=EC55989_4509
NC_011748.1	RefSeq	CDS	4620946	4622073	.	+	0	ID=cds4245;Name=YP_002405393.1;Parent=gene4580;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405393.1,GeneID:7149134;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405393.1;transl_table=11
NC_011748.1	RefSeq	gene	4622070	4622870	.	+	.	ID=gene4581;Name=EC55989_4510;Dbxref=GeneID:7145097;gbkey=Gene;locus_tag=EC55989_4510
NC_011748.1	RefSeq	CDS	4622070	4622870	.	+	0	ID=cds4246;Name=YP_002405394.1;Parent=gene4581;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405394.1,GeneID:7145097;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405394.1;transl_table=11
NC_011748.1	RefSeq	gene	4622906	4623838	.	-	.	ID=gene4582;Name=EC55989_4511;Dbxref=GeneID:7145098;gbkey=Gene;locus_tag=EC55989_4511
NC_011748.1	RefSeq	CDS	4622906	4623838	.	-	0	ID=cds4247;Name=YP_002405395.1;Parent=gene4582;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pf :  factor;Dbxref=Genbank:YP_002405395.1,GeneID:7145098;gbkey=CDS;product=zeta toxin%3B poison-antidote element;protein_id=YP_002405395.1;transl_table=11
NC_011748.1	RefSeq	gene	4623977	4625326	.	-	.	ID=gene4583;Name=lysC;Dbxref=GeneID:7145099;gbkey=Gene;gene=lysC;locus_tag=EC55989_4512
NC_011748.1	RefSeq	CDS	4623977	4625326	.	-	0	ID=cds4248;Name=YP_002405396.1;Parent=gene4583;Note=catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP%3B functions in amino acid biosynthesis%3B lysine sensitive;Dbxref=Genbank:YP_002405396.1,GeneID:7145099;gbkey=CDS;product=aspartate kinase;protein_id=YP_002405396.1;transl_table=11
NC_011748.1	RefSeq	gene	4625418	4625614	.	-	.	ID=gene4584;Name=EC55989_misc_RNA_99;Dbxref=GeneID:7146756;gbkey=Gene;locus_tag=EC55989_misc_RNA_99
NC_011748.1	RefSeq	transcript	4625418	4625614	.	-	.	ID=rna205;Parent=gene4584;Dbxref=GeneID:7146756;gbkey=misc_RNA;product=Lysine
NC_011748.1	RefSeq	exon	4625418	4625614	.	-	.	ID=id386;Parent=rna205;Dbxref=GeneID:7146756;gbkey=misc_RNA;product=Lysine
NC_011748.1	RefSeq	gene	4625851	4627500	.	+	.	ID=gene4585;Name=pgi;Dbxref=GeneID:7145316;gbkey=Gene;gene=pgi;locus_tag=EC55989_4513
NC_011748.1	RefSeq	CDS	4625851	4627500	.	+	0	ID=cds4249;Name=YP_002405397.1;Parent=gene4585;Note=functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways %28EMP%29 and in gluconeogenesis%3B catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate%3B member of PGI family;Dbxref=Genbank:YP_002405397.1,GeneID:7145316;gbkey=CDS;product=glucose-6-phosphate isomerase;protein_id=YP_002405397.1;transl_table=11
NC_011748.1	RefSeq	gene	4627836	4628084	.	-	.	ID=gene4586;Name=EC55989_4514;Dbxref=GeneID:7147150;gbkey=Gene;locus_tag=EC55989_4514
NC_011748.1	RefSeq	CDS	4627836	4628084	.	-	0	ID=cds4250;Name=YP_002405398.1;Parent=gene4586;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405398.1,GeneID:7147150;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405398.1;transl_table=11
NC_011748.1	RefSeq	gene	4628211	4628849	.	+	.	ID=gene4587;Name=yjbF;Dbxref=GeneID:7145100;gbkey=Gene;gene=yjbF;locus_tag=EC55989_4515
NC_011748.1	RefSeq	CDS	4628211	4628849	.	+	0	ID=cds4251;Name=YP_002405399.1;Parent=gene4587;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type lp : lipoprotein;Dbxref=Genbank:YP_002405399.1,GeneID:7145100;gbkey=CDS;product=lipoprotein;protein_id=YP_002405399.1;transl_table=11
NC_011748.1	RefSeq	gene	4628846	4629583	.	+	.	ID=gene4588;Name=yjbG;Dbxref=GeneID:7149135;gbkey=Gene;gene=yjbG;locus_tag=EC55989_4516
NC_011748.1	RefSeq	CDS	4628846	4629583	.	+	0	ID=cds4252;Name=YP_002405400.1;Parent=gene4588;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405400.1,GeneID:7149135;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405400.1;transl_table=11
NC_011748.1	RefSeq	gene	4629583	4631679	.	+	.	ID=gene4589;Name=yjbH;Dbxref=GeneID:7149136;gbkey=Gene;gene=yjbH;locus_tag=EC55989_4517
NC_011748.1	RefSeq	CDS	4629583	4631679	.	+	0	ID=cds4253;Name=YP_002405401.1;Parent=gene4589;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002405401.1,GeneID:7149136;gbkey=CDS;product=porin;protein_id=YP_002405401.1;transl_table=11
NC_011748.1	RefSeq	gene	4631683	4631844	.	+	.	ID=gene4590;Name=EC55989_4518;Dbxref=GeneID:7149137;gbkey=Gene;locus_tag=EC55989_4518
NC_011748.1	RefSeq	CDS	4631683	4631844	.	+	0	ID=cds4254;Name=YP_002405402.1;Parent=gene4590;Note=Evidence 6 : Doubtful CDS;Dbxref=Genbank:YP_002405402.1,GeneID:7149137;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405402.1;transl_table=11
NC_011748.1	RefSeq	gene	4631726	4632004	.	-	.	ID=gene4591;Name=EC55989_4519;Dbxref=GeneID:7145101;gbkey=Gene;locus_tag=EC55989_4519
NC_011748.1	RefSeq	CDS	4631726	4632004	.	-	0	ID=cds4255;Name=YP_002405403.1;Parent=gene4591;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405403.1,GeneID:7145101;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405403.1;transl_table=11
NC_011748.1	RefSeq	gene	4632274	4632684	.	+	.	ID=gene4592;Name=yjbA;Dbxref=GeneID:7145102;gbkey=Gene;gene=yjbA;locus_tag=EC55989_4521
NC_011748.1	RefSeq	CDS	4632274	4632684	.	+	0	ID=cds4256;Name=YP_002405404.1;Parent=gene4592;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 10986267%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002405404.1,GeneID:7145102;gbkey=CDS;product=phosphate-starvation-inducible protein PsiE;protein_id=YP_002405404.1;transl_table=11
NC_011748.1	RefSeq	gene	4632728	4634203	.	-	.	ID=gene4593;Name=xylE;Dbxref=GeneID:7149131;gbkey=Gene;gene=xylE;locus_tag=EC55989_4522
NC_011748.1	RefSeq	CDS	4632728	4634203	.	-	0	ID=cds4257;Name=YP_002405405.1;Parent=gene4593;Note=xylose%2Fproton symporter%3B member of the major facilitator superfamily %28MFS%29 of transporter;Dbxref=Genbank:YP_002405405.1,GeneID:7149131;gbkey=CDS;product=D-xylose transporter XylE;protein_id=YP_002405405.1;transl_table=11
NC_011748.1	RefSeq	gene	4634575	4635465	.	-	.	ID=gene4594;Name=malG;Dbxref=GeneID:7147997;gbkey=Gene;gene=malG;locus_tag=EC55989_4523
NC_011748.1	RefSeq	CDS	4634575	4635465	.	-	0	ID=cds4258;Name=YP_002405406.1;Parent=gene4594;Note=with MalKFE is involved in the transport of maltose into the cell;Dbxref=Genbank:YP_002405406.1,GeneID:7147997;gbkey=CDS;product=maltose transporter permease;protein_id=YP_002405406.1;transl_table=11
NC_011748.1	RefSeq	gene	4635480	4637024	.	-	.	ID=gene4595;Name=malF;Dbxref=GeneID:7146770;gbkey=Gene;gene=malF;locus_tag=EC55989_4524
NC_011748.1	RefSeq	CDS	4635480	4637024	.	-	0	ID=cds4259;Name=YP_002405407.1;Parent=gene4595;Note=with MalKGE is involved in maltose transport into the cell;Dbxref=Genbank:YP_002405407.1,GeneID:7146770;gbkey=CDS;product=maltose transporter membrane protein;protein_id=YP_002405407.1;transl_table=11
NC_011748.1	RefSeq	gene	4637178	4638368	.	-	.	ID=gene4596;Name=malE;Dbxref=GeneID:7146769;gbkey=Gene;gene=malE;locus_tag=EC55989_4525
NC_011748.1	RefSeq	CDS	4637178	4638368	.	-	0	ID=cds4260;Name=YP_002405408.1;Parent=gene4596;Note=functions in the MalKFGE ABC transporter complex to transport maltose into the cell by using ATP hydrolysis;Dbxref=Genbank:YP_002405408.1,GeneID:7146769;gbkey=CDS;product=maltose ABC transporter periplasmic protein;protein_id=YP_002405408.1;transl_table=11
NC_011748.1	RefSeq	gene	4638733	4639848	.	+	.	ID=gene4597;Name=malK;Dbxref=GeneID:7146768;gbkey=Gene;gene=malK;locus_tag=EC55989_4526
NC_011748.1	RefSeq	CDS	4638733	4639848	.	+	0	ID=cds4261;Name=YP_002405409.1;Parent=gene4597;Note=with malEFG is involved in import of maltose%2Fmaltodextrin;Dbxref=Genbank:YP_002405409.1,GeneID:7146768;gbkey=CDS;product=maltose%2Fmaltodextrin transporter ATP-binding protein;protein_id=YP_002405409.1;transl_table=11
NC_011748.1	RefSeq	gene	4639920	4641260	.	+	.	ID=gene4598;Name=lamB;Dbxref=GeneID:7146772;gbkey=Gene;gene=lamB;locus_tag=EC55989_4527
NC_011748.1	RefSeq	CDS	4639920	4641260	.	+	0	ID=cds4262;Name=YP_002405410.1;Parent=gene4598;Note=porin involved in the transport of maltose and maltodextrins;Dbxref=Genbank:YP_002405410.1,GeneID:7146772;gbkey=CDS;product=maltoporin;protein_id=YP_002405410.1;transl_table=11
NC_011748.1	RefSeq	gene	4641412	4642332	.	+	.	ID=gene4599;Name=malM;Dbxref=GeneID:7146679;gbkey=Gene;gene=malM;locus_tag=EC55989_4528
NC_011748.1	RefSeq	CDS	4641412	4642332	.	+	0	ID=cds4263;Name=YP_002405411.1;Parent=gene4599;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 87141162%2C 2434655%2C 6086106%3B Product type pt :  transporter;Dbxref=Genbank:YP_002405411.1,GeneID:7146679;gbkey=CDS;product=maltose regulon periplasmic protein;protein_id=YP_002405411.1;transl_table=11
NC_011748.1	RefSeq	gene	4642561	4642755	.	+	.	ID=gene4600;Name=EC55989_4529;Dbxref=GeneID:7146773;gbkey=Gene;locus_tag=EC55989_4529
NC_011748.1	RefSeq	CDS	4642561	4642755	.	+	0	ID=cds4264;Name=YP_002405412.1;Parent=gene4600;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405412.1,GeneID:7146773;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405412.1;transl_table=11
NC_011748.1	RefSeq	gene	4642813	4644141	.	+	.	ID=gene4601;Name=yjbI;Dbxref=GeneID:7145103;gbkey=Gene;gene=yjbI;locus_tag=EC55989_4530
NC_011748.1	RefSeq	CDS	4642813	4644141	.	+	0	ID=cds4265;Name=YP_002405413.1;Parent=gene4601;Note=in E. coli%2C some yjbl mutations have been reported as suppressors of dnaG mutations;Dbxref=Genbank:YP_002405413.1,GeneID:7145103;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405413.1;transl_table=11
NC_011748.1	RefSeq	gene	4644364	4644861	.	+	.	ID=gene4602;Name=ubiC;Dbxref=GeneID:7149138;gbkey=Gene;gene=ubiC;locus_tag=EC55989_4531
NC_011748.1	RefSeq	CDS	4644364	4644861	.	+	0	ID=cds4266;Name=YP_002405414.1;Parent=gene4602;Note=catalyzes the formation of 4-hydroxybenzoate from chorismate;Dbxref=Genbank:YP_002405414.1,GeneID:7149138;gbkey=CDS;product=chorismate pyruvate lyase;protein_id=YP_002405414.1;transl_table=11
NC_011748.1	RefSeq	gene	4644874	4645746	.	+	.	ID=gene4603;Name=ubiA;Dbxref=GeneID:7147889;gbkey=Gene;gene=ubiA;locus_tag=EC55989_4532
NC_011748.1	RefSeq	CDS	4644874	4645746	.	+	0	ID=cds4267;Name=YP_002405415.1;Parent=gene4603;Note=catalyzes the conversion of 4-Hydroxybenzoate into 3-octaprenyl-4-hydroxybenzoate%2C as part of the ubiquinone biosynthesis pathway;Dbxref=Genbank:YP_002405415.1,GeneID:7147889;gbkey=CDS;product=4-hydroxybenzoate octaprenyltransferase;protein_id=YP_002405415.1;transl_table=11
NC_011748.1	RefSeq	gene	4645901	4648324	.	-	.	ID=gene4604;Name=plsB;Dbxref=GeneID:7147887;gbkey=Gene;gene=plsB;locus_tag=EC55989_4533
NC_011748.1	RefSeq	CDS	4645901	4648324	.	-	0	ID=cds4268;Name=YP_002405416.1;Parent=gene4604;Note=PlsB%3B catalyzes the formation of 1-acyl-sn-glycerol 3-phosphate by transfering the acyl moiety from acyl-CoA;Dbxref=Genbank:YP_002405416.1,GeneID:7147887;gbkey=CDS;product=glycerol-3-phosphate acyltransferase;protein_id=YP_002405416.1;transl_table=11
NC_011748.1	RefSeq	gene	4648495	4648863	.	+	.	ID=gene4605;Name=dgkA;Dbxref=GeneID:7147195;gbkey=Gene;gene=dgkA;locus_tag=EC55989_4534
NC_011748.1	RefSeq	CDS	4648495	4648863	.	+	0	ID=cds4269;Name=YP_002405417.1;Parent=gene4605;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 10220339%2C 6257698%2C 86278195%2C 88111690%2C 2984194%2C 6309817%2C 8071224%3B Product type e : enzyme;Dbxref=Genbank:YP_002405417.1,GeneID:7147195;gbkey=CDS;product=diacylglycerol kinase;protein_id=YP_002405417.1;transl_table=11
NC_011748.1	RefSeq	gene	4648973	4649581	.	+	.	ID=gene4606;Name=lexA;Dbxref=GeneID:7145894;gbkey=Gene;gene=lexA;locus_tag=EC55989_4536
NC_011748.1	RefSeq	CDS	4648973	4649581	.	+	0	ID=cds4270;Name=YP_002405418.1;Parent=gene4606;Note=Represses a number of genes involved in the response to DNA damage;Dbxref=Genbank:YP_002405418.1,GeneID:7145894;gbkey=CDS;product=LexA repressor;protein_id=YP_002405418.1;transl_table=11
NC_011748.1	RefSeq	gene	4649600	4651000	.	+	.	ID=gene4607;Name=dinF;Dbxref=GeneID:7146696;gbkey=Gene;gene=dinF;locus_tag=EC55989_4537
NC_011748.1	RefSeq	CDS	4649600	4651000	.	+	0	ID=cds4271;Name=YP_002405419.1;Parent=gene4607;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 87165788%3B Product type cp : cell process;Dbxref=Genbank:YP_002405419.1,GeneID:7146696;gbkey=CDS;product=DNA-damage-inducible SOS response protein;protein_id=YP_002405419.1;transl_table=11
NC_011748.1	RefSeq	gene	4651096	4651305	.	+	.	ID=gene4608;Name=yjbJ;Dbxref=GeneID:7145916;gbkey=Gene;gene=yjbJ;locus_tag=EC55989_4538
NC_011748.1	RefSeq	CDS	4651096	4651305	.	+	0	ID=cds4272;Name=YP_002405420.1;Parent=gene4608;Note=unknown function%3B highly abundant protein in vivo%3B overexpressed under high NaCl concentrations%3B part of the sigma S regulon%3B non-essential;Dbxref=Genbank:YP_002405420.1,GeneID:7145916;gbkey=CDS;product=stress-response protein;protein_id=YP_002405420.1;transl_table=11
NC_011748.1	RefSeq	gene	4651347	4651862	.	-	.	ID=gene4609;Name=zur;Dbxref=GeneID:7149139;gbkey=Gene;gene=zur;locus_tag=EC55989_4539
NC_011748.1	RefSeq	CDS	4651347	4651862	.	-	0	ID=cds4273;Name=YP_002405421.1;Parent=gene4609;Note=Acts as a negative controlling element%2C employing Zn%282%2B%29 as a cofactor to bind the operator of the repressed genes znuACB;Dbxref=Genbank:YP_002405421.1,GeneID:7149139;gbkey=CDS;product=zinc uptake transcriptional repressor;protein_id=YP_002405421.1;transl_table=11
NC_011748.1	RefSeq	gene	4652180	4652434	.	+	.	ID=gene4610;Name=yjbL;Dbxref=GeneID:7149499;gbkey=Gene;gene=yjbL;locus_tag=EC55989_4540
NC_011748.1	RefSeq	CDS	4652180	4652434	.	+	0	ID=cds4274;Name=YP_002405422.1;Parent=gene4610;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405422.1,GeneID:7149499;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405422.1;transl_table=11
NC_011748.1	RefSeq	gene	4652425	4653171	.	+	.	ID=gene4611;Name=yjbM;Dbxref=GeneID:7149140;gbkey=Gene;gene=yjbM;locus_tag=EC55989_4541
NC_011748.1	RefSeq	CDS	4652425	4653171	.	+	0	ID=cds4275;Name=YP_002405423.1;Parent=gene4611;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405423.1,GeneID:7149140;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405423.1;transl_table=11
NC_011748.1	RefSeq	gene	4653535	4654572	.	+	.	ID=gene4612;Name=yjbN;Dbxref=GeneID:7149141;gbkey=Gene;gene=yjbN;locus_tag=EC55989_4542
NC_011748.1	RefSeq	CDS	4653535	4654572	.	+	0	ID=cds4276;Name=YP_002405424.1;Parent=gene4612;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 22095566%3B Product type e : enzyme;Dbxref=Genbank:YP_002405424.1,GeneID:7149141;gbkey=CDS;product=tRNA-dihydrouridine synthase A;protein_id=YP_002405424.1;transl_table=11
NC_011748.1	RefSeq	gene	4654496	4654948	.	+	.	ID=gene4613;Name=pspG;Dbxref=GeneID:7149142;gbkey=Gene;gene=pspG;locus_tag=EC55989_4543
NC_011748.1	RefSeq	CDS	4654496	4654948	.	+	0	ID=cds4277;Name=YP_002405425.1;Parent=gene4613;Note=coordinately regulated along with pspA%3B PspF-dependent induction in response to secretin overexpression in Yersinia;Dbxref=Genbank:YP_002405425.1,GeneID:7149142;gbkey=CDS;product=phage shock protein G;protein_id=YP_002405425.1;transl_table=11
NC_011748.1	RefSeq	gene	4655114	4656097	.	-	.	ID=gene4614;Name=qor;Dbxref=GeneID:7149143;gbkey=Gene;gene=qor;locus_tag=EC55989_4544
NC_011748.1	RefSeq	CDS	4655114	4656097	.	-	0	ID=cds4278;Name=YP_002405426.1;Parent=gene4614;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 94089392%2C 7602590%3B Product type e : enzyme;Dbxref=Genbank:YP_002405426.1,GeneID:7149143;gbkey=CDS;product=quinone oxidoreductase;protein_id=YP_002405426.1;transl_table=11
NC_011748.1	RefSeq	gene	4656180	4657595	.	+	.	ID=gene4615;Name=dnaB;Dbxref=GeneID:7147328;gbkey=Gene;gene=dnaB;locus_tag=EC55989_4545
NC_011748.1	RefSeq	CDS	4656180	4657595	.	+	0	ID=cds4279;Name=YP_002405427.1;Parent=gene4615;Note=unwinds double stranded DNA;Dbxref=Genbank:YP_002405427.1,GeneID:7147328;gbkey=CDS;product=replicative DNA helicase;protein_id=YP_002405427.1;transl_table=11
NC_011748.1	RefSeq	gene	4657648	4658727	.	+	.	ID=gene4616;Name=alr;Dbxref=GeneID:7145933;gbkey=Gene;gene=alr;locus_tag=EC55989_4546
NC_011748.1	RefSeq	CDS	4657648	4658727	.	+	0	ID=cds4280;Name=YP_002405428.1;Parent=gene4616;Note=converts L-alanine to D-alanine which is used in cell wall biosynthesis%3B binds one pyridoxal phosphate per monomer%3B forms a homodimer;Dbxref=Genbank:YP_002405428.1,GeneID:7145933;gbkey=CDS;product=alanine racemase;protein_id=YP_002405428.1;transl_table=11
NC_011748.1	RefSeq	gene	4658980	4660173	.	+	.	ID=gene4617;Name=tyrB;Dbxref=GeneID:7145488;gbkey=Gene;gene=tyrB;locus_tag=EC55989_4547
NC_011748.1	RefSeq	CDS	4658980	4660173	.	+	0	ID=cds4281;Name=YP_002405429.1;Parent=gene4617;Note=catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate;Dbxref=Genbank:YP_002405429.1,GeneID:7145488;gbkey=CDS;product=aromatic amino acid aminotransferase;protein_id=YP_002405429.1;transl_table=11
NC_011748.1	RefSeq	gene	4660395	4660937	.	-	.	ID=gene4618;Name=EC55989_4548;Dbxref=GeneID:7147882;gbkey=Gene;locus_tag=EC55989_4548
NC_011748.1	RefSeq	CDS	4660395	4660937	.	-	0	ID=cds4282;Name=YP_002405430.1;Parent=gene4618;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405430.1,GeneID:7147882;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405430.1;transl_table=11
NC_011748.1	RefSeq	gene	4661300	4662013	.	+	.	ID=gene4619;Name=aphA;Dbxref=GeneID:7145104;gbkey=Gene;gene=aphA;locus_tag=EC55989_4549
NC_011748.1	RefSeq	CDS	4661300	4662013	.	+	0	ID=cds4283;Name=YP_002405431.1;Parent=gene4619;Note=Class B%3B non-specific%3B catalyzes the dephosphorylation of organic phosphomonoesters%3B also has phosphotransferase activity;Dbxref=Genbank:YP_002405431.1,GeneID:7145104;gbkey=CDS;product=acid phosphatase%2Fphosphotransferase;protein_id=YP_002405431.1;transl_table=11
NC_011748.1	RefSeq	gene	4662124	4662540	.	+	.	ID=gene4620;Name=yjbQ;Dbxref=GeneID:7145507;gbkey=Gene;gene=yjbQ;locus_tag=EC55989_4550
NC_011748.1	RefSeq	CDS	4662124	4662540	.	+	0	ID=cds4284;Name=YP_002405432.1;Parent=gene4620;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 11972052;Dbxref=Genbank:YP_002405432.1,GeneID:7145507;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405432.1;transl_table=11
NC_011748.1	RefSeq	gene	4662544	4662900	.	+	.	ID=gene4621;Name=yjbR;Dbxref=GeneID:7149144;gbkey=Gene;gene=yjbR;locus_tag=EC55989_4551
NC_011748.1	RefSeq	CDS	4662544	4662900	.	+	0	ID=cds4285;Name=YP_002405433.1;Parent=gene4621;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405433.1,GeneID:7149144;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405433.1;transl_table=11
NC_011748.1	RefSeq	gene	4662935	4665757	.	-	.	ID=gene4622;Name=uvrA;Dbxref=GeneID:7149145;gbkey=Gene;gene=uvrA;locus_tag=EC55989_4552
NC_011748.1	RefSeq	CDS	4662935	4665757	.	-	0	ID=cds4286;Name=YP_002405434.1;Parent=gene4622;Note=The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB%2C the uvrA molecules dissociate;Dbxref=Genbank:YP_002405434.1,GeneID:7149145;gbkey=CDS;product=excinuclease ABC subunit A;protein_id=YP_002405434.1;transl_table=11
NC_011748.1	RefSeq	gene	4666011	4666547	.	+	.	ID=gene4623;Name=ssb;Dbxref=GeneID:7147933;gbkey=Gene;gene=ssb;locus_tag=EC55989_4553
NC_011748.1	RefSeq	CDS	4666011	4666547	.	+	0	ID=cds4287;Name=YP_002405435.1;Parent=gene4623;Note=binds to single stranded DNA and PriA helcase facilitate replication restart;Dbxref=Genbank:YP_002405435.1,GeneID:7147933;gbkey=CDS;product=single-stranded DNA-binding protein;protein_id=YP_002405435.1;transl_table=11
NC_011748.1	RefSeq	gene	4666646	4666927	.	-	.	ID=gene4624;Name=yjcB;Dbxref=GeneID:7147710;gbkey=Gene;gene=yjcB;locus_tag=EC55989_4554
NC_011748.1	RefSeq	CDS	4666646	4666927	.	-	0	ID=cds4288;Name=YP_002405436.1;Parent=gene4624;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002405436.1,GeneID:7147710;gbkey=CDS;product=inner membrane protein;protein_id=YP_002405436.1;transl_table=11
NC_011748.1	RefSeq	gene	4667357	4668943	.	+	.	ID=gene4625;Name=yjcC;Dbxref=GeneID:7149146;gbkey=Gene;gene=yjcC;locus_tag=EC55989_4555
NC_011748.1	RefSeq	CDS	4667357	4668943	.	+	0	ID=cds4289;Name=YP_002405437.1;Parent=gene4625;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pr :  regulator;Dbxref=Genbank:YP_002405437.1,GeneID:7149146;gbkey=CDS;product=signal transduction protein %28EAL domain containing protein%29;protein_id=YP_002405437.1;transl_table=11
NC_011748.1	RefSeq	gene	4668946	4669269	.	-	.	ID=gene4626;Name=soxS;Dbxref=GeneID:7149147;gbkey=Gene;gene=soxS;locus_tag=EC55989_4556
NC_011748.1	RefSeq	CDS	4668946	4669269	.	-	0	ID=cds4290;Name=YP_002405438.1;Parent=gene4626;Note=regulates genes involved in response to oxidative stress;Dbxref=Genbank:YP_002405438.1,GeneID:7149147;gbkey=CDS;product=DNA-binding transcriptional regulator SoxS;protein_id=YP_002405438.1;transl_table=11
NC_011748.1	RefSeq	gene	4669355	4669819	.	+	.	ID=gene4627;Name=soxR;Dbxref=GeneID:7147680;gbkey=Gene;gene=soxR;locus_tag=EC55989_4557
NC_011748.1	RefSeq	CDS	4669355	4669819	.	+	0	ID=cds4291;Name=YP_002405439.1;Parent=gene4627;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 91210176%2C 91360349%2C 94139656%2C 9564045%2C 10207625%2C 12670967%2C 1653416%2C 1708380%2C 7673113%2C 8065907%2C 8306957%2C 8631739%2C 8969171%2C 9019397%2C 9092651%2C 9204707%3B Product type r : regulator;Dbxref=Genbank:YP_002405439.1,GeneID:7147680;gbkey=CDS;product=DNA-binding transcriptional dual regulator%2C Fe-S center for redox-sensing;protein_id=YP_002405439.1;transl_table=11
NC_011748.1	RefSeq	gene	4669813	4669952	.	-	.	ID=gene4628;Name=ryjA;Dbxref=GeneID:7147679;gbkey=Gene;gene=ryjA;locus_tag=EC55989_misc_RNA_100
NC_011748.1	RefSeq	transcript	4669813	4669952	.	-	.	ID=rna206;Parent=gene4628;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 11445539%3B Product type n : RNA;Dbxref=GeneID:7147679;gbkey=misc_RNA;product=RyjA
NC_011748.1	RefSeq	exon	4669813	4669952	.	-	.	ID=id387;Parent=rna206;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 11445539%3B Product type n : RNA;Dbxref=GeneID:7147679;gbkey=misc_RNA;product=RyjA
NC_011748.1	RefSeq	gene	4670365	4671714	.	+	.	ID=gene4629;Name=yjcD;Dbxref=GeneID:7147594;gbkey=Gene;gene=yjcD;locus_tag=EC55989_4559
NC_011748.1	RefSeq	CDS	4670365	4671714	.	+	0	ID=cds4292;Name=YP_002405440.1;Parent=gene4629;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002405440.1,GeneID:7147594;gbkey=CDS;product=permease;protein_id=YP_002405440.1;transl_table=11
NC_011748.1	RefSeq	gene	4671865	4673514	.	+	.	ID=gene4630;Name=yjcE;Dbxref=GeneID:7149148;gbkey=Gene;gene=yjcE;locus_tag=EC55989_4560
NC_011748.1	RefSeq	CDS	4671865	4673514	.	+	0	ID=cds4293;Name=YP_002405441.1;Parent=gene4630;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 21557160%2C 11479290%3B Product type pt :  transporter;Dbxref=Genbank:YP_002405441.1,GeneID:7149148;gbkey=CDS;product=cation%2Fproton antiporter;protein_id=YP_002405441.1;transl_table=11
NC_011748.1	RefSeq	gene	4673668	4674960	.	-	.	ID=gene4631;Name=yjcF;Dbxref=GeneID:7149149;gbkey=Gene;gene=yjcF;locus_tag=EC55989_4561
NC_011748.1	RefSeq	CDS	4673668	4674960	.	-	0	ID=cds4294;Name=YP_002405442.1;Parent=gene4631;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405442.1,GeneID:7149149;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405442.1;transl_table=11
NC_011748.1	RefSeq	gene	4675138	4676787	.	-	.	ID=gene4632;Name=actP;Dbxref=GeneID:7149150;gbkey=Gene;gene=actP;locus_tag=EC55989_4562
NC_011748.1	RefSeq	CDS	4675138	4676787	.	-	0	ID=cds4295;Name=YP_002405443.1;Parent=gene4632;Note=member of the sodium:solute symporter family%3B cotranscribed with the acs gene which encodes acetyl coenzyme A synthase%3B mutations affect acetate uptake;Dbxref=Genbank:YP_002405443.1,GeneID:7149150;gbkey=CDS;product=acetate permease;protein_id=YP_002405443.1;transl_table=11
NC_011748.1	RefSeq	gene	4676784	4677098	.	-	.	ID=gene4633;Name=yjcH;Dbxref=GeneID:7145451;gbkey=Gene;gene=yjcH;locus_tag=EC55989_4563
NC_011748.1	RefSeq	CDS	4676784	4677098	.	-	0	ID=cds4296;Name=YP_002405444.1;Parent=gene4633;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 14563880%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002405444.1,GeneID:7145451;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405444.1;transl_table=11
NC_011748.1	RefSeq	gene	4677298	4679256	.	-	.	ID=gene4634;Name=acs;Dbxref=GeneID:7149151;gbkey=Gene;gene=acs;locus_tag=EC55989_4564
NC_011748.1	RefSeq	CDS	4677298	4679256	.	-	0	ID=cds4297;Name=YP_002405445.1;Parent=gene4634;Note=Acs%3B catalyzes the conversion of acetate and CoA to acetyl-CoA;Dbxref=Genbank:YP_002405445.1,GeneID:7149151;gbkey=CDS;product=acetyl-CoA synthetase;protein_id=YP_002405445.1;transl_table=11
NC_011748.1	RefSeq	gene	4679648	4681084	.	+	.	ID=gene4635;Name=nrfA;Dbxref=GeneID:7145450;gbkey=Gene;gene=nrfA;locus_tag=EC55989_4565
NC_011748.1	RefSeq	CDS	4679648	4681084	.	+	0	ID=cds4298;Name=YP_002405446.1;Parent=gene4635;Note=catalyzes the formate-dependent reduction of nitrite to ammonia%3B cytochrome C552;Dbxref=Genbank:YP_002405446.1,GeneID:7145450;gbkey=CDS;product=cytochrome c552;protein_id=YP_002405446.1;transl_table=11
NC_011748.1	RefSeq	gene	4681129	4681695	.	+	.	ID=gene4636;Name=nrfB;Dbxref=GeneID:7147027;gbkey=Gene;gene=nrfB;locus_tag=EC55989_4566
NC_011748.1	RefSeq	CDS	4681129	4681695	.	+	0	ID=cds4299;Name=YP_002405447.1;Parent=gene4636;Note=part of nitrite reductase complex%3B NrfB is active at high nitrate conditions%3B NrfA%2C B%2C C%2C and D are essential for the formate-dependent nitrite reduction to ammonia;Dbxref=Genbank:YP_002405447.1,GeneID:7147027;gbkey=CDS;product=cytochrome c nitrite reductase pentaheme subunit;protein_id=YP_002405447.1;transl_table=11
NC_011748.1	RefSeq	gene	4681692	4682363	.	+	.	ID=gene4637;Name=nrfC;Dbxref=GeneID:7147028;gbkey=Gene;gene=nrfC;locus_tag=EC55989_4567
NC_011748.1	RefSeq	CDS	4681692	4682363	.	+	0	ID=cds4300;Name=YP_002405448.1;Parent=gene4637;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 94335626%2C 8057835%3B Product type c : carrier;Dbxref=Genbank:YP_002405448.1,GeneID:7147028;gbkey=CDS;product=formate-dependent nitrite reductase%2C 4Fe4S subunit;protein_id=YP_002405448.1;transl_table=11
NC_011748.1	RefSeq	gene	4682360	4683316	.	+	.	ID=gene4638;Name=nrfD;Dbxref=GeneID:7147029;gbkey=Gene;gene=nrfD;locus_tag=EC55989_4568
NC_011748.1	RefSeq	CDS	4682360	4683316	.	+	0	ID=cds4301;Name=YP_002405449.1;Parent=gene4638;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 91058381%2C 94335626%2C 8057835%3B Product type e : enzyme;Dbxref=Genbank:YP_002405449.1,GeneID:7147029;gbkey=CDS;product=formate-dependent nitrite reductase%2C membrane subunit;protein_id=YP_002405449.1;transl_table=11
NC_011748.1	RefSeq	gene	4683396	4685054	.	+	.	ID=gene4639;Name=nrfE;Dbxref=GeneID:7147030;gbkey=Gene;gene=nrfE;locus_tag=EC55989_4569
NC_011748.1	RefSeq	CDS	4683396	4685054	.	+	0	ID=cds4302;Name=YP_002405450.1;Parent=gene4639;Note=with NrfF and NrfG catalyzes the insertion of heme into cytochrome c552;Dbxref=Genbank:YP_002405450.1,GeneID:7147030;gbkey=CDS;product=heme lyase subunit NrfE;protein_id=YP_002405450.1;transl_table=11
NC_011748.1	RefSeq	gene	4685047	4685430	.	+	.	ID=gene4640;Name=nrfF;Dbxref=GeneID:7147031;gbkey=Gene;gene=nrfF;locus_tag=EC55989_4570
NC_011748.1	RefSeq	CDS	4685047	4685430	.	+	0	ID=cds4303;Name=YP_002405451.1;Parent=gene4640;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 91058381%2C 94335626%2C 9593308%2C 8057835%2C 8842153%3B Product type f : factor;Dbxref=Genbank:YP_002405451.1,GeneID:7147031;gbkey=CDS;product=formate-dependent nitrite reductase complex subunit NrfF;protein_id=YP_002405451.1;transl_table=11
NC_011748.1	RefSeq	gene	4685427	4686023	.	+	.	ID=gene4641;Name=nrfG;Dbxref=GeneID:7147032;gbkey=Gene;gene=nrfG;locus_tag=EC55989_4571
NC_011748.1	RefSeq	CDS	4685427	4686023	.	+	0	ID=cds4304;Name=YP_002405452.1;Parent=gene4641;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 91058381%2C 94335626%2C 9593308%2C 8057835%2C 8842153%3B Product type f : factor;Dbxref=Genbank:YP_002405452.1,GeneID:7147032;gbkey=CDS;product=formate-dependent nitrite reductase complex subunit NrfG;protein_id=YP_002405452.1;transl_table=11
NC_011748.1	RefSeq	gene	4686365	4687678	.	+	.	ID=gene4642;Name=gltP;Dbxref=GeneID:7147033;gbkey=Gene;gene=gltP;locus_tag=EC55989_4572
NC_011748.1	RefSeq	CDS	4686365	4687678	.	+	0	ID=cds4305;Name=YP_002405453.1;Parent=gene4642;Note=carrier protein part of the Na%28%2B%29-independent%2C binding-protein-independent glutamate-aspartate transport system;Dbxref=Genbank:YP_002405453.1,GeneID:7147033;gbkey=CDS;product=glutamate%2Faspartate:proton symporter;protein_id=YP_002405453.1;transl_table=11
NC_011748.1	RefSeq	gene	4687756	4688445	.	-	.	ID=gene4643;Name=yjcO;Dbxref=GeneID:7146334;gbkey=Gene;gene=yjcO;locus_tag=EC55989_4573
NC_011748.1	RefSeq	CDS	4687756	4688445	.	-	0	ID=cds4306;Name=YP_002405454.1;Parent=gene4643;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405454.1,GeneID:7146334;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405454.1;transl_table=11
NC_011748.1	RefSeq	gene	4688539	4690686	.	-	.	ID=gene4644;Name=fdhF;Dbxref=GeneID:7149152;gbkey=Gene;gene=fdhF;locus_tag=EC55989_4574
NC_011748.1	RefSeq	CDS	4688539	4690686	.	-	0	ID=cds4307;Name=YP_002405455.1;Parent=gene4644;Note=Evidence 1c : Function experimentally demonstrated in the studied genus%3B Product type e : enzyme;Dbxref=Genbank:YP_002405455.1,GeneID:7149152;gbkey=CDS;product=formate dehydrogenase-H%2C selenopolypeptide subunit;protein_id=YP_002405455.1;transl_except=%28pos:complement%284690267..4690269%29%2Caa%3DOTHER%29;transl_table=11
NC_011748.1	RefSeq	gene	4690884	4692350	.	-	.	ID=gene4645;Name=yjcP;Dbxref=GeneID:7146068;gbkey=Gene;gene=yjcP;locus_tag=EC55989_4576
NC_011748.1	RefSeq	CDS	4690884	4692350	.	-	0	ID=cds4308;Name=YP_002405456.1;Parent=gene4645;Note=part of a multidrug efflux system involved in resistance to acriflavin%2C puromycin%2C erytjhromycin and tetraphenylarsonium chloride%3B member of the outer membrane factor %28OMF%29 family;Dbxref=Genbank:YP_002405456.1,GeneID:7146068;gbkey=CDS;product=outer membrane efflux protein MdtP;protein_id=YP_002405456.1;transl_table=11
NC_011748.1	RefSeq	gene	4692347	4694398	.	-	.	ID=gene4646;Name=yjcQ;Dbxref=GeneID:7149153;gbkey=Gene;gene=yjcQ;locus_tag=EC55989_4577
NC_011748.1	RefSeq	CDS	4692347	4694398	.	-	0	ID=cds4309;Name=YP_002405457.1;Parent=gene4646;Note=possibly part of a tripartite efflux system composed of MdtN%2C MdtO and MdtP which could be involved in resistance to puromycin%2C acriflavine and tetraphenylarsonium chloride;Dbxref=Genbank:YP_002405457.1,GeneID:7149153;gbkey=CDS;product=multidrug efflux system protein MdtO;protein_id=YP_002405457.1;transl_table=11
NC_011748.1	RefSeq	gene	4694398	4695429	.	-	.	ID=gene4647;Name=yjcR;Dbxref=GeneID:7149154;gbkey=Gene;gene=yjcR;locus_tag=EC55989_4578
NC_011748.1	RefSeq	CDS	4694398	4695429	.	-	0	ID=cds4310;Name=YP_002405458.1;Parent=gene4647;Note=with MdtO and MdtP is involved in resistance to puromycin%2C acriflavine and tetraphenylarsonium chloride;Dbxref=Genbank:YP_002405458.1,GeneID:7149154;gbkey=CDS;product=multidrug resistance protein MdtN;protein_id=YP_002405458.1;transl_table=11
NC_011748.1	RefSeq	gene	4695932	4697917	.	-	.	ID=gene4648;Name=yjcS;Dbxref=GeneID:7149155;gbkey=Gene;gene=yjcS;locus_tag=EC55989_4579
NC_011748.1	RefSeq	CDS	4695932	4697917	.	-	0	ID=cds4311;Name=YP_002405459.1;Parent=gene4648;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 1587481%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002405459.1,GeneID:7149155;gbkey=CDS;product=alkyl sulfatase;protein_id=YP_002405459.1;transl_table=11
NC_011748.1	RefSeq	gene	4698170	4698487	.	+	.	ID=gene4649;Name=EC55989_4580;Dbxref=GeneID:7149156;gbkey=Gene;locus_tag=EC55989_4580
NC_011748.1	RefSeq	CDS	4698170	4698487	.	+	0	ID=cds4312;Name=YP_002405460.1;Parent=gene4649;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002405460.1,GeneID:7149156;gbkey=CDS;product=ribose-5-phosphate isomerase B %28rpiB-like%29;protein_id=YP_002405460.1;transl_table=11
NC_011748.1	RefSeq	gene	4698556	4698885	.	+	.	ID=gene4650;Name=yjdP;Dbxref=GeneID:7145105;gbkey=Gene;gene=yjdP;locus_tag=EC55989_4582
NC_011748.1	RefSeq	CDS	4698556	4698885	.	+	0	ID=cds4313;Name=YP_002405461.1;Parent=gene4650;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405461.1,GeneID:7145105;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405461.1;transl_table=11
NC_011748.1	RefSeq	gene	4699032	4699790	.	-	.	ID=gene4651;Name=phnP;Dbxref=GeneID:7149166;gbkey=Gene;gene=phnP;locus_tag=EC55989_4583
NC_011748.1	RefSeq	CDS	4699032	4699790	.	-	0	ID=cds4314;Name=YP_002405462.1;Parent=gene4651;Note=required for the use of phosphonates and phosphite as phosphorus sources;Dbxref=Genbank:YP_002405462.1,GeneID:7149166;gbkey=CDS;product=carbon-phosphorus lyase complex accessory protein;protein_id=YP_002405462.1;transl_table=11
NC_011748.1	RefSeq	gene	4699792	4700226	.	-	.	ID=gene4652;Name=phnO;Dbxref=GeneID:7147177;gbkey=Gene;gene=phnO;locus_tag=EC55989_4584
NC_011748.1	RefSeq	CDS	4699792	4700226	.	-	0	ID=cds4315;Name=YP_002405463.1;Parent=gene4652;Note=PhnO in Salmonella enterica catalyzes the acetylation of a range of aminoalkylphosphonic acids%3B part of the biochemical pathway that enables the cell to use phosphonates as a phosphorus source%3B Escherichia coli uses a different mechanism of phosphonate catabolism where PhnO is not essential and seems to play a regulatory role;Dbxref=Genbank:YP_002405463.1,GeneID:7147177;gbkey=CDS;product=aminoalkylphosphonic acid N-acetyltransferase;protein_id=YP_002405463.1;transl_table=11
NC_011748.1	RefSeq	gene	4700213	4700770	.	-	.	ID=gene4653;Name=phnN;Dbxref=GeneID:7147176;gbkey=Gene;gene=phnN;locus_tag=EC55989_4585
NC_011748.1	RefSeq	CDS	4700213	4700770	.	-	0	ID=cds4316;Name=YP_002405464.1;Parent=gene4653;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 12700258%2C 91100346%2C 93273711%2C 93328121%2C 9650256%2C 1840580%2C 2155230%3B Product type e : enzyme;Dbxref=Genbank:YP_002405464.1,GeneID:7147176;gbkey=CDS;product=ribose 1%2C5-bisphosphokinase;protein_id=YP_002405464.1;transl_table=11
NC_011748.1	RefSeq	gene	4700770	4701906	.	-	.	ID=gene4654;Name=phnM;Dbxref=GeneID:7147175;gbkey=Gene;gene=phnM;locus_tag=EC55989_4586
NC_011748.1	RefSeq	CDS	4700770	4701906	.	-	0	ID=cds4317;Name=YP_002405465.1;Parent=gene4654;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 91100346%2C 93273711%2C 93328121%2C 9650256%2C 1840580%2C 2155230%3B Product type e : enzyme;Dbxref=Genbank:YP_002405465.1,GeneID:7147175;gbkey=CDS;product=carbon-phosphorus lyase complex subunit;protein_id=YP_002405465.1;transl_table=11
NC_011748.1	RefSeq	gene	4701903	4702583	.	-	.	ID=gene4655;Name=phnL;Dbxref=GeneID:7147174;gbkey=Gene;gene=phnL;locus_tag=EC55989_4587
NC_011748.1	RefSeq	CDS	4701903	4702583	.	-	0	ID=cds4318;Name=YP_002405466.1;Parent=gene4655;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 93122525%2C 93273711%2C 93328121%2C 9650256%2C 1840580%2C 2155230%3B Product type e : enzyme;Dbxref=Genbank:YP_002405466.1,GeneID:7147174;gbkey=CDS;product=carbon-phosphorus lyase complex subunit;protein_id=YP_002405466.1;transl_table=11
NC_011748.1	RefSeq	gene	4702760	4703518	.	-	.	ID=gene4656;Name=phnK;Dbxref=GeneID:7147173;gbkey=Gene;gene=phnK;locus_tag=EC55989_4588
NC_011748.1	RefSeq	CDS	4702760	4703518	.	-	0	ID=cds4319;Name=YP_002405467.1;Parent=gene4656;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 93122525%2C 93273711%2C 93328121%2C 9650256%2C 1840580%2C 2155230%3B Product type e : enzyme;Dbxref=Genbank:YP_002405467.1,GeneID:7147173;gbkey=CDS;product=phosphonate C-P lyase system protein PhnK;protein_id=YP_002405467.1;transl_table=11
NC_011748.1	RefSeq	gene	4703515	4704360	.	-	.	ID=gene4657;Name=phnJ;Dbxref=GeneID:7147172;gbkey=Gene;gene=phnJ;locus_tag=EC55989_4589
NC_011748.1	RefSeq	CDS	4703515	4704360	.	-	0	ID=cds4320;Name=YP_002405468.1;Parent=gene4657;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 93122525%2C 93273711%2C 93328121%2C 9650256%2C 1840580%2C 2155230%3B Product type e : enzyme;Dbxref=Genbank:YP_002405468.1,GeneID:7147172;gbkey=CDS;product=carbon-phosphorus lyase complex subunit;protein_id=YP_002405468.1;transl_table=11
NC_011748.1	RefSeq	gene	4704353	4705417	.	-	.	ID=gene4658;Name=phnI;Dbxref=GeneID:7147171;gbkey=Gene;gene=phnI;locus_tag=EC55989_4590
NC_011748.1	RefSeq	CDS	4704353	4705417	.	-	0	ID=cds4321;Name=YP_002405469.1;Parent=gene4658;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 93122525%2C 93273711%2C 93328121%2C 9650256%2C 1840580%2C 2155230%3B Product type e : enzyme;Dbxref=Genbank:YP_002405469.1,GeneID:7147171;gbkey=CDS;product=carbon-phosphorus lyase complex subunit;protein_id=YP_002405469.1;transl_table=11
NC_011748.1	RefSeq	gene	4705417	4706001	.	-	.	ID=gene4659;Name=phnH;Dbxref=GeneID:7147170;gbkey=Gene;gene=phnH;locus_tag=EC55989_4591
NC_011748.1	RefSeq	CDS	4705417	4706001	.	-	0	ID=cds4322;Name=YP_002405470.1;Parent=gene4659;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 93122525%2C 93273711%2C 93328121%2C 9650256%2C 1840580%2C 2155230%3B Product type e : enzyme;Dbxref=Genbank:YP_002405470.1,GeneID:7147170;gbkey=CDS;product=carbon-phosphorus lyase complex subunit;protein_id=YP_002405470.1;transl_table=11
NC_011748.1	RefSeq	gene	4705998	4706450	.	-	.	ID=gene4660;Name=phnG;Dbxref=GeneID:7147169;gbkey=Gene;gene=phnG;locus_tag=EC55989_4592
NC_011748.1	RefSeq	CDS	4705998	4706450	.	-	0	ID=cds4323;Name=YP_002405471.1;Parent=gene4660;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 93122525%2C 93273711%2C 93328121%2C 9650256%2C 1840580%2C 2155230%3B Product type e : enzyme;Dbxref=Genbank:YP_002405471.1,GeneID:7147169;gbkey=CDS;product=carbon-phosphorus lyase complex subunit;protein_id=YP_002405471.1;transl_table=11
NC_011748.1	RefSeq	gene	4706451	4707176	.	-	.	ID=gene4661;Name=phnF;Dbxref=GeneID:7147168;gbkey=Gene;gene=phnF;locus_tag=EC55989_4593
NC_011748.1	RefSeq	CDS	4706451	4707176	.	-	0	ID=cds4324;Name=YP_002405472.1;Parent=gene4661;Note=may be involved in phosphonate uptake and biodegradation;Dbxref=Genbank:YP_002405472.1,GeneID:7147168;gbkey=CDS;product=phosphonate metabolism transcriptional regulator PhnF;protein_id=YP_002405472.1;transl_table=11
NC_011748.1	RefSeq	gene	4707197	4708039	.	-	.	ID=gene4662;Name=phnE;Dbxref=GeneID:7147167;gbkey=Gene;gene=phnE;locus_tag=EC55989_4594
NC_011748.1	RefSeq	CDS	4707197	4708039	.	-	0	ID=cds4325;Name=YP_002405473.1;Parent=gene4662;Note=Evidence 2b : Function of strongly homologous gene%3B Product type t : transporter;Dbxref=Genbank:YP_002405473.1,GeneID:7147167;gbkey=CDS;product=phosphonates transport system%2C permease protein;protein_id=YP_002405473.1;transl_table=11
NC_011748.1	RefSeq	gene	4708082	4709098	.	-	.	ID=gene4663;Name=phnD;Dbxref=GeneID:7147166;gbkey=Gene;gene=phnD;locus_tag=EC55989_4595
NC_011748.1	RefSeq	CDS	4708082	4709098	.	-	0	ID=cds4326;Name=YP_002405474.1;Parent=gene4663;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 93122525%2C 93273711%2C 93328121%2C 9650256%2C 1840580%2C 2155230%3B Product type t : transporter;Dbxref=Genbank:YP_002405474.1,GeneID:7147166;gbkey=CDS;product=phosphonate%2Forganophosphate ester transporter subunit %3B periplasmic binding component of ABC superfamily;protein_id=YP_002405474.1;transl_table=11
NC_011748.1	RefSeq	gene	4709123	4709911	.	-	.	ID=gene4664;Name=phnC;Dbxref=GeneID:7147165;gbkey=Gene;gene=phnC;locus_tag=EC55989_4596
NC_011748.1	RefSeq	CDS	4709123	4709911	.	-	0	ID=cds4327;Name=YP_002405475.1;Parent=gene4664;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 93122525%2C 93273711%2C 93328121%2C 9650256%2C 1840580%2C 2155230%3B Product type t : transporter;Dbxref=Genbank:YP_002405475.1,GeneID:7147165;gbkey=CDS;product=phosphonate%2Forganophosphate ester transporter subunit;protein_id=YP_002405475.1;transl_table=11
NC_011748.1	RefSeq	gene	4710044	4710487	.	-	.	ID=gene4665;Name=phnB;Dbxref=GeneID:7147164;gbkey=Gene;gene=phnB;locus_tag=EC55989_4597
NC_011748.1	RefSeq	CDS	4710044	4710487	.	-	0	ID=cds4328;Name=YP_002405476.1;Parent=gene4665;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 93328121%2C 9650256%2C 2155230;Dbxref=Genbank:YP_002405476.1,GeneID:7147164;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405476.1;transl_table=11
NC_011748.1	RefSeq	gene	4710647	4711129	.	-	.	ID=gene4666;Name=EC55989_4598;Dbxref=GeneID:7147163;gbkey=Gene;locus_tag=EC55989_4598
NC_011748.1	RefSeq	CDS	4710647	4711129	.	-	0	ID=cds4329;Name=YP_002405477.1;Parent=gene4666;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 9650256%2C 2155230%3B Product type pt :  transporter;Dbxref=Genbank:YP_002405477.1,GeneID:7147163;gbkey=CDS;product=alkylphosphonate uptake protein in phosphonate metabolism;protein_id=YP_002405477.1;transl_table=11
NC_011748.1	RefSeq	gene	4711384	4713612	.	+	.	ID=gene4667;Name=yjdA;Dbxref=GeneID:7145106;gbkey=Gene;gene=yjdA;locus_tag=EC55989_4599
NC_011748.1	RefSeq	CDS	4711384	4713612	.	+	0	ID=cds4330;Name=YP_002405478.1;Parent=gene4667;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405478.1,GeneID:7145106;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405478.1;transl_table=11
NC_011748.1	RefSeq	gene	4713609	4714487	.	+	.	ID=gene4668;Name=yjcZ;Dbxref=GeneID:7149158;gbkey=Gene;gene=yjcZ;locus_tag=EC55989_4600
NC_011748.1	RefSeq	CDS	4713609	4714487	.	+	0	ID=cds4331;Name=YP_002405479.1;Parent=gene4668;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405479.1,GeneID:7149158;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405479.1;transl_table=11
NC_011748.1	RefSeq	gene	4714751	4716253	.	+	.	ID=gene4669;Name=proP;Dbxref=GeneID:7149157;gbkey=Gene;gene=proP;locus_tag=EC55989_4601
NC_011748.1	RefSeq	CDS	4714751	4716253	.	+	0	ID=cds4332;Name=YP_002405480.1;Parent=gene4669;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 10049386%2C 12525168%2C 92165733%2C 93132799%2C 9871325%2C 99376621%2C 8421314%3B Product type t : transporter;Dbxref=Genbank:YP_002405480.1,GeneID:7149157;gbkey=CDS;product=proline%2Fglycine betaine transporter;protein_id=YP_002405480.1;transl_table=11
NC_011748.1	RefSeq	gene	4716430	4717521	.	-	.	ID=gene4670;Name=basS;Dbxref=GeneID:7147255;gbkey=Gene;gene=basS;locus_tag=EC55989_4603
NC_011748.1	RefSeq	CDS	4716430	4717521	.	-	0	ID=cds4333;Name=YP_002405481.1;Parent=gene4670;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 94110256%2C 8282725%3B Product type r : regulator;Dbxref=Genbank:YP_002405481.1,GeneID:7147255;gbkey=CDS;product=sensor protein BasS%2FPmrB;protein_id=YP_002405481.1;transl_table=11
NC_011748.1	RefSeq	gene	4717531	4718199	.	-	.	ID=gene4671;Name=basR;Dbxref=GeneID:7145598;gbkey=Gene;gene=basR;locus_tag=EC55989_4604
NC_011748.1	RefSeq	CDS	4717531	4718199	.	-	0	ID=cds4334;Name=YP_002405482.1;Parent=gene4671;Note=response regulator in two-component regulatory system with BasS;Dbxref=Genbank:YP_002405482.1,GeneID:7145598;gbkey=CDS;product=DNA-binding transcriptional regulator BasR;protein_id=YP_002405482.1;transl_table=11
NC_011748.1	RefSeq	gene	4718196	4719839	.	-	.	ID=gene4672;Name=eptA;Dbxref=GeneID:7145597;gbkey=Gene;gene=eptA;locus_tag=EC55989_4605
NC_011748.1	RefSeq	CDS	4718196	4719839	.	-	0	ID=cds4335;Name=YP_002405483.1;Parent=gene4672;Note=with ZipA and an unidentified 24 kDa protein forms a complex involved in cell division;Dbxref=Genbank:YP_002405483.1,GeneID:7145597;gbkey=CDS;product=cell division protein;protein_id=YP_002405483.1;transl_table=11
NC_011748.1	RefSeq	gene	4719943	4721280	.	-	.	ID=gene4673;Name=adiC;Dbxref=GeneID:7146018;gbkey=Gene;gene=adiC;locus_tag=EC55989_4606
NC_011748.1	RefSeq	CDS	4719943	4721280	.	-	0	ID=cds4336;Name=YP_002405484.1;Parent=gene4673;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 12867448%3B Product type t : transporter;Dbxref=Genbank:YP_002405484.1,GeneID:7146018;gbkey=CDS;product=arginine:agmatin antiporter;protein_id=YP_002405484.1;transl_table=11
NC_011748.1	RefSeq	gene	4721417	4722178	.	-	.	ID=gene4674;Name=adiY;Dbxref=GeneID:7145458;gbkey=Gene;gene=adiY;locus_tag=EC55989_4607
NC_011748.1	RefSeq	CDS	4721417	4722178	.	-	0	ID=cds4337;Name=YP_002405485.1;Parent=gene4674;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : c%3B Product type r : regulator;Dbxref=Genbank:YP_002405485.1,GeneID:7145458;gbkey=CDS;product=DNA-binding transcriptional activator;protein_id=YP_002405485.1;transl_table=11
NC_011748.1	RefSeq	gene	4722503	4724773	.	-	.	ID=gene4675;Name=adiA;Dbxref=GeneID:7145459;gbkey=Gene;gene=adiA;locus_tag=EC55989_4608
NC_011748.1	RefSeq	CDS	4722503	4724773	.	-	0	ID=cds4338;Name=YP_002405486.1;Parent=gene4675;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 93186686%2C 2830169%2C 4204273%2C 8383109%3B Product type e : enzyme;Dbxref=Genbank:YP_002405486.1,GeneID:7145459;gbkey=CDS;product=biodegradative arginine decarboxylase;protein_id=YP_002405486.1;transl_table=11
NC_011748.1	RefSeq	gene	4724969	4725877	.	-	.	ID=gene4676;Name=melR;Dbxref=GeneID:7145457;gbkey=Gene;gene=melR;locus_tag=EC55989_4609
NC_011748.1	RefSeq	CDS	4724969	4725877	.	-	0	ID=cds4339;Name=YP_002405487.1;Parent=gene4676;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 90060832%2C 9108148%2C 1445207%2C 2684786%2C 2830169%3B Product type r : regulator;Dbxref=Genbank:YP_002405487.1,GeneID:7145457;gbkey=CDS;product=DNA-binding transcriptional regulator MelR;protein_id=YP_002405487.1;transl_table=11
NC_011748.1	RefSeq	gene	4726160	4727515	.	+	.	ID=gene4677;Name=melA;Dbxref=GeneID:7146816;gbkey=Gene;gene=melA;locus_tag=EC55989_4610
NC_011748.1	RefSeq	CDS	4726160	4727515	.	+	0	ID=cds4340;Name=YP_002405488.1;Parent=gene4677;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 87174747%2C 88162811%2C 90248411%2C 2831880%2C 3031590%2C 6329200%3B Product type e : enzyme;Dbxref=Genbank:YP_002405488.1,GeneID:7146816;gbkey=CDS;product=alpha-galactosidase;protein_id=YP_002405488.1;transl_table=11
NC_011748.1	RefSeq	gene	4727630	4729039	.	+	.	ID=gene4678;Name=melB;Dbxref=GeneID:7146814;gbkey=Gene;gene=melB;locus_tag=EC55989_4611
NC_011748.1	RefSeq	CDS	4727630	4729039	.	+	0	ID=cds4341;Name=YP_002405489.1;Parent=gene4678;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 14757226%2C 90241878%2C 92297631%2C 93155159%2C 1730719%2C 1872836%2C 6323466%2C 8672452%3B Product type t : transporter;Dbxref=Genbank:YP_002405489.1,GeneID:7146814;gbkey=CDS;product=melibiose:sodium symporter;protein_id=YP_002405489.1;transl_table=11
NC_011748.1	RefSeq	gene	4729178	4729807	.	-	.	ID=gene4679;Name=yjdF;Dbxref=GeneID:7146815;gbkey=Gene;gene=yjdF;locus_tag=EC55989_4612
NC_011748.1	RefSeq	CDS	4729178	4729807	.	-	0	ID=cds4342;Name=YP_002405490.1;Parent=gene4679;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002405490.1,GeneID:7146815;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405490.1;transl_table=11
NC_011748.1	RefSeq	gene	4729930	4731576	.	-	.	ID=gene4680;Name=fumB;Dbxref=GeneID:7149160;gbkey=Gene;gene=fumB;locus_tag=EC55989_4613
NC_011748.1	RefSeq	CDS	4729930	4731576	.	-	0	ID=cds4343;Name=YP_002405491.1;Parent=gene4680;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 86142617%2C 88193096%2C 89255123%2C 2656658%3B Product type e : enzyme;Dbxref=Genbank:YP_002405491.1,GeneID:7149160;gbkey=CDS;product=anaerobic class I fumarate hydratase;protein_id=YP_002405491.1;transl_table=11
NC_011748.1	RefSeq	gene	4731654	4732994	.	-	.	ID=gene4681;Name=dcuB;Dbxref=GeneID:7146231;gbkey=Gene;gene=dcuB;locus_tag=EC55989_4614
NC_011748.1	RefSeq	CDS	4731654	4732994	.	-	0	ID=cds4344;Name=YP_002405492.1;Parent=gene4681;Note=functions in anaerobic transport of C4-dicarboxylate compounds such as fumarate%3B similar to DcuA%3B DcuA and DcuB function as independent and mutually redundant C4-dicarboxylate %28aspartate%2C malate%2C fumarate and succinate%29 transporters;Dbxref=Genbank:YP_002405492.1,GeneID:7146231;gbkey=CDS;product=anaerobic C4-dicarboxylate transporter;protein_id=YP_002405492.1;transl_table=11
NC_011748.1	RefSeq	gene	4733565	4734284	.	-	.	ID=gene4682;Name=dcuR;Dbxref=GeneID:7145861;gbkey=Gene;gene=dcuR;locus_tag=EC55989_4615
NC_011748.1	RefSeq	CDS	4733565	4734284	.	-	0	ID=cds4345;Name=YP_002405493.1;Parent=gene4682;Note=response regulator in two-component regulatory system with DcuS%3B phosphorylated DcuR activates transcription of genes involved in anaerobic fumarate respiration;Dbxref=Genbank:YP_002405493.1,GeneID:7145861;gbkey=CDS;product=DNA-binding transcriptional activator DcuR;protein_id=YP_002405493.1;transl_table=11
NC_011748.1	RefSeq	gene	4734281	4735912	.	-	.	ID=gene4683;Name=dcuS;Dbxref=GeneID:7145864;gbkey=Gene;gene=dcuS;locus_tag=EC55989_4616
NC_011748.1	RefSeq	CDS	4734281	4735912	.	-	0	ID=cds4346;Name=YP_002405494.1;Parent=gene4683;Note=C4-dicarboxylate-sensing histidine kinase%3B part of two-component regulatory system with DcuR%3B regulates anaerobic fumarate respiration;Dbxref=Genbank:YP_002405494.1,GeneID:7145864;gbkey=CDS;product=sensory histidine kinase DcuS;protein_id=YP_002405494.1;transl_table=11
NC_011748.1	RefSeq	gene	4736093	4736323	.	+	.	ID=gene4684;Name=yjdI;Dbxref=GeneID:7145865;gbkey=Gene;gene=yjdI;locus_tag=EC55989_4618
NC_011748.1	RefSeq	CDS	4736093	4736323	.	+	0	ID=cds4347;Name=YP_002405495.1;Parent=gene4684;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405495.1,GeneID:7145865;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405495.1;transl_table=11
NC_011748.1	RefSeq	gene	4736335	4736607	.	+	.	ID=gene4685;Name=yjdJ;Dbxref=GeneID:7149161;gbkey=Gene;gene=yjdJ;locus_tag=EC55989_4619
NC_011748.1	RefSeq	CDS	4736335	4736607	.	+	0	ID=cds4348;Name=YP_002405496.1;Parent=gene4685;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002405496.1,GeneID:7149161;gbkey=CDS;product=acyltransferase with acyl-CoA N-acyltransferase domain;protein_id=YP_002405496.1;transl_table=11
NC_011748.1	RefSeq	gene	4736834	4737130	.	+	.	ID=gene4686;Name=yjdK;Dbxref=GeneID:7149162;gbkey=Gene;gene=yjdK;locus_tag=EC55989_4620
NC_011748.1	RefSeq	CDS	4736834	4737130	.	+	0	ID=cds4349;Name=YP_002405497.1;Parent=gene4686;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405497.1,GeneID:7149162;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405497.1;transl_table=11
NC_011748.1	RefSeq	gene	4737158	4737331	.	+	.	ID=gene4687;Name=yjdO;Dbxref=GeneID:7149163;gbkey=Gene;gene=yjdO;locus_tag=EC55989_4621
NC_011748.1	RefSeq	CDS	4737158	4737331	.	+	0	ID=cds4350;Name=YP_002405498.1;Parent=gene4687;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405498.1,GeneID:7149163;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405498.1;transl_table=11
NC_011748.1	RefSeq	gene	4737450	4738967	.	-	.	ID=gene4688;Name=lysU;Dbxref=GeneID:7149165;gbkey=Gene;gene=lysU;locus_tag=EC55989_4622
NC_011748.1	RefSeq	CDS	4737450	4738967	.	-	0	ID=cds4351;Name=YP_002405499.1;Parent=gene4688;Note=class II%3B inducible%3B catalyzes a two-step reaction%2C first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B induced by high temperature%2C anaerobiosis%2C and low pH%3B in Methanosarcina barkeri%2C LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1;Dbxref=Genbank:YP_002405499.1,GeneID:7149165;gbkey=CDS;product=lysyl-tRNA synthetase;protein_id=YP_002405499.1;transl_table=11
NC_011748.1	RefSeq	gene	4739204	4740661	.	-	.	ID=gene4689;Name=yjdL;Dbxref=GeneID:7146760;gbkey=Gene;gene=yjdL;locus_tag=EC55989_4623
NC_011748.1	RefSeq	CDS	4739204	4740661	.	-	0	ID=cds4352;Name=YP_002405500.1;Parent=gene4689;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002405500.1,GeneID:7146760;gbkey=CDS;product=transporter;protein_id=YP_002405500.1;transl_table=11
NC_011748.1	RefSeq	gene	4740720	4742867	.	-	.	ID=gene4690;Name=cadA;Dbxref=GeneID:7149164;gbkey=Gene;gene=cadA;locus_tag=EC55989_4624
NC_011748.1	RefSeq	CDS	4740720	4742867	.	-	0	ID=cds4353;Name=YP_002405501.1;Parent=gene4690;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 92105022%2C 92210511%2C 1370290%2C 1556085%2C 4204273%3B Product type e : enzyme;Dbxref=Genbank:YP_002405501.1,GeneID:7149164;gbkey=CDS;product=lysine decarboxylase 1;protein_id=YP_002405501.1;transl_table=11
NC_011748.1	RefSeq	gene	4742947	4744281	.	-	.	ID=gene4691;Name=cadB;Dbxref=GeneID:7145653;gbkey=Gene;gene=cadB;locus_tag=EC55989_4625
NC_011748.1	RefSeq	CDS	4742947	4744281	.	-	0	ID=cds4354;Name=YP_002405502.1;Parent=gene4691;Note=antiporter protein responsible for lysine import and cadaverine export%3B member of the lysine-dependent acid resistance system 4 %28AR4%29%3B inner membrane protein;Dbxref=Genbank:YP_002405502.1,GeneID:7145653;gbkey=CDS;product=lysine%2Fcadaverine antiporter;protein_id=YP_002405502.1;transl_table=11
NC_011748.1	RefSeq	gene	4744647	4746185	.	-	.	ID=gene4692;Name=cadC;Dbxref=GeneID:7145654;gbkey=Gene;gene=cadC;locus_tag=EC55989_4626
NC_011748.1	RefSeq	CDS	4744647	4746185	.	-	0	ID=cds4355;Name=YP_002405503.1;Parent=gene4692;Note=regulates the cadBA operon;Dbxref=Genbank:YP_002405503.1,GeneID:7145654;gbkey=CDS;product=DNA-binding transcriptional activator CadC;protein_id=YP_002405503.1;transl_table=11
NC_011748.1	RefSeq	gene	4746472	4746690	.	+	.	ID=gene4693;Name=EC55989_4627;Dbxref=GeneID:7145655;gbkey=Gene;locus_tag=EC55989_4627
NC_011748.1	RefSeq	CDS	4746472	4746690	.	+	0	ID=cds4356;Name=YP_002405504.1;Parent=gene4693;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405504.1,GeneID:7145655;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405504.1;transl_table=11
NC_011748.1	RefSeq	gene	4746934	4747776	.	-	.	ID=gene4694;Name=EC55989_4628;Dbxref=GeneID:7145107;gbkey=Gene;locus_tag=EC55989_4628
NC_011748.1	RefSeq	CDS	4746934	4747776	.	-	0	ID=cds4357;Name=YP_002405505.1;Parent=gene4694;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 9987116;Dbxref=Genbank:YP_002405505.1,GeneID:7145107;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405505.1;transl_table=11
NC_011748.1	RefSeq	gene	4747861	4748295	.	-	.	ID=gene4695;Name=EC55989_4629;Dbxref=GeneID:7145108;gbkey=Gene;locus_tag=EC55989_4629
NC_011748.1	RefSeq	CDS	4747861	4748295	.	-	0	ID=cds4358;Name=YP_002405506.1;Parent=gene4695;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405506.1,GeneID:7145108;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405506.1;transl_table=11
NC_011748.1	RefSeq	gene	4748078	4748566	.	-	.	ID=gene4696;Name=yeeW;Dbxref=GeneID:7145109;gbkey=Gene;gene=yeeW;locus_tag=EC55989_4630
NC_011748.1	RefSeq	CDS	4748078	4748566	.	-	0	ID=cds4359;Name=YP_002405507.1;Parent=gene4696;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405507.1,GeneID:7145109;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405507.1;transl_table=11
NC_011748.1	RefSeq	gene	4748563	4749045	.	-	.	ID=gene4697;Name=yeeV;Dbxref=GeneID:7148621;gbkey=Gene;gene=yeeV;locus_tag=EC55989_4631
NC_011748.1	RefSeq	CDS	4748563	4749045	.	-	0	ID=cds4360;Name=YP_002405508.1;Parent=gene4697;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 14594833%3B Product type f : factor;Dbxref=Genbank:YP_002405508.1,GeneID:7148621;gbkey=CDS;product=toxin of the YeeV-YeeU toxin-antitoxin system;protein_id=YP_002405508.1;transl_table=11
NC_011748.1	RefSeq	gene	4748987	4749364	.	-	.	ID=gene4698;Name=yeeU;Dbxref=GeneID:7148618;gbkey=Gene;gene=yeeU;locus_tag=EC55989_4632
NC_011748.1	RefSeq	CDS	4748987	4749364	.	-	0	ID=cds4361;Name=YP_002405509.1;Parent=gene4698;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 14594833%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002405509.1,GeneID:7148618;gbkey=CDS;product=antitoxin of the YeeV-YeeU toxin-antitoxin system%3B CP4-44 prophage;protein_id=YP_002405509.1;transl_table=11
NC_011748.1	RefSeq	gene	4749444	4749665	.	-	.	ID=gene4699;Name=yeeT;Dbxref=GeneID:7148614;gbkey=Gene;gene=yeeT;locus_tag=EC55989_4634
NC_011748.1	RefSeq	CDS	4749444	4749665	.	-	0	ID=cds4362;Name=YP_002405510.1;Parent=gene4699;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002405510.1,GeneID:7148614;gbkey=CDS;product=CP4-44 prophage;protein_id=YP_002405510.1;transl_table=11
NC_011748.1	RefSeq	gene	4749752	4750198	.	-	.	ID=gene4700;Name=yeeS;Dbxref=GeneID:7148610;gbkey=Gene;gene=yeeS;locus_tag=EC55989_4635
NC_011748.1	RefSeq	CDS	4749752	4750198	.	-	0	ID=cds4363;Name=YP_002405511.1;Parent=gene4700;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 11053371%3B Product type pf :  factor;Dbxref=Genbank:YP_002405511.1,GeneID:7148610;gbkey=CDS;product=DNA repair protein%3B CP4-44 prophage;protein_id=YP_002405511.1;transl_table=11
NC_011748.1	RefSeq	gene	4750244	4751098	.	-	.	ID=gene4701;Name=EC55989_4636;Dbxref=GeneID:7148606;gbkey=Gene;locus_tag=EC55989_4636
NC_011748.1	RefSeq	CDS	4750244	4751098	.	-	0	ID=cds4364;Name=YP_002405512.1;Parent=gene4701;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405512.1,GeneID:7148606;gbkey=CDS;product=antirestriction protein;protein_id=YP_002405512.1;transl_table=11
NC_011748.1	RefSeq	gene	4751241	4751567	.	+	.	ID=gene4702;Name=EC55989_4637;Dbxref=GeneID:7145110;gbkey=Gene;locus_tag=EC55989_4637
NC_011748.1	RefSeq	CDS	4751241	4751567	.	+	0	ID=cds4365;Name=YP_002405513.1;Parent=gene4702;Note=Evidence 2b : Function of strongly homologous gene%3B Product type e : enzyme;Dbxref=Genbank:YP_002405513.1,GeneID:7145110;gbkey=CDS;product=transposase ORF A%2C IS629;protein_id=YP_002405513.1;transl_table=11
NC_011748.1	RefSeq	gene	4751564	4752046	.	+	.	ID=gene4703;Name=EC55989_4638;Dbxref=GeneID:7145111;gbkey=Gene;locus_tag=EC55989_4638
NC_011748.1	RefSeq	CDS	4751564	4752046	.	+	0	ID=cds4366;Name=YP_002405514.1;Parent=gene4703;Note=Evidence 7 : Gene remnant%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002405514.1,GeneID:7145111;gbkey=CDS;product=transposase ORF B %28fragment%29%2C IS629;protein_id=YP_002405514.1;transl_table=11
NC_011748.1	RefSeq	gene	4752638	4754161	.	+	.	ID=gene4704;Name=EC55989_4639;Dbxref=GeneID:7145112;gbkey=Gene;locus_tag=EC55989_4639
NC_011748.1	RefSeq	CDS	4752638	4754161	.	+	0	ID=cds4367;Name=YP_002405515.1;Parent=gene4704;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002405515.1,GeneID:7145112;gbkey=CDS;product=reverse transcriptase-like protein from prophage or plasmid;protein_id=YP_002405515.1;transl_table=11
NC_011748.1	RefSeq	gene	4754165	4754251	.	+	.	ID=gene4705;Name=EC55989_misc_RNA_101;Dbxref=GeneID:7145113;gbkey=Gene;locus_tag=EC55989_misc_RNA_101
NC_011748.1	RefSeq	transcript	4754165	4754251	.	+	.	ID=rna207;Parent=gene4705;Dbxref=GeneID:7145113;gbkey=misc_RNA;product=Intron_gpII
NC_011748.1	RefSeq	exon	4754165	4754251	.	+	.	ID=id388;Parent=rna207;Dbxref=GeneID:7145113;gbkey=misc_RNA;product=Intron_gpII
NC_011748.1	RefSeq	gene	4754278	4754724	.	+	.	ID=gene4706;Name=EC55989_4640;Dbxref=GeneID:7145295;gbkey=Gene;locus_tag=EC55989_4640;pseudo=true
NC_011748.1	RefSeq	region	4754278	4754724	.	+	.	ID=id389;Note=fragment of transposase ORF B%2C IS629 %28partial%29%3BEvidence 7 : Gene remnant%3B Product type pe :  enzyme;Dbxref=GeneID:7145295;gbkey=misc_feature
NC_011748.1	RefSeq	gene	4755126	4757405	.	-	.	ID=gene4707;Name=iutA;Dbxref=GeneID:7145114;gbkey=Gene;gene=iutA;locus_tag=EC55989_4641
NC_011748.1	RefSeq	CDS	4755126	4757405	.	-	0	ID=cds4368;Name=YP_002405516.1;Parent=gene4707;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 4313071%2C 6456229%2C 7044820%2C 7042696%2C 6749806%3B Product type rc : receptor;Dbxref=Genbank:YP_002405516.1,GeneID:7145114;gbkey=CDS;product=Ferric aerobactin receptor precursor;protein_id=YP_002405516.1;transl_table=11
NC_011748.1	RefSeq	gene	4757327	4758664	.	-	.	ID=gene4708;Name=iucD;Dbxref=GeneID:7146641;gbkey=Gene;gene=iucD;locus_tag=EC55989_4642
NC_011748.1	RefSeq	CDS	4757327	4758664	.	-	0	ID=cds4369;Name=YP_002405517.1;Parent=gene4708;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 3275632%2C 10064136%3B Product type e : enzyme;Dbxref=Genbank:YP_002405517.1,GeneID:7146641;gbkey=CDS;product=L-lysine 6-monooxygenase %28Lysine N%286%29-hydroxylase%29;protein_id=YP_002405517.1;transl_table=11
NC_011748.1	RefSeq	gene	4758661	4760403	.	-	.	ID=gene4709;Name=iucC;Dbxref=GeneID:7146640;gbkey=Gene;gene=iucC;locus_tag=EC55989_4643
NC_011748.1	RefSeq	CDS	4758661	4760403	.	-	0	ID=cds4370;Name=YP_002405518.1;Parent=gene4709;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 3087960%3B Product type e : enzyme;Dbxref=Genbank:YP_002405518.1,GeneID:7146640;gbkey=CDS;product=Aerobactin siderophore biosynthesis protein;protein_id=YP_002405518.1;transl_table=11
NC_011748.1	RefSeq	gene	4760403	4761350	.	-	.	ID=gene4710;Name=iucB;Dbxref=GeneID:7146639;gbkey=Gene;gene=iucB;locus_tag=EC55989_4644
NC_011748.1	RefSeq	CDS	4760403	4761350	.	-	0	ID=cds4371;Name=YP_002405519.1;Parent=gene4710;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 3087960%3B Product type e : enzyme;Dbxref=Genbank:YP_002405519.1,GeneID:7146639;gbkey=CDS;product=aerobactin siderophore biosynthesis protein%2C N%286%29-hydroxylysine acetylase;protein_id=YP_002405519.1;transl_table=11
NC_011748.1	RefSeq	gene	4761351	4763138	.	-	.	ID=gene4711;Name=iucA;Dbxref=GeneID:7146638;gbkey=Gene;gene=iucA;locus_tag=EC55989_4645
NC_011748.1	RefSeq	CDS	4761351	4763138	.	-	0	ID=cds4372;Name=YP_002405520.1;Parent=gene4711;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 3087960%3B Product type e : enzyme;Dbxref=Genbank:YP_002405520.1,GeneID:7146638;gbkey=CDS;product=aerobactin siderophore biosynthesis protein;protein_id=YP_002405520.1;transl_table=11
NC_011748.1	RefSeq	gene	4763211	4764404	.	+	.	ID=gene4712;Name=shiF;Dbxref=GeneID:7146637;gbkey=Gene;gene=shiF;locus_tag=EC55989_4646
NC_011748.1	RefSeq	CDS	4763211	4764404	.	+	0	ID=cds4373;Name=YP_002405521.1;Parent=gene4712;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 10411725%3B Product type pt :  transporter;Dbxref=Genbank:YP_002405521.1,GeneID:7146637;gbkey=CDS;product=membrane transport protein%2C major facilitator superfamily;protein_id=YP_002405521.1;transl_table=11
NC_011748.1	RefSeq	gene	4764354	4765280	.	-	.	ID=gene4713;Name=EC55989_4647;Dbxref=GeneID:7147654;gbkey=Gene;locus_tag=EC55989_4647
NC_011748.1	RefSeq	CDS	4764354	4765280	.	-	0	ID=cds4374;Name=YP_002405522.1;Parent=gene4713;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405522.1,GeneID:7147654;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405522.1;transl_table=11
NC_011748.1	RefSeq	gene	4765587	4765784	.	+	.	ID=gene4714;Name=EC55989_4648;Dbxref=GeneID:7145115;gbkey=Gene;locus_tag=EC55989_4648
NC_011748.1	RefSeq	CDS	4765587	4765784	.	+	0	ID=cds4375;Name=YP_002405523.1;Parent=gene4714;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405523.1,GeneID:7145115;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405523.1;transl_table=11
NC_011748.1	RefSeq	gene	4765771	4765956	.	-	.	ID=gene4715;Name=EC55989_4649;Dbxref=GeneID:7145116;gbkey=Gene;locus_tag=EC55989_4649
NC_011748.1	RefSeq	CDS	4765771	4765956	.	-	0	ID=cds4376;Name=YP_002405524.1;Parent=gene4715;Note=Evidence 7 : Gene remnant%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002405524.1,GeneID:7145116;gbkey=CDS;product=Transposase ORF D %28fragment%29%2C ISEc8;protein_id=YP_002405524.1;transl_table=11
NC_011748.1	RefSeq	gene	4766020	4767153	.	+	.	ID=gene4716;Name=EC55989_4650;Dbxref=GeneID:7145117;gbkey=Gene;locus_tag=EC55989_4650
NC_011748.1	RefSeq	CDS	4766020	4767153	.	+	0	ID=cds4377;Name=YP_002405525.1;Parent=gene4716;Note=Evidence 2b : Function of strongly homologous gene%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002405525.1,GeneID:7145117;gbkey=CDS;product=transposase%2C IS110 family;protein_id=YP_002405525.1;transl_table=11
NC_011748.1	RefSeq	gene	4767202	4767648	.	-	.	ID=gene4717;Name=EC55989_4651;Dbxref=GeneID:7145118;gbkey=Gene;locus_tag=EC55989_4651;pseudo=true
NC_011748.1	RefSeq	region	4767202	4767648	.	-	.	ID=id390;Note=fragment of transposase ORF B%2C IS629 %28partial%29%3BEvidence 7 : Gene remnant%3B Product type pe :  enzyme;Dbxref=GeneID:7145118;gbkey=misc_feature
NC_011748.1	RefSeq	gene	4767675	4767761	.	-	.	ID=gene4718;Name=EC55989_misc_RNA_102;Dbxref=GeneID:7145119;gbkey=Gene;locus_tag=EC55989_misc_RNA_102
NC_011748.1	RefSeq	transcript	4767675	4767761	.	-	.	ID=rna208;Parent=gene4718;Dbxref=GeneID:7145119;gbkey=misc_RNA;product=Intron_gpII
NC_011748.1	RefSeq	exon	4767675	4767761	.	-	.	ID=id391;Parent=rna208;Dbxref=GeneID:7145119;gbkey=misc_RNA;product=Intron_gpII
NC_011748.1	RefSeq	gene	4767765	4769288	.	-	.	ID=gene4719;Name=EC55989_4652;Dbxref=GeneID:7145296;gbkey=Gene;locus_tag=EC55989_4652
NC_011748.1	RefSeq	CDS	4767765	4769288	.	-	0	ID=cds4378;Name=YP_002405526.1;Parent=gene4719;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002405526.1,GeneID:7145296;gbkey=CDS;product=reverse transcriptase-like protein from prophage or plasmid;protein_id=YP_002405526.1;transl_table=11
NC_011748.1	RefSeq	gene	4769880	4770362	.	-	.	ID=gene4720;Name=EC55989_4653;Dbxref=GeneID:7145120;gbkey=Gene;locus_tag=EC55989_4653
NC_011748.1	RefSeq	CDS	4769880	4770362	.	-	0	ID=cds4379;Name=YP_002405527.1;Parent=gene4720;Note=Evidence 7 : Gene remnant%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002405527.1,GeneID:7145120;gbkey=CDS;product=transposase ORF B %28fragment%29%2C IS629;protein_id=YP_002405527.1;transl_table=11
NC_011748.1	RefSeq	gene	4770359	4770685	.	-	.	ID=gene4721;Name=EC55989_4654;Dbxref=GeneID:7145121;gbkey=Gene;locus_tag=EC55989_4654
NC_011748.1	RefSeq	CDS	4770359	4770685	.	-	0	ID=cds4380;Name=YP_002405528.1;Parent=gene4721;Note=Evidence 2b : Function of strongly homologous gene%3B Product type e : enzyme;Dbxref=Genbank:YP_002405528.1,GeneID:7145121;gbkey=CDS;product=transposase ORF A%2C IS629;protein_id=YP_002405528.1;transl_table=11
NC_011748.1	RefSeq	gene	4770914	4771366	.	-	.	ID=gene4722;Name=EC55989_4655;Dbxref=GeneID:7145122;gbkey=Gene;locus_tag=EC55989_4655;pseudo=true
NC_011748.1	RefSeq	region	4770914	4771366	.	-	.	ID=id392;Note=fragment of   transposase ORF1%2C IS66 family %28partial%29%3BEvidence 7 : Gene remnant;Dbxref=GeneID:7145122;gbkey=misc_feature
NC_011748.1	RefSeq	gene	4771263	4772387	.	-	.	ID=gene4723;Name=EC55989_4656;Dbxref=GeneID:7145123;gbkey=Gene;locus_tag=EC55989_4656
NC_011748.1	RefSeq	CDS	4771263	4772387	.	-	0	ID=cds4381;Name=YP_002405529.1;Parent=gene4723;Dbxref=Genbank:YP_002405529.1,GeneID:7145123;gbkey=CDS;product=transposase;protein_id=YP_002405529.1;transl_table=11
NC_011748.1	RefSeq	gene	4772454	4772615	.	-	.	ID=gene4724;Name=EC55989_4657;Dbxref=GeneID:7145124;gbkey=Gene;locus_tag=EC55989_4657
NC_011748.1	RefSeq	CDS	4772454	4772615	.	-	0	ID=cds4382;Name=YP_002405530.1;Parent=gene4724;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405530.1,GeneID:7145124;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405530.1;transl_table=11
NC_011748.1	RefSeq	gene	4772587	4773117	.	+	.	ID=gene4725;Name=EC55989_4658;Dbxref=GeneID:7145125;gbkey=Gene;locus_tag=EC55989_4658;pseudo=true
NC_011748.1	RefSeq	region	4772587	4773117	.	+	.	ID=id393;Note=fragment of   transposase %28partial%29%3BEvidence 7 : Gene remnant;Dbxref=GeneID:7145125;gbkey=misc_feature
NC_011748.1	RefSeq	gene	4773180	4773398	.	+	.	ID=gene4726;Name=EC55989_4659;Dbxref=GeneID:7145126;gbkey=Gene;locus_tag=EC55989_4659
NC_011748.1	RefSeq	CDS	4773180	4773398	.	+	0	ID=cds4383;Name=YP_002405531.1;Parent=gene4726;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405531.1,GeneID:7145126;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405531.1;transl_table=11
NC_011748.1	RefSeq	gene	4773549	4777667	.	-	.	ID=gene4727;Name=EC55989_4660;Dbxref=GeneID:7145127;gbkey=Gene;locus_tag=EC55989_4660
NC_011748.1	RefSeq	CDS	4773549	4777667	.	-	0	ID=cds4384;Name=YP_002405532.1;Parent=gene4727;Note=Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism%3B Product type e : enzyme;Dbxref=Genbank:YP_002405532.1,GeneID:7145127;gbkey=CDS;product=Serine protease pic precursor %28ShMu%29;protein_id=YP_002405532.1;transl_table=11
NC_011748.1	RefSeq	gene	4777832	4778218	.	-	.	ID=gene4728;Name=EC55989_4661;Dbxref=GeneID:7145128;gbkey=Gene;locus_tag=EC55989_4661;pseudo=true
NC_011748.1	RefSeq	region	4777832	4778218	.	-	.	ID=id394;Note=fragment of transposase ORF B%2C IS629 %28partial%29%3BEvidence 7 : Gene remnant%3B Product type pe :  enzyme;Dbxref=GeneID:7145128;gbkey=misc_feature
NC_011748.1	RefSeq	gene	4778305	4778391	.	-	.	ID=gene4729;Name=EC55989_misc_RNA_103;Dbxref=GeneID:7145129;gbkey=Gene;locus_tag=EC55989_misc_RNA_103
NC_011748.1	RefSeq	transcript	4778305	4778391	.	-	.	ID=rna209;Parent=gene4729;Dbxref=GeneID:7145129;gbkey=misc_RNA;product=Intron_gpII
NC_011748.1	RefSeq	exon	4778305	4778391	.	-	.	ID=id395;Parent=rna209;Dbxref=GeneID:7145129;gbkey=misc_RNA;product=Intron_gpII
NC_011748.1	RefSeq	gene	4778395	4779918	.	-	.	ID=gene4730;Name=EC55989_4662;Dbxref=GeneID:7145297;gbkey=Gene;locus_tag=EC55989_4662
NC_011748.1	RefSeq	CDS	4778395	4779918	.	-	0	ID=cds4385;Name=YP_002405533.1;Parent=gene4730;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002405533.1,GeneID:7145297;gbkey=CDS;product=reverse transcriptase-like protein from prophage or plasmid;protein_id=YP_002405533.1;transl_table=11
NC_011748.1	RefSeq	gene	4780510	4780992	.	-	.	ID=gene4731;Name=EC55989_4663;Dbxref=GeneID:7145130;gbkey=Gene;locus_tag=EC55989_4663
NC_011748.1	RefSeq	CDS	4780510	4780992	.	-	0	ID=cds4386;Name=YP_002405534.1;Parent=gene4731;Note=Evidence 7 : Gene remnant%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002405534.1,GeneID:7145130;gbkey=CDS;product=transposase ORF B %28fragment%29%2C IS629;protein_id=YP_002405534.1;transl_table=11
NC_011748.1	RefSeq	gene	4780989	4781315	.	-	.	ID=gene4732;Name=EC55989_4664;Dbxref=GeneID:7145131;gbkey=Gene;locus_tag=EC55989_4664
NC_011748.1	RefSeq	CDS	4780989	4781315	.	-	0	ID=cds4387;Name=YP_002405535.1;Parent=gene4732;Note=Evidence 2b : Function of strongly homologous gene%3B Product type e : enzyme;Dbxref=Genbank:YP_002405535.1,GeneID:7145131;gbkey=CDS;product=transposase ORF A%2C IS629;protein_id=YP_002405535.1;transl_table=11
NC_011748.1	RefSeq	gene	4781960	4782124	.	-	.	ID=gene4733;Name=EC55989_4665;Dbxref=GeneID:7145132;gbkey=Gene;locus_tag=EC55989_4665
NC_011748.1	RefSeq	CDS	4781960	4782124	.	-	0	ID=cds4388;Name=YP_002405536.1;Parent=gene4733;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405536.1,GeneID:7145132;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405536.1;transl_table=11
NC_011748.1	RefSeq	gene	4782657	4783037	.	-	.	ID=gene4734;Name=EC55989_4666;Dbxref=GeneID:7145133;gbkey=Gene;locus_tag=EC55989_4666;pseudo=true
NC_011748.1	RefSeq	region	4782657	4783037	.	-	.	ID=id396;Note=fragment of  homolog to shiA %28SHI-2 pathogenicity island of Shigella flexneri%29 %28part 3%29%3BEvidence 7 : Gene remnant%3B Product type pe :  enzyme;Dbxref=GeneID:7145133;gbkey=misc_feature
NC_011748.1	RefSeq	gene	4783165	4783332	.	-	.	ID=gene4735;Name=EC55989_4667;Dbxref=GeneID:7145134;gbkey=Gene;locus_tag=EC55989_4667;pseudo=true
NC_011748.1	RefSeq	region	4783165	4783332	.	-	.	ID=id397;Note=fragment of  homolog to shiA %28SHI-2 pathogenicity island of Shigella flexneri%29 %28part 2%29%3BEvidence 7 : Gene remnant%3B Product type pe :  enzyme;Dbxref=GeneID:7145134;gbkey=misc_feature
NC_011748.1	RefSeq	gene	4783512	4783655	.	-	.	ID=gene4736;Name=EC55989_4668;Dbxref=GeneID:7145135;gbkey=Gene;locus_tag=EC55989_4668;pseudo=true
NC_011748.1	RefSeq	region	4783512	4783655	.	-	.	ID=id398;Note=fragment of  homolog to shiA %28SHI-2 pathogenicity island of Shigella flexneri%29 %28part 1%29%3BEvidence 7 : Gene remnant%3B Product type pe :  enzyme;Dbxref=GeneID:7145135;gbkey=misc_feature
NC_011748.1	RefSeq	gene	4784434	4786524	.	+	.	ID=gene4737;Name=EC55989_4669;Dbxref=GeneID:7145136;gbkey=Gene;locus_tag=EC55989_4669
NC_011748.1	RefSeq	CDS	4784434	4786524	.	+	0	ID=cds4389;Name=YP_002405537.1;Parent=gene4737;Note=IrgA-homologue adhesin %28Iha%29%3B TonB-dependent%3B acts as a specific receptor of enterobactin%3B fur-regulated%3B urovirulence factor;Dbxref=Genbank:YP_002405537.1,GeneID:7145136;gbkey=CDS;product=bifunctional enterobactin receptor%2Fadhesin protein;protein_id=YP_002405537.1;transl_table=11
NC_011748.1	RefSeq	STS	4785241	4785448	.	+	.	ID=id399;Dbxref=UniSTS:234998,GeneID:7145136;gbkey=STS
NC_011748.1	RefSeq	gene	4786758	4786982	.	+	.	ID=gene4738;Name=EC55989_4670;Dbxref=GeneID:7145137;gbkey=Gene;locus_tag=EC55989_4670
NC_011748.1	RefSeq	CDS	4786758	4786982	.	+	0	ID=cds4390;Name=YP_002405538.1;Parent=gene4738;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405538.1,GeneID:7145137;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405538.1;transl_table=11
NC_011748.1	RefSeq	gene	4787129	4788742	.	-	.	ID=gene4739;Name=EC55989_4671;Dbxref=GeneID:7145138;gbkey=Gene;locus_tag=EC55989_4671
NC_011748.1	RefSeq	CDS	4787129	4788742	.	-	0	ID=cds4391;Name=YP_002405539.1;Parent=gene4739;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405539.1,GeneID:7145138;gbkey=CDS;product=transposase ORF1%2C IS66 family;protein_id=YP_002405539.1;transl_table=11
NC_011748.1	RefSeq	gene	4788948	4789274	.	+	.	ID=gene4740;Name=EC55989_4672;Dbxref=GeneID:7145139;gbkey=Gene;locus_tag=EC55989_4672
NC_011748.1	RefSeq	CDS	4788948	4789274	.	+	0	ID=cds4392;Name=YP_002405540.1;Parent=gene4740;Note=Evidence 2b : Function of strongly homologous gene%3B Product type e : enzyme;Dbxref=Genbank:YP_002405540.1,GeneID:7145139;gbkey=CDS;product=transposase ORF A%2C IS629;protein_id=YP_002405540.1;transl_table=11
NC_011748.1	RefSeq	gene	4789271	4789753	.	+	.	ID=gene4741;Name=EC55989_4673;Dbxref=GeneID:7145140;gbkey=Gene;locus_tag=EC55989_4673
NC_011748.1	RefSeq	CDS	4789271	4789753	.	+	0	ID=cds4393;Name=YP_002405541.1;Parent=gene4741;Note=Evidence 7 : Gene remnant%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002405541.1,GeneID:7145140;gbkey=CDS;product=transposase ORF B %28fragment%29%2C IS629;protein_id=YP_002405541.1;transl_table=11
NC_011748.1	RefSeq	gene	4790345	4791868	.	+	.	ID=gene4742;Name=EC55989_4674;Dbxref=GeneID:7145141;gbkey=Gene;locus_tag=EC55989_4674
NC_011748.1	RefSeq	CDS	4790345	4791868	.	+	0	ID=cds4394;Name=YP_002405542.1;Parent=gene4742;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002405542.1,GeneID:7145141;gbkey=CDS;product=reverse transcriptase-like protein from prophage or plasmid;protein_id=YP_002405542.1;transl_table=11
NC_011748.1	RefSeq	gene	4791872	4791958	.	+	.	ID=gene4743;Name=EC55989_misc_RNA_104;Dbxref=GeneID:7145142;gbkey=Gene;locus_tag=EC55989_misc_RNA_104
NC_011748.1	RefSeq	transcript	4791872	4791958	.	+	.	ID=rna210;Parent=gene4743;Dbxref=GeneID:7145142;gbkey=misc_RNA;product=Intron_gpII
NC_011748.1	RefSeq	exon	4791872	4791958	.	+	.	ID=id400;Parent=rna210;Dbxref=GeneID:7145142;gbkey=misc_RNA;product=Intron_gpII
NC_011748.1	RefSeq	gene	4791985	4792431	.	+	.	ID=gene4744;Name=EC55989_4675;Dbxref=GeneID:7145298;gbkey=Gene;locus_tag=EC55989_4675;pseudo=true
NC_011748.1	RefSeq	region	4791985	4792431	.	+	.	ID=id401;Note=fragment of transposase ORF B%2C IS629 %28partial%29%3BEvidence 7 : Gene remnant%3B Product type pe :  enzyme;Dbxref=GeneID:7145298;gbkey=misc_feature
NC_011748.1	RefSeq	gene	4792434	4792706	.	-	.	ID=gene4745;Name=EC55989_4676;Dbxref=GeneID:7145143;gbkey=Gene;locus_tag=EC55989_4676;pseudo=true
NC_011748.1	RefSeq	region	4792434	4792706	.	-	.	ID=id402;Note=fragment of   transposase ORF2%2C IS66 family %28partial%29%3BEvidence 7 : Gene remnant;Dbxref=GeneID:7145143;gbkey=misc_feature
NC_011748.1	RefSeq	gene	4792703	4793128	.	-	.	ID=gene4746;Name=EC55989_4677;Dbxref=GeneID:7145144;gbkey=Gene;locus_tag=EC55989_4677
NC_011748.1	RefSeq	CDS	4792703	4793128	.	-	0	ID=cds4395;Name=YP_002405543.1;Parent=gene4746;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002405543.1,GeneID:7145144;gbkey=CDS;product=transposase OrfA from plasmid origin;protein_id=YP_002405543.1;transl_table=11
NC_011748.1	RefSeq	gene	4793356	4794270	.	-	.	ID=gene4747;Name=EC55989_4678;Dbxref=GeneID:7145145;gbkey=Gene;locus_tag=EC55989_4678
NC_011748.1	RefSeq	CDS	4793356	4794270	.	-	0	ID=cds4396;Name=YP_002405544.1;Parent=gene4747;Note=Evidence 7 : Gene remnant;Dbxref=Genbank:YP_002405544.1,GeneID:7145145;gbkey=CDS;product=transposase %28fragment%29;protein_id=YP_002405544.1;transl_table=11
NC_011748.1	RefSeq	gene	4794357	4795040	.	-	.	ID=gene4748;Name=EC55989_4679;Dbxref=GeneID:7145146;gbkey=Gene;locus_tag=EC55989_4679
NC_011748.1	RefSeq	CDS	4794357	4795040	.	-	0	ID=cds4397;Name=YP_002405545.1;Parent=gene4748;Note=Evidence 7 : Gene remnant;Dbxref=Genbank:YP_002405545.1,GeneID:7145146;gbkey=CDS;product=transposase %28fragment%29;protein_id=YP_002405545.1;transl_table=11
NC_011748.1	RefSeq	gene	4794929	4795336	.	+	.	ID=gene4749;Name=EC55989_4680;Dbxref=GeneID:7145147;gbkey=Gene;locus_tag=EC55989_4680;pseudo=true
NC_011748.1	RefSeq	region	4794929	4795336	.	+	.	ID=id403;Note=fragment of  transposase ORF 1%2C IS66 family %28partial%29%3BEvidence 7 : Gene remnant%3B Product type pe :  enzyme;Dbxref=GeneID:7145147;gbkey=misc_feature
NC_011748.1	RefSeq	gene	4795739	4796488	.	-	.	ID=gene4750;Name=EC55989_4681;Dbxref=GeneID:7145148;gbkey=Gene;locus_tag=EC55989_4681
NC_011748.1	RefSeq	CDS	4795739	4796488	.	-	0	ID=cds4398;Name=YP_002405546.1;Parent=gene4750;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405546.1,GeneID:7145148;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405546.1;transl_table=11
NC_011748.1	RefSeq	gene	4796367	4800224	.	-	.	ID=gene4751;Name=EC55989_4682;Dbxref=GeneID:7145149;gbkey=Gene;locus_tag=EC55989_4682
NC_011748.1	RefSeq	CDS	4796367	4800224	.	-	0	ID=cds4399;Name=YP_002405547.1;Parent=gene4751;Note=Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism%3B Product type e : enzyme;Dbxref=Genbank:YP_002405547.1,GeneID:7145149;gbkey=CDS;product=Serine protease pet precursor %28Plasmid-encoded toxin pet%29;protein_id=YP_002405547.1;transl_table=11
NC_011748.1	RefSeq	gene	4800585	4801385	.	-	.	ID=gene4752;Name=traF;Dbxref=GeneID:7145150;gbkey=Gene;gene=traF;locus_tag=EC55989_4683;pseudo=true
NC_011748.1	RefSeq	region	4800585	4801385	.	-	.	ID=id404;Note=fragment of   plasmid transfer protein %28partial%29%3BEvidence 7 : Gene remnant;Dbxref=GeneID:7145150;gbkey=misc_feature
NC_011748.1	RefSeq	gene	4801712	4801993	.	+	.	ID=gene4753;Name=EC55989_4684;Dbxref=GeneID:7147834;gbkey=Gene;locus_tag=EC55989_4684;pseudo=true
NC_011748.1	RefSeq	region	4801712	4801993	.	+	.	ID=id405;Note=fragment of   transposase %28partial%29%3BEvidence 7 : Gene remnant;Dbxref=GeneID:7147834;gbkey=misc_feature
NC_011748.1	RefSeq	gene	4801990	4802355	.	-	.	ID=gene4754;Name=EC55989_4685;Dbxref=GeneID:7145151;gbkey=Gene;locus_tag=EC55989_4685;pseudo=true
NC_011748.1	RefSeq	region	4801990	4802355	.	-	.	ID=id406;Note=fragment of transposase%2C IS110 family %28partial%29%3BEvidence 7 : Gene remnant%3B Product type pe :  enzyme;Dbxref=GeneID:7145151;gbkey=misc_feature
NC_011748.1	RefSeq	gene	4802695	4806210	.	-	.	ID=gene4755;Name=EC55989_4686;Dbxref=GeneID:7145152;gbkey=Gene;locus_tag=EC55989_4686
NC_011748.1	RefSeq	CDS	4802695	4806210	.	-	0	ID=cds4400;Name=YP_002405548.1;Parent=gene4755;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002405548.1,GeneID:7145152;gbkey=CDS;product=superfamily I DNA helicase;protein_id=YP_002405548.1;transl_table=11
NC_011748.1	RefSeq	gene	4806299	4806562	.	+	.	ID=gene4756;Name=EC55989_4687;Dbxref=GeneID:7145153;gbkey=Gene;locus_tag=EC55989_4687
NC_011748.1	RefSeq	CDS	4806299	4806562	.	+	0	ID=cds4401;Name=YP_002405549.1;Parent=gene4756;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405549.1,GeneID:7145153;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405549.1;transl_table=11
NC_011748.1	RefSeq	gene	4806663	4807925	.	-	.	ID=gene4757;Name=int;Dbxref=GeneID:7145154;gbkey=Gene;gene=int;locus_tag=EC55989_4688
NC_011748.1	RefSeq	CDS	4806663	4807925	.	-	0	ID=cds4402;Name=YP_002405550.1;Parent=gene4757;Note=Evidence 2b : Function of strongly homologous gene%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002405550.1,GeneID:7145154;gbkey=CDS;product=Prophage integrase;protein_id=YP_002405550.1;transl_table=11
NC_011748.1	RefSeq	gene	4807989	4808237	.	-	.	ID=gene4758;Name=EC55989_4689;Dbxref=GeneID:7146606;gbkey=Gene;locus_tag=EC55989_4689
NC_011748.1	RefSeq	CDS	4807989	4808237	.	-	0	ID=cds4403;Name=YP_002405551.1;Parent=gene4758;Note=Evidence 5 : No homology to any previously reported sequences;Dbxref=Genbank:YP_002405551.1,GeneID:7146606;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405551.1;transl_table=11
NC_011748.1	RefSeq	gene	4808123	4808198	.	-	.	ID=gene4759;Name=EC55989_tRNA59;Dbxref=GeneID:7145155;gbkey=Gene;locus_tag=EC55989_tRNA59
NC_011748.1	RefSeq	tRNA	4808123	4808198	.	-	.	ID=rna211;Dbxref=GeneID:7145155;gbkey=tRNA;product=tRNA-Phe
NC_011748.1	RefSeq	exon	4808123	4808198	.	-	.	ID=id407;Parent=rna211;Dbxref=GeneID:7145155;gbkey=tRNA;product=tRNA-Phe
NC_011748.1	RefSeq	gene	4808305	4808880	.	-	.	ID=gene4760;Name=yjdC;Dbxref=GeneID:7145371;gbkey=Gene;gene=yjdC;locus_tag=EC55989_4690
NC_011748.1	RefSeq	CDS	4808305	4808880	.	-	0	ID=cds4404;Name=YP_002405552.1;Parent=gene4760;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 1370290%3B Product type pr :  regulator;Dbxref=Genbank:YP_002405552.1,GeneID:7145371;gbkey=CDS;product=transcriptional regulator;protein_id=YP_002405552.1;transl_table=11
NC_011748.1	RefSeq	gene	4808917	4810614	.	-	.	ID=gene4761;Name=dipZ;Dbxref=GeneID:7149159;gbkey=Gene;gene=dipZ;locus_tag=EC55989_4691
NC_011748.1	RefSeq	CDS	4808917	4810614	.	-	0	ID=cds4405;Name=YP_002405553.1;Parent=gene4761;Note=two electrons are transferred from cytoplasmic NADPH to thioredoxin and then to the inner membrane protein DsbD which keeps the disulfide isomerase DsbC in a reduced state in the oxidizing periplasm%3B DsbC in turns rearranges incorrectly made disulfide bonds in the periplasm;Dbxref=Genbank:YP_002405553.1,GeneID:7149159;gbkey=CDS;product=thiol:disulfide interchange protein;protein_id=YP_002405553.1;transl_table=11
NC_011748.1	RefSeq	gene	4810590	4810928	.	-	.	ID=gene4762;Name=cutA;Dbxref=GeneID:7145920;gbkey=Gene;gene=cutA;locus_tag=EC55989_4692
NC_011748.1	RefSeq	CDS	4810590	4810928	.	-	0	ID=cds4406;Name=YP_002405554.1;Parent=gene4762;Note=copper binding protein required for copper tolerance%3B involved in resistance toward heavy metals;Dbxref=Genbank:YP_002405554.1,GeneID:7145920;gbkey=CDS;product=divalent-cation tolerance protein CutA;protein_id=YP_002405554.1;transl_table=11
NC_011748.1	RefSeq	gene	4811044	4812345	.	-	.	ID=gene4763;Name=dcuA;Dbxref=GeneID:7145798;gbkey=Gene;gene=dcuA;locus_tag=EC55989_4693
NC_011748.1	RefSeq	CDS	4811044	4812345	.	-	0	ID=cds4407;Name=YP_002405555.1;Parent=gene4763;Note=functions in anaerobic transport of C4-dicarboxylate compounds such as fumarate%3B similar to dcuB;Dbxref=Genbank:YP_002405555.1,GeneID:7145798;gbkey=CDS;product=anaerobic C4-dicarboxylate transporter;protein_id=YP_002405555.1;transl_table=11
NC_011748.1	RefSeq	STS	4812059	4812362	.	+	.	ID=id408;Dbxref=UniSTS:523633;gbkey=STS
NC_011748.1	RefSeq	gene	4812463	4813899	.	-	.	ID=gene4764;Name=aspA;Dbxref=GeneID:7145860;gbkey=Gene;gene=aspA;locus_tag=EC55989_4694
NC_011748.1	RefSeq	CDS	4812463	4813899	.	-	0	ID=cds4408;Name=YP_002405556.1;Parent=gene4764;Note=catalyzes the formation of fumarate from aspartate;Dbxref=Genbank:YP_002405556.1,GeneID:7145860;gbkey=CDS;product=aspartate ammonia-lyase;protein_id=YP_002405556.1;transl_table=11
NC_011748.1	RefSeq	gene	4814236	4814712	.	+	.	ID=gene4765;Name=fxsA;Dbxref=GeneID:7145571;gbkey=Gene;gene=fxsA;locus_tag=EC55989_4695
NC_011748.1	RefSeq	CDS	4814236	4814712	.	+	0	ID=cds4409;Name=YP_002405557.1;Parent=gene4765;Note=F exclusion of bacteriophage T7%3B overproduction of this protein in Escherichia coli inhibits the F plasmid-mediated exclusion of bacteriophage T7%3B interacts with the F plasmid-encoded PifA protein%3B inner membrane protein;Dbxref=Genbank:YP_002405557.1,GeneID:7145571;gbkey=CDS;product=FxsA protein;protein_id=YP_002405557.1;transl_table=11
NC_011748.1	RefSeq	gene	4814728	4815984	.	-	.	ID=gene4766;Name=yjeH;Dbxref=GeneID:7146235;gbkey=Gene;gene=yjeH;locus_tag=EC55989_4696
NC_011748.1	RefSeq	CDS	4814728	4815984	.	-	0	ID=cds4410;Name=YP_002405558.1;Parent=gene4766;Note=uncharacterized member of the APC superfamily of amino acid transporters%3B unknown function;Dbxref=Genbank:YP_002405558.1,GeneID:7146235;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405558.1;transl_table=11
NC_011748.1	RefSeq	gene	4816260	4816553	.	+	.	ID=gene4767;Name=groES;Dbxref=GeneID:7149169;gbkey=Gene;gene=groES;locus_tag=EC55989_4697
NC_011748.1	RefSeq	CDS	4816260	4816553	.	+	0	ID=cds4411;Name=YP_002405559.1;Parent=gene4767;Note=10 kDa chaperonin%3B Cpn10%3B GroES%3B forms homoheptameric ring%3B binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it%3B folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES%3B release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring;Dbxref=Genbank:YP_002405559.1,GeneID:7149169;gbkey=CDS;product=co-chaperonin GroES;protein_id=YP_002405559.1;transl_table=11
NC_011748.1	RefSeq	gene	4816597	4818243	.	+	.	ID=gene4768;Name=groEL;Dbxref=GeneID:7146368;gbkey=Gene;gene=groEL;locus_tag=EC55989_4698
NC_011748.1	RefSeq	CDS	4816597	4818243	.	+	0	ID=cds4412;Name=YP_002405560.1;Parent=gene4768;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds%3B many bacteria have multiple copies of the groEL gene which are active under different environmental conditions%3B the B.japonicum protein in this cluster is expressed constitutively%3B in Rhodobacter%2C Corynebacterium and Rhizobium this protein is essential for growth;Dbxref=Genbank:YP_002405560.1,GeneID:7146368;gbkey=CDS;product=molecular chaperone GroEL;protein_id=YP_002405560.1;transl_table=11
NC_011748.1	RefSeq	gene	4818381	4818734	.	+	.	ID=gene4769;Name=yjeI;Dbxref=GeneID:7146367;gbkey=Gene;gene=yjeI;locus_tag=EC55989_4699
NC_011748.1	RefSeq	CDS	4818381	4818734	.	+	0	ID=cds4413;Name=YP_002405561.1;Parent=gene4769;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405561.1,GeneID:7146367;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405561.1;transl_table=11
NC_011748.1	RefSeq	gene	4818937	4819806	.	-	.	ID=gene4770;Name=yjeJ;Dbxref=GeneID:7149170;gbkey=Gene;gene=yjeJ;locus_tag=EC55989_4700
NC_011748.1	RefSeq	CDS	4818937	4819806	.	-	0	ID=cds4414;Name=YP_002405562.1;Parent=gene4770;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405562.1,GeneID:7149170;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405562.1;transl_table=11
NC_011748.1	RefSeq	gene	4820196	4821224	.	-	.	ID=gene4771;Name=yjeK;Dbxref=GeneID:7149171;gbkey=Gene;gene=yjeK;locus_tag=EC55989_4701
NC_011748.1	RefSeq	CDS	4820196	4821224	.	-	0	ID=cds4415;Name=YP_002405563.1;Parent=gene4771;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 2019591%2C 10629195%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002405563.1,GeneID:7149171;gbkey=CDS;product=lysine aminomutase;protein_id=YP_002405563.1;transl_table=11
NC_011748.1	RefSeq	gene	4821266	4821832	.	+	.	ID=gene4772;Name=efp;Dbxref=GeneID:7149172;gbkey=Gene;gene=efp;locus_tag=EC55989_4702
NC_011748.1	RefSeq	CDS	4821266	4821832	.	+	0	ID=cds4416;Name=YP_002405564.1;Parent=gene4772;Note=Involved in peptide bond synthesis%3B alters the affinity of the ribosome for aminoacyl-tRNA;Dbxref=Genbank:YP_002405564.1,GeneID:7149172;gbkey=CDS;product=elongation factor P;protein_id=YP_002405564.1;transl_table=11
NC_011748.1	RefSeq	gene	4821884	4822009	.	+	.	ID=gene4773;Name=ecnA;Dbxref=GeneID:7145981;gbkey=Gene;gene=ecnA;locus_tag=EC55989_4703
NC_011748.1	RefSeq	CDS	4821884	4822009	.	+	0	ID=cds4417;Name=YP_002405565.1;Parent=gene4773;Note=acts as and antidote to the bacteriolytic entericidin B in the EcnAB toxin-antitoxin complex;Dbxref=Genbank:YP_002405565.1,GeneID:7145981;gbkey=CDS;product=entericidin A;protein_id=YP_002405565.1;transl_table=11
NC_011748.1	RefSeq	gene	4822120	4822266	.	+	.	ID=gene4774;Name=ecnB;Dbxref=GeneID:7145971;gbkey=Gene;gene=ecnB;locus_tag=EC55989_4704
NC_011748.1	RefSeq	CDS	4822120	4822266	.	+	0	ID=cds4418;Name=YP_002405566.1;Parent=gene4774;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 98344100%2C 9677290%3B Product type lp : lipoprotein;Dbxref=Genbank:YP_002405566.1,GeneID:7145971;gbkey=CDS;product=entericidin B membrane lipoprotein;protein_id=YP_002405566.1;transl_table=11
NC_011748.1	RefSeq	gene	4822441	4822758	.	+	.	ID=gene4775;Name=sugE;Dbxref=GeneID:7145972;gbkey=Gene;gene=sugE;locus_tag=EC55989_4705
NC_011748.1	RefSeq	CDS	4822441	4822758	.	+	0	ID=cds4419;Name=YP_002405567.1;Parent=gene4775;Note=member of the SMR family of proton-dependent drug efflux transporters%3B quaternary ammonium compound efflux pump%3B confers resistance to cetylpyridinium%2C cetyldimethylethyl ammonium and cetrimide cations;Dbxref=Genbank:YP_002405567.1,GeneID:7145972;gbkey=CDS;product=quaternary ammonium compound-resistance protein SugE;protein_id=YP_002405567.1;transl_table=11
NC_011748.1	RefSeq	gene	4822755	4823288	.	-	.	ID=gene4776;Name=blc;Dbxref=GeneID:7147737;gbkey=Gene;gene=blc;locus_tag=EC55989_4706
NC_011748.1	RefSeq	CDS	4822755	4823288	.	-	0	ID=cds4420;Name=YP_002405568.1;Parent=gene4776;Note=lipocalin%3B globomycin-sensitive outer membrane lipoprotein;Dbxref=Genbank:YP_002405568.1,GeneID:7147737;gbkey=CDS;product=outer membrane lipoprotein Blc;protein_id=YP_002405568.1;transl_table=11
NC_011748.1	RefSeq	gene	4823377	4824510	.	-	.	ID=gene4777;Name=ampC;Dbxref=GeneID:7145633;gbkey=Gene;gene=ampC;locus_tag=EC55989_4707
NC_011748.1	RefSeq	CDS	4823377	4824510	.	-	0	ID=cds4421;Name=YP_002405569.1;Parent=gene4777;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 92212899%2C 97464439%2C 99421326%2C 10595535%2C 6795623%2C 7041115%2C 9819201%3B Product type e : enzyme;Dbxref=Genbank:YP_002405569.1,GeneID:7145633;gbkey=CDS;product=beta-lactamase;protein_id=YP_002405569.1;transl_table=11
NC_011748.1	RefSeq	gene	4824573	4824932	.	-	.	ID=gene4778;Name=frdD;Dbxref=GeneID:7145494;gbkey=Gene;gene=frdD;locus_tag=EC55989_4708
NC_011748.1	RefSeq	CDS	4824573	4824932	.	-	0	ID=cds4422;Name=YP_002405570.1;Parent=gene4778;Note=in conjunction with FrdC acts to anchor the catalytic components of the fumarate reductase to the cytoplasmic membrane;Dbxref=Genbank:YP_002405570.1,GeneID:7145494;gbkey=CDS;product=fumarate reductase subunit D;protein_id=YP_002405570.1;transl_table=11
NC_011748.1	RefSeq	gene	4824943	4825338	.	-	.	ID=gene4779;Name=frdC;Dbxref=GeneID:7146182;gbkey=Gene;gene=frdC;locus_tag=EC55989_4709
NC_011748.1	RefSeq	CDS	4824943	4825338	.	-	0	ID=cds4423;Name=YP_002405571.1;Parent=gene4779;Note=part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration%3B FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit%2C respectively%3B FrdCD are the membrane components which interact with quinone and are involved in electron transfer%3B the catalytic subunits are similar to succinate dehydrogenase SdhAB;Dbxref=Genbank:YP_002405571.1,GeneID:7146182;gbkey=CDS;product=fumarate reductase subunit C;protein_id=YP_002405571.1;transl_table=11
NC_011748.1	RefSeq	gene	4825349	4826083	.	-	.	ID=gene4780;Name=frdB;Dbxref=GeneID:7146181;gbkey=Gene;gene=frdB;locus_tag=EC55989_4710
NC_011748.1	RefSeq	CDS	4825349	4826083	.	-	0	ID=cds4424;Name=YP_002405572.1;Parent=gene4780;Note=part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration%3B FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit%2C respectively%3B FrdCD are the membrane components which interact with quinone and are involved in electron transfer%3B the catalytic subunits are similar to succinate dehydrogenase SdhAB;Dbxref=Genbank:YP_002405572.1,GeneID:7146181;gbkey=CDS;product=fumarate reductase iron-sulfur subunit;protein_id=YP_002405572.1;transl_table=11
NC_011748.1	RefSeq	gene	4826076	4827884	.	-	.	ID=gene4781;Name=frdA;Dbxref=GeneID:7146180;gbkey=Gene;gene=frdA;locus_tag=EC55989_4711
NC_011748.1	RefSeq	CDS	4826076	4827884	.	-	0	ID=cds4425;Name=YP_002405573.1;Parent=gene4781;Note=part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration%3B FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit%2C respectively%3B FrdCD are the membrane components which interact with quinone and are involved in electron transfer%3B the catalytic subunits are similar to succinate dehydrogenase SdhAB;Dbxref=Genbank:YP_002405573.1,GeneID:7146180;gbkey=CDS;product=fumarate reductase flavoprotein subunit;protein_id=YP_002405573.1;transl_table=11
NC_011748.1	RefSeq	gene	4828209	4829186	.	+	.	ID=gene4782;Name=poxA;Dbxref=GeneID:7146179;gbkey=Gene;gene=poxA;locus_tag=EC55989_4712
NC_011748.1	RefSeq	CDS	4828209	4829186	.	+	0	ID=cds4426;Name=YP_002405574.1;Parent=gene4782;Note=lysine--tRNA ligase beta chain%3B poxA%3B class II aminoacyl tRNA synthetase%3B catalyzes a two-step reaction%3B first charging a lysine molecule by linking the carboxyl group to the alpha-phosphate of ATP%3B second by transfer of the aminoacyl-adenylate to its tRNA;Dbxref=Genbank:YP_002405574.1,GeneID:7146179;gbkey=CDS;product=lysyl-tRNA synthetase;protein_id=YP_002405574.1;transl_table=11
NC_011748.1	RefSeq	gene	4829405	4830907	.	+	.	ID=gene4783;Name=yjeM;Dbxref=GeneID:7147218;gbkey=Gene;gene=yjeM;locus_tag=EC55989_4713
NC_011748.1	RefSeq	CDS	4829405	4830907	.	+	0	ID=cds4427;Name=YP_002405575.1;Parent=gene4783;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002405575.1,GeneID:7147218;gbkey=CDS;product=transporter;protein_id=YP_002405575.1;transl_table=11
NC_011748.1	RefSeq	gene	4830959	4831273	.	+	.	ID=gene4784;Name=yjeN;Dbxref=GeneID:7149173;gbkey=Gene;gene=yjeN;locus_tag=EC55989_4714
NC_011748.1	RefSeq	CDS	4830959	4831273	.	+	0	ID=cds4428;Name=YP_002405576.1;Parent=gene4784;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405576.1,GeneID:7149173;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405576.1;transl_table=11
NC_011748.1	RefSeq	gene	4831270	4831584	.	+	.	ID=gene4785;Name=yjeO;Dbxref=GeneID:7149174;gbkey=Gene;gene=yjeO;locus_tag=EC55989_4715
NC_011748.1	RefSeq	CDS	4831270	4831584	.	+	0	ID=cds4429;Name=YP_002405577.1;Parent=gene4785;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002405577.1,GeneID:7149174;gbkey=CDS;product=inner membrane protein;protein_id=YP_002405577.1;transl_table=11
NC_011748.1	RefSeq	gene	4831613	4834936	.	-	.	ID=gene4786;Name=yjeP;Dbxref=GeneID:7149175;gbkey=Gene;gene=yjeP;locus_tag=EC55989_4716
NC_011748.1	RefSeq	CDS	4831613	4834936	.	-	0	ID=cds4430;Name=YP_002405578.1;Parent=gene4786;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002405578.1,GeneID:7149175;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405578.1;transl_table=11
NC_011748.1	RefSeq	gene	4834958	4835926	.	-	.	ID=gene4787;Name=psd;Dbxref=GeneID:7149176;gbkey=Gene;gene=psd;locus_tag=EC55989_4717
NC_011748.1	RefSeq	CDS	4834958	4835926	.	-	0	ID=cds4431;Name=YP_002405579.1;Parent=gene4787;Note=catalyzes the decarboxylation of phosphatidyl-L-serine to phosphatidylethanoleamine;Dbxref=Genbank:YP_002405579.1,GeneID:7149176;gbkey=CDS;product=phosphatidylserine decarboxylase;protein_id=YP_002405579.1;transl_table=11
NC_011748.1	RefSeq	gene	4836023	4837075	.	-	.	ID=gene4788;Name=rsgA;Dbxref=GeneID:7147268;gbkey=Gene;gene=rsgA;locus_tag=EC55989_4718
NC_011748.1	RefSeq	CDS	4836023	4837075	.	-	0	ID=cds4432;Name=YP_002405580.1;Parent=gene4788;Note=EngC%3B RsgA%3B CpgA%3B circularly permuted GTPase%3B ribosome small subunit-dependent GTPase A%3B has the pattern G4-G1-G3 as opposed to other GTPases%3B interacts strongly with 30S ribosome which stimulates GTPase activity;Dbxref=Genbank:YP_002405580.1,GeneID:7147268;gbkey=CDS;product=ribosome-associated GTPase;protein_id=YP_002405580.1;transl_table=11
NC_011748.1	RefSeq	gene	4837170	4837715	.	+	.	ID=gene4789;Name=orn;Dbxref=GeneID:7147534;gbkey=Gene;gene=orn;locus_tag=EC55989_4719
NC_011748.1	RefSeq	CDS	4837170	4837715	.	+	0	ID=cds4433;Name=YP_002405581.1;Parent=gene4789;Note=3%27-5%27 exoribonuclease specific for small oligoribonuclotides;Dbxref=Genbank:YP_002405581.1,GeneID:7147534;gbkey=CDS;product=oligoribonuclease;protein_id=YP_002405581.1;transl_table=11
NC_011748.1	RefSeq	gene	4837926	4838001	.	+	.	ID=gene4790;Name=EC55989_tRNA52;Dbxref=GeneID:7147080;gbkey=Gene;locus_tag=EC55989_tRNA52
NC_011748.1	RefSeq	tRNA	4837926	4838001	.	+	.	ID=rna212;Dbxref=GeneID:7147080;gbkey=tRNA;product=tRNA-Gly
NC_011748.1	RefSeq	exon	4837926	4838001	.	+	.	ID=id409;Parent=rna212;Dbxref=GeneID:7147080;gbkey=tRNA;product=tRNA-Gly
NC_011748.1	RefSeq	gene	4838038	4838113	.	+	.	ID=gene4791;Name=EC55989_tRNA53;Dbxref=GeneID:7145364;gbkey=Gene;locus_tag=EC55989_tRNA53
NC_011748.1	RefSeq	tRNA	4838038	4838113	.	+	.	ID=rna213;Dbxref=GeneID:7145364;gbkey=tRNA;product=tRNA-Gly
NC_011748.1	RefSeq	exon	4838038	4838113	.	+	.	ID=id410;Parent=rna213;Dbxref=GeneID:7145364;gbkey=tRNA;product=tRNA-Gly
NC_011748.1	RefSeq	gene	4838149	4838224	.	+	.	ID=gene4792;Name=EC55989_tRNA54;Dbxref=GeneID:7145365;gbkey=Gene;locus_tag=EC55989_tRNA54
NC_011748.1	RefSeq	tRNA	4838149	4838224	.	+	.	ID=rna214;Dbxref=GeneID:7145365;gbkey=tRNA;product=tRNA-Gly
NC_011748.1	RefSeq	exon	4838149	4838224	.	+	.	ID=id411;Parent=rna214;Dbxref=GeneID:7145365;gbkey=tRNA;product=tRNA-Gly
NC_011748.1	RefSeq	gene	4838494	4839633	.	-	.	ID=gene4793;Name=yjeS;Dbxref=GeneID:7145366;gbkey=Gene;gene=yjeS;locus_tag=EC55989_4721
NC_011748.1	RefSeq	CDS	4838494	4839633	.	-	0	ID=cds4434;Name=YP_002405582.1;Parent=gene4793;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pc :  carrier;Dbxref=Genbank:YP_002405582.1,GeneID:7145366;gbkey=CDS;product=Fe-S electron transport protein;protein_id=YP_002405582.1;transl_table=11
NC_011748.1	RefSeq	gene	4839632	4841179	.	+	.	ID=gene4794;Name=yjeF;Dbxref=GeneID:7149177;gbkey=Gene;gene=yjeF;locus_tag=EC55989_4722
NC_011748.1	RefSeq	CDS	4839632	4841179	.	+	0	ID=cds4435;Name=YP_002405583.1;Parent=gene4794;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002405583.1,GeneID:7149177;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405583.1;transl_table=11
NC_011748.1	RefSeq	gene	4841151	4841612	.	+	.	ID=gene4795;Name=yjeE;Dbxref=GeneID:7149168;gbkey=Gene;gene=yjeE;locus_tag=EC55989_4723
NC_011748.1	RefSeq	CDS	4841151	4841612	.	+	0	ID=cds4436;Name=YP_002405584.1;Parent=gene4795;Note=possibly involved in cell wall synthesis;Dbxref=Genbank:YP_002405584.1,GeneID:7149168;gbkey=CDS;product=ATPase;protein_id=YP_002405584.1;transl_table=11
NC_011748.1	RefSeq	gene	4841631	4842968	.	+	.	ID=gene4796;Name=amiB;Dbxref=GeneID:7149167;gbkey=Gene;gene=amiB;locus_tag=EC55989_4724
NC_011748.1	RefSeq	CDS	4841631	4842968	.	+	0	ID=cds4437;Name=YP_002405585.1;Parent=gene4796;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 21348478%2C 87242501%2C 1594459%2C 7511774%3B Product type e : enzyme;Dbxref=Genbank:YP_002405585.1,GeneID:7149167;gbkey=CDS;product=N-acetylmuramoyl-l-alanine amidase II;protein_id=YP_002405585.1;transl_table=11
NC_011748.1	RefSeq	gene	4842978	4844825	.	+	.	ID=gene4797;Name=mutL;Dbxref=GeneID:7145491;gbkey=Gene;gene=mutL;locus_tag=EC55989_4725
NC_011748.1	RefSeq	CDS	4842978	4844825	.	+	0	ID=cds4438;Name=YP_002405586.1;Parent=gene4797;Note=This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. Promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex;Dbxref=Genbank:YP_002405586.1,GeneID:7145491;gbkey=CDS;product=DNA mismatch repair protein;protein_id=YP_002405586.1;transl_table=11
NC_011748.1	RefSeq	gene	4844818	4845768	.	+	.	ID=gene4798;Name=miaA;Dbxref=GeneID:7146932;gbkey=Gene;gene=miaA;locus_tag=EC55989_4726
NC_011748.1	RefSeq	CDS	4844818	4845768	.	+	0	ID=cds4439;Name=YP_002405587.1;Parent=gene4798;Note=IPP transferase%3B isopentenyltransferase%3B involved in tRNA modification%3B in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil%3B further tRNA modifications may occur%3B mutations in miaA result in defects in translation efficiency and fidelity;Dbxref=Genbank:YP_002405587.1,GeneID:7146932;gbkey=CDS;product=tRNA delta%282%29-isopentenylpyrophosphate transferase;protein_id=YP_002405587.1;transl_table=11
NC_011748.1	RefSeq	gene	4845854	4846162	.	+	.	ID=gene4799;Name=hfq;Dbxref=GeneID:7146852;gbkey=Gene;gene=hfq;locus_tag=EC55989_4727
NC_011748.1	RefSeq	CDS	4845854	4846162	.	+	0	ID=cds4440;Name=YP_002405588.1;Parent=gene4799;Note=Stimulates the elongation of poly%28A%29 tails;Dbxref=Genbank:YP_002405588.1,GeneID:7146852;gbkey=CDS;product=RNA-binding protein Hfq;protein_id=YP_002405588.1;transl_table=11
NC_011748.1	RefSeq	gene	4846239	4847519	.	+	.	ID=gene4800;Name=hflX;Dbxref=GeneID:7146424;gbkey=Gene;gene=hflX;locus_tag=EC55989_4728
NC_011748.1	RefSeq	CDS	4846239	4847519	.	+	0	ID=cds4441;Name=YP_002405589.1;Parent=gene4800;Note=involved in modulation of proteins HflK and HflC%3B part of the hflA locus %28high frequency of lysogenization%29 which governs the lysis-lysogeny decision of bacteriophage lambda by controlling stability of the phage cII protein;Dbxref=Genbank:YP_002405589.1,GeneID:7146424;gbkey=CDS;product=GTPase HflX;protein_id=YP_002405589.1;transl_table=11
NC_011748.1	RefSeq	gene	4847605	4848864	.	+	.	ID=gene4801;Name=hflK;Dbxref=GeneID:7146423;gbkey=Gene;gene=hflK;locus_tag=EC55989_4729
NC_011748.1	RefSeq	CDS	4847605	4848864	.	+	0	ID=cds4442;Name=YP_002405590.1;Parent=gene4801;Note=with HflC inhibits proteolysis of lambda cII protein by FtsH;Dbxref=Genbank:YP_002405590.1,GeneID:7146423;gbkey=CDS;product=FtsH protease regulator HflK;protein_id=YP_002405590.1;transl_table=11
NC_011748.1	RefSeq	gene	4848867	4849871	.	+	.	ID=gene4802;Name=hflC;Dbxref=GeneID:7146422;gbkey=Gene;gene=hflC;locus_tag=EC55989_4730
NC_011748.1	RefSeq	CDS	4848867	4849871	.	+	0	ID=cds4443;Name=YP_002405591.1;Parent=gene4802;Note=with HflK inhibits proteolysis of lambda cII protein by FtsH;Dbxref=Genbank:YP_002405591.1,GeneID:7146422;gbkey=CDS;product=FtsH protease regulator HflC;protein_id=YP_002405591.1;transl_table=11
NC_011748.1	RefSeq	gene	4849953	4850150	.	+	.	ID=gene4803;Name=yjeT;Dbxref=GeneID:7146420;gbkey=Gene;gene=yjeT;locus_tag=EC55989_4731
NC_011748.1	RefSeq	CDS	4849953	4850150	.	+	0	ID=cds4444;Name=YP_002405592.1;Parent=gene4803;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002405592.1,GeneID:7146420;gbkey=CDS;product=inner membrane protein;protein_id=YP_002405592.1;transl_table=11
NC_011748.1	RefSeq	gene	4850254	4851552	.	+	.	ID=gene4804;Name=purA;Dbxref=GeneID:7149178;gbkey=Gene;gene=purA;locus_tag=EC55989_4732
NC_011748.1	RefSeq	CDS	4850254	4851552	.	+	0	ID=cds4445;Name=YP_002405593.1;Parent=gene4804;Note=catalyzes the formation of N6-%281%2C2%2C-dicarboxyethyl%29-AMP from L-aspartate%2C inosine monophosphate and GTP in AMP biosynthesis;Dbxref=Genbank:YP_002405593.1,GeneID:7149178;gbkey=CDS;product=adenylosuccinate synthetase;protein_id=YP_002405593.1;transl_table=11
NC_011748.1	RefSeq	gene	4851757	4852182	.	+	.	ID=gene4805;Name=nsrR;Dbxref=GeneID:7147292;gbkey=Gene;gene=nsrR;locus_tag=EC55989_4733
NC_011748.1	RefSeq	CDS	4851757	4852182	.	+	0	ID=cds4446;Name=YP_002405594.1;Parent=gene4805;Note=negatively regulates the transcription of genes upregulated by nitrosative stress;Dbxref=Genbank:YP_002405594.1,GeneID:7147292;gbkey=CDS;product=transcriptional repressor NsrR;protein_id=YP_002405594.1;transl_table=11
NC_011748.1	RefSeq	gene	4852221	4854662	.	+	.	ID=gene4806;Name=rnr;Dbxref=GeneID:7147034;gbkey=Gene;gene=rnr;locus_tag=EC55989_4734
NC_011748.1	RefSeq	CDS	4852221	4854662	.	+	0	ID=cds4447;Name=YP_002405595.1;Parent=gene4806;Note=3%27-5%27exoribonuclease that acts nonspecifically on poly%28A%29%2C poly%28U%29 and ribosomal RNAs;Dbxref=Genbank:YP_002405595.1,GeneID:7147034;gbkey=CDS;product=exoribonuclease R;protein_id=YP_002405595.1;transl_table=11
NC_011748.1	RefSeq	gene	4854842	4855573	.	+	.	ID=gene4807;Name=rlmB;Dbxref=GeneID:7147455;gbkey=Gene;gene=rlmB;locus_tag=EC55989_4735
NC_011748.1	RefSeq	CDS	4854842	4855573	.	+	0	ID=cds4448;Name=YP_002405596.1;Parent=gene4807;Note=Specifically methylates the ribose of guanosine 2251 in 23S rRNA;Dbxref=Genbank:YP_002405596.1,GeneID:7147455;gbkey=CDS;product=23S rRNA %28guanosine-2%27-O-%29-methyltransferase;protein_id=YP_002405596.1;transl_table=11
NC_011748.1	RefSeq	gene	4855700	4856101	.	+	.	ID=gene4808;Name=yjfI;Dbxref=GeneID:7147423;gbkey=Gene;gene=yjfI;locus_tag=EC55989_4736
NC_011748.1	RefSeq	CDS	4855700	4856101	.	+	0	ID=cds4449;Name=YP_002405597.1;Parent=gene4808;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405597.1,GeneID:7147423;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405597.1;transl_table=11
NC_011748.1	RefSeq	gene	4856120	4856818	.	+	.	ID=gene4809;Name=yjfJ;Dbxref=GeneID:7149181;gbkey=Gene;gene=yjfJ;locus_tag=EC55989_4737
NC_011748.1	RefSeq	CDS	4856120	4856818	.	+	0	ID=cds4450;Name=YP_002405598.1;Parent=gene4809;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pr :  regulator;Dbxref=Genbank:YP_002405598.1,GeneID:7149181;gbkey=CDS;product=transcriptional regulator effector protein;protein_id=YP_002405598.1;transl_table=11
NC_011748.1	RefSeq	gene	4856869	4857528	.	+	.	ID=gene4810;Name=yjfK;Dbxref=GeneID:7149182;gbkey=Gene;gene=yjfK;locus_tag=EC55989_4738
NC_011748.1	RefSeq	CDS	4856869	4857528	.	+	0	ID=cds4451;Name=YP_002405599.1;Parent=gene4810;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405599.1,GeneID:7149182;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405599.1;transl_table=11
NC_011748.1	RefSeq	gene	4857546	4857944	.	+	.	ID=gene4811;Name=yjfL;Dbxref=GeneID:7149183;gbkey=Gene;gene=yjfL;locus_tag=EC55989_4739
NC_011748.1	RefSeq	CDS	4857546	4857944	.	+	0	ID=cds4452;Name=YP_002405600.1;Parent=gene4811;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002405600.1,GeneID:7149183;gbkey=CDS;product=inner membrane protein;protein_id=YP_002405600.1;transl_table=11
NC_011748.1	RefSeq	gene	4857863	4857970	.	-	.	ID=gene4812;Name=EC55989_4740;Dbxref=GeneID:7149184;gbkey=Gene;locus_tag=EC55989_4740
NC_011748.1	RefSeq	CDS	4857863	4857970	.	-	0	ID=cds4453;Name=YP_002405601.1;Parent=gene4812;Dbxref=Genbank:YP_002405601.1,GeneID:7149184;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405601.1;transl_table=11
NC_011748.1	RefSeq	gene	4857954	4858592	.	+	.	ID=gene4813;Name=yjfM;Dbxref=GeneID:7145156;gbkey=Gene;gene=yjfM;locus_tag=EC55989_4741
NC_011748.1	RefSeq	CDS	4857954	4858592	.	+	0	ID=cds4454;Name=YP_002405602.1;Parent=gene4813;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405602.1,GeneID:7145156;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405602.1;transl_table=11
NC_011748.1	RefSeq	gene	4858595	4859758	.	+	.	ID=gene4814;Name=yjfC;Dbxref=GeneID:7149185;gbkey=Gene;gene=yjfC;locus_tag=EC55989_4743
NC_011748.1	RefSeq	CDS	4858595	4859758	.	+	0	ID=cds4455;Name=YP_002405603.1;Parent=gene4814;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002405603.1,GeneID:7149185;gbkey=CDS;product=synthetase%2Famidase;protein_id=YP_002405603.1;transl_table=11
NC_011748.1	RefSeq	gene	4859842	4861467	.	+	.	ID=gene4815;Name=aidB;Dbxref=GeneID:7149179;gbkey=Gene;gene=aidB;locus_tag=EC55989_4744
NC_011748.1	RefSeq	CDS	4859842	4861467	.	+	0	ID=cds4456;Name=YP_002405604.1;Parent=gene4815;Note=catalyzes the formation of 3-methylcrotonyl-CoA from isovaleryl-CoA;Dbxref=Genbank:YP_002405604.1,GeneID:7149179;gbkey=CDS;product=isovaleryl CoA dehydrogenase;protein_id=YP_002405604.1;transl_table=11
NC_011748.1	RefSeq	gene	4861584	4861859	.	-	.	ID=gene4816;Name=yjfN;Dbxref=GeneID:7145476;gbkey=Gene;gene=yjfN;locus_tag=EC55989_4745
NC_011748.1	RefSeq	CDS	4861584	4861859	.	-	0	ID=cds4457;Name=YP_002405605.1;Parent=gene4816;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405605.1,GeneID:7145476;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405605.1;transl_table=11
NC_011748.1	RefSeq	gene	4862008	4862337	.	-	.	ID=gene4817;Name=yjfO;Dbxref=GeneID:7149186;gbkey=Gene;gene=yjfO;locus_tag=EC55989_4746
NC_011748.1	RefSeq	CDS	4862008	4862337	.	-	0	ID=cds4458;Name=YP_002405606.1;Parent=gene4817;Note=in Escherichia coli%2C mutation of this gene affects biofilm maturation%2C stress response%2C and motility;Dbxref=Genbank:YP_002405606.1,GeneID:7149186;gbkey=CDS;product=biofilm stress and motility protein A;protein_id=YP_002405606.1;transl_table=11
NC_011748.1	RefSeq	gene	4862519	4863268	.	+	.	ID=gene4818;Name=yjfP;Dbxref=GeneID:7149187;gbkey=Gene;gene=yjfP;locus_tag=EC55989_4747
NC_011748.1	RefSeq	CDS	4862519	4863268	.	+	0	ID=cds4459;Name=YP_002405607.1;Parent=gene4818;Note=YjfP%3B esterase activity towards palmitoyl-CoA and pNP-butyrate in vitro%3B unknown function and substrate in vivo;Dbxref=Genbank:YP_002405607.1,GeneID:7149187;gbkey=CDS;product=esterase;protein_id=YP_002405607.1;transl_table=11
NC_011748.1	RefSeq	gene	4863265	4864020	.	-	.	ID=gene4819;Name=ulaR;Dbxref=GeneID:7149188;gbkey=Gene;gene=ulaR;locus_tag=EC55989_4748
NC_011748.1	RefSeq	CDS	4863265	4864020	.	-	0	ID=cds4460;Name=YP_002405608.1;Parent=gene4819;Note=negative regulator of ulaG and ulaABCDEF;Dbxref=Genbank:YP_002405608.1,GeneID:7149188;gbkey=CDS;product=transcriptional repressor UlaR;protein_id=YP_002405608.1;transl_table=11
NC_011748.1	RefSeq	gene	4864128	4865192	.	-	.	ID=gene4820;Name=ulaG;Dbxref=GeneID:7147920;gbkey=Gene;gene=ulaG;locus_tag=EC55989_4749
NC_011748.1	RefSeq	CDS	4864128	4865192	.	-	0	ID=cds4461;Name=YP_002405609.1;Parent=gene4820;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 12644495%2C 15808744%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002405609.1,GeneID:7147920;gbkey=CDS;product=L-ascorbate 6-phosphate lactonase;protein_id=YP_002405609.1;transl_table=11
NC_011748.1	RefSeq	gene	4865547	4866944	.	+	.	ID=gene4821;Name=ulaA;Dbxref=GeneID:7147919;gbkey=Gene;gene=ulaA;locus_tag=EC55989_4750
NC_011748.1	RefSeq	CDS	4865547	4866944	.	+	0	ID=cds4462;Name=YP_002405610.1;Parent=gene4821;Note=membrane component%3B functions with enzymes IIB %28sgaB%3B ulaB%29 and IIA %28sgaA%3B ulaC%29 enzyme I and HPr for anaerobic utilization and uptake of L-ascorbate%3B sgaTBA are regulated by yifQ as well as Crp and Fnr;Dbxref=Genbank:YP_002405610.1,GeneID:7147919;gbkey=CDS;product=PTS system ascorbate-specific transporter subunit IIC;protein_id=YP_002405610.1;transl_table=11
NC_011748.1	RefSeq	gene	4866960	4867265	.	+	.	ID=gene4822;Name=ulaB;Dbxref=GeneID:7147913;gbkey=Gene;gene=ulaB;locus_tag=EC55989_4751
NC_011748.1	RefSeq	CDS	4866960	4867265	.	+	0	ID=cds4463;Name=YP_002405611.1;Parent=gene4822;Note=involved in the phosphorylation and transport of sugars across the cell membrane%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel for the sugar uptake;Dbxref=Genbank:YP_002405611.1,GeneID:7147913;gbkey=CDS;product=PTS system L-ascorbate-specific transporter subunit IIB;protein_id=YP_002405611.1;transl_table=11
NC_011748.1	RefSeq	gene	4867275	4867739	.	+	.	ID=gene4823;Name=ulaC;Dbxref=GeneID:7147914;gbkey=Gene;gene=ulaC;locus_tag=EC55989_4752
NC_011748.1	RefSeq	CDS	4867275	4867739	.	+	0	ID=cds4464;Name=YP_002405612.1;Parent=gene4823;Note=involved in the phosphorylation and transport of sugars across the cell membrane%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel for the sugar uptake;Dbxref=Genbank:YP_002405612.1,GeneID:7147914;gbkey=CDS;product=PTS system L-ascorbate-specific transporter subunit IIA;protein_id=YP_002405612.1;transl_table=11
NC_011748.1	RefSeq	gene	4867753	4868403	.	+	.	ID=gene4824;Name=ulaD;Dbxref=GeneID:7147915;gbkey=Gene;gene=ulaD;locus_tag=EC55989_4753
NC_011748.1	RefSeq	CDS	4867753	4868403	.	+	0	ID=cds4465;Name=YP_002405613.1;Parent=gene4824;Note=catalyzes the formation of L-xylulose-5-phosphate from 3-keto-L-gulonate-6-phosphate in anaerobic L-ascorbate utilization;Dbxref=Genbank:YP_002405613.1,GeneID:7147915;gbkey=CDS;product=3-keto-L-gulonate-6-phosphate decarboxylase;protein_id=YP_002405613.1;transl_table=11
NC_011748.1	RefSeq	gene	4868413	4869267	.	+	.	ID=gene4825;Name=ulaE;Dbxref=GeneID:7147916;gbkey=Gene;gene=ulaE;locus_tag=EC55989_4754
NC_011748.1	RefSeq	CDS	4868413	4869267	.	+	0	ID=cds4466;Name=YP_002405614.1;Parent=gene4825;Note=UlaE%3B catalyzes the epimerization of L-ribulose-5-phosphate into L-xylulose-5-phosphate%3B part of the anaerobic L-ascorbate degradation pathway;Dbxref=Genbank:YP_002405614.1,GeneID:7147916;gbkey=CDS;product=L-xylulose 5-phosphate 3-epimerase;protein_id=YP_002405614.1;transl_table=11
NC_011748.1	RefSeq	gene	4869267	4869953	.	+	.	ID=gene4826;Name=sgaE;Dbxref=GeneID:7147917;gbkey=Gene;gene=sgaE;locus_tag=EC55989_4755
NC_011748.1	RefSeq	CDS	4869267	4869953	.	+	0	ID=cds4467;Name=YP_002405615.1;Parent=gene4826;Note=catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate%3B links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source;Dbxref=Genbank:YP_002405615.1,GeneID:7147917;gbkey=CDS;product=L-ribulose-5-phosphate 4-epimerase;protein_id=YP_002405615.1;transl_table=11
NC_011748.1	RefSeq	gene	4870050	4870601	.	+	.	ID=gene4827;Name=yagU;Dbxref=GeneID:7147918;gbkey=Gene;gene=yagU;locus_tag=EC55989_4756
NC_011748.1	RefSeq	CDS	4870050	4870601	.	+	0	ID=cds4468;Name=YP_002405616.1;Parent=gene4827;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002405616.1,GeneID:7147918;gbkey=CDS;product=Inner membrane protein yagU;protein_id=YP_002405616.1;transl_table=11
NC_011748.1	RefSeq	gene	4870676	4870951	.	-	.	ID=gene4828;Name=yjfY;Dbxref=GeneID:7148054;gbkey=Gene;gene=yjfY;locus_tag=EC55989_4757
NC_011748.1	RefSeq	CDS	4870676	4870951	.	-	0	ID=cds4469;Name=YP_002405617.1;Parent=gene4828;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405617.1,GeneID:7148054;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405617.1;transl_table=11
NC_011748.1	RefSeq	gene	4871278	4871673	.	+	.	ID=gene4829;Name=rpsF;Dbxref=GeneID:7149189;gbkey=Gene;gene=rpsF;locus_tag=EC55989_4758
NC_011748.1	RefSeq	CDS	4871278	4871673	.	+	0	ID=cds4470;Name=YP_002405618.1;Parent=gene4829;Note=binds cooperatively with S18 to the S15-16S complex%2C allowing platform assembly to continue with S11 and S21;Dbxref=Genbank:YP_002405618.1,GeneID:7149189;gbkey=CDS;product=30S ribosomal protein S6;protein_id=YP_002405618.1;transl_table=11
NC_011748.1	RefSeq	gene	4871680	4871994	.	+	.	ID=gene4830;Name=priB;Dbxref=GeneID:7147510;gbkey=Gene;gene=priB;locus_tag=EC55989_4759
NC_011748.1	RefSeq	CDS	4871680	4871994	.	+	0	ID=cds4471;Name=YP_002405619.1;Parent=gene4830;Note=binds single-stranded DNA at the primosome assembly site;Dbxref=Genbank:YP_002405619.1,GeneID:7147510;gbkey=CDS;product=primosomal replication protein N;protein_id=YP_002405619.1;transl_table=11
NC_011748.1	RefSeq	gene	4871999	4872226	.	+	.	ID=gene4831;Name=rpsR;Dbxref=GeneID:7147245;gbkey=Gene;gene=rpsR;locus_tag=EC55989_4760
NC_011748.1	RefSeq	CDS	4871999	4872226	.	+	0	ID=cds4472;Name=YP_002405620.1;Parent=gene4831;Note=binds as a heterodimer with protein S6 to the central domain of the 16S rRNA%3B helps stabilize the platform of the 30S subunit;Dbxref=Genbank:YP_002405620.1,GeneID:7147245;gbkey=CDS;product=30S ribosomal protein S18;protein_id=YP_002405620.1;transl_table=11
NC_011748.1	RefSeq	gene	4872268	4872717	.	+	.	ID=gene4832;Name=rplI;Dbxref=GeneID:7147522;gbkey=Gene;gene=rplI;locus_tag=EC55989_4761
NC_011748.1	RefSeq	CDS	4872268	4872717	.	+	0	ID=cds4473;Name=YP_002405621.1;Parent=gene4832;Note=in Escherichia coli this protein is wrapped around the base of the L1 stalk;Dbxref=Genbank:YP_002405621.1,GeneID:7147522;gbkey=CDS;product=50S ribosomal protein L9;protein_id=YP_002405621.1;transl_table=11
NC_011748.1	RefSeq	gene	4872788	4873582	.	-	.	ID=gene4833;Name=yjfZ;Dbxref=GeneID:7147469;gbkey=Gene;gene=yjfZ;locus_tag=EC55989_4762
NC_011748.1	RefSeq	CDS	4872788	4873582	.	-	0	ID=cds4474;Name=YP_002405622.1;Parent=gene4833;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405622.1,GeneID:7147469;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405622.1;transl_table=11
NC_011748.1	RefSeq	gene	4873929	4874351	.	+	.	ID=gene4834;Name=EC55989_4763;Dbxref=GeneID:7149190;gbkey=Gene;locus_tag=EC55989_4763
NC_011748.1	RefSeq	CDS	4873929	4874351	.	+	0	ID=cds4475;Name=YP_002405623.1;Parent=gene4834;Dbxref=Genbank:YP_002405623.1,GeneID:7149190;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405623.1;transl_table=11
NC_011748.1	RefSeq	gene	4874205	4874636	.	-	.	ID=gene4835;Name=EC55989_4764;Dbxref=GeneID:7145157;gbkey=Gene;locus_tag=EC55989_4764
NC_011748.1	RefSeq	CDS	4874205	4874636	.	-	0	ID=cds4476;Name=YP_002405624.1;Parent=gene4835;Note=Evidence 2b : Function of strongly homologous gene%3B Product type e : enzyme;Dbxref=Genbank:YP_002405624.1,GeneID:7145157;gbkey=CDS;product=transposase;protein_id=YP_002405624.1;transl_table=11
NC_011748.1	RefSeq	gene	4874644	4875852	.	+	.	ID=gene4836;Name=ydcM;Dbxref=GeneID:7145158;gbkey=Gene;gene=ydcM;locus_tag=EC55989_4765
NC_011748.1	RefSeq	CDS	4874644	4875852	.	+	0	ID=cds4477;Name=YP_002405625.1;Parent=gene4836;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002405625.1,GeneID:7145158;gbkey=CDS;product=transposase;protein_id=YP_002405625.1;transl_table=11
NC_011748.1	RefSeq	gene	4875987	4876625	.	-	.	ID=gene4837;Name=ytfB;Dbxref=GeneID:7148393;gbkey=Gene;gene=ytfB;locus_tag=EC55989_4766
NC_011748.1	RefSeq	CDS	4875987	4876625	.	-	0	ID=cds4478;Name=YP_002405626.1;Parent=gene4837;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 8559074%3B Product type ps :  structure;Dbxref=Genbank:YP_002405626.1,GeneID:7148393;gbkey=CDS;product=cell envelope opacity-associated protein;protein_id=YP_002405626.1;transl_table=11
NC_011748.1	RefSeq	gene	4876844	4877464	.	+	.	ID=gene4838;Name=fklB;Dbxref=GeneID:7149469;gbkey=Gene;gene=fklB;locus_tag=EC55989_4767
NC_011748.1	RefSeq	CDS	4876844	4877464	.	+	0	ID=cds4479;Name=YP_002405627.1;Parent=gene4838;Note=FKBP-type%3B rotamase%3B catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides;Dbxref=Genbank:YP_002405627.1,GeneID:7149469;gbkey=CDS;product=peptidyl-prolyl cis-trans isomerase;protein_id=YP_002405627.1;transl_table=11
NC_011748.1	RefSeq	gene	4877773	4879185	.	+	.	ID=gene4839;Name=cycA;Dbxref=GeneID:7146119;gbkey=Gene;gene=cycA;locus_tag=EC55989_4768
NC_011748.1	RefSeq	CDS	4877773	4879185	.	+	0	ID=cds4480;Name=YP_002405628.1;Parent=gene4839;Note=involved in the transport across the cytoplasmic membrane of D-alanine%2C D-serine and glycine;Dbxref=Genbank:YP_002405628.1,GeneID:7146119;gbkey=CDS;product=D-alanine%2FD-serine%2Fglycine permease;protein_id=YP_002405628.1;transl_table=11
NC_011748.1	RefSeq	gene	4879230	4879892	.	-	.	ID=gene4840;Name=ytfE;Dbxref=GeneID:7145806;gbkey=Gene;gene=ytfE;locus_tag=EC55989_4769
NC_011748.1	RefSeq	CDS	4879230	4879892	.	-	0	ID=cds4481;Name=YP_002405629.1;Parent=gene4840;Note=Involved in anaerobic NO protection and iron metabolism;Dbxref=Genbank:YP_002405629.1,GeneID:7145806;gbkey=CDS;product=iron-sulfur cluster repair di-iron protein;protein_id=YP_002405629.1;transl_table=11
NC_011748.1	RefSeq	gene	4880000	4880974	.	-	.	ID=gene4841;Name=ytfF;Dbxref=GeneID:7149470;gbkey=Gene;gene=ytfF;locus_tag=EC55989_4770
NC_011748.1	RefSeq	CDS	4880000	4880974	.	-	0	ID=cds4482;Name=YP_002405630.1;Parent=gene4841;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002405630.1,GeneID:7149470;gbkey=CDS;product=inner membrane protein;protein_id=YP_002405630.1;transl_table=11
NC_011748.1	RefSeq	gene	4881073	4881933	.	-	.	ID=gene4842;Name=ytfG;Dbxref=GeneID:7149471;gbkey=Gene;gene=ytfG;locus_tag=EC55989_4771
NC_011748.1	RefSeq	CDS	4881073	4881933	.	-	0	ID=cds4483;Name=YP_002405631.1;Parent=gene4842;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 14747727%3B Product type e : enzyme;Dbxref=Genbank:YP_002405631.1,GeneID:7149471;gbkey=CDS;product=NAD%28P%29H:quinone oxidoreductase;protein_id=YP_002405631.1;transl_table=11
NC_011748.1	RefSeq	gene	4882022	4882402	.	+	.	ID=gene4843;Name=ytfH;Dbxref=GeneID:7149472;gbkey=Gene;gene=ytfH;locus_tag=EC55989_4772
NC_011748.1	RefSeq	CDS	4882022	4882402	.	+	0	ID=cds4484;Name=YP_002405632.1;Parent=gene4843;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 20088838%3B Product type pr :  regulator;Dbxref=Genbank:YP_002405632.1,GeneID:7149472;gbkey=CDS;product=transcriptional regulator;protein_id=YP_002405632.1;transl_table=11
NC_011748.1	RefSeq	gene	4882531	4884474	.	-	.	ID=gene4844;Name=cpdB;Dbxref=GeneID:7149473;gbkey=Gene;gene=cpdB;locus_tag=EC55989_4773
NC_011748.1	RefSeq	CDS	4882531	4884474	.	-	0	ID=cds4485;Name=YP_002405633.1;Parent=gene4844;Note=periplasmic enzyme%3B functions during ribonucleic acid degradation%3B 2%27%2C3%27-cyclic nucleotides are first converted to 3%27-nucleotide and then cleaved to yield a ribonucleotide and a phosphate;Dbxref=Genbank:YP_002405633.1,GeneID:7149473;gbkey=CDS;product=bifunctional 2%27%2C3%27-cyclic nucleotide 2%27-phosphodiesterase%2F3%27-nucleotidase periplasmic protein;protein_id=YP_002405633.1;transl_table=11
NC_011748.1	RefSeq	gene	4884664	4885404	.	+	.	ID=gene4845;Name=cysQ;Dbxref=GeneID:7145745;gbkey=Gene;gene=cysQ;locus_tag=EC55989_4774
NC_011748.1	RefSeq	CDS	4884664	4885404	.	+	0	ID=cds4486;Name=YP_002405634.1;Parent=gene4845;Note=catalyzes the formation of AMP from adenosine-3%27%2C5%27-bisphosphate;Dbxref=Genbank:YP_002405634.1,GeneID:7145745;gbkey=CDS;product=adenosine-3%27%282%27%29%2C5%27-bisphosphate nucleotidase;protein_id=YP_002405634.1;transl_table=11
NC_011748.1	RefSeq	gene	4885394	4885951	.	-	.	ID=gene4846;Name=ytfJ;Dbxref=GeneID:7145833;gbkey=Gene;gene=ytfJ;locus_tag=EC55989_4775
NC_011748.1	RefSeq	CDS	4885394	4885951	.	-	0	ID=cds4487;Name=YP_002405635.1;Parent=gene4846;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 9298646%3B Product type pr :  regulator;Dbxref=Genbank:YP_002405635.1,GeneID:7145833;gbkey=CDS;product=transcriptional regulator;protein_id=YP_002405635.1;transl_table=11
NC_011748.1	RefSeq	gene	4886276	4886482	.	+	.	ID=gene4847;Name=ytfK;Dbxref=GeneID:7149474;gbkey=Gene;gene=ytfK;locus_tag=EC55989_4776
NC_011748.1	RefSeq	CDS	4886276	4886482	.	+	0	ID=cds4488;Name=YP_002405636.1;Parent=gene4847;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405636.1,GeneID:7149474;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405636.1;transl_table=11
NC_011748.1	RefSeq	gene	4886544	4887887	.	-	.	ID=gene4848;Name=ytfL;Dbxref=GeneID:7149475;gbkey=Gene;gene=ytfL;locus_tag=EC55989_4777
NC_011748.1	RefSeq	CDS	4886544	4887887	.	-	0	ID=cds4489;Name=YP_002405637.1;Parent=gene4848;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002405637.1,GeneID:7149475;gbkey=CDS;product=inner membrane protein;protein_id=YP_002405637.1;transl_table=11
NC_011748.1	RefSeq	gene	4888210	4888848	.	-	.	ID=gene4849;Name=msrA;Dbxref=GeneID:7149476;gbkey=Gene;gene=msrA;locus_tag=EC55989_4778
NC_011748.1	RefSeq	CDS	4888210	4888848	.	-	0	ID=cds4490;Name=YP_002405638.1;Parent=gene4849;Note=this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form%3B provides protection against oxidative stress;Dbxref=Genbank:YP_002405638.1,GeneID:7149476;gbkey=CDS;product=methionine sulfoxide reductase A;protein_id=YP_002405638.1;transl_table=11
NC_011748.1	RefSeq	gene	4889054	4890787	.	+	.	ID=gene4850;Name=ytfM;Dbxref=GeneID:7146910;gbkey=Gene;gene=ytfM;locus_tag=EC55989_4779
NC_011748.1	RefSeq	CDS	4889054	4890787	.	+	0	ID=cds4491;Name=YP_002405639.1;Parent=gene4850;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002405639.1,GeneID:7146910;gbkey=CDS;product=outer membrane protein;protein_id=YP_002405639.1;transl_table=11
NC_011748.1	RefSeq	gene	4890784	4894563	.	+	.	ID=gene4851;Name=ytfN;Dbxref=GeneID:7149477;gbkey=Gene;gene=ytfN;locus_tag=EC55989_4780
NC_011748.1	RefSeq	CDS	4890784	4894563	.	+	0	ID=cds4492;Name=YP_002405640.1;Parent=gene4851;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405640.1,GeneID:7149477;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405640.1;transl_table=11
NC_011748.1	RefSeq	gene	4894566	4894907	.	+	.	ID=gene4852;Name=ytfP;Dbxref=GeneID:7149478;gbkey=Gene;gene=ytfP;locus_tag=EC55989_4781
NC_011748.1	RefSeq	CDS	4894566	4894907	.	+	0	ID=cds4493;Name=YP_002405641.1;Parent=gene4852;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405641.1,GeneID:7149478;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405641.1;transl_table=11
NC_011748.1	RefSeq	gene	4895119	4895370	.	+	.	ID=gene4853;Name=chpS;Dbxref=GeneID:7149479;gbkey=Gene;gene=chpS;locus_tag=EC55989_4782
NC_011748.1	RefSeq	CDS	4895119	4895370	.	+	0	ID=cds4494;Name=YP_002405642.1;Parent=gene4853;Note=part of the toxin-antitoxin ChpB-ChpS system;Dbxref=Genbank:YP_002405642.1,GeneID:7149479;gbkey=CDS;product=antitoxin ChpS;protein_id=YP_002405642.1;transl_table=11
NC_011748.1	RefSeq	gene	4895364	4895714	.	+	.	ID=gene4854;Name=chpB;Dbxref=GeneID:7145706;gbkey=Gene;gene=chpB;locus_tag=EC55989_4783
NC_011748.1	RefSeq	CDS	4895364	4895714	.	+	0	ID=cds4495;Name=YP_002405643.1;Parent=gene4854;Note=toxin of the ChpB-ChpS toxin-antitoxin system;Dbxref=Genbank:YP_002405643.1,GeneID:7145706;gbkey=CDS;product=toxin ChpB;protein_id=YP_002405643.1;transl_table=11
NC_011748.1	RefSeq	gene	4895794	4896324	.	-	.	ID=gene4855;Name=ppa;Dbxref=GeneID:7145704;gbkey=Gene;gene=ppa;locus_tag=EC55989_4784
NC_011748.1	RefSeq	CDS	4895794	4896324	.	-	0	ID=cds4496;Name=YP_002405644.1;Parent=gene4855;Note=catalyzes the hydrolysis of pyrophosphate to phosphate;Dbxref=Genbank:YP_002405644.1,GeneID:7145704;gbkey=CDS;product=inorganic pyrophosphatase;protein_id=YP_002405644.1;transl_table=11
NC_011748.1	RefSeq	gene	4896634	4897590	.	+	.	ID=gene4856;Name=ytfQ;Dbxref=GeneID:7147220;gbkey=Gene;gene=ytfQ;locus_tag=EC55989_4786
NC_011748.1	RefSeq	CDS	4896634	4897590	.	+	0	ID=cds4497;Name=YP_002405645.1;Parent=gene4856;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 9298646%3B Product type pt :  transporter;Dbxref=Genbank:YP_002405645.1,GeneID:7147220;gbkey=CDS;product=sugar transporter subunit: periplasmic-binding component of ABC superfamily;protein_id=YP_002405645.1;transl_table=11
NC_011748.1	RefSeq	gene	4897900	4899402	.	+	.	ID=gene4857;Name=ytfR;Dbxref=GeneID:7149480;gbkey=Gene;gene=ytfR;locus_tag=EC55989_4787
NC_011748.1	RefSeq	CDS	4897900	4899402	.	+	0	ID=cds4498;Name=YP_002405646.1;Parent=gene4857;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002405646.1,GeneID:7149480;gbkey=CDS;product=sugar transporter subunit: ATP-binding component of ABC superfamily;protein_id=YP_002405646.1;transl_table=11
NC_011748.1	RefSeq	gene	4899416	4900438	.	+	.	ID=gene4858;Name=ytfT;Dbxref=GeneID:7149481;gbkey=Gene;gene=ytfT;locus_tag=EC55989_4788
NC_011748.1	RefSeq	CDS	4899416	4900438	.	+	0	ID=cds4499;Name=YP_002405647.1;Parent=gene4858;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002405647.1,GeneID:7149481;gbkey=CDS;product=sugar transporter subunit: membrane component of ABC superfamily;protein_id=YP_002405647.1;transl_table=11
NC_011748.1	RefSeq	gene	4900425	4901420	.	+	.	ID=gene4859;Name=yjfF;Dbxref=GeneID:7149482;gbkey=Gene;gene=yjfF;locus_tag=EC55989_4789
NC_011748.1	RefSeq	CDS	4900425	4901420	.	+	0	ID=cds4500;Name=YP_002405648.1;Parent=gene4859;Note=membrane component of a  sugar ABC transporter system;Dbxref=Genbank:YP_002405648.1,GeneID:7149482;gbkey=CDS;product=ABC transporter permease;protein_id=YP_002405648.1;transl_table=11
NC_011748.1	RefSeq	gene	4901453	4902451	.	-	.	ID=gene4860;Name=fbp;Dbxref=GeneID:7149180;gbkey=Gene;gene=fbp;locus_tag=EC55989_4790
NC_011748.1	RefSeq	CDS	4901453	4902451	.	-	0	ID=cds4501;Name=YP_002405649.1;Parent=gene4860;Note=catalyzes the formation of D-fructose 6-phosphate from fructose-1%2C6-bisphosphate;Dbxref=Genbank:YP_002405649.1,GeneID:7149180;gbkey=CDS;product=fructose-1%2C6-bisphosphatase;protein_id=YP_002405649.1;transl_table=11
NC_011748.1	RefSeq	gene	4902627	4904000	.	+	.	ID=gene4861;Name=mpl;Dbxref=GeneID:7146064;gbkey=Gene;gene=mpl;locus_tag=EC55989_4791
NC_011748.1	RefSeq	CDS	4902627	4904000	.	+	0	ID=cds4502;Name=YP_002405650.1;Parent=gene4861;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 96404780%2C 2843822%2C 7984428%2C 8808921%3B Product type e : enzyme;Dbxref=Genbank:YP_002405650.1,GeneID:7146064;gbkey=CDS;product=UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase;protein_id=YP_002405650.1;transl_table=11
NC_011748.1	RefSeq	gene	4904151	4904702	.	-	.	ID=gene4862;Name=yjgA;Dbxref=GeneID:7146891;gbkey=Gene;gene=yjgA;locus_tag=EC55989_4792
NC_011748.1	RefSeq	CDS	4904151	4904702	.	-	0	ID=cds4503;Name=YP_002405651.1;Parent=gene4862;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405651.1,GeneID:7146891;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405651.1;transl_table=11
NC_011748.1	RefSeq	gene	4904796	4906148	.	+	.	ID=gene4863;Name=pmbA;Dbxref=GeneID:7149191;gbkey=Gene;gene=pmbA;locus_tag=EC55989_4793
NC_011748.1	RefSeq	CDS	4904796	4906148	.	+	0	ID=cds4504;Name=YP_002405652.1;Parent=gene4863;Note=protease involved in proteolytic processing of the antibiotic Microcin B17 and in sensitivity to the DNA gyrase inhibitor LetD;Dbxref=Genbank:YP_002405652.1,GeneID:7149191;gbkey=CDS;product=peptidase PmbA;protein_id=YP_002405652.1;transl_table=11
NC_011748.1	RefSeq	gene	4906331	4906717	.	+	.	ID=gene4864;Name=cybC;Dbxref=GeneID:7147199;gbkey=Gene;gene=cybC;locus_tag=EC55989_4794
NC_011748.1	RefSeq	CDS	4906331	4906717	.	+	0	ID=cds4505;Name=YP_002405653.1;Parent=gene4864;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 1761034%2C 8499452%2C 10393541%3B Product type c : carrier;Dbxref=Genbank:YP_002405653.1,GeneID:7147199;gbkey=CDS;product=soluble cytochrome b562;protein_id=YP_002405653.1;transl_table=11
NC_011748.1	RefSeq	gene	4906762	4907226	.	-	.	ID=gene4865;Name=nrdG;Dbxref=GeneID:7145805;gbkey=Gene;gene=nrdG;locus_tag=EC55989_4795
NC_011748.1	RefSeq	CDS	4906762	4907226	.	-	0	ID=cds4506;Name=YP_002405654.1;Parent=gene4865;Note=activates anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions;Dbxref=Genbank:YP_002405654.1,GeneID:7145805;gbkey=CDS;product=anaerobic ribonucleotide reductase-activating protein;protein_id=YP_002405654.1;transl_table=11
NC_011748.1	RefSeq	gene	4907384	4909522	.	-	.	ID=gene4866;Name=nrdD;Dbxref=GeneID:7147023;gbkey=Gene;gene=nrdD;locus_tag=EC55989_4796
NC_011748.1	RefSeq	CDS	4907384	4909522	.	-	0	ID=cds4507;Name=YP_002405655.1;Parent=gene4866;Note=Catalyzes the reduction of nucleoside 5%27-triphosphates to 2%27-deoxynucleoside 5%27-triphosphates;Dbxref=Genbank:YP_002405655.1,GeneID:7147023;gbkey=CDS;product=anaerobic ribonucleoside triphosphate reductase;protein_id=YP_002405655.1;transl_table=11
NC_011748.1	RefSeq	gene	4909925	4911580	.	-	.	ID=gene4867;Name=treC;Dbxref=GeneID:7147020;gbkey=Gene;gene=treC;locus_tag=EC55989_4797
NC_011748.1	RefSeq	CDS	4909925	4911580	.	-	0	ID=cds4508;Name=YP_002405656.1;Parent=gene4867;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 90264345%2C 93302496%2C 8083158%2C 8421692%3B Product type e : enzyme;Dbxref=Genbank:YP_002405656.1,GeneID:7147020;gbkey=CDS;product=trehalose-6-phosphate hydrolase;protein_id=YP_002405656.1;transl_table=11
NC_011748.1	RefSeq	gene	4911630	4913051	.	-	.	ID=gene4868;Name=treB;Dbxref=GeneID:7147837;gbkey=Gene;gene=treB;locus_tag=EC55989_4798
NC_011748.1	RefSeq	CDS	4911630	4913051	.	-	0	ID=cds4509;Name=YP_002405657.1;Parent=gene4868;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;Dbxref=Genbank:YP_002405657.1,GeneID:7147837;gbkey=CDS;product=PTS system trehalose%28maltose%29-specific transporter subunit IIBC;protein_id=YP_002405657.1;transl_table=11
NC_011748.1	RefSeq	gene	4913170	4914117	.	-	.	ID=gene4869;Name=treR;Dbxref=GeneID:7147836;gbkey=Gene;gene=treR;locus_tag=EC55989_4799
NC_011748.1	RefSeq	CDS	4913170	4914117	.	-	0	ID=cds4510;Name=YP_002405658.1;Parent=gene4869;Note=regulates genes involved in trehalose metabolism%3B binds the intermediate trehalose-6-phosphate%3B binds a dimer%3B regulates treBC operon;Dbxref=Genbank:YP_002405658.1,GeneID:7147836;gbkey=CDS;product=trehalose repressor;protein_id=YP_002405658.1;transl_table=11
NC_011748.1	RefSeq	gene	4914496	4917192	.	+	.	ID=gene4870;Name=mgtA;Dbxref=GeneID:7147839;gbkey=Gene;gene=mgtA;locus_tag=EC55989_4800
NC_011748.1	RefSeq	CDS	4914496	4917192	.	+	0	ID=cds4511;Name=YP_002405659.1;Parent=gene4870;Note=P-type ATPase involved in magnesium influx;Dbxref=Genbank:YP_002405659.1,GeneID:7147839;gbkey=CDS;product=magnesium-transporting ATPase MgtA;protein_id=YP_002405659.1;transl_table=11
NC_011748.1	RefSeq	gene	4917420	4918400	.	-	.	ID=gene4871;Name=EC55989_4801;Dbxref=GeneID:7146843;gbkey=Gene;locus_tag=EC55989_4801
NC_011748.1	RefSeq	CDS	4917420	4918400	.	-	0	ID=cds4512;Name=YP_002405660.1;Parent=gene4871;Note=Evidence 2b : Function of strongly homologous gene%3B Product type e : enzyme;Dbxref=Genbank:YP_002405660.1,GeneID:7146843;gbkey=CDS;product=transposase%2C IS110 family;protein_id=YP_002405660.1;transl_table=11
NC_011748.1	RefSeq	gene	4918677	4919063	.	-	.	ID=gene4872;Name=yjgF;Dbxref=GeneID:7145159;gbkey=Gene;gene=yjgF;locus_tag=EC55989_4803
NC_011748.1	RefSeq	CDS	4918677	4919063	.	-	0	ID=cds4513;Name=YP_002405661.1;Parent=gene4872;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 12515541%2C 10493123%2C 10595546%2C 9298646%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002405661.1,GeneID:7145159;gbkey=CDS;product=ketoacid-binding protein;protein_id=YP_002405661.1;transl_table=11
NC_011748.1	RefSeq	gene	4919136	4919597	.	-	.	ID=gene4873;Name=pyrI;Dbxref=GeneID:7149194;gbkey=Gene;gene=pyrI;locus_tag=EC55989_4804
NC_011748.1	RefSeq	CDS	4919136	4919597	.	-	0	ID=cds4514;Name=YP_002405662.1;Parent=gene4873;Note=involved in the allosteric regulation of aspartate carbamoyltransferase;Dbxref=Genbank:YP_002405662.1,GeneID:7149194;gbkey=CDS;product=aspartate carbamoyltransferase;protein_id=YP_002405662.1;transl_table=11
NC_011748.1	RefSeq	gene	4919610	4920545	.	-	.	ID=gene4874;Name=pyrB;Dbxref=GeneID:7147324;gbkey=Gene;gene=pyrB;locus_tag=EC55989_4805
NC_011748.1	RefSeq	CDS	4919610	4920545	.	-	0	ID=cds4515;Name=YP_002405663.1;Parent=gene4874;Note=catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis;Dbxref=Genbank:YP_002405663.1,GeneID:7147324;gbkey=CDS;product=aspartate carbamoyltransferase;protein_id=YP_002405663.1;transl_table=11
NC_011748.1	RefSeq	gene	4920549	4920683	.	-	.	ID=gene4875;Name=pyrL;Dbxref=GeneID:7147317;gbkey=Gene;gene=pyrL;locus_tag=EC55989_5076
NC_011748.1	RefSeq	CDS	4920549	4920683	.	-	0	ID=cds4516;Name=YP_002405664.1;Parent=gene4875;Note=Evidence 1c : Function experimentally demonstrated in the studied genus%3B Product type l : leader peptide;Dbxref=Genbank:YP_002405664.1,GeneID:7147317;gbkey=CDS;product=pyrBI operon leader peptide;protein_id=YP_002405664.1;transl_table=11
NC_011748.1	RefSeq	gene	4920964	4921359	.	-	.	ID=gene4876;Name=yjgH;Dbxref=GeneID:7147325;gbkey=Gene;gene=yjgH;locus_tag=EC55989_4806
NC_011748.1	RefSeq	CDS	4920964	4921359	.	-	0	ID=cds4517;Name=YP_002405665.1;Parent=gene4876;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002405665.1,GeneID:7147325;gbkey=CDS;product=mRNA endoribonuclease;protein_id=YP_002405665.1;transl_table=11
NC_011748.1	RefSeq	gene	4921490	4922203	.	-	.	ID=gene4877;Name=yjgI;Dbxref=GeneID:7149195;gbkey=Gene;gene=yjgI;locus_tag=EC55989_4807
NC_011748.1	RefSeq	CDS	4921490	4922203	.	-	0	ID=cds4518;Name=YP_002405666.1;Parent=gene4877;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002405666.1,GeneID:7149195;gbkey=CDS;product=oxidoreductase;protein_id=YP_002405666.1;transl_table=11
NC_011748.1	RefSeq	gene	4922274	4922867	.	+	.	ID=gene4878;Name=yjgJ;Dbxref=GeneID:7149196;gbkey=Gene;gene=yjgJ;locus_tag=EC55989_4808
NC_011748.1	RefSeq	CDS	4922274	4922867	.	+	0	ID=cds4519;Name=YP_002405667.1;Parent=gene4878;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pr :  regulator;Dbxref=Genbank:YP_002405667.1,GeneID:7149196;gbkey=CDS;product=transcriptional regulator;protein_id=YP_002405667.1;transl_table=11
NC_011748.1	RefSeq	gene	4923012	4923464	.	+	.	ID=gene4879;Name=yjgK;Dbxref=GeneID:7149197;gbkey=Gene;gene=yjgK;locus_tag=EC55989_4809
NC_011748.1	RefSeq	CDS	4923012	4923464	.	+	0	ID=cds4520;Name=YP_002405668.1;Parent=gene4879;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 11115104;Dbxref=Genbank:YP_002405668.1,GeneID:7149197;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405668.1;transl_table=11
NC_011748.1	RefSeq	gene	4923587	4924906	.	+	.	ID=gene4880;Name=yjgL;Dbxref=GeneID:7149198;gbkey=Gene;gene=yjgL;locus_tag=EC55989_4810;pseudo=true
NC_011748.1	RefSeq	region	4923587	4924906	.	+	.	ID=id412;Note=fragment of conserved hypothetical protein %28part 1%29%3BEvidence 7 : Gene remnant;Dbxref=GeneID:7149198;gbkey=misc_feature
NC_011748.1	RefSeq	STS	4924460	4925352	.	+	.	ID=id413;Dbxref=UniSTS:474275;gbkey=STS
NC_011748.1	RefSeq	gene	4924903	4925148	.	+	.	ID=gene4881;Name=yjgL;Dbxref=GeneID:7149199;gbkey=Gene;gene=yjgL;locus_tag=EC55989_4811;pseudo=true
NC_011748.1	RefSeq	region	4924903	4925148	.	+	.	ID=id414;Note=fragment of conserved hypothetical protein %28part 2%29%3BEvidence 7 : Gene remnant;Dbxref=GeneID:7149199;gbkey=misc_feature
NC_011748.1	RefSeq	gene	4925249	4926253	.	-	.	ID=gene4882;Name=argI;Dbxref=GeneID:7149200;gbkey=Gene;gene=argI;locus_tag=EC55989_4812
NC_011748.1	RefSeq	CDS	4925249	4926253	.	-	0	ID=cds4521;Name=YP_002405669.1;Parent=gene4882;Note=catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation%3B E. coli K12 has two genes%2C argF and argI%2C capable of producing functional ornithine carbamoyltransferase. When both are active in the same cell%2C the two gene products form a family of four hybrid trimeric isoenzymes designated%2C FFF%2C FFI%2C FII%2C and III.;Dbxref=Genbank:YP_002405669.1,GeneID:7149200;gbkey=CDS;product=ornithine carbamoyltransferase subunit I;protein_id=YP_002405669.1;transl_table=11
NC_011748.1	RefSeq	gene	4926415	4926831	.	+	.	ID=gene4883;Name=yjgD;Dbxref=GeneID:7145531;gbkey=Gene;gene=yjgD;locus_tag=EC55989_4813
NC_011748.1	RefSeq	CDS	4926415	4926831	.	+	0	ID=cds4522;Name=YP_002405670.1;Parent=gene4883;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405670.1,GeneID:7145531;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405670.1;transl_table=11
NC_011748.1	RefSeq	gene	4926877	4927380	.	-	.	ID=gene4884;Name=yjgM;Dbxref=GeneID:7149193;gbkey=Gene;gene=yjgM;locus_tag=EC55989_4814
NC_011748.1	RefSeq	CDS	4926877	4927380	.	-	0	ID=cds4523;Name=YP_002405671.1;Parent=gene4884;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002405671.1,GeneID:7149193;gbkey=CDS;product=acetyltransferase;protein_id=YP_002405671.1;transl_table=11
NC_011748.1	RefSeq	gene	4927573	4928769	.	+	.	ID=gene4885;Name=yjgN;Dbxref=GeneID:7149201;gbkey=Gene;gene=yjgN;locus_tag=EC55989_4815
NC_011748.1	RefSeq	CDS	4927573	4928769	.	+	0	ID=cds4524;Name=YP_002405672.1;Parent=gene4885;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002405672.1,GeneID:7149201;gbkey=CDS;product=inner membrane protein;protein_id=YP_002405672.1;transl_table=11
NC_011748.1	RefSeq	gene	4928825	4931680	.	-	.	ID=gene4886;Name=valS;Dbxref=GeneID:7149202;gbkey=Gene;gene=valS;locus_tag=EC55989_4816
NC_011748.1	RefSeq	CDS	4928825	4931680	.	-	0	ID=cds4525;Name=YP_002405673.1;Parent=gene4886;Note=valine--tRNA ligase%3B ValRS%3B converts valine ATP and tRNA%28Val%29 to AMP PPi and valyl-tRNA%28Val%29%3B class-I aminoacyl-tRNA synthetase type 1 subfamily%3B has a posttransfer editing process to hydrolyze mischarged Thr-tRNA%28Val%29 which is done by the editing domain;Dbxref=Genbank:YP_002405673.1,GeneID:7149202;gbkey=CDS;product=valyl-tRNA synthetase;protein_id=YP_002405673.1;transl_table=11
NC_011748.1	RefSeq	gene	4931680	4932123	.	-	.	ID=gene4887;Name=holC;Dbxref=GeneID:7147946;gbkey=Gene;gene=holC;locus_tag=EC55989_4817
NC_011748.1	RefSeq	CDS	4931680	4932123	.	-	0	ID=cds4526;Name=YP_002405674.1;Parent=gene4887;Note=binds to single-strand binding %28SSB%29 protein and acts as a bridge between the DnaX clamp loader complex and the SSB;Dbxref=Genbank:YP_002405674.1,GeneID:7147946;gbkey=CDS;product=DNA polymerase III subunit chi;protein_id=YP_002405674.1;transl_table=11
NC_011748.1	RefSeq	gene	4932257	4933768	.	-	.	ID=gene4888;Name=pepA;Dbxref=GeneID:7146455;gbkey=Gene;gene=pepA;locus_tag=EC55989_4818
NC_011748.1	RefSeq	CDS	4932257	4933768	.	-	0	ID=cds4527;Name=YP_002405675.1;Parent=gene4888;Note=catalyzes the removal of N-terminal amino acids preferably leucine from various peptides;Dbxref=Genbank:YP_002405675.1,GeneID:7146455;gbkey=CDS;product=leucyl aminopeptidase;protein_id=YP_002405675.1;transl_table=11
NC_011748.1	RefSeq	gene	4934035	4935135	.	+	.	ID=gene4889;Name=yjgP;Dbxref=GeneID:7147130;gbkey=Gene;gene=yjgP;locus_tag=EC55989_4819
NC_011748.1	RefSeq	CDS	4934035	4935135	.	+	0	ID=cds4528;Name=YP_002405676.1;Parent=gene4889;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002405676.1,GeneID:7147130;gbkey=CDS;product=inner membrane protein;protein_id=YP_002405676.1;transl_table=11
NC_011748.1	RefSeq	gene	4935135	4936217	.	+	.	ID=gene4890;Name=yjgQ;Dbxref=GeneID:7149203;gbkey=Gene;gene=yjgQ;locus_tag=EC55989_4820
NC_011748.1	RefSeq	CDS	4935135	4936217	.	+	0	ID=cds4529;Name=YP_002405677.1;Parent=gene4890;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002405677.1,GeneID:7149203;gbkey=CDS;product=inner membrane protein;protein_id=YP_002405677.1;transl_table=11
NC_011748.1	RefSeq	gene	4936336	4937838	.	-	.	ID=gene4891;Name=yjgR;Dbxref=GeneID:7149204;gbkey=Gene;gene=yjgR;locus_tag=EC55989_4821
NC_011748.1	RefSeq	CDS	4936336	4937838	.	-	0	ID=cds4530;Name=YP_002405678.1;Parent=gene4891;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002405678.1,GeneID:7149204;gbkey=CDS;product=ATPase;protein_id=YP_002405678.1;transl_table=11
NC_011748.1	RefSeq	gene	4937916	4938914	.	-	.	ID=gene4892;Name=idnR;Dbxref=GeneID:7149205;gbkey=Gene;gene=idnR;locus_tag=EC55989_4822
NC_011748.1	RefSeq	CDS	4937916	4938914	.	-	0	ID=cds4531;Name=YP_002405679.1;Parent=gene4892;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 9119199%2C 98324983%2C 9658018%3B Product type r : regulator;Dbxref=Genbank:YP_002405679.1,GeneID:7149205;gbkey=CDS;product=DNA-binding transcriptional repressor%2C 5-gluconate-binding;protein_id=YP_002405679.1;transl_table=11
NC_011748.1	RefSeq	gene	4938981	4940300	.	-	.	ID=gene4893;Name=idnT;Dbxref=GeneID:7146543;gbkey=Gene;gene=idnT;locus_tag=EC55989_4823
NC_011748.1	RefSeq	CDS	4938981	4940300	.	-	0	ID=cds4532;Name=YP_002405680.1;Parent=gene4893;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 172599%2C 9119199%2C 93139975%2C 98324983%2C 9658018%3B Product type t : transporter;Dbxref=Genbank:YP_002405680.1,GeneID:7146543;gbkey=CDS;product=L-idonate and D-gluconate transporter;protein_id=YP_002405680.1;transl_table=11
NC_011748.1	RefSeq	gene	4940365	4941129	.	-	.	ID=gene4894;Name=idnO;Dbxref=GeneID:7146544;gbkey=Gene;gene=idnO;locus_tag=EC55989_4824
NC_011748.1	RefSeq	CDS	4940365	4941129	.	-	0	ID=cds4533;Name=YP_002405681.1;Parent=gene4894;Note=Involved in the nonphosphorylative%2C ketogenic oxidation of glucose and oxidizes gluconate to 5-ketogluconate;Dbxref=Genbank:YP_002405681.1,GeneID:7146544;gbkey=CDS;product=gluconate 5-dehydrogenase;protein_id=YP_002405681.1;transl_table=11
NC_011748.1	RefSeq	gene	4941153	4942184	.	-	.	ID=gene4895;Name=idnD;Dbxref=GeneID:7146542;gbkey=Gene;gene=idnD;locus_tag=EC55989_4825
NC_011748.1	RefSeq	CDS	4941153	4942184	.	-	0	ID=cds4534;Name=YP_002405682.1;Parent=gene4895;Note=NAD-binding;Dbxref=Genbank:YP_002405682.1,GeneID:7146542;gbkey=CDS;product=L-idonate 5-dehydrogenase;protein_id=YP_002405682.1;transl_table=11
NC_011748.1	RefSeq	gene	4942401	4942964	.	+	.	ID=gene4896;Name=idnK;Dbxref=GeneID:7146540;gbkey=Gene;gene=idnK;locus_tag=EC55989_4826
NC_011748.1	RefSeq	CDS	4942401	4942964	.	+	0	ID=cds4535;Name=YP_002405683.1;Parent=gene4896;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 87310381%2C 93139975%2C 98324983%2C 9658018%2C 14832279%3B Product type e : enzyme;Dbxref=Genbank:YP_002405683.1,GeneID:7146540;gbkey=CDS;product=D-gluconate kinase;protein_id=YP_002405683.1;transl_table=11
NC_011748.1	RefSeq	gene	4942968	4943987	.	-	.	ID=gene4897;Name=yjgB;Dbxref=GeneID:7146541;gbkey=Gene;gene=yjgB;locus_tag=EC55989_4827
NC_011748.1	RefSeq	CDS	4942968	4943987	.	-	0	ID=cds4536;Name=YP_002405684.1;Parent=gene4897;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 12147722%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002405684.1,GeneID:7146541;gbkey=CDS;product=alcohol dehydrogenase%2C Zn-dependent and NAD%28P%29-binding;protein_id=YP_002405684.1;transl_table=11
NC_011748.1	RefSeq	gene	4944062	4944268	.	-	.	ID=gene4898;Name=EC55989_4828;Dbxref=GeneID:7149192;gbkey=Gene;locus_tag=EC55989_4828
NC_011748.1	RefSeq	CDS	4944062	4944268	.	-	0	ID=cds4537;Name=YP_002405685.1;Parent=gene4898;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405685.1,GeneID:7149192;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405685.1;transl_table=11
NC_011748.1	RefSeq	gene	4944183	4944267	.	+	.	ID=gene4899;Name=EC55989_tRNA55;Dbxref=GeneID:7145160;gbkey=Gene;locus_tag=EC55989_tRNA55
NC_011748.1	RefSeq	tRNA	4944183	4944267	.	+	.	ID=rna215;Dbxref=GeneID:7145160;gbkey=tRNA;product=tRNA-Leu
NC_011748.1	RefSeq	exon	4944183	4944267	.	+	.	ID=id415;Parent=rna215;Dbxref=GeneID:7145160;gbkey=tRNA;product=tRNA-Leu
NC_011748.1	RefSeq	gene	4944529	4945719	.	+	.	ID=gene4900;Name=intB;Dbxref=GeneID:7145367;gbkey=Gene;gene=intB;locus_tag=EC55989_4829
NC_011748.1	RefSeq	CDS	4944529	4945719	.	+	0	ID=cds4538;Name=YP_002405686.1;Parent=gene4900;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002405686.1,GeneID:7145367;gbkey=CDS;product=integrase%3B KpLE2 phage-like element;protein_id=YP_002405686.1;transl_table=11
NC_011748.1	RefSeq	gene	4946043	4947542	.	-	.	ID=gene4901;Name=EC55989_4830;Dbxref=GeneID:7146608;gbkey=Gene;locus_tag=EC55989_4830
NC_011748.1	RefSeq	CDS	4946043	4947542	.	-	0	ID=cds4539;Name=YP_002405687.1;Parent=gene4901;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002405687.1,GeneID:7146608;gbkey=CDS;product=membrane-associated%2C metal-dependent hydrolase;protein_id=YP_002405687.1;transl_table=11
NC_011748.1	RefSeq	gene	4947716	4948507	.	-	.	ID=gene4902;Name=EC55989_4831;Dbxref=GeneID:7145161;gbkey=Gene;locus_tag=EC55989_4831
NC_011748.1	RefSeq	CDS	4947716	4948507	.	-	0	ID=cds4540;Name=YP_002405688.1;Parent=gene4902;Note=Evidence 2b : Function of strongly homologous gene%3B Product type f : factor;Dbxref=Genbank:YP_002405688.1,GeneID:7145161;gbkey=CDS;product=surface protein precursor;protein_id=YP_002405688.1;transl_table=11
NC_011748.1	RefSeq	gene	4949069	4950718	.	+	.	ID=gene4903;Name=EC55989_4832;Dbxref=GeneID:7145162;gbkey=Gene;locus_tag=EC55989_4832
NC_011748.1	RefSeq	CDS	4949069	4950718	.	+	0	ID=cds4541;Name=YP_002405689.1;Parent=gene4903;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405689.1,GeneID:7145162;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405689.1;transl_table=11
NC_011748.1	RefSeq	gene	4950723	4952048	.	+	.	ID=gene4904;Name=EC55989_4833;Dbxref=GeneID:7145163;gbkey=Gene;locus_tag=EC55989_4833
NC_011748.1	RefSeq	CDS	4950723	4952048	.	+	0	ID=cds4542;Name=YP_002405690.1;Parent=gene4904;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405690.1,GeneID:7145163;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405690.1;transl_table=11
NC_011748.1	RefSeq	gene	4952008	4957083	.	+	.	ID=gene4905;Name=EC55989_4834;Dbxref=GeneID:7145164;gbkey=Gene;locus_tag=EC55989_4834
NC_011748.1	RefSeq	CDS	4952008	4957083	.	+	0	ID=cds4543;Name=YP_002405691.1;Parent=gene4905;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405691.1,GeneID:7145164;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405691.1;transl_table=11
NC_011748.1	RefSeq	gene	4957121	4957639	.	+	.	ID=gene4906;Name=EC55989_4835;Dbxref=GeneID:7145165;gbkey=Gene;locus_tag=EC55989_4835
NC_011748.1	RefSeq	CDS	4957121	4957639	.	+	0	ID=cds4544;Name=YP_002405692.1;Parent=gene4906;Note=Evidence 5 : No homology to any previously reported sequences;Dbxref=Genbank:YP_002405692.1,GeneID:7145165;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405692.1;transl_table=11
NC_011748.1	RefSeq	gene	4957640	4957945	.	+	.	ID=gene4907;Name=EC55989_4836;Dbxref=GeneID:7145166;gbkey=Gene;locus_tag=EC55989_4836
NC_011748.1	RefSeq	CDS	4957640	4957945	.	+	0	ID=cds4545;Name=YP_002405693.1;Parent=gene4907;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405693.1,GeneID:7145166;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405693.1;transl_table=11
NC_011748.1	RefSeq	gene	4958207	4958800	.	+	.	ID=gene4908;Name=EC55989_4837;Dbxref=GeneID:7145167;gbkey=Gene;locus_tag=EC55989_4837
NC_011748.1	RefSeq	CDS	4958207	4958800	.	+	0	ID=cds4546;Name=YP_002405694.1;Parent=gene4908;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405694.1,GeneID:7145167;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405694.1;transl_table=11
NC_011748.1	RefSeq	gene	4958859	4959215	.	-	.	ID=gene4909;Name=EC55989_4838;Dbxref=GeneID:7145168;gbkey=Gene;locus_tag=EC55989_4838
NC_011748.1	RefSeq	CDS	4958859	4959215	.	-	0	ID=cds4547;Name=YP_002405695.1;Parent=gene4909;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 16102010%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002405695.1,GeneID:7145168;gbkey=CDS;product=DNA thiolation protein%3B phage protein;protein_id=YP_002405695.1;transl_table=11
NC_011748.1	RefSeq	gene	4959215	4961263	.	-	.	ID=gene4910;Name=EC55989_4839;Dbxref=GeneID:7145169;gbkey=Gene;locus_tag=EC55989_4839
NC_011748.1	RefSeq	CDS	4959215	4961263	.	-	0	ID=cds4548;Name=YP_002405696.1;Parent=gene4910;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 16102010%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002405696.1,GeneID:7145169;gbkey=CDS;product=ATPase involved in DNA thiolation;protein_id=YP_002405696.1;transl_table=11
NC_011748.1	RefSeq	gene	4961205	4962839	.	-	.	ID=gene4911;Name=EC55989_4840;Dbxref=GeneID:7145170;gbkey=Gene;locus_tag=EC55989_4840
NC_011748.1	RefSeq	CDS	4961205	4962839	.	-	0	ID=cds4549;Name=YP_002405697.1;Parent=gene4911;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 16102010%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002405697.1,GeneID:7145170;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405697.1;transl_table=11
NC_011748.1	RefSeq	gene	4962836	4963921	.	-	.	ID=gene4912;Name=EC55989_4841;Dbxref=GeneID:7145171;gbkey=Gene;locus_tag=EC55989_4841
NC_011748.1	RefSeq	CDS	4962836	4963921	.	-	0	ID=cds4550;Name=YP_002405698.1;Parent=gene4912;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 16102010%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002405698.1,GeneID:7145171;gbkey=CDS;product=DNA thiolation protein%3B phage protein;protein_id=YP_002405698.1;transl_table=11
NC_011748.1	RefSeq	gene	4964136	4964288	.	-	.	ID=gene4913;Name=EC55989_4842;Dbxref=GeneID:7145172;gbkey=Gene;locus_tag=EC55989_4842
NC_011748.1	RefSeq	CDS	4964136	4964288	.	-	0	ID=cds4551;Name=YP_002405699.1;Parent=gene4913;Note=Evidence 5 : No homology to any previously reported sequences;Dbxref=Genbank:YP_002405699.1,GeneID:7145172;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405699.1;transl_table=11
NC_011748.1	RefSeq	gene	4964384	4964557	.	+	.	ID=gene4914;Name=EC55989_4843;Dbxref=GeneID:7145173;gbkey=Gene;locus_tag=EC55989_4843
NC_011748.1	RefSeq	CDS	4964384	4964557	.	+	0	ID=cds4552;Name=YP_002405700.1;Parent=gene4914;Note=Evidence 5 : No homology to any previously reported sequences;Dbxref=Genbank:YP_002405700.1,GeneID:7145173;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405700.1;transl_table=11
NC_011748.1	RefSeq	gene	4964554	4964898	.	+	.	ID=gene4915;Name=EC55989_4844;Dbxref=GeneID:7145174;gbkey=Gene;locus_tag=EC55989_4844
NC_011748.1	RefSeq	CDS	4964554	4964898	.	+	0	ID=cds4553;Name=YP_002405701.1;Parent=gene4915;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pr :  regulator;Dbxref=Genbank:YP_002405701.1,GeneID:7145174;gbkey=CDS;product=conjugation inhibition protein%2C immunity protein;protein_id=YP_002405701.1;transl_table=11
NC_011748.1	RefSeq	gene	4964917	4965516	.	-	.	ID=gene4916;Name=EC55989_4845;Dbxref=GeneID:7145175;gbkey=Gene;locus_tag=EC55989_4845
NC_011748.1	RefSeq	CDS	4964917	4965516	.	-	0	ID=cds4554;Name=YP_002405702.1;Parent=gene4916;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405702.1,GeneID:7145175;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405702.1;transl_table=11
NC_011748.1	RefSeq	gene	4965553	4965711	.	-	.	ID=gene4917;Name=EC55989_4846;Dbxref=GeneID:7145176;gbkey=Gene;locus_tag=EC55989_4846
NC_011748.1	RefSeq	CDS	4965553	4965711	.	-	0	ID=cds4555;Name=YP_002405703.1;Parent=gene4917;Dbxref=Genbank:YP_002405703.1,GeneID:7145176;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405703.1;transl_table=11
NC_011748.1	RefSeq	gene	4965708	4965944	.	-	.	ID=gene4918;Name=EC55989_4847;Dbxref=GeneID:7145177;gbkey=Gene;locus_tag=EC55989_4847
NC_011748.1	RefSeq	CDS	4965708	4965944	.	-	0	ID=cds4556;Name=YP_002405704.1;Parent=gene4918;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405704.1,GeneID:7145177;gbkey=CDS;product=phage regulatory protein;protein_id=YP_002405704.1;transl_table=11
NC_011748.1	RefSeq	gene	4966013	4966720	.	-	.	ID=gene4919;Name=EC55989_4848;Dbxref=GeneID:7145178;gbkey=Gene;locus_tag=EC55989_4848
NC_011748.1	RefSeq	CDS	4966013	4966720	.	-	0	ID=cds4557;Name=YP_002405705.1;Parent=gene4919;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405705.1,GeneID:7145178;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405705.1;transl_table=11
NC_011748.1	RefSeq	gene	4966835	4967302	.	-	.	ID=gene4920;Name=EC55989_4849;Dbxref=GeneID:7145179;gbkey=Gene;locus_tag=EC55989_4849
NC_011748.1	RefSeq	CDS	4966835	4967302	.	-	0	ID=cds4558;Name=YP_002405706.1;Parent=gene4920;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405706.1,GeneID:7145179;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405706.1;transl_table=11
NC_011748.1	RefSeq	gene	4967357	4967426	.	-	.	ID=gene4921;Name=RNAout;Dbxref=GeneID:7145180;gbkey=Gene;gene=RNAout;locus_tag=EC55989_misc_RNA_105
NC_011748.1	RefSeq	transcript	4967357	4967426	.	-	.	ID=rna216;Parent=gene4921;Note=Evidence 1c : Function experimentally demonstrated in the studied genus%3B PubMedId : 1691096%3B Product type n : RNA;Dbxref=GeneID:7145180;gbkey=misc_RNA;product=RNAout
NC_011748.1	RefSeq	exon	4967357	4967426	.	-	.	ID=id416;Parent=rna216;Note=Evidence 1c : Function experimentally demonstrated in the studied genus%3B PubMedId : 1691096%3B Product type n : RNA;Dbxref=GeneID:7145180;gbkey=misc_RNA;product=RNAout
NC_011748.1	RefSeq	gene	4967418	4968626	.	+	.	ID=gene4922;Name=EC55989_4850;Dbxref=GeneID:7147438;gbkey=Gene;locus_tag=EC55989_4850
NC_011748.1	RefSeq	CDS	4967418	4968626	.	+	0	ID=cds4559;Name=YP_002405707.1;Parent=gene4922;Note=Evidence 2b : Function of strongly homologous gene%3B PubMedId : 10781570%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002405707.1,GeneID:7147438;gbkey=CDS;product=transposase%2C IS4 family%2C IS10L;protein_id=YP_002405707.1;transl_table=11
NC_011748.1	RefSeq	gene	4968992	4969273	.	-	.	ID=gene4923;Name=EC55989_4851;Dbxref=GeneID:7145181;gbkey=Gene;locus_tag=EC55989_4851
NC_011748.1	RefSeq	CDS	4968992	4969273	.	-	0	ID=cds4560;Name=YP_002405708.1;Parent=gene4923;Dbxref=Genbank:YP_002405708.1,GeneID:7145181;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405708.1;transl_table=11
NC_011748.1	RefSeq	gene	4969248	4970456	.	-	.	ID=gene4924;Name=EC55989_4852;Dbxref=GeneID:7145182;gbkey=Gene;locus_tag=EC55989_4852
NC_011748.1	RefSeq	CDS	4969248	4970456	.	-	0	ID=cds4561;Name=YP_002405709.1;Parent=gene4924;Note=Evidence 2b : Function of strongly homologous gene%3B PubMedId : 10781570%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002405709.1,GeneID:7145182;gbkey=CDS;product=transposase%2C IS4 family%2C IS10L;protein_id=YP_002405709.1;transl_table=11
NC_011748.1	RefSeq	gene	4970396	4971535	.	-	.	ID=gene4925;Name=EC55989_4853;Dbxref=GeneID:7145183;gbkey=Gene;locus_tag=EC55989_4853
NC_011748.1	RefSeq	CDS	4970396	4971535	.	-	0	ID=cds4562;Name=YP_002405710.1;Parent=gene4925;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405710.1,GeneID:7145183;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405710.1;transl_table=11
NC_011748.1	RefSeq	gene	4970448	4970517	.	+	.	ID=gene4926;Name=RNAout;Dbxref=GeneID:7145184;gbkey=Gene;gene=RNAout;locus_tag=EC55989_misc_RNA_106
NC_011748.1	RefSeq	transcript	4970448	4970517	.	+	.	ID=rna217;Parent=gene4926;Note=Evidence 1c : Function experimentally demonstrated in the studied genus%3B PubMedId : 1691096%3B Product type n : RNA;Dbxref=GeneID:7145184;gbkey=misc_RNA;product=RNAout
NC_011748.1	RefSeq	exon	4970448	4970517	.	+	.	ID=id417;Parent=rna217;Note=Evidence 1c : Function experimentally demonstrated in the studied genus%3B PubMedId : 1691096%3B Product type n : RNA;Dbxref=GeneID:7145184;gbkey=misc_RNA;product=RNAout
NC_011748.1	RefSeq	gene	4971979	4972299	.	+	.	ID=gene4927;Name=EC55989_4854;Dbxref=GeneID:7147439;gbkey=Gene;locus_tag=EC55989_4854
NC_011748.1	RefSeq	CDS	4971979	4972299	.	+	0	ID=cds4563;Name=YP_002405711.1;Parent=gene4927;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002405711.1,GeneID:7147439;gbkey=CDS;product=monooxygenase;protein_id=YP_002405711.1;transl_table=11
NC_011748.1	RefSeq	gene	4972181	4972678	.	+	.	ID=gene4928;Name=EC55989_4855;Dbxref=GeneID:7145185;gbkey=Gene;locus_tag=EC55989_4855
NC_011748.1	RefSeq	CDS	4972181	4972678	.	+	0	ID=cds4564;Name=YP_002405712.1;Parent=gene4928;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405712.1,GeneID:7145185;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405712.1;transl_table=11
NC_011748.1	RefSeq	gene	4972686	4973372	.	+	.	ID=gene4929;Name=EC55989_4856;Dbxref=GeneID:7145186;gbkey=Gene;locus_tag=EC55989_4856
NC_011748.1	RefSeq	CDS	4972686	4973372	.	+	0	ID=cds4565;Name=YP_002405713.1;Parent=gene4929;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pr :  regulator;Dbxref=Genbank:YP_002405713.1,GeneID:7145186;gbkey=CDS;product=ArsR family transcriptional regulator;protein_id=YP_002405713.1;transl_table=11
NC_011748.1	RefSeq	gene	4973350	4973976	.	-	.	ID=gene4930;Name=EC55989_4857;Dbxref=GeneID:7145187;gbkey=Gene;locus_tag=EC55989_4857
NC_011748.1	RefSeq	CDS	4973350	4973976	.	-	0	ID=cds4566;Name=YP_002405714.1;Parent=gene4930;Note=Evidence 2b : Function of strongly homologous gene%3B Product type r : regulator;Dbxref=Genbank:YP_002405714.1,GeneID:7145187;gbkey=CDS;product=tetracycline repressor protein TetR;protein_id=YP_002405714.1;transl_table=11
NC_011748.1	RefSeq	gene	4974007	4975260	.	+	.	ID=gene4931;Name=EC55989_4858;Dbxref=GeneID:7145188;gbkey=Gene;locus_tag=EC55989_4858
NC_011748.1	RefSeq	CDS	4974007	4975260	.	+	0	ID=cds4567;Name=YP_002405715.1;Parent=gene4931;Note=Evidence 2b : Function of strongly homologous gene%3B Product type pt :  transporter;Dbxref=Genbank:YP_002405715.1,GeneID:7145188;gbkey=CDS;product=Tetracycline resistance protein%2C class B %28TETA%28B%29 %29 %28Metal-tetracycline%2FH%28%2B%29 antiporter%29;protein_id=YP_002405715.1;transl_table=11
NC_011748.1	RefSeq	gene	4975373	4976041	.	-	.	ID=gene4932;Name=EC55989_4859;Dbxref=GeneID:7145189;gbkey=Gene;locus_tag=EC55989_4859
NC_011748.1	RefSeq	CDS	4975373	4976041	.	-	0	ID=cds4568;Name=YP_002405716.1;Parent=gene4932;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pr :  regulator;Dbxref=Genbank:YP_002405716.1,GeneID:7145189;gbkey=CDS;product=Transcriptional regulator;protein_id=YP_002405716.1;transl_table=11
NC_011748.1	RefSeq	gene	4976054	4976470	.	+	.	ID=gene4933;Name=EC55989_4860;Dbxref=GeneID:7145190;gbkey=Gene;locus_tag=EC55989_4860
NC_011748.1	RefSeq	CDS	4976054	4976470	.	+	0	ID=cds4569;Name=YP_002405717.1;Parent=gene4933;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pr :  regulator;Dbxref=Genbank:YP_002405717.1,GeneID:7145190;gbkey=CDS;product=operon control protein;protein_id=YP_002405717.1;transl_table=11
NC_011748.1	RefSeq	gene	4976480	4977688	.	-	.	ID=gene4934;Name=EC55989_4861;Dbxref=GeneID:7145191;gbkey=Gene;locus_tag=EC55989_4861
NC_011748.1	RefSeq	CDS	4976480	4977688	.	-	0	ID=cds4570;Name=YP_002405718.1;Parent=gene4934;Note=Evidence 2b : Function of strongly homologous gene%3B PubMedId : 10781570%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002405718.1,GeneID:7145191;gbkey=CDS;product=transposase%2C IS4 family%2C IS10L;protein_id=YP_002405718.1;transl_table=11
NC_011748.1	RefSeq	gene	4977689	4977750	.	+	.	ID=gene4935;Name=EC55989_misc_RNA_107;Dbxref=GeneID:7145192;gbkey=Gene;locus_tag=EC55989_misc_RNA_107
NC_011748.1	RefSeq	transcript	4977689	4977750	.	+	.	ID=rna218;Parent=gene4935;Dbxref=GeneID:7145192;gbkey=misc_RNA;product=RNA-OUT
NC_011748.1	RefSeq	exon	4977689	4977750	.	+	.	ID=id418;Parent=rna218;Dbxref=GeneID:7145192;gbkey=misc_RNA;product=RNA-OUT
NC_011748.1	RefSeq	gene	4979387	4980142	.	-	.	ID=gene4936;Name=EC55989_4862;Dbxref=GeneID:7145299;gbkey=Gene;locus_tag=EC55989_4862
NC_011748.1	RefSeq	CDS	4979387	4980142	.	-	0	ID=cds4571;Name=YP_002405719.1;Parent=gene4936;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405719.1,GeneID:7145299;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405719.1;transl_table=11
NC_011748.1	RefSeq	gene	4980287	4980556	.	-	.	ID=gene4937;Name=EC55989_4863;Dbxref=GeneID:7145193;gbkey=Gene;locus_tag=EC55989_4863
NC_011748.1	RefSeq	CDS	4980287	4980556	.	-	0	ID=cds4572;Name=YP_002405720.1;Parent=gene4937;Note=Evidence 5 : No homology to any previously reported sequences;Dbxref=Genbank:YP_002405720.1,GeneID:7145193;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405720.1;transl_table=11
NC_011748.1	RefSeq	gene	4980643	4980951	.	+	.	ID=gene4938;Name=insE;Dbxref=GeneID:7145194;gbkey=Gene;gene=insE;locus_tag=EC55989_4864
NC_011748.1	RefSeq	CDS	4980643	4980951	.	+	0	ID=cds4573;Name=YP_002405721.1;Parent=gene4938;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002405721.1,GeneID:7145194;gbkey=CDS;product=IS3 element protein InsE;protein_id=YP_002405721.1;transl_table=11
NC_011748.1	RefSeq	gene	4980948	4981814	.	+	.	ID=gene4939;Name=insF;Dbxref=GeneID:7146593;gbkey=Gene;gene=insF;locus_tag=EC55989_4865
NC_011748.1	RefSeq	CDS	4980948	4981814	.	+	0	ID=cds4574;Name=YP_002405722.1;Parent=gene4939;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002405722.1,GeneID:7146593;gbkey=CDS;product=IS3 element protein InsF;protein_id=YP_002405722.1;transl_table=11
NC_011748.1	RefSeq	gene	4981951	4982742	.	-	.	ID=gene4940;Name=EC55989_4866;Dbxref=GeneID:7146595;gbkey=Gene;locus_tag=EC55989_4866
NC_011748.1	RefSeq	CDS	4981951	4982742	.	-	0	ID=cds4575;Name=YP_002405723.1;Parent=gene4940;Note=Evidence 5 : No homology to any previously reported sequences;Dbxref=Genbank:YP_002405723.1,GeneID:7146595;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405723.1;transl_table=11
NC_011748.1	RefSeq	gene	4982813	4983634	.	-	.	ID=gene4941;Name=EC55989_4867;Dbxref=GeneID:7145195;gbkey=Gene;locus_tag=EC55989_4867
NC_011748.1	RefSeq	CDS	4982813	4983634	.	-	0	ID=cds4576;Name=YP_002405724.1;Parent=gene4941;Note=Evidence 5 : No homology to any previously reported sequences;Dbxref=Genbank:YP_002405724.1,GeneID:7145195;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405724.1;transl_table=11
NC_011748.1	RefSeq	gene	4983672	4984373	.	-	.	ID=gene4942;Name=EC55989_4868;Dbxref=GeneID:7145196;gbkey=Gene;locus_tag=EC55989_4868
NC_011748.1	RefSeq	CDS	4983672	4984373	.	-	0	ID=cds4577;Name=YP_002405725.1;Parent=gene4942;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405725.1,GeneID:7145196;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405725.1;transl_table=11
NC_011748.1	RefSeq	gene	4984370	4984945	.	-	.	ID=gene4943;Name=EC55989_4869;Dbxref=GeneID:7145197;gbkey=Gene;locus_tag=EC55989_4869
NC_011748.1	RefSeq	CDS	4984370	4984945	.	-	0	ID=cds4578;Name=YP_002405726.1;Parent=gene4943;Note=Evidence 5 : No homology to any previously reported sequences;Dbxref=Genbank:YP_002405726.1,GeneID:7145197;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405726.1;transl_table=11
NC_011748.1	RefSeq	gene	4985107	4985910	.	-	.	ID=gene4944;Name=EC55989_4870;Dbxref=GeneID:7145198;gbkey=Gene;locus_tag=EC55989_4870
NC_011748.1	RefSeq	CDS	4985107	4985910	.	-	0	ID=cds4579;Name=YP_002405727.1;Parent=gene4944;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405727.1,GeneID:7145198;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405727.1;transl_table=11
NC_011748.1	RefSeq	gene	4985699	4986049	.	+	.	ID=gene4945;Name=EC55989_4871;Dbxref=GeneID:7145199;gbkey=Gene;locus_tag=EC55989_4871
NC_011748.1	RefSeq	CDS	4985699	4986049	.	+	0	ID=cds4580;Name=YP_002405728.1;Parent=gene4945;Note=Evidence 5 : No homology to any previously reported sequences;Dbxref=Genbank:YP_002405728.1,GeneID:7145199;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405728.1;transl_table=11
NC_011748.1	RefSeq	gene	4986234	4986908	.	+	.	ID=gene4946;Name=EC55989_4872;Dbxref=GeneID:7145200;gbkey=Gene;locus_tag=EC55989_4872
NC_011748.1	RefSeq	CDS	4986234	4986908	.	+	0	ID=cds4581;Name=YP_002405729.1;Parent=gene4946;Note=Evidence 5 : No homology to any previously reported sequences;Dbxref=Genbank:YP_002405729.1,GeneID:7145200;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405729.1;transl_table=11
NC_011748.1	RefSeq	gene	4987187	4987963	.	-	.	ID=gene4947;Name=EC55989_4873;Dbxref=GeneID:7145201;gbkey=Gene;locus_tag=EC55989_4873
NC_011748.1	RefSeq	CDS	4987187	4987963	.	-	0	ID=cds4582;Name=YP_002405730.1;Parent=gene4947;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405730.1,GeneID:7145201;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405730.1;transl_table=11
NC_011748.1	RefSeq	gene	4987966	4988475	.	-	.	ID=gene4948;Name=EC55989_4874;Dbxref=GeneID:7145202;gbkey=Gene;locus_tag=EC55989_4874
NC_011748.1	RefSeq	CDS	4987966	4988475	.	-	0	ID=cds4583;Name=YP_002405731.1;Parent=gene4948;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405731.1,GeneID:7145202;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405731.1;transl_table=11
NC_011748.1	RefSeq	gene	4988634	4989155	.	+	.	ID=gene4949;Name=EC55989_4875;Dbxref=GeneID:7145203;gbkey=Gene;locus_tag=EC55989_4875
NC_011748.1	RefSeq	CDS	4988634	4989155	.	+	0	ID=cds4584;Name=YP_002405732.1;Parent=gene4949;Note=Evidence 5 : No homology to any previously reported sequences;Dbxref=Genbank:YP_002405732.1,GeneID:7145203;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405732.1;transl_table=11
NC_011748.1	RefSeq	gene	4989073	4989594	.	+	.	ID=gene4950;Name=EC55989_4876;Dbxref=GeneID:7145204;gbkey=Gene;locus_tag=EC55989_4876
NC_011748.1	RefSeq	CDS	4989073	4989594	.	+	0	ID=cds4585;Name=YP_002405733.1;Parent=gene4950;Note=Evidence 5 : No homology to any previously reported sequences;Dbxref=Genbank:YP_002405733.1,GeneID:7145204;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405733.1;transl_table=11
NC_011748.1	RefSeq	gene	4989608	4990630	.	+	.	ID=gene4951;Name=EC55989_4877;Dbxref=GeneID:7145205;gbkey=Gene;locus_tag=EC55989_4877
NC_011748.1	RefSeq	CDS	4989608	4990630	.	+	0	ID=cds4586;Name=YP_002405734.1;Parent=gene4951;Note=Evidence 2b : Function of strongly homologous gene%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002405734.1,GeneID:7145205;gbkey=CDS;product=transposase ORF A%2C IS100;protein_id=YP_002405734.1;transl_table=11
NC_011748.1	RefSeq	gene	4990627	4991409	.	+	.	ID=gene4952;Name=EC55989_4878;Dbxref=GeneID:7145206;gbkey=Gene;locus_tag=EC55989_4878
NC_011748.1	RefSeq	CDS	4990627	4991409	.	+	0	ID=cds4587;Name=YP_002405735.1;Parent=gene4952;Note=Evidence 2b : Function of strongly homologous gene%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002405735.1,GeneID:7145206;gbkey=CDS;product=transposase%2FIS protein;protein_id=YP_002405735.1;transl_table=11
NC_011748.1	RefSeq	gene	4991534	4991707	.	-	.	ID=gene4953;Name=EC55989_4879;Dbxref=GeneID:7145207;gbkey=Gene;locus_tag=EC55989_4879
NC_011748.1	RefSeq	CDS	4991534	4991707	.	-	0	ID=cds4588;Name=YP_002405736.1;Parent=gene4953;Note=Evidence 5 : No homology to any previously reported sequences;Dbxref=Genbank:YP_002405736.1,GeneID:7145207;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405736.1;transl_table=11
NC_011748.1	RefSeq	gene	4991625	4992356	.	-	.	ID=gene4954;Name=EC55989_4880;Dbxref=GeneID:7145208;gbkey=Gene;locus_tag=EC55989_4880
NC_011748.1	RefSeq	CDS	4991625	4992356	.	-	0	ID=cds4589;Name=YP_002405737.1;Parent=gene4954;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405737.1,GeneID:7145208;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405737.1;transl_table=11
NC_011748.1	RefSeq	gene	4992698	4992886	.	-	.	ID=gene4955;Name=EC55989_4881;Dbxref=GeneID:7145209;gbkey=Gene;locus_tag=EC55989_4881
NC_011748.1	RefSeq	CDS	4992698	4992886	.	-	0	ID=cds4590;Name=YP_002405738.1;Parent=gene4955;Note=Evidence 5 : No homology to any previously reported sequences;Dbxref=Genbank:YP_002405738.1,GeneID:7145209;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405738.1;transl_table=11
NC_011748.1	RefSeq	gene	4993026	4993556	.	+	.	ID=gene4956;Name=EC55989_4882;Dbxref=GeneID:7145210;gbkey=Gene;locus_tag=EC55989_4882
NC_011748.1	RefSeq	CDS	4993026	4993556	.	+	0	ID=cds4591;Name=YP_002405739.1;Parent=gene4956;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405739.1,GeneID:7145210;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405739.1;transl_table=11
NC_011748.1	RefSeq	gene	4994306	4994485	.	-	.	ID=gene4957;Name=EC55989_4883;Dbxref=GeneID:7145211;gbkey=Gene;locus_tag=EC55989_4883
NC_011748.1	RefSeq	CDS	4994306	4994485	.	-	0	ID=cds4592;Name=YP_002405740.1;Parent=gene4957;Note=Evidence 5 : No homology to any previously reported sequences;Dbxref=Genbank:YP_002405740.1,GeneID:7145211;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405740.1;transl_table=11
NC_011748.1	RefSeq	gene	4995161	4996030	.	+	.	ID=gene4958;Name=EC55989_4884;Dbxref=GeneID:7145212;gbkey=Gene;locus_tag=EC55989_4884
NC_011748.1	RefSeq	CDS	4995161	4996030	.	+	0	ID=cds4593;Name=YP_002405741.1;Parent=gene4958;Note=Evidence 5 : No homology to any previously reported sequences;Dbxref=Genbank:YP_002405741.1,GeneID:7145212;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405741.1;transl_table=11
NC_011748.1	RefSeq	gene	4996027	4996989	.	-	.	ID=gene4959;Name=EC55989_4885;Dbxref=GeneID:7145213;gbkey=Gene;locus_tag=EC55989_4885
NC_011748.1	RefSeq	CDS	4996027	4996989	.	-	0	ID=cds4594;Name=YP_002405742.1;Parent=gene4959;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405742.1,GeneID:7145213;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405742.1;transl_table=11
NC_011748.1	RefSeq	gene	4997095	4997979	.	+	.	ID=gene4960;Name=EC55989_4886;Dbxref=GeneID:7145214;gbkey=Gene;locus_tag=EC55989_4886
NC_011748.1	RefSeq	CDS	4997095	4997979	.	+	0	ID=cds4595;Name=YP_002405743.1;Parent=gene4960;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002405743.1,GeneID:7145214;gbkey=CDS;product=GTP-binding protein;protein_id=YP_002405743.1;transl_table=11
NC_011748.1	RefSeq	gene	4998182	4998862	.	+	.	ID=gene4961;Name=yfjR;Dbxref=GeneID:7145215;gbkey=Gene;gene=yfjR;locus_tag=EC55989_4887
NC_011748.1	RefSeq	CDS	4998182	4998862	.	+	0	ID=cds4596;Name=YP_002405744.1;Parent=gene4961;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pr :  regulator;Dbxref=Genbank:YP_002405744.1,GeneID:7145215;gbkey=CDS;product=HTH-type transcriptional regulator;protein_id=YP_002405744.1;transl_table=11
NC_011748.1	RefSeq	gene	4998905	4999687	.	+	.	ID=gene4962;Name=EC55989_4888;Dbxref=GeneID:7148787;gbkey=Gene;locus_tag=EC55989_4888
NC_011748.1	RefSeq	CDS	4998905	4999687	.	+	0	ID=cds4597;Name=YP_002405745.1;Parent=gene4962;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405745.1,GeneID:7148787;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405745.1;transl_table=11
NC_011748.1	RefSeq	gene	4999693	4999926	.	+	.	ID=gene4963;Name=EC55989_4889;Dbxref=GeneID:7145216;gbkey=Gene;locus_tag=EC55989_4889
NC_011748.1	RefSeq	CDS	4999693	4999926	.	+	0	ID=cds4598;Name=YP_002405746.1;Parent=gene4963;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405746.1,GeneID:7145216;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405746.1;transl_table=11
NC_011748.1	RefSeq	gene	5000016	5000834	.	+	.	ID=gene4964;Name=EC55989_4890;Dbxref=GeneID:7145217;gbkey=Gene;locus_tag=EC55989_4890
NC_011748.1	RefSeq	CDS	5000016	5000834	.	+	0	ID=cds4599;Name=YP_002405747.1;Parent=gene4964;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405747.1,GeneID:7145217;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405747.1;transl_table=11
NC_011748.1	RefSeq	gene	5000926	5001411	.	+	.	ID=gene4965;Name=EC55989_4891;Dbxref=GeneID:7145218;gbkey=Gene;locus_tag=EC55989_4891
NC_011748.1	RefSeq	CDS	5000926	5001411	.	+	0	ID=cds4600;Name=YP_002405748.1;Parent=gene4965;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405748.1,GeneID:7145218;gbkey=CDS;product=antirestriction protein;protein_id=YP_002405748.1;transl_table=11
NC_011748.1	RefSeq	gene	5001456	5001902	.	+	.	ID=gene4966;Name=yeeS;Dbxref=GeneID:7145219;gbkey=Gene;gene=yeeS;locus_tag=EC55989_4892
NC_011748.1	RefSeq	CDS	5001456	5001902	.	+	0	ID=cds4601;Name=YP_002405749.1;Parent=gene4966;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 11053371%3B Product type pf :  factor;Dbxref=Genbank:YP_002405749.1,GeneID:7145219;gbkey=CDS;product=DNA repair protein%3B CP4-44 prophage;protein_id=YP_002405749.1;transl_table=11
NC_011748.1	RefSeq	gene	5001989	5002210	.	+	.	ID=gene4967;Name=yeeT;Dbxref=GeneID:7148607;gbkey=Gene;gene=yeeT;locus_tag=EC55989_4893
NC_011748.1	RefSeq	CDS	5001989	5002210	.	+	0	ID=cds4602;Name=YP_002405750.1;Parent=gene4967;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002405750.1,GeneID:7148607;gbkey=CDS;product=CP4-44 prophage;protein_id=YP_002405750.1;transl_table=11
NC_011748.1	RefSeq	gene	5002290	5002658	.	+	.	ID=gene4968;Name=yeeU;Dbxref=GeneID:7148611;gbkey=Gene;gene=yeeU;locus_tag=EC55989_4894
NC_011748.1	RefSeq	CDS	5002290	5002658	.	+	0	ID=cds4603;Name=YP_002405751.1;Parent=gene4968;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 14594833%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002405751.1,GeneID:7148611;gbkey=CDS;product=antitoxin of the YeeV-YeeU toxin-antitoxin system%3B CP4-44 prophage;protein_id=YP_002405751.1;transl_table=11
NC_011748.1	RefSeq	gene	5002607	5003125	.	+	.	ID=gene4969;Name=EC55989_4895;Dbxref=GeneID:7148615;gbkey=Gene;locus_tag=EC55989_4895
NC_011748.1	RefSeq	CDS	5002607	5003125	.	+	0	ID=cds4604;Name=YP_002405752.1;Parent=gene4969;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405752.1,GeneID:7148615;gbkey=CDS;product=phage protein;protein_id=YP_002405752.1;transl_table=11
NC_011748.1	RefSeq	gene	5003122	5003610	.	+	.	ID=gene4970;Name=yeeW;Dbxref=GeneID:7145220;gbkey=Gene;gene=yeeW;locus_tag=EC55989_4896
NC_011748.1	RefSeq	CDS	5003122	5003610	.	+	0	ID=cds4605;Name=YP_002405753.1;Parent=gene4970;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405753.1,GeneID:7145220;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405753.1;transl_table=11
NC_011748.1	RefSeq	gene	5003258	5003827	.	+	.	ID=gene4971;Name=EC55989_4897;Dbxref=GeneID:7148622;gbkey=Gene;locus_tag=EC55989_4897
NC_011748.1	RefSeq	CDS	5003258	5003827	.	+	0	ID=cds4606;Name=YP_002405754.1;Parent=gene4971;Note=Evidence 6 : Doubtful CDS;Dbxref=Genbank:YP_002405754.1,GeneID:7148622;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405754.1;transl_table=11
NC_011748.1	RefSeq	gene	5003912	5004058	.	+	.	ID=gene4972;Name=EC55989_4898;Dbxref=GeneID:7145221;gbkey=Gene;locus_tag=EC55989_4898
NC_011748.1	RefSeq	CDS	5003912	5004058	.	+	0	ID=cds4607;Name=YP_002405755.1;Parent=gene4972;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405755.1,GeneID:7145221;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405755.1;transl_table=11
NC_011748.1	RefSeq	gene	5004471	5005478	.	-	.	ID=gene4973;Name=EC55989_4899;Dbxref=GeneID:7145222;gbkey=Gene;locus_tag=EC55989_4899
NC_011748.1	RefSeq	CDS	5004471	5005478	.	-	0	ID=cds4608;Name=YP_002405756.1;Parent=gene4973;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405756.1,GeneID:7145222;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405756.1;transl_table=11
NC_011748.1	RefSeq	gene	5005387	5007006	.	-	.	ID=gene4974;Name=EC55989_4900;Dbxref=GeneID:7145223;gbkey=Gene;locus_tag=EC55989_4900
NC_011748.1	RefSeq	CDS	5005387	5007006	.	-	0	ID=cds4609;Name=YP_002405757.1;Parent=gene4974;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405757.1,GeneID:7145223;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405757.1;transl_table=11
NC_011748.1	RefSeq	gene	5007016	5008350	.	-	.	ID=gene4975;Name=EC55989_4901;Dbxref=GeneID:7145224;gbkey=Gene;locus_tag=EC55989_4901
NC_011748.1	RefSeq	CDS	5007016	5008350	.	-	0	ID=cds4610;Name=YP_002405758.1;Parent=gene4975;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405758.1,GeneID:7145224;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405758.1;transl_table=11
NC_011748.1	RefSeq	gene	5008307	5008633	.	-	.	ID=gene4976;Name=EC55989_4902;Dbxref=GeneID:7145225;gbkey=Gene;locus_tag=EC55989_4902
NC_011748.1	RefSeq	CDS	5008307	5008633	.	-	0	ID=cds4611;Name=YP_002405759.1;Parent=gene4976;Note=Evidence 5 : No homology to any previously reported sequences;Dbxref=Genbank:YP_002405759.1,GeneID:7145225;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405759.1;transl_table=11
NC_011748.1	RefSeq	gene	5008968	5009840	.	-	.	ID=gene4977;Name=EC55989_4903;Dbxref=GeneID:7145226;gbkey=Gene;locus_tag=EC55989_4903
NC_011748.1	RefSeq	CDS	5008968	5009840	.	-	0	ID=cds4612;Name=YP_002405760.1;Parent=gene4977;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405760.1,GeneID:7145226;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405760.1;transl_table=11
NC_011748.1	RefSeq	gene	5010085	5010465	.	-	.	ID=gene4978;Name=EC55989_4904;Dbxref=GeneID:7145227;gbkey=Gene;locus_tag=EC55989_4904
NC_011748.1	RefSeq	CDS	5010085	5010465	.	-	0	ID=cds4613;Name=YP_002405761.1;Parent=gene4978;Note=Evidence 6 : Doubtful CDS;Dbxref=Genbank:YP_002405761.1,GeneID:7145227;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405761.1;transl_table=11
NC_011748.1	RefSeq	gene	5010519	5011022	.	-	.	ID=gene4979;Name=EC55989_4905;Dbxref=GeneID:7145228;gbkey=Gene;locus_tag=EC55989_4905
NC_011748.1	RefSeq	CDS	5010519	5011022	.	-	0	ID=cds4614;Name=YP_002405762.1;Parent=gene4979;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 273224%2C 375010%2C 1849492%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002405762.1,GeneID:7145228;gbkey=CDS;product=Insertion element IS1 1%2F5%2F6 protein insB;protein_id=YP_002405762.1;transl_table=11
NC_011748.1	RefSeq	gene	5010941	5011216	.	-	.	ID=gene4980;Name=EC55989_4906;Dbxref=GeneID:7145229;gbkey=Gene;locus_tag=EC55989_4906
NC_011748.1	RefSeq	CDS	5010941	5011216	.	-	0	ID=cds4615;Name=YP_002405763.1;Parent=gene4980;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 1849492%3B Product type r : regulator;Dbxref=Genbank:YP_002405763.1,GeneID:7145229;gbkey=CDS;product=IS1 repressor protein InsA;protein_id=YP_002405763.1;transl_table=11
NC_011748.1	RefSeq	gene	5011595	5011744	.	+	.	ID=gene4981;Name=EC55989_4907;Dbxref=GeneID:7145230;gbkey=Gene;locus_tag=EC55989_4907
NC_011748.1	RefSeq	CDS	5011595	5011744	.	+	0	ID=cds4616;Name=YP_002405764.1;Parent=gene4981;Note=Evidence 5 : No homology to any previously reported sequences;Dbxref=Genbank:YP_002405764.1,GeneID:7145230;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405764.1;transl_table=11
NC_011748.1	RefSeq	gene	5012004	5012300	.	+	.	ID=gene4982;Name=EC55989_4908;Dbxref=GeneID:7145231;gbkey=Gene;locus_tag=EC55989_4908
NC_011748.1	RefSeq	CDS	5012004	5012300	.	+	0	ID=cds4617;Name=YP_002405765.1;Parent=gene4982;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pr :  regulator;Dbxref=Genbank:YP_002405765.1,GeneID:7145231;gbkey=CDS;product=transcriptional regulator;protein_id=YP_002405765.1;transl_table=11
NC_011748.1	RefSeq	gene	5012450	5012629	.	+	.	ID=gene4983;Name=EC55989_4909;Dbxref=GeneID:7145232;gbkey=Gene;locus_tag=EC55989_4909
NC_011748.1	RefSeq	CDS	5012450	5012629	.	+	0	ID=cds4618;Name=YP_002405766.1;Parent=gene4983;Note=Evidence 5 : No homology to any previously reported sequences;Dbxref=Genbank:YP_002405766.1,GeneID:7145232;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405766.1;transl_table=11
NC_011748.1	RefSeq	gene	5012590	5012769	.	+	.	ID=gene4984;Name=EC55989_4910;Dbxref=GeneID:7145233;gbkey=Gene;locus_tag=EC55989_4910
NC_011748.1	RefSeq	CDS	5012590	5012769	.	+	0	ID=cds4619;Name=YP_002405767.1;Parent=gene4984;Note=Evidence 5 : No homology to any previously reported sequences;Dbxref=Genbank:YP_002405767.1,GeneID:7145233;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405767.1;transl_table=11
NC_011748.1	RefSeq	gene	5012734	5012889	.	-	.	ID=gene4985;Name=EC55989_4911;Dbxref=GeneID:7145234;gbkey=Gene;locus_tag=EC55989_4911
NC_011748.1	RefSeq	CDS	5012734	5012889	.	-	0	ID=cds4620;Name=YP_002405768.1;Parent=gene4985;Note=Evidence 5 : No homology to any previously reported sequences;Dbxref=Genbank:YP_002405768.1,GeneID:7145234;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405768.1;transl_table=11
NC_011748.1	RefSeq	gene	5012930	5014006	.	+	.	ID=gene4986;Name=EC55989_4912;Dbxref=GeneID:7145235;gbkey=Gene;locus_tag=EC55989_4912
NC_011748.1	RefSeq	CDS	5012930	5014006	.	+	0	ID=cds4621;Name=YP_002405769.1;Parent=gene4986;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002405769.1,GeneID:7145235;gbkey=CDS;product=Filamentation induced by cAMP protein Fic;protein_id=YP_002405769.1;transl_table=11
NC_011748.1	RefSeq	gene	5014057	5014686	.	-	.	ID=gene4987;Name=EC55989_4913;Dbxref=GeneID:7145236;gbkey=Gene;locus_tag=EC55989_4913
NC_011748.1	RefSeq	CDS	5014057	5014686	.	-	0	ID=cds4622;Name=YP_002405770.1;Parent=gene4987;Note=Evidence 5 : No homology to any previously reported sequences;Dbxref=Genbank:YP_002405770.1,GeneID:7145236;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405770.1;transl_table=11
NC_011748.1	RefSeq	gene	5014728	5015003	.	+	.	ID=gene4988;Name=insA;Dbxref=GeneID:7145237;gbkey=Gene;gene=insA;locus_tag=EC55989_4914
NC_011748.1	RefSeq	CDS	5014728	5015003	.	+	0	ID=cds4623;Name=YP_002405771.1;Parent=gene4988;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 1849492%3B Product type r : regulator;Dbxref=Genbank:YP_002405771.1,GeneID:7145237;gbkey=CDS;product=IS1 repressor protein InsA%3B KpLE2 phage-like element;protein_id=YP_002405771.1;transl_table=11
NC_011748.1	RefSeq	gene	5014922	5015425	.	+	.	ID=gene4989;Name=insB;Dbxref=GeneID:7146579;gbkey=Gene;gene=insB;locus_tag=EC55989_4915
NC_011748.1	RefSeq	CDS	5014922	5015425	.	+	0	ID=cds4624;Name=YP_002405772.1;Parent=gene4989;Note=Evidence 2b : Function of strongly homologous gene%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002405772.1,GeneID:7146579;gbkey=CDS;product=transposase ORF B%2C IS1;protein_id=YP_002405772.1;transl_table=11
NC_011748.1	RefSeq	gene	5015597	5016421	.	-	.	ID=gene4990;Name=EC55989_4916;Dbxref=GeneID:7146590;gbkey=Gene;locus_tag=EC55989_4916
NC_011748.1	RefSeq	CDS	5015597	5016421	.	-	0	ID=cds4625;Name=YP_002405773.1;Parent=gene4990;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pr :  regulator;Dbxref=Genbank:YP_002405773.1,GeneID:7146590;gbkey=CDS;product=Transcriptional regulator;protein_id=YP_002405773.1;transl_table=11
NC_011748.1	RefSeq	gene	5016548	5018143	.	+	.	ID=gene4991;Name=ptsG;Dbxref=GeneID:7145238;gbkey=Gene;gene=ptsG;locus_tag=EC55989_4917
NC_011748.1	RefSeq	CDS	5016548	5018143	.	+	0	ID=cds4626;Name=YP_002405774.1;Parent=gene4991;Note=Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism%3B PubMedId : 1508157%3B Product type e : enzyme;Dbxref=Genbank:YP_002405774.1,GeneID:7145238;gbkey=CDS;product=PTS system%2C glucose-specific enzyme II%2C ABC component;protein_id=YP_002405774.1;transl_table=11
NC_011748.1	RefSeq	gene	5018143	5018832	.	+	.	ID=gene4992;Name=nanE;Dbxref=GeneID:7147287;gbkey=Gene;gene=nanE;locus_tag=EC55989_4918
NC_011748.1	RefSeq	CDS	5018143	5018832	.	+	0	ID=cds4627;Name=YP_002405775.1;Parent=gene4992;Note=Converts N-acetylmannosamine-6-phosphate to N-acetylglucosamine-6-phosphate;Dbxref=Genbank:YP_002405775.1,GeneID:7147287;gbkey=CDS;product=N-acetylmannosamine-6-phosphate 2-epimerase;protein_id=YP_002405775.1;transl_table=11
NC_011748.1	RefSeq	gene	5018893	5019108	.	+	.	ID=gene4993;Name=EC55989_4919;Dbxref=GeneID:7146956;gbkey=Gene;locus_tag=EC55989_4919
NC_011748.1	RefSeq	CDS	5018893	5019108	.	+	0	ID=cds4628;Name=YP_002405776.1;Parent=gene4993;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405776.1,GeneID:7146956;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405776.1;transl_table=11
NC_011748.1	RefSeq	gene	5019087	5019308	.	+	.	ID=gene4994;Name=EC55989_4920;Dbxref=GeneID:7145239;gbkey=Gene;locus_tag=EC55989_4920
NC_011748.1	RefSeq	CDS	5019087	5019308	.	+	0	ID=cds4629;Name=YP_002405777.1;Parent=gene4994;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405777.1,GeneID:7145239;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405777.1;transl_table=11
NC_011748.1	RefSeq	gene	5019316	5019588	.	-	.	ID=gene4995;Name=EC55989_4921;Dbxref=GeneID:7145240;gbkey=Gene;locus_tag=EC55989_4921
NC_011748.1	RefSeq	CDS	5019316	5019588	.	-	0	ID=cds4630;Name=YP_002405778.1;Parent=gene4995;Note=Evidence 6 : Doubtful CDS;Dbxref=Genbank:YP_002405778.1,GeneID:7145240;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405778.1;transl_table=11
NC_011748.1	RefSeq	gene	5019740	5019898	.	+	.	ID=gene4996;Name=EC55989_4922;Dbxref=GeneID:7145241;gbkey=Gene;locus_tag=EC55989_4922
NC_011748.1	RefSeq	CDS	5019740	5019898	.	+	0	ID=cds4631;Name=YP_002405779.1;Parent=gene4996;Note=Evidence 6 : Doubtful CDS;Dbxref=Genbank:YP_002405779.1,GeneID:7145241;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405779.1;transl_table=11
NC_011748.1	RefSeq	gene	5020393	5020686	.	-	.	ID=gene4997;Name=EC55989_4923;Dbxref=GeneID:7145242;gbkey=Gene;locus_tag=EC55989_4923
NC_011748.1	RefSeq	CDS	5020393	5020686	.	-	0	ID=cds4632;Name=YP_002405780.1;Parent=gene4997;Note=Evidence 7 : Gene remnant;Dbxref=Genbank:YP_002405780.1,GeneID:7145242;gbkey=CDS;product=transposase %28fragment%29%2C IS110 family;protein_id=YP_002405780.1;transl_table=11
NC_011748.1	RefSeq	gene	5020729	5020947	.	-	.	ID=gene4998;Name=EC55989_4924;Dbxref=GeneID:7145243;gbkey=Gene;locus_tag=EC55989_4924
NC_011748.1	RefSeq	CDS	5020729	5020947	.	-	0	ID=cds4633;Name=YP_002405781.1;Parent=gene4998;Note=Evidence 7 : Gene remnant;Dbxref=Genbank:YP_002405781.1,GeneID:7145243;gbkey=CDS;product=transposase %28fragment%29%2C IS110 family;protein_id=YP_002405781.1;transl_table=11
NC_011748.1	RefSeq	gene	5021078	5022109	.	-	.	ID=gene4999;Name=vpeR;Dbxref=GeneID:7145244;gbkey=Gene;gene=vpeR;locus_tag=EC55989_4925
NC_011748.1	RefSeq	CDS	5021078	5022109	.	-	0	ID=cds4634;Name=YP_002405782.1;Parent=gene4999;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pr :  regulator;Dbxref=Genbank:YP_002405782.1,GeneID:7145244;gbkey=CDS;product=Transcriptional regulator;protein_id=YP_002405782.1;transl_table=11
NC_011748.1	RefSeq	gene	5022380	5022823	.	+	.	ID=gene5000;Name=vpeA;Dbxref=GeneID:7147952;gbkey=Gene;gene=vpeA;locus_tag=EC55989_4926
NC_011748.1	RefSeq	CDS	5022380	5022823	.	+	0	ID=cds4635;Name=YP_002405783.1;Parent=gene5000;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002405783.1,GeneID:7147952;gbkey=CDS;product=PTS system%2C specific IIA component;protein_id=YP_002405783.1;transl_table=11
NC_011748.1	RefSeq	gene	5022839	5023126	.	+	.	ID=gene5001;Name=vpeB;Dbxref=GeneID:7147949;gbkey=Gene;gene=vpeB;locus_tag=EC55989_4927
NC_011748.1	RefSeq	CDS	5022839	5023126	.	+	0	ID=cds4636;Name=YP_002405784.1;Parent=gene5001;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002405784.1,GeneID:7147949;gbkey=CDS;product=PTS system%2C specific IIB component;protein_id=YP_002405784.1;transl_table=11
NC_011748.1	RefSeq	gene	5023139	5024395	.	+	.	ID=gene5002;Name=vpeC;Dbxref=GeneID:7147950;gbkey=Gene;gene=vpeC;locus_tag=EC55989_4928
NC_011748.1	RefSeq	CDS	5023139	5024395	.	+	0	ID=cds4637;Name=YP_002405785.1;Parent=gene5002;Note=membrane component%3B functions with enzymes IIB %28sgaB%3B ulaB%29 and IIA %28sgaA%3B ulaC%29 enzyme I and HPr for anaerobic utilization and uptake of L-ascorbate%3B sgaTBA are regulated by yifQ as well as Crp and Fnr;Dbxref=Genbank:YP_002405785.1,GeneID:7147950;gbkey=CDS;product=PTS system ascorbate-specific transporter subunit IIC;protein_id=YP_002405785.1;transl_table=11
NC_011748.1	RefSeq	gene	5024642	5024896	.	-	.	ID=gene5003;Name=EC55989_4929;Dbxref=GeneID:7147951;gbkey=Gene;locus_tag=EC55989_4929
NC_011748.1	RefSeq	CDS	5024642	5024896	.	-	0	ID=cds4638;Name=YP_002405786.1;Parent=gene5003;Note=Evidence 7 : Gene remnant;Dbxref=Genbank:YP_002405786.1,GeneID:7147951;gbkey=CDS;product=transposase ORF1%2C IS3 family %28fragment%29;protein_id=YP_002405786.1;transl_table=11
NC_011748.1	RefSeq	gene	5025112	5025189	.	+	.	ID=gene5004;Name=insC;Dbxref=GeneID:7145245;gbkey=Gene;gene=insC;locus_tag=EC55989_4930;pseudo=true
NC_011748.1	RefSeq	region	5025112	5025189	.	+	.	ID=id419;Note=fragment of IS2 insertion element repressor InsA%3B KpLE2 phage-like element %28partial%29%3BEvidence 7 : Gene remnant%3B Product type r : regulator;Dbxref=GeneID:7145245;gbkey=misc_feature
NC_011748.1	RefSeq	gene	5025318	5026331	.	-	.	ID=gene5005;Name=deoM;Dbxref=GeneID:7146591;gbkey=Gene;gene=deoM;locus_tag=EC55989_4931
NC_011748.1	RefSeq	CDS	5025318	5026331	.	-	0	ID=cds4639;Name=YP_002405787.1;Parent=gene5005;Note=Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism%3B PubMedId : 15075407%3B Product type e : enzyme;Dbxref=Genbank:YP_002405787.1,GeneID:7146591;gbkey=CDS;product=Deoxyribose specific mutarotase;protein_id=YP_002405787.1;transl_table=11
NC_011748.1	RefSeq	gene	5026343	5027659	.	-	.	ID=gene5006;Name=deoP;Dbxref=GeneID:7145887;gbkey=Gene;gene=deoP;locus_tag=EC55989_4932
NC_011748.1	RefSeq	CDS	5026343	5027659	.	-	0	ID=cds4640;Name=YP_002405788.1;Parent=gene5006;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 5385522%2C 15075407%2C 10648508%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002405788.1,GeneID:7145887;gbkey=CDS;product=L-fucose permease;protein_id=YP_002405788.1;transl_table=11
NC_011748.1	RefSeq	gene	5027687	5028634	.	-	.	ID=gene5007;Name=deoK;Dbxref=GeneID:7145888;gbkey=Gene;gene=deoK;locus_tag=EC55989_4933
NC_011748.1	RefSeq	CDS	5027687	5028634	.	-	0	ID=cds4641;Name=YP_002405789.1;Parent=gene5007;Note=Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism%3B PubMedId : 10648508%2C 15385522%3B Product type e : enzyme;Dbxref=Genbank:YP_002405789.1,GeneID:7145888;gbkey=CDS;product=Deoxyribokinase;protein_id=YP_002405789.1;transl_table=11
NC_011748.1	RefSeq	gene	5028910	5029695	.	+	.	ID=gene5008;Name=deoQ;Dbxref=GeneID:7145886;gbkey=Gene;gene=deoQ;locus_tag=EC55989_4935
NC_011748.1	RefSeq	CDS	5028910	5029695	.	+	0	ID=cds4642;Name=YP_002405790.1;Parent=gene5008;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 15385522%2C 10648508%3B Product type pr :  regulator;Dbxref=Genbank:YP_002405790.1,GeneID:7145886;gbkey=CDS;product=transcriptional regulator;protein_id=YP_002405790.1;transl_table=11
NC_011748.1	RefSeq	gene	5029697	5029795	.	-	.	ID=gene5009;Name=ilvN;Dbxref=GeneID:7145889;gbkey=Gene;gene=ilvN;locus_tag=EC55989_4936;pseudo=true
NC_011748.1	RefSeq	region	5029697	5029795	.	-	.	ID=id420;Note=fragment of acetolactate synthase I%2C small subunit %28part 2%29%3BEvidence 7 : Gene remnant%3B Product type e : enzyme;Dbxref=GeneID:7145889;gbkey=misc_feature
NC_011748.1	RefSeq	gene	5029796	5029912	.	-	.	ID=gene5010;Name=ilvN;Dbxref=GeneID:7146560;gbkey=Gene;gene=ilvN;locus_tag=EC55989_4937;pseudo=true
NC_011748.1	RefSeq	region	5029796	5029912	.	-	.	ID=id421;Note=fragment of acetolactate synthase I%2C small subunit %28part 1%29%3BEvidence 7 : Gene remnant%3B Product type e : enzyme;Dbxref=GeneID:7146560;gbkey=misc_feature
NC_011748.1	RefSeq	gene	5030879	5032492	.	-	.	ID=gene5011;Name=EC55989_4940;Dbxref=GeneID:7146561;gbkey=Gene;locus_tag=EC55989_4940
NC_011748.1	RefSeq	CDS	5030879	5032492	.	-	0	ID=cds4643;Name=YP_002405791.1;Parent=gene5011;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405791.1,GeneID:7146561;gbkey=CDS;product=transposase ORF1%2C IS66 family;protein_id=YP_002405791.1;transl_table=11
NC_011748.1	RefSeq	gene	5032523	5032873	.	-	.	ID=gene5012;Name=EC55989_4941;Dbxref=GeneID:7145246;gbkey=Gene;locus_tag=EC55989_4941
NC_011748.1	RefSeq	CDS	5032523	5032873	.	-	0	ID=cds4644;Name=YP_002405792.1;Parent=gene5012;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405792.1,GeneID:7145246;gbkey=CDS;product=transposase ORF2%2C IS66 family;protein_id=YP_002405792.1;transl_table=11
NC_011748.1	RefSeq	gene	5032870	5033295	.	-	.	ID=gene5013;Name=EC55989_4942;Dbxref=GeneID:7145247;gbkey=Gene;locus_tag=EC55989_4942
NC_011748.1	RefSeq	CDS	5032870	5033295	.	-	0	ID=cds4645;Name=YP_002405793.1;Parent=gene5013;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002405793.1,GeneID:7145247;gbkey=CDS;product=transposase OrfA from plasmid origin;protein_id=YP_002405793.1;transl_table=11
NC_011748.1	RefSeq	gene	5033434	5033562	.	+	.	ID=gene5014;Name=EC55989_4943;Dbxref=GeneID:7145248;gbkey=Gene;locus_tag=EC55989_4943
NC_011748.1	RefSeq	CDS	5033434	5033562	.	+	0	ID=cds4646;Name=YP_002405794.1;Parent=gene5014;Note=Evidence 7 : Gene remnant%3B Product type f : factor;Dbxref=Genbank:YP_002405794.1,GeneID:7145248;gbkey=CDS;product=Protein yhdH %28fragment%29;protein_id=YP_002405794.1;transl_table=11
NC_011748.1	RefSeq	gene	5033743	5034426	.	-	.	ID=gene5015;Name=EC55989_4944;Dbxref=GeneID:7145249;gbkey=Gene;locus_tag=EC55989_4944
NC_011748.1	RefSeq	CDS	5033743	5034426	.	-	0	ID=cds4647;Name=YP_002405795.1;Parent=gene5015;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pr :  regulator;Dbxref=Genbank:YP_002405795.1,GeneID:7145249;gbkey=CDS;product=HTH regulator%2C TetR family;protein_id=YP_002405795.1;transl_table=11
NC_011748.1	RefSeq	gene	5034645	5035937	.	-	.	ID=gene5016;Name=EC55989_4945;Dbxref=GeneID:7145250;gbkey=Gene;locus_tag=EC55989_4945
NC_011748.1	RefSeq	CDS	5034645	5035937	.	-	0	ID=cds4648;Name=YP_002405796.1;Parent=gene5016;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405796.1,GeneID:7145250;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405796.1;transl_table=11
NC_011748.1	RefSeq	gene	5035985	5037988	.	-	.	ID=gene5017;Name=EC55989_4947;Dbxref=GeneID:7145251;gbkey=Gene;locus_tag=EC55989_4947
NC_011748.1	RefSeq	CDS	5035985	5037988	.	-	0	ID=cds4649;Name=YP_002405797.1;Parent=gene5017;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 14702297%3B Product type t : transporter;Dbxref=Genbank:YP_002405797.1,GeneID:7145251;gbkey=CDS;product=betaine-carnitine-choline transporter family member BetU;protein_id=YP_002405797.1;transl_table=11
NC_011748.1	RefSeq	gene	5038136	5039275	.	-	.	ID=gene5018;Name=EC55989_4948;Dbxref=GeneID:7145252;gbkey=Gene;locus_tag=EC55989_4948
NC_011748.1	RefSeq	CDS	5038136	5039275	.	-	0	ID=cds4650;Name=YP_002405798.1;Parent=gene5018;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405798.1,GeneID:7145252;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405798.1;transl_table=11
NC_011748.1	RefSeq	gene	5039456	5040400	.	-	.	ID=gene5019;Name=msbB;Dbxref=GeneID:7145253;gbkey=Gene;gene=msbB;locus_tag=EC55989_4949
NC_011748.1	RefSeq	CDS	5039456	5040400	.	-	0	ID=cds4651;Name=YP_002405799.1;Parent=gene5019;Note=Transfers myristate or laurate%2C activated on ACP%2C to the lipid IVA moiety of %28KDO%292-%28lauroyl%29-lipid IVA;Dbxref=Genbank:YP_002405799.1,GeneID:7145253;gbkey=CDS;product=lipid A biosynthesis %28KDO%292-%28lauroyl%29-lipid IVA acyltransferase;protein_id=YP_002405799.1;transl_table=11
NC_011748.1	RefSeq	gene	5040465	5041415	.	-	.	ID=gene5020;Name=virK;Dbxref=GeneID:7146907;gbkey=Gene;gene=virK;locus_tag=EC55989_4950
NC_011748.1	RefSeq	CDS	5040465	5041415	.	-	0	ID=cds4652;Name=YP_002405800.1;Parent=gene5020;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 1406277%3B Product type r : regulator;Dbxref=Genbank:YP_002405800.1,GeneID:7146907;gbkey=CDS;product=regulator of virG protein;protein_id=YP_002405800.1;transl_table=11
NC_011748.1	RefSeq	gene	5041420	5042508	.	-	.	ID=gene5021;Name=EC55989_4951;Dbxref=GeneID:7147947;gbkey=Gene;locus_tag=EC55989_4951
NC_011748.1	RefSeq	CDS	5041420	5042508	.	-	0	ID=cds4653;Name=YP_002405801.1;Parent=gene5021;Note=Evidence 2b : Function of strongly homologous gene%3B Product type e : enzyme;Dbxref=Genbank:YP_002405801.1,GeneID:7147947;gbkey=CDS;product=Glycosyl transferase;protein_id=YP_002405801.1;transl_table=11
NC_011748.1	RefSeq	gene	5042511	5043332	.	-	.	ID=gene5022;Name=shf;Dbxref=GeneID:7145254;gbkey=Gene;gene=shf;locus_tag=EC55989_4952
NC_011748.1	RefSeq	CDS	5042511	5043332	.	-	0	ID=cds4654;Name=YP_002405802.1;Parent=gene5022;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002405802.1,GeneID:7145254;gbkey=CDS;product=polysaccharide deacetylase;protein_id=YP_002405802.1;transl_table=11
NC_011748.1	RefSeq	gene	5043497	5043841	.	+	.	ID=gene5023;Name=EC55989_4953;Dbxref=GeneID:7147652;gbkey=Gene;locus_tag=EC55989_4953
NC_011748.1	RefSeq	CDS	5043497	5043841	.	+	0	ID=cds4655;Name=YP_002405803.1;Parent=gene5023;Note=Evidence 2b : Function of strongly homologous gene%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002405803.1,GeneID:7147652;gbkey=CDS;product=transposase ORF A%2C IS911;protein_id=YP_002405803.1;transl_table=11
NC_011748.1	RefSeq	gene	5043897	5044322	.	+	.	ID=gene5024;Name=insO;Dbxref=GeneID:7145255;gbkey=Gene;gene=insO;locus_tag=EC55989_4954;pseudo=true
NC_011748.1	RefSeq	region	5043897	5044322	.	+	.	ID=id422;Note=fragment of transposase ORF B %28fragment%29%2C IS911 %28part 1%29%3BEvidence 7 : Gene remnant%3B Product type pe :  enzyme;Dbxref=GeneID:7145255;gbkey=misc_feature
NC_011748.1	RefSeq	gene	5044914	5046437	.	+	.	ID=gene5025;Name=EC55989_4955;Dbxref=GeneID:7146600;gbkey=Gene;locus_tag=EC55989_4955
NC_011748.1	RefSeq	CDS	5044914	5046437	.	+	0	ID=cds4656;Name=YP_002405804.1;Parent=gene5025;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type h : extrachromosomal origin;Dbxref=Genbank:YP_002405804.1,GeneID:7146600;gbkey=CDS;product=reverse transcriptase-like protein from prophage or plasmid;protein_id=YP_002405804.1;transl_table=11
NC_011748.1	RefSeq	gene	5046441	5046527	.	+	.	ID=gene5026;Name=EC55989_misc_RNA_108;Dbxref=GeneID:7145256;gbkey=Gene;locus_tag=EC55989_misc_RNA_108
NC_011748.1	RefSeq	transcript	5046441	5046527	.	+	.	ID=rna219;Parent=gene5026;Dbxref=GeneID:7145256;gbkey=misc_RNA;product=Intron_gpII
NC_011748.1	RefSeq	exon	5046441	5046527	.	+	.	ID=id423;Parent=rna219;Dbxref=GeneID:7145256;gbkey=misc_RNA;product=Intron_gpII
NC_011748.1	RefSeq	gene	5046590	5046766	.	+	.	ID=gene5027;Name=insO;Dbxref=GeneID:7145300;gbkey=Gene;gene=insO;locus_tag=EC55989_4956;pseudo=true
NC_011748.1	RefSeq	region	5046590	5046766	.	+	.	ID=id424;Note=fragment of transposase ORF B %28fragment%29%2C IS911 %28part 2%29%3BEvidence 7 : Gene remnant%3B Product type pe :  enzyme;Dbxref=GeneID:7145300;gbkey=misc_feature
NC_011748.1	RefSeq	gene	5046835	5047005	.	+	.	ID=gene5028;Name=EC55989_4957;Dbxref=GeneID:7146601;gbkey=Gene;locus_tag=EC55989_4957;pseudo=true
NC_011748.1	RefSeq	region	5046835	5047005	.	+	.	ID=id425;Note=fragment of transposase ORF B%2C IS911 %28partial%29%3BEvidence 7 : Gene remnant%3B Product type pe :  enzyme;Dbxref=GeneID:7146601;gbkey=misc_feature
NC_011748.1	RefSeq	gene	5046932	5047345	.	+	.	ID=gene5029;Name=yjhV;Dbxref=GeneID:7145257;gbkey=Gene;gene=yjhV;locus_tag=EC55989_4958
NC_011748.1	RefSeq	CDS	5046932	5047345	.	+	0	ID=cds4657;Name=YP_002405805.1;Parent=gene5029;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405805.1,GeneID:7145257;gbkey=CDS;product=KpLE2 phage-like element;protein_id=YP_002405805.1;transl_table=11
NC_011748.1	RefSeq	gene	5047903	5048670	.	-	.	ID=gene5030;Name=fecE;Dbxref=GeneID:7149206;gbkey=Gene;gene=fecE;locus_tag=EC55989_4959
NC_011748.1	RefSeq	CDS	5047903	5048670	.	-	0	ID=cds4658;Name=YP_002405806.1;Parent=gene5030;Note=Part of the FecBCDE citrate-dependent iron %28III%29 transport system;Dbxref=Genbank:YP_002405806.1,GeneID:7149206;gbkey=CDS;product=iron-dicitrate transporter ATP-binding subunit;protein_id=YP_002405806.1;transl_table=11
NC_011748.1	RefSeq	gene	5048474	5048638	.	+	.	ID=gene5031;Name=EC55989_4960;Dbxref=GeneID:7146083;gbkey=Gene;locus_tag=EC55989_4960
NC_011748.1	RefSeq	CDS	5048474	5048638	.	+	0	ID=cds4659;Name=YP_002405807.1;Parent=gene5031;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405807.1,GeneID:7146083;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405807.1;transl_table=11
NC_011748.1	RefSeq	gene	5048671	5049627	.	-	.	ID=gene5032;Name=fecD;Dbxref=GeneID:7145258;gbkey=Gene;gene=fecD;locus_tag=EC55989_4961
NC_011748.1	RefSeq	CDS	5048671	5049627	.	-	0	ID=cds4660;Name=YP_002405808.1;Parent=gene5032;Note=Ferric citrate binds FecA and is transported across the outer membrane while transmits a signal across the cytoplasmic membrane protein FecR. FecR transmits a signal across the membrane and activates the cytoplasmic FecI that directs the RNA polymerase to express the fecABCDE operon %28which encodes the ferric citrate outer membrane receptor and the ferric citrate ABC transporter%29%2C as well as fecIR. FecD is one of two %28along with FecC%29 integral membrane protein components of the iron dicitrate ABC transporter.;Dbxref=Genbank:YP_002405808.1,GeneID:7145258;gbkey=CDS;product=iron-dicitrate transporter subunit FecD;protein_id=YP_002405808.1;transl_table=11
NC_011748.1	RefSeq	gene	5049624	5050622	.	-	.	ID=gene5033;Name=fecC;Dbxref=GeneID:7146082;gbkey=Gene;gene=fecC;locus_tag=EC55989_4962
NC_011748.1	RefSeq	CDS	5049624	5050622	.	-	0	ID=cds4661;Name=YP_002405809.1;Parent=gene5033;Note=part of the FecBCDE citrate-dependent iron %28III%29 transport system;Dbxref=Genbank:YP_002405809.1,GeneID:7146082;gbkey=CDS;product=iron-dicitrate transporter permease subunit;protein_id=YP_002405809.1;transl_table=11
NC_011748.1	RefSeq	gene	5050619	5051521	.	-	.	ID=gene5034;Name=fecB;Dbxref=GeneID:7146081;gbkey=Gene;gene=fecB;locus_tag=EC55989_4963
NC_011748.1	RefSeq	CDS	5050619	5051521	.	-	0	ID=cds4662;Name=YP_002405810.1;Parent=gene5034;Note=part of the ABC transporter involved in the uptake of citrate-dependent Fe%283%2B%29;Dbxref=Genbank:YP_002405810.1,GeneID:7146081;gbkey=CDS;product=iron-dicitrate transporter substrate-binding subunit;protein_id=YP_002405810.1;transl_table=11
NC_011748.1	RefSeq	gene	5051566	5053890	.	-	.	ID=gene5035;Name=fecA;Dbxref=GeneID:7146080;gbkey=Gene;gene=fecA;locus_tag=EC55989_4964
NC_011748.1	RefSeq	CDS	5051566	5053890	.	-	0	ID=cds4663;Name=YP_002405811.1;Parent=gene5035;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 90105402%2C 91072220%2C 92269759%2C 2836368%3B Product type t : transporter;Dbxref=Genbank:YP_002405811.1,GeneID:7146080;gbkey=CDS;product=ferric citrate outer membrane transporter%3B KpLE2 phage-like element;protein_id=YP_002405811.1;transl_table=11
NC_011748.1	RefSeq	gene	5053977	5054930	.	-	.	ID=gene5036;Name=fecR;Dbxref=GeneID:7146079;gbkey=Gene;gene=fecR;locus_tag=EC55989_4965
NC_011748.1	RefSeq	CDS	5053977	5054930	.	-	0	ID=cds4664;Name=YP_002405812.1;Parent=gene5036;Note=with FecA forms the FecAR signal transduction system%3B ferric citrate binds FecA and transmits a signal across the outer membrane to FecR. FecR transmits a signal across the cytoplasmic membrane and activates the sigma 70 protein FecI that directs the RNA polymerase to express the fecABCDE operon;Dbxref=Genbank:YP_002405812.1,GeneID:7146079;gbkey=CDS;product=fec operon regulator FecR;protein_id=YP_002405812.1;transl_table=11
NC_011748.1	RefSeq	gene	5054927	5055448	.	-	.	ID=gene5037;Name=fecI;Dbxref=GeneID:7146085;gbkey=Gene;gene=fecI;locus_tag=EC55989_4966
NC_011748.1	RefSeq	CDS	5054927	5055448	.	-	0	ID=cds4665;Name=YP_002405813.1;Parent=gene5037;Note=Member of the extracytoplasmic function sigma factors which are active under specific conditions%3B binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription%3B this sigma factor regulates the genes for iron dicitrate transport;Dbxref=Genbank:YP_002405813.1,GeneID:7146085;gbkey=CDS;product=RNA polymerase sigma factor FecI;protein_id=YP_002405813.1;transl_table=11
NC_011748.1	RefSeq	gene	5056786	5056995	.	-	.	ID=gene5038;Name=EC55989_4968;Dbxref=GeneID:7146084;gbkey=Gene;locus_tag=EC55989_4968
NC_011748.1	RefSeq	CDS	5056786	5056995	.	-	0	ID=cds4666;Name=YP_002405814.1;Parent=gene5038;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405814.1,GeneID:7146084;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405814.1;transl_table=11
NC_011748.1	RefSeq	gene	5057359	5058732	.	+	.	ID=gene5039;Name=EC55989_4969;Dbxref=GeneID:7145259;gbkey=Gene;locus_tag=EC55989_4969
NC_011748.1	RefSeq	CDS	5057359	5058732	.	+	0	ID=cds4667;Name=YP_002405815.1;Parent=gene5039;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405815.1,GeneID:7145259;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405815.1;transl_table=11
NC_011748.1	RefSeq	gene	5058971	5060356	.	-	.	ID=gene5040;Name=EC55989_4970;Dbxref=GeneID:7145260;gbkey=Gene;locus_tag=EC55989_4970
NC_011748.1	RefSeq	CDS	5058971	5060356	.	-	0	ID=cds4668;Name=YP_002405816.1;Parent=gene5040;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405816.1,GeneID:7145260;gbkey=CDS;product=transposase;protein_id=YP_002405816.1;transl_table=11
NC_011748.1	RefSeq	STS	5059183	5059605	.	+	.	ID=id426;Dbxref=UniSTS:474274;gbkey=STS
NC_011748.1	RefSeq	gene	5060406	5060753	.	-	.	ID=gene5041;Name=EC55989_4971;Dbxref=GeneID:7145261;gbkey=Gene;locus_tag=EC55989_4971
NC_011748.1	RefSeq	CDS	5060406	5060753	.	-	0	ID=cds4669;Name=YP_002405817.1;Parent=gene5041;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405817.1,GeneID:7145261;gbkey=CDS;product=transposase ORF2%2C IS66 family;protein_id=YP_002405817.1;transl_table=11
NC_011748.1	RefSeq	STS	5060636	5060864	.	+	.	ID=id427;Dbxref=UniSTS:234311;gbkey=STS
NC_011748.1	RefSeq	gene	5060750	5061151	.	-	.	ID=gene5042;Name=EC55989_4972;Dbxref=GeneID:7145262;gbkey=Gene;locus_tag=EC55989_4972
NC_011748.1	RefSeq	CDS	5060750	5061151	.	-	0	ID=cds4670;Name=YP_002405818.1;Parent=gene5042;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405818.1,GeneID:7145262;gbkey=CDS;product=transposase%2C IS3 family;protein_id=YP_002405818.1;transl_table=11
NC_011748.1	RefSeq	gene	5061485	5062006	.	-	.	ID=gene5043;Name=EC55989_4973;Dbxref=GeneID:7145263;gbkey=Gene;locus_tag=EC55989_4973
NC_011748.1	RefSeq	CDS	5061485	5062006	.	-	0	ID=cds4671;Name=YP_002405819.1;Parent=gene5043;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405819.1,GeneID:7145263;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405819.1;transl_table=11
NC_011748.1	RefSeq	gene	5061907	5062314	.	-	.	ID=gene5044;Name=EC55989_4974;Dbxref=GeneID:7145264;gbkey=Gene;locus_tag=EC55989_4974
NC_011748.1	RefSeq	CDS	5061907	5062314	.	-	0	ID=cds4672;Name=YP_002405820.1;Parent=gene5044;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405820.1,GeneID:7145264;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405820.1;transl_table=11
NC_011748.1	RefSeq	gene	5062568	5063173	.	-	.	ID=gene5045;Name=EC55989_4975;Dbxref=GeneID:7145265;gbkey=Gene;locus_tag=EC55989_4975
NC_011748.1	RefSeq	CDS	5062568	5063173	.	-	0	ID=cds4673;Name=YP_002405821.1;Parent=gene5045;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405821.1,GeneID:7145265;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405821.1;transl_table=11
NC_011748.1	RefSeq	gene	5063878	5064054	.	-	.	ID=gene5046;Name=EC55989_4976;Dbxref=GeneID:7145266;gbkey=Gene;locus_tag=EC55989_4976
NC_011748.1	RefSeq	CDS	5063878	5064054	.	-	0	ID=cds4674;Name=YP_002405822.1;Parent=gene5046;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pr :  regulator;Dbxref=Genbank:YP_002405822.1,GeneID:7145266;gbkey=CDS;product=transcriptional regulator;protein_id=YP_002405822.1;transl_table=11
NC_011748.1	RefSeq	gene	5064355	5064621	.	-	.	ID=gene5047;Name=EC55989_4977;Dbxref=GeneID:7145267;gbkey=Gene;locus_tag=EC55989_4977
NC_011748.1	RefSeq	CDS	5064355	5064621	.	-	0	ID=cds4675;Name=YP_002405823.1;Parent=gene5047;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405823.1,GeneID:7145267;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405823.1;transl_table=11
NC_011748.1	RefSeq	gene	5064567	5064968	.	+	.	ID=gene5048;Name=EC55989_4978;Dbxref=GeneID:7145268;gbkey=Gene;locus_tag=EC55989_4978
NC_011748.1	RefSeq	CDS	5064567	5064968	.	+	0	ID=cds4676;Name=YP_002405824.1;Parent=gene5048;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405824.1,GeneID:7145268;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405824.1;transl_table=11
NC_011748.1	RefSeq	gene	5065048	5065665	.	+	.	ID=gene5049;Name=EC55989_4979;Dbxref=GeneID:7145269;gbkey=Gene;locus_tag=EC55989_4979
NC_011748.1	RefSeq	CDS	5065048	5065665	.	+	0	ID=cds4677;Name=YP_002405825.1;Parent=gene5049;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405825.1,GeneID:7145269;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405825.1;transl_table=11
NC_011748.1	RefSeq	gene	5065837	5066034	.	+	.	ID=gene5050;Name=EC55989_4980;Dbxref=GeneID:7145270;gbkey=Gene;locus_tag=EC55989_4980
NC_011748.1	RefSeq	CDS	5065837	5066034	.	+	0	ID=cds4678;Name=YP_002405826.1;Parent=gene5050;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405826.1,GeneID:7145270;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405826.1;transl_table=11
NC_011748.1	RefSeq	gene	5066866	5067543	.	+	.	ID=gene5051;Name=EC55989_4981;Dbxref=GeneID:7145271;gbkey=Gene;locus_tag=EC55989_4981
NC_011748.1	RefSeq	CDS	5066866	5067543	.	+	0	ID=cds4679;Name=YP_002405827.1;Parent=gene5051;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405827.1,GeneID:7145271;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405827.1;transl_table=11
NC_011748.1	RefSeq	gene	5067554	5068057	.	-	.	ID=gene5052;Name=EC55989_4982;Dbxref=GeneID:7145272;gbkey=Gene;locus_tag=EC55989_4982
NC_011748.1	RefSeq	CDS	5067554	5068057	.	-	0	ID=cds4680;Name=YP_002405828.1;Parent=gene5052;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 273224%2C 375010%2C 1849492%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002405828.1,GeneID:7145272;gbkey=CDS;product=Insertion element IS1 1%2F5%2F6 protein InsB;protein_id=YP_002405828.1;transl_table=11
NC_011748.1	RefSeq	gene	5067976	5068251	.	-	.	ID=gene5053;Name=EC55989_4983;Dbxref=GeneID:7145273;gbkey=Gene;locus_tag=EC55989_4983
NC_011748.1	RefSeq	CDS	5067976	5068251	.	-	0	ID=cds4681;Name=YP_002405829.1;Parent=gene5053;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 1849492%3B Product type r : regulator;Dbxref=Genbank:YP_002405829.1,GeneID:7145273;gbkey=CDS;product=IS1 repressor protein insA;protein_id=YP_002405829.1;transl_table=11
NC_011748.1	RefSeq	gene	5068309	5068476	.	+	.	ID=gene5054;Name=fimH;Dbxref=GeneID:7145274;gbkey=Gene;gene=fimH;locus_tag=EC55989_4984;pseudo=true
NC_011748.1	RefSeq	region	5068309	5068476	.	+	.	ID=id428;Note=fragment of minor component of type 1 fimbriae %28partial%29%3BEvidence 7 : Gene remnant%3B Product type s : structure;Dbxref=GeneID:7145274;gbkey=misc_feature
NC_011748.1	RefSeq	gene	5068650	5069993	.	-	.	ID=gene5055;Name=gntP;Dbxref=GeneID:7146111;gbkey=Gene;gene=gntP;locus_tag=EC55989_4985
NC_011748.1	RefSeq	CDS	5068650	5069993	.	-	0	ID=cds4682;Name=YP_002405830.1;Parent=gene5055;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 96125229%2C 15516583%2C 8550444%3B Product type t : transporter;Dbxref=Genbank:YP_002405830.1,GeneID:7146111;gbkey=CDS;product=fructuronate transporter;protein_id=YP_002405830.1;transl_table=11
NC_011748.1	RefSeq	gene	5070073	5070381	.	+	.	ID=gene5056;Name=EC55989_4986;Dbxref=GeneID:7146350;gbkey=Gene;locus_tag=EC55989_4986
NC_011748.1	RefSeq	CDS	5070073	5070381	.	+	0	ID=cds4683;Name=YP_002405831.1;Parent=gene5056;Note=Evidence 6 : Doubtful CDS;Dbxref=Genbank:YP_002405831.1,GeneID:7146350;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405831.1;transl_table=11
NC_011748.1	RefSeq	gene	5070333	5071517	.	+	.	ID=gene5057;Name=uxuA;Dbxref=GeneID:7145275;gbkey=Gene;gene=uxuA;locus_tag=EC55989_4987
NC_011748.1	RefSeq	CDS	5070333	5071517	.	+	0	ID=cds4684;Name=YP_002405832.1;Parent=gene5057;Note=catalyzes the formation of 2-dehydro-3-deoxy-D-gluconate from mannonate;Dbxref=Genbank:YP_002405832.1,GeneID:7145275;gbkey=CDS;product=mannonate dehydratase;protein_id=YP_002405832.1;transl_table=11
NC_011748.1	RefSeq	gene	5071598	5073058	.	+	.	ID=gene5058;Name=uxuB;Dbxref=GeneID:7147941;gbkey=Gene;gene=uxuB;locus_tag=EC55989_4988
NC_011748.1	RefSeq	CDS	5071598	5073058	.	+	0	ID=cds4685;Name=YP_002405833.1;Parent=gene5058;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 73203083%2C 77222076%2C 14401695%3B Product type e : enzyme;Dbxref=Genbank:YP_002405833.1,GeneID:7147941;gbkey=CDS;product=D-mannonate oxidoreductase%2C NAD-binding;protein_id=YP_002405833.1;transl_table=11
NC_011748.1	RefSeq	gene	5073273	5074046	.	+	.	ID=gene5059;Name=uxuR;Dbxref=GeneID:7147942;gbkey=Gene;gene=uxuR;locus_tag=EC55989_4989
NC_011748.1	RefSeq	CDS	5073273	5074046	.	+	0	ID=cds4686;Name=YP_002405834.1;Parent=gene5059;Note=regulates the expression of uxuBA;Dbxref=Genbank:YP_002405834.1,GeneID:7147942;gbkey=CDS;product=DNA-binding transcriptional repressor UxuR;protein_id=YP_002405834.1;transl_table=11
NC_011748.1	RefSeq	gene	5074187	5075017	.	-	.	ID=gene5060;Name=yjiC;Dbxref=GeneID:7147943;gbkey=Gene;gene=yjiC;locus_tag=EC55989_4990
NC_011748.1	RefSeq	CDS	5074187	5075017	.	-	0	ID=cds4687;Name=YP_002405835.1;Parent=gene5060;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405835.1,GeneID:7147943;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405835.1;transl_table=11
NC_011748.1	RefSeq	gene	5075580	5075723	.	+	.	ID=gene5061;Name=EC55989_4991;Dbxref=GeneID:7149208;gbkey=Gene;locus_tag=EC55989_4991
NC_011748.1	RefSeq	CDS	5075580	5075723	.	+	0	ID=cds4688;Name=YP_002405836.1;Parent=gene5061;Note=Evidence 6 : Doubtful CDS;Dbxref=Genbank:YP_002405836.1,GeneID:7149208;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405836.1;transl_table=11
NC_011748.1	RefSeq	gene	5075689	5076081	.	+	.	ID=gene5062;Name=iraD;Dbxref=GeneID:7145276;gbkey=Gene;gene=iraD;locus_tag=EC55989_4992
NC_011748.1	RefSeq	CDS	5075689	5076081	.	+	0	ID=cds4689;Name=YP_002405837.1;Parent=gene5062;Note=inhibitor of RssB activity in response to DNA damage%3B blocks degradation of stationary phase sigma factor RpoS;Dbxref=Genbank:YP_002405837.1,GeneID:7145276;gbkey=CDS;product=DNA replication%2Frecombination%2Frepair protein;protein_id=YP_002405837.1;transl_table=11
NC_011748.1	RefSeq	gene	5076074	5076985	.	-	.	ID=gene5063;Name=yjiE;Dbxref=GeneID:7149209;gbkey=Gene;gene=yjiE;locus_tag=EC55989_4993
NC_011748.1	RefSeq	CDS	5076074	5076985	.	-	0	ID=cds4690;Name=YP_002405838.1;Parent=gene5063;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pr :  regulator;Dbxref=Genbank:YP_002405838.1,GeneID:7149209;gbkey=CDS;product=DNA-binding transcriptional regulator;protein_id=YP_002405838.1;transl_table=11
NC_011748.1	RefSeq	gene	5077050	5078222	.	-	.	ID=gene5064;Name=iadA;Dbxref=GeneID:7149210;gbkey=Gene;gene=iadA;locus_tag=EC55989_4994
NC_011748.1	RefSeq	CDS	5077050	5078222	.	-	0	ID=cds4691;Name=YP_002405839.1;Parent=gene5064;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 95181377%2C 7876157%3B Product type e : enzyme;Dbxref=Genbank:YP_002405839.1,GeneID:7149210;gbkey=CDS;product=isoaspartyl dipeptidase;protein_id=YP_002405839.1;transl_table=11
NC_011748.1	RefSeq	gene	5078235	5078696	.	-	.	ID=gene5065;Name=yjiG;Dbxref=GeneID:7146529;gbkey=Gene;gene=yjiG;locus_tag=EC55989_4995
NC_011748.1	RefSeq	CDS	5078235	5078696	.	-	0	ID=cds4692;Name=YP_002405840.1;Parent=gene5065;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002405840.1,GeneID:7146529;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405840.1;transl_table=11
NC_011748.1	RefSeq	gene	5078693	5079376	.	-	.	ID=gene5066;Name=yjiH;Dbxref=GeneID:7149211;gbkey=Gene;gene=yjiH;locus_tag=EC55989_4996
NC_011748.1	RefSeq	CDS	5078693	5079376	.	-	0	ID=cds4693;Name=YP_002405841.1;Parent=gene5066;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002405841.1,GeneID:7149211;gbkey=CDS;product=inner membrane protein;protein_id=YP_002405841.1;transl_table=11
NC_011748.1	RefSeq	gene	5079626	5080180	.	+	.	ID=gene5067;Name=kptA;Dbxref=GeneID:7149212;gbkey=Gene;gene=kptA;locus_tag=EC55989_4997
NC_011748.1	RefSeq	CDS	5079626	5080180	.	+	0	ID=cds4694;Name=YP_002405842.1;Parent=gene5067;Note=in yeast cells this enzyme removes the 2%27-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP-ribose 1%27%27-2%27%27-cyclic phosphate%3B functions in tRNA splicing%3B the function and substrate of bacterial enzymes in organisms that do not perform splicing is unknown;Dbxref=Genbank:YP_002405842.1,GeneID:7149212;gbkey=CDS;product=RNA 2%27-phosphotransferase-like protein;protein_id=YP_002405842.1;transl_table=11
NC_011748.1	RefSeq	gene	5080193	5081371	.	-	.	ID=gene5068;Name=yjiJ;Dbxref=GeneID:7146672;gbkey=Gene;gene=yjiJ;locus_tag=EC55989_4998
NC_011748.1	RefSeq	CDS	5080193	5081371	.	-	0	ID=cds4695;Name=YP_002405843.1;Parent=gene5068;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002405843.1,GeneID:7146672;gbkey=CDS;product=inner membrane protein;protein_id=YP_002405843.1;transl_table=11
NC_011748.1	RefSeq	gene	5081439	5082299	.	-	.	ID=gene5069;Name=yjiK;Dbxref=GeneID:7149213;gbkey=Gene;gene=yjiK;locus_tag=EC55989_4999
NC_011748.1	RefSeq	CDS	5081439	5082299	.	-	0	ID=cds4696;Name=YP_002405844.1;Parent=gene5069;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002405844.1,GeneID:7149213;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405844.1;transl_table=11
NC_011748.1	RefSeq	gene	5082364	5082621	.	-	.	ID=gene5070;Name=EC55989_5000;Dbxref=GeneID:7149214;gbkey=Gene;locus_tag=EC55989_5000
NC_011748.1	RefSeq	CDS	5082364	5082621	.	-	0	ID=cds4697;Name=YP_002405845.1;Parent=gene5070;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405845.1,GeneID:7149214;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405845.1;transl_table=11
NC_011748.1	RefSeq	gene	5082618	5083385	.	-	.	ID=gene5071;Name=hgdC;Dbxref=GeneID:7145277;gbkey=Gene;gene=hgdC;locus_tag=EC55989_5001
NC_011748.1	RefSeq	CDS	5082618	5083385	.	-	0	ID=cds4698;Name=YP_002405846.1;Parent=gene5071;Note=Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism%3B PubMedId : 8365476%2C 7607244%2C 15654892%3B Product type e : enzyme;Dbxref=Genbank:YP_002405846.1,GeneID:7145277;gbkey=CDS;product=ATPase%2C activator of %28R%29-hydroxyglutaryl-CoA dehydratase;protein_id=YP_002405846.1;transl_table=11
NC_011748.1	RefSeq	gene	5083395	5084546	.	-	.	ID=gene5072;Name=yjiM;Dbxref=GeneID:7146425;gbkey=Gene;gene=yjiM;locus_tag=EC55989_5002
NC_011748.1	RefSeq	CDS	5083395	5084546	.	-	0	ID=cds4699;Name=YP_002405847.1;Parent=gene5072;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 3691501%2C 11106419%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002405847.1,GeneID:7146425;gbkey=CDS;product=2-hydroxyglutaryl-CoA dehydratase;protein_id=YP_002405847.1;transl_table=11
NC_011748.1	RefSeq	gene	5084662	5085942	.	-	.	ID=gene5073;Name=yjiN;Dbxref=GeneID:7149215;gbkey=Gene;gene=yjiN;locus_tag=EC55989_5003
NC_011748.1	RefSeq	CDS	5084662	5085942	.	-	0	ID=cds4700;Name=YP_002405848.1;Parent=gene5073;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002405848.1,GeneID:7149215;gbkey=CDS;product=inner membrane protein;protein_id=YP_002405848.1;transl_table=11
NC_011748.1	RefSeq	gene	5085983	5087215	.	-	.	ID=gene5074;Name=yjiO;Dbxref=GeneID:7149216;gbkey=Gene;gene=yjiO;locus_tag=EC55989_5004
NC_011748.1	RefSeq	CDS	5085983	5087215	.	-	0	ID=cds4701;Name=YP_002405849.1;Parent=gene5074;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 21450803%3B Product type t : transporter;Dbxref=Genbank:YP_002405849.1,GeneID:7149216;gbkey=CDS;product=multidrug efflux system protein;protein_id=YP_002405849.1;transl_table=11
NC_011748.1	RefSeq	gene	5087682	5088638	.	+	.	ID=gene5075;Name=EC55989_5005;Dbxref=GeneID:7149217;gbkey=Gene;locus_tag=EC55989_5005
NC_011748.1	RefSeq	CDS	5087682	5088638	.	+	0	ID=cds4702;Name=YP_002405850.1;Parent=gene5075;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405850.1,GeneID:7149217;gbkey=CDS;product=transposase;protein_id=YP_002405850.1;transl_table=11
NC_011748.1	RefSeq	gene	5088881	5090293	.	-	.	ID=gene5076;Name=yjiR;Dbxref=GeneID:7145278;gbkey=Gene;gene=yjiR;locus_tag=EC55989_5006
NC_011748.1	RefSeq	CDS	5088881	5090293	.	-	0	ID=cds4703;Name=YP_002405851.1;Parent=gene5076;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pr :  regulator;Dbxref=Genbank:YP_002405851.1,GeneID:7145278;gbkey=CDS;product=fused DNA-binding transcriptional regulator %3B aminotransferase;protein_id=YP_002405851.1;transl_table=11
NC_011748.1	RefSeq	gene	5090731	5091447	.	+	.	ID=gene5077;Name=EC55989_5007;Dbxref=GeneID:7149218;gbkey=Gene;locus_tag=EC55989_5007;pseudo=true
NC_011748.1	RefSeq	region	5090731	5091447	.	+	.	ID=id429;Note=fragment of conserved hypothetical protein %28part 1%29%3BEvidence 7 : Gene remnant;Dbxref=GeneID:7149218;gbkey=misc_feature
NC_011748.1	RefSeq	gene	5091454	5092824	.	+	.	ID=gene5078;Name=EC55989_5008;Dbxref=GeneID:7145279;gbkey=Gene;locus_tag=EC55989_5008;pseudo=true
NC_011748.1	RefSeq	region	5091454	5092824	.	+	.	ID=id430;Note=fragment of conserved hypothetical protein %28part 2%29%3BEvidence 7 : Gene remnant;Dbxref=GeneID:7145279;gbkey=misc_feature
NC_011748.1	RefSeq	gene	5092871	5093212	.	-	.	ID=gene5079;Name=yjiW;Dbxref=GeneID:7145280;gbkey=Gene;gene=yjiW;locus_tag=EC55989_5009
NC_011748.1	RefSeq	CDS	5092871	5093212	.	-	0	ID=cds4704;Name=YP_002405852.1;Parent=gene5079;Note=involved in the degradation of RNA%3B may be involved in the recycling of RNA during the SOS response;Dbxref=Genbank:YP_002405852.1,GeneID:7145280;gbkey=CDS;product=endoribonuclease SymE;protein_id=YP_002405852.1;transl_table=11
NC_011748.1	RefSeq	gene	5093219	5093283	.	+	.	ID=gene5080;Name=ryjC;Dbxref=GeneID:7149219;gbkey=Gene;gene=ryjC;locus_tag=EC55989_misc_RNA_109
NC_011748.1	RefSeq	transcript	5093219	5093283	.	+	.	ID=rna220;Parent=gene5080;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 15718303%3B Product type n : RNA;Dbxref=GeneID:7149219;gbkey=misc_RNA;product=RyjC
NC_011748.1	RefSeq	exon	5093219	5093283	.	+	.	ID=id431;Parent=rna220;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 15718303%3B Product type n : RNA;Dbxref=GeneID:7149219;gbkey=misc_RNA;product=RyjC
NC_011748.1	RefSeq	gene	5093433	5095169	.	-	.	ID=gene5081;Name=EC55989_5010;Dbxref=GeneID:7147595;gbkey=Gene;locus_tag=EC55989_5010
NC_011748.1	RefSeq	CDS	5093433	5095169	.	-	0	ID=cds4705;Name=YP_002405853.1;Parent=gene5081;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 9837717%2C 10733903%2C 11273713%3B Product type f : factor;Dbxref=Genbank:YP_002405853.1,GeneID:7147595;gbkey=CDS;product=Type I restriction enzyme EcoAI specificity protein %28S protein%29 %28S.EcoAI%29;protein_id=YP_002405853.1;transl_table=11
NC_011748.1	RefSeq	gene	5095169	5096674	.	-	.	ID=gene5082;Name=hsdM;Dbxref=GeneID:7145281;gbkey=Gene;gene=hsdM;locus_tag=EC55989_5011
NC_011748.1	RefSeq	CDS	5095169	5096674	.	-	0	ID=cds4706;Name=YP_002405854.1;Parent=gene5082;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 8412658%2C 1409708%3B Product type e : enzyme;Dbxref=Genbank:YP_002405854.1,GeneID:7145281;gbkey=CDS;product=Type I restriction enzyme EcoEI M protein %28M.EcoEI%29;protein_id=YP_002405854.1;transl_table=11
NC_011748.1	RefSeq	gene	5096705	5099137	.	-	.	ID=gene5083;Name=hsdR;Dbxref=GeneID:7146465;gbkey=Gene;gene=hsdR;locus_tag=EC55989_5012
NC_011748.1	RefSeq	CDS	5096705	5099137	.	-	0	ID=cds4707;Name=YP_002405855.1;Parent=gene5083;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 9837717%2C 10373579%2C 10733903%2C 8412658%3B Product type e : enzyme;Dbxref=Genbank:YP_002405855.1,GeneID:7146465;gbkey=CDS;product=Type I restriction enzyme EcoAI R protein %28R.EcoAI%29;protein_id=YP_002405855.1;transl_table=11
NC_011748.1	RefSeq	gene	5099394	5101067	.	+	.	ID=gene5084;Name=EC55989_5013;Dbxref=GeneID:7146466;gbkey=Gene;locus_tag=EC55989_5013
NC_011748.1	RefSeq	CDS	5099394	5101067	.	+	0	ID=cds4708;Name=YP_002405856.1;Parent=gene5084;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405856.1,GeneID:7146466;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405856.1;transl_table=11
NC_011748.1	RefSeq	gene	5101136	5102092	.	-	.	ID=gene5085;Name=yjiA;Dbxref=GeneID:7145282;gbkey=Gene;gene=yjiA;locus_tag=EC55989_5014
NC_011748.1	RefSeq	CDS	5101136	5102092	.	-	0	ID=cds4709;Name=YP_002405857.1;Parent=gene5085;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B PubMedId : 14696199%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002405857.1,GeneID:7145282;gbkey=CDS;product=GTP-binding protein YjiA;protein_id=YP_002405857.1;transl_table=11
NC_011748.1	RefSeq	gene	5102103	5102432	.	-	.	ID=gene5086;Name=EC55989_5015;Dbxref=GeneID:7149207;gbkey=Gene;locus_tag=EC55989_5015
NC_011748.1	RefSeq	CDS	5102103	5102432	.	-	0	ID=cds4710;Name=YP_002405858.1;Parent=gene5086;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405858.1,GeneID:7149207;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405858.1;transl_table=11
NC_011748.1	RefSeq	gene	5102437	5104587	.	-	.	ID=gene5087;Name=yjiY;Dbxref=GeneID:7145283;gbkey=Gene;gene=yjiY;locus_tag=EC55989_5016
NC_011748.1	RefSeq	CDS	5102437	5104587	.	-	0	ID=cds4711;Name=YP_002405859.1;Parent=gene5087;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002405859.1,GeneID:7145283;gbkey=CDS;product=inner membrane protein;protein_id=YP_002405859.1;transl_table=11
NC_011748.1	RefSeq	gene	5104964	5106628	.	+	.	ID=gene5088;Name=tsr;Dbxref=GeneID:7149220;gbkey=Gene;gene=tsr;locus_tag=EC55989_5017
NC_011748.1	RefSeq	CDS	5104964	5106628	.	+	0	ID=cds4712;Name=YP_002405860.1;Parent=gene5088;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 20015410%2C 89034150%2C 91317710%2C 10466731%2C 2033064%2C 6213619%2C 6402709%2C 8384293%3B Product type r : regulator;Dbxref=Genbank:YP_002405860.1,GeneID:7149220;gbkey=CDS;product=methyl-accepting chemotaxis protein I%2C serine sensor receptor;protein_id=YP_002405860.1;transl_table=11
NC_011748.1	RefSeq	gene	5106677	5108038	.	-	.	ID=gene5089;Name=yjiZ;Dbxref=GeneID:7147867;gbkey=Gene;gene=yjiZ;locus_tag=EC55989_5018
NC_011748.1	RefSeq	CDS	5106677	5108038	.	-	0	ID=cds4713;Name=YP_002405861.1;Parent=gene5089;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pt :  transporter;Dbxref=Genbank:YP_002405861.1,GeneID:7147867;gbkey=CDS;product=transporter;protein_id=YP_002405861.1;transl_table=11
NC_011748.1	RefSeq	gene	5108253	5109167	.	-	.	ID=gene5090;Name=yjjM;Dbxref=GeneID:7149221;gbkey=Gene;gene=yjjM;locus_tag=EC55989_5019
NC_011748.1	RefSeq	CDS	5108253	5109167	.	-	0	ID=cds4714;Name=YP_002405862.1;Parent=gene5090;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pr :  regulator;Dbxref=Genbank:YP_002405862.1,GeneID:7149221;gbkey=CDS;product=DNA-binding transcriptional regulator;protein_id=YP_002405862.1;transl_table=11
NC_011748.1	RefSeq	gene	5109306	5110328	.	+	.	ID=gene5091;Name=yjjN;Dbxref=GeneID:7149226;gbkey=Gene;gene=yjjN;locus_tag=EC55989_5020
NC_011748.1	RefSeq	CDS	5109306	5110328	.	+	0	ID=cds4715;Name=YP_002405863.1;Parent=gene5091;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002405863.1,GeneID:7149226;gbkey=CDS;product=oxidoreductase%2C Zn-dependent and NAD%28P%29-binding;protein_id=YP_002405863.1;transl_table=11
NC_011748.1	RefSeq	gene	5110469	5112760	.	-	.	ID=gene5092;Name=mdoB;Dbxref=GeneID:7149227;gbkey=Gene;gene=mdoB;locus_tag=EC55989_5021
NC_011748.1	RefSeq	CDS	5110469	5112760	.	-	0	ID=cds4716;Name=YP_002405864.1;Parent=gene5092;Note=catalyzes the transfer of phosphoglycerol to the glucan backbone;Dbxref=Genbank:YP_002405864.1,GeneID:7149227;gbkey=CDS;product=phosphoglycerol transferase I;protein_id=YP_002405864.1;transl_table=11
NC_011748.1	RefSeq	gene	5113014	5113508	.	-	.	ID=gene5093;Name=yjjA;Dbxref=GeneID:7146797;gbkey=Gene;gene=yjjA;locus_tag=EC55989_5022
NC_011748.1	RefSeq	CDS	5113014	5113508	.	-	0	ID=cds4717;Name=YP_002405865.1;Parent=gene5093;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405865.1,GeneID:7146797;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405865.1;transl_table=11
NC_011748.1	RefSeq	gene	5113557	5114294	.	-	.	ID=gene5094;Name=dnaC;Dbxref=GeneID:7149222;gbkey=Gene;gene=dnaC;locus_tag=EC55989_5023
NC_011748.1	RefSeq	CDS	5113557	5114294	.	-	0	ID=cds4718;Name=YP_002405866.1;Parent=gene5094;Note=acts to load the DnaB helicase onto the initiation site during DNA replication;Dbxref=Genbank:YP_002405866.1,GeneID:7149222;gbkey=CDS;product=DNA replication protein DnaC;protein_id=YP_002405866.1;transl_table=11
NC_011748.1	RefSeq	gene	5114297	5114836	.	-	.	ID=gene5095;Name=dnaT;Dbxref=GeneID:7145934;gbkey=Gene;gene=dnaT;locus_tag=EC55989_5024
NC_011748.1	RefSeq	CDS	5114297	5114836	.	-	0	ID=cds4719;Name=YP_002405867.1;Parent=gene5095;Note=This protein is required for primosome-dependent normal DNA replication%3B it is also involved in inducing stable DNA replication during SOS response. It forms%2C in concert with dnaB protein and other prepriming proteins dnaC%2C N%2C N%27%2C N%27%27 a prepriming protein complex on the specific site of the template DNA recognized by protein N%27;Dbxref=Genbank:YP_002405867.1,GeneID:7145934;gbkey=CDS;product=primosomal protein DnaI;protein_id=YP_002405867.1;transl_table=11
NC_011748.1	RefSeq	gene	5114943	5115416	.	-	.	ID=gene5096;Name=EC55989_5025;Dbxref=GeneID:7145941;gbkey=Gene;locus_tag=EC55989_5025
NC_011748.1	RefSeq	CDS	5114943	5115416	.	-	0	ID=cds4720;Name=YP_002405868.2;Parent=gene5096;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405868.2,GeneID:7145941;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405868.2;transl_table=11
NC_011748.1	RefSeq	gene	5115407	5116177	.	-	.	ID=gene5097;Name=yjjP;Dbxref=GeneID:7145284;gbkey=Gene;gene=yjjP;locus_tag=EC55989_5026
NC_011748.1	RefSeq	CDS	5115407	5116177	.	-	0	ID=cds4721;Name=YP_002405869.1;Parent=gene5097;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B Product type pm :  membrane component;Dbxref=Genbank:YP_002405869.1,GeneID:7145284;gbkey=CDS;product=inner membrane protein;protein_id=YP_002405869.1;transl_table=11
NC_011748.1	RefSeq	gene	5116798	5117523	.	+	.	ID=gene5098;Name=yjjQ;Dbxref=GeneID:7149228;gbkey=Gene;gene=yjjQ;locus_tag=EC55989_5027
NC_011748.1	RefSeq	CDS	5116798	5117523	.	+	0	ID=cds4722;Name=YP_002405870.1;Parent=gene5098;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pr :  regulator;Dbxref=Genbank:YP_002405870.1,GeneID:7149228;gbkey=CDS;product=DNA-binding transcriptional regulator;protein_id=YP_002405870.1;transl_table=11
NC_011748.1	RefSeq	gene	5117535	5118158	.	+	.	ID=gene5099;Name=bglJ;Dbxref=GeneID:7149229;gbkey=Gene;gene=bglJ;locus_tag=EC55989_5028
NC_011748.1	RefSeq	CDS	5117535	5118158	.	+	0	ID=cds4723;Name=YP_002405871.1;Parent=gene5099;Note=regulator for the transport and utilization of the aromatic beta-glucosides arbutin and silicin;Dbxref=Genbank:YP_002405871.1,GeneID:7149229;gbkey=CDS;product=DNA-binding transcriptional activator BglJ;protein_id=YP_002405871.1;transl_table=11
NC_011748.1	RefSeq	gene	5118196	5118984	.	-	.	ID=gene5100;Name=fhuF;Dbxref=GeneID:7145622;gbkey=Gene;gene=fhuF;locus_tag=EC55989_5029
NC_011748.1	RefSeq	CDS	5118196	5118984	.	-	0	ID=cds4724;Name=YP_002405872.1;Parent=gene5100;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 11931550%2C 14756576%2C 3323834%2C 9990318%3B Product type c : carrier;Dbxref=Genbank:YP_002405872.1,GeneID:7145622;gbkey=CDS;product=ferric hydroximate transport ferric iron reductase;protein_id=YP_002405872.1;transl_table=11
NC_011748.1	RefSeq	gene	5119014	5119361	.	+	.	ID=gene5101;Name=EC55989_5030;Dbxref=GeneID:7146104;gbkey=Gene;locus_tag=EC55989_5030
NC_011748.1	RefSeq	CDS	5119014	5119361	.	+	0	ID=cds4725;Name=YP_002405873.1;Parent=gene5101;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405873.1,GeneID:7146104;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405873.1;transl_table=11
NC_011748.1	RefSeq	gene	5119400	5119486	.	-	.	ID=gene5102;Name=EC55989_tRNA58;Dbxref=GeneID:7145285;gbkey=Gene;locus_tag=EC55989_tRNA58
NC_011748.1	RefSeq	tRNA	5119400	5119486	.	-	.	ID=rna221;Dbxref=GeneID:7145285;gbkey=tRNA;product=tRNA-Leu
NC_011748.1	RefSeq	exon	5119400	5119486	.	-	.	ID=id432;Parent=rna221;Dbxref=GeneID:7145285;gbkey=tRNA;product=tRNA-Leu
NC_011748.1	RefSeq	gene	5119521	5119607	.	-	.	ID=gene5103;Name=EC55989_tRNA57;Dbxref=GeneID:7145370;gbkey=Gene;locus_tag=EC55989_tRNA57
NC_011748.1	RefSeq	tRNA	5119521	5119607	.	-	.	ID=rna222;Dbxref=GeneID:7145370;gbkey=tRNA;product=tRNA-Leu
NC_011748.1	RefSeq	exon	5119521	5119607	.	-	.	ID=id433;Parent=rna222;Dbxref=GeneID:7145370;gbkey=tRNA;product=tRNA-Leu
NC_011748.1	RefSeq	gene	5119636	5119722	.	-	.	ID=gene5104;Name=EC55989_tRNA56;Dbxref=GeneID:7145369;gbkey=Gene;locus_tag=EC55989_tRNA56
NC_011748.1	RefSeq	tRNA	5119636	5119722	.	-	.	ID=rna223;Dbxref=GeneID:7145369;gbkey=tRNA;product=tRNA-Leu
NC_011748.1	RefSeq	exon	5119636	5119722	.	-	.	ID=id434;Parent=rna223;Dbxref=GeneID:7145369;gbkey=tRNA;product=tRNA-Leu
NC_011748.1	RefSeq	gene	5120031	5121062	.	-	.	ID=gene5105;Name=rsmC;Dbxref=GeneID:7145368;gbkey=Gene;gene=rsmC;locus_tag=EC55989_5032
NC_011748.1	RefSeq	CDS	5120031	5121062	.	-	0	ID=cds4726;Name=YP_002405874.1;Parent=gene5105;Note=16S rRNA M2G1207 methyltransferase%3B one of many enzymes that modify bases of the ribosomal RNA%3B this enzyme methylates the G at position 1207 of the small ribosomal subunit;Dbxref=Genbank:YP_002405874.1,GeneID:7145368;gbkey=CDS;product=16S ribosomal RNA m2G1207 methyltransferase;protein_id=YP_002405874.1;transl_table=11
NC_011748.1	RefSeq	gene	5121165	5121578	.	+	.	ID=gene5106;Name=holD;Dbxref=GeneID:7147536;gbkey=Gene;gene=holD;locus_tag=EC55989_5033
NC_011748.1	RefSeq	CDS	5121165	5121578	.	+	0	ID=cds4727;Name=YP_002405875.1;Parent=gene5106;Note=with the chi subunit binds to single-strand binding %28SSB%29 protein and acts as a bridge between the DnaX clamp loader complex and the SSB;Dbxref=Genbank:YP_002405875.1,GeneID:7147536;gbkey=CDS;product=DNA polymerase III subunit psi;protein_id=YP_002405875.1;transl_table=11
NC_011748.1	RefSeq	gene	5121547	5121993	.	+	.	ID=gene5107;Name=rimI;Dbxref=GeneID:7146456;gbkey=Gene;gene=rimI;locus_tag=EC55989_5034
NC_011748.1	RefSeq	CDS	5121547	5121993	.	+	0	ID=cds4728;Name=YP_002405876.1;Parent=gene5107;Note=alanine acetyltransferase that specifically acetylates ribosomal protein S18;Dbxref=Genbank:YP_002405876.1,GeneID:7146456;gbkey=CDS;product=ribosomal-protein-alanine N-acetyltransferase;protein_id=YP_002405876.1;transl_table=11
NC_011748.1	RefSeq	gene	5122008	5122685	.	+	.	ID=gene5108;Name=yjjG;Dbxref=GeneID:7147418;gbkey=Gene;gene=yjjG;locus_tag=EC55989_5035
NC_011748.1	RefSeq	CDS	5122008	5122685	.	+	0	ID=cds4729;Name=YP_002405877.1;Parent=gene5108;Note=manganese-dependent 5%27-nucleotidase%3B specific for 5%27-UMP%2C 5%27-dUMP%2C and 5%27-dTMP%3B member of haloacid dehalogenase %28HAD%29-like hydrolase superfamily;Dbxref=Genbank:YP_002405877.1,GeneID:7147418;gbkey=CDS;product=nucleotidase;protein_id=YP_002405877.1;transl_table=11
NC_011748.1	RefSeq	gene	5122776	5124365	.	+	.	ID=gene5109;Name=prfC;Dbxref=GeneID:7149223;gbkey=Gene;gene=prfC;locus_tag=EC55989_5036
NC_011748.1	RefSeq	CDS	5122776	5124365	.	+	0	ID=cds4730;Name=YP_002405878.1;Parent=gene5109;Note=stimulates the release of release factors 1 and 2 from the ribosome after hydrolysis of the ester bond in peptidyl-tRNA has occurred%3B GDP%2FGTP-binding protein;Dbxref=Genbank:YP_002405878.1,GeneID:7149223;gbkey=CDS;product=peptide chain release factor 3;protein_id=YP_002405878.1;transl_table=11
NC_011748.1	RefSeq	gene	5124758	5125363	.	+	.	ID=gene5110;Name=osmY;Dbxref=GeneID:7147242;gbkey=Gene;gene=osmY;locus_tag=EC55989_5037
NC_011748.1	RefSeq	CDS	5124758	5125363	.	+	0	ID=cds4731;Name=YP_002405879.1;Parent=gene5110;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 1317380%2C 8253679%2C 9298646%2C 9600841%3B Product type cp : cell process;Dbxref=Genbank:YP_002405879.1,GeneID:7147242;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405879.1;transl_table=11
NC_011748.1	RefSeq	gene	5125472	5125651	.	+	.	ID=gene5111;Name=ytjA;Dbxref=GeneID:7147084;gbkey=Gene;gene=ytjA;locus_tag=EC55989_5038
NC_011748.1	RefSeq	CDS	5125472	5125651	.	+	0	ID=cds4732;Name=YP_002405880.1;Parent=gene5111;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405880.1,GeneID:7147084;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405880.1;transl_table=11
NC_011748.1	RefSeq	gene	5125773	5126846	.	+	.	ID=gene5112;Name=yjjU;Dbxref=GeneID:7149483;gbkey=Gene;gene=yjjU;locus_tag=EC55989_5039
NC_011748.1	RefSeq	CDS	5125773	5126846	.	+	0	ID=cds4733;Name=YP_002405881.1;Parent=gene5112;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002405881.1,GeneID:7149483;gbkey=CDS;product=esterase;protein_id=YP_002405881.1;transl_table=11
NC_011748.1	RefSeq	gene	5126843	5127625	.	+	.	ID=gene5113;Name=yjjV;Dbxref=GeneID:7149230;gbkey=Gene;gene=yjjV;locus_tag=EC55989_5040
NC_011748.1	RefSeq	CDS	5126843	5127625	.	+	0	ID=cds4734;Name=YP_002405882.1;Parent=gene5113;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002405882.1,GeneID:7149230;gbkey=CDS;product=deoxyribonuclease YjjV;protein_id=YP_002405882.1;transl_table=11
NC_011748.1	RefSeq	gene	5127855	5128718	.	-	.	ID=gene5114;Name=yjjW;Dbxref=GeneID:7149231;gbkey=Gene;gene=yjjW;locus_tag=EC55989_5041
NC_011748.1	RefSeq	CDS	5127855	5128718	.	-	0	ID=cds4735;Name=YP_002405883.1;Parent=gene5114;Note=Evidence 3 : Function proposed based on presence of conserved amino acid motif%2C structural feature or limited homology%3B Product type pe :  enzyme;Dbxref=Genbank:YP_002405883.1,GeneID:7149231;gbkey=CDS;product=pyruvate formate lyase activating enzyme;protein_id=YP_002405883.1;transl_table=11
NC_011748.1	RefSeq	gene	5128690	5130240	.	-	.	ID=gene5115;Name=yjjI;Dbxref=GeneID:7149232;gbkey=Gene;gene=yjjI;locus_tag=EC55989_5042
NC_011748.1	RefSeq	CDS	5128690	5130240	.	-	0	ID=cds4736;Name=YP_002405884.1;Parent=gene5115;Note=Evidence 4 : Homologs of previously reported genes of unknown function;Dbxref=Genbank:YP_002405884.1,GeneID:7149232;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405884.1;transl_table=11
NC_011748.1	RefSeq	gene	5130498	5131277	.	+	.	ID=gene5116;Name=deoC;Dbxref=GeneID:7149224;gbkey=Gene;gene=deoC;locus_tag=EC55989_5043
NC_011748.1	RefSeq	CDS	5130498	5131277	.	+	0	ID=cds4737;Name=YP_002405885.1;Parent=gene5116;Note=catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate;Dbxref=Genbank:YP_002405885.1,GeneID:7149224;gbkey=CDS;product=deoxyribose-phosphate aldolase;protein_id=YP_002405885.1;transl_table=11
NC_011748.1	RefSeq	gene	5131355	5132677	.	+	.	ID=gene5117;Name=deoA;Dbxref=GeneID:7145884;gbkey=Gene;gene=deoA;locus_tag=EC55989_5044
NC_011748.1	RefSeq	CDS	5131355	5132677	.	+	0	ID=cds4738;Name=YP_002405886.1;Parent=gene5117;Note=Catalyzes the reversible phosphorolysis of thymidine%2C deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate;Dbxref=Genbank:YP_002405886.1,GeneID:7145884;gbkey=CDS;product=thymidine phosphorylase;protein_id=YP_002405886.1;transl_table=11
NC_011748.1	RefSeq	gene	5132729	5133952	.	+	.	ID=gene5118;Name=deoB;Dbxref=GeneID:7145882;gbkey=Gene;gene=deoB;locus_tag=EC55989_5045
NC_011748.1	RefSeq	CDS	5132729	5133952	.	+	0	ID=cds4739;Name=YP_002405887.1;Parent=gene5118;Note=catalyzes the transfer of phosphate between the C1 and C5 carbons of pentose;Dbxref=Genbank:YP_002405887.1,GeneID:7145882;gbkey=CDS;product=phosphopentomutase;protein_id=YP_002405887.1;transl_table=11
NC_011748.1	RefSeq	gene	5134032	5134751	.	+	.	ID=gene5119;Name=deoD;Dbxref=GeneID:7145883;gbkey=Gene;gene=deoD;locus_tag=EC55989_5046
NC_011748.1	RefSeq	CDS	5134032	5134751	.	+	0	ID=cds4740;Name=YP_002405888.1;Parent=gene5119;Note=catalyzes the reversible phosphorolysis of ribonucleosides and 2%27- deoxyribonucleosides to the free base and %282%27-deoxy%29ribose-1- phosphate;Dbxref=Genbank:YP_002405888.1,GeneID:7145883;gbkey=CDS;product=purine nucleoside phosphorylase;protein_id=YP_002405888.1;transl_table=11
NC_011748.1	RefSeq	gene	5135026	5135175	.	-	.	ID=gene5120;Name=EC55989_5047;Dbxref=GeneID:7145885;gbkey=Gene;locus_tag=EC55989_5047;pseudo=true
NC_011748.1	RefSeq	region	5135026	5135175	.	-	.	ID=id435;Note=fragment of   transcriptionnal regulator %28partial%29%3BEvidence 7 : Gene remnant;Dbxref=GeneID:7145885;gbkey=misc_feature
NC_011748.1	RefSeq	gene	5135207	5136223	.	-	.	ID=gene5121;Name=lplA;Dbxref=GeneID:7145286;gbkey=Gene;gene=lplA;locus_tag=EC55989_5048
NC_011748.1	RefSeq	CDS	5135207	5136223	.	-	0	ID=cds4741;Name=YP_002405889.1;Parent=gene5121;Note=Catalyzes both the ATP-dependent activation of exogenously supplied lipoate to lipoyl-AMP and the transfer of the activated lipoyl on the lipoate-dependent enzymes. Creates an amide linkage that joins the free carboxyl group of lipoic acid to the epsilon-amino group of a specific lysine residue in lipoyl domain of apoproteins;Dbxref=Genbank:YP_002405889.1,GeneID:7145286;gbkey=CDS;product=lipoate-protein ligase A;protein_id=YP_002405889.1;transl_table=11
NC_011748.1	RefSeq	gene	5136251	5136895	.	-	.	ID=gene5122;Name=ytjB;Dbxref=GeneID:7146731;gbkey=Gene;gene=ytjB;locus_tag=EC55989_5049
NC_011748.1	RefSeq	CDS	5136251	5136895	.	-	0	ID=cds4742;Name=YP_002405890.1;Parent=gene5122;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 2684780;Dbxref=Genbank:YP_002405890.1,GeneID:7146731;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405890.1;transl_table=11
NC_011748.1	RefSeq	gene	5137001	5137969	.	+	.	ID=gene5123;Name=serB;Dbxref=GeneID:7149484;gbkey=Gene;gene=serB;locus_tag=EC55989_5050
NC_011748.1	RefSeq	CDS	5137001	5137969	.	+	0	ID=cds4743;Name=YP_002405891.1;Parent=gene5123;Note=catalyzes the formation of serine from O-phosphoserine;Dbxref=Genbank:YP_002405891.1,GeneID:7149484;gbkey=CDS;product=phosphoserine phosphatase;protein_id=YP_002405891.1;transl_table=11
NC_011748.1	RefSeq	gene	5138018	5139400	.	+	.	ID=gene5124;Name=radA;Dbxref=GeneID:7147633;gbkey=Gene;gene=radA;locus_tag=EC55989_5051
NC_011748.1	RefSeq	CDS	5138018	5139400	.	+	0	ID=cds4744;Name=YP_002405892.1;Parent=gene5124;Note=Sms%3B stabilizes the strand-invasion intermediate during the DNA repair%3B involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents;Dbxref=Genbank:YP_002405892.1,GeneID:7147633;gbkey=CDS;product=DNA repair protein RadA;protein_id=YP_002405892.1;transl_table=11
NC_011748.1	RefSeq	gene	5139421	5140653	.	+	.	ID=gene5125;Name=nadR;Dbxref=GeneID:7147335;gbkey=Gene;gene=nadR;locus_tag=EC55989_5052
NC_011748.1	RefSeq	CDS	5139421	5140653	.	+	0	ID=cds4745;Name=YP_002405893.1;Parent=gene5125;Note=catalyzes the formation of NAD%28%2B%29 from nicotinamide ribonucleotide;Dbxref=Genbank:YP_002405893.1,GeneID:7147335;gbkey=CDS;product=nicotinamide-nucleotide adenylyltransferase;protein_id=YP_002405893.1;transl_table=11
NC_011748.1	RefSeq	gene	5140960	5142627	.	-	.	ID=gene5126;Name=yjjK;Dbxref=GeneID:7146947;gbkey=Gene;gene=yjjK;locus_tag=EC55989_5053
NC_011748.1	RefSeq	CDS	5140960	5142627	.	-	0	ID=cds4746;Name=YP_002405894.1;Parent=gene5126;Note=ChvD%3B in Agrobacterium tumefaciens%2C mutations in both Walker boxes were found to affect virulence;Dbxref=Genbank:YP_002405894.1,GeneID:7146947;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=YP_002405894.1;transl_table=11
NC_011748.1	RefSeq	gene	5142838	5144775	.	+	.	ID=gene5127;Name=slt;Dbxref=GeneID:7149225;gbkey=Gene;gene=slt;locus_tag=EC55989_5054
NC_011748.1	RefSeq	CDS	5142838	5144775	.	+	0	ID=cds4747;Name=YP_002405895.1;Parent=gene5127;Note=catalyzes the cleavage of the glycosidic bonds between N-acetylmuramic acid and N-acetylglucosamine residues in peptidoglycan;Dbxref=Genbank:YP_002405895.1,GeneID:7149225;gbkey=CDS;product=lytic murein transglycosylase;protein_id=YP_002405895.1;transl_table=11
NC_011748.1	RefSeq	gene	5144865	5145191	.	+	.	ID=gene5128;Name=trpR;Dbxref=GeneID:7147661;gbkey=Gene;gene=trpR;locus_tag=EC55989_5055
NC_011748.1	RefSeq	CDS	5144865	5145191	.	+	0	ID=cds4748;Name=YP_002405896.1;Parent=gene5128;Note=When complexed with L-tryptophan it binds the operator region of the trp operon and prevents the initiation of transcription;Dbxref=Genbank:YP_002405896.1,GeneID:7147661;gbkey=CDS;product=Trp operon repressor;protein_id=YP_002405896.1;transl_table=11
NC_011748.1	RefSeq	gene	5145233	5145745	.	-	.	ID=gene5129;Name=yjjX;Dbxref=GeneID:7147856;gbkey=Gene;gene=yjjX;locus_tag=EC55989_5056
NC_011748.1	RefSeq	CDS	5145233	5145745	.	-	0	ID=cds4749;Name=YP_002405897.1;Parent=gene5129;Note=pyrophosphatase%3B has activity against dUTP and dITP%3B the crystal structure of the Vibrio protein showed similarity to Methanococcus janaschii Mj0226%3B in Vibrio cholerae this gene is part of the Mba operon that is involved in regulation and maintenance of biofilms%3B in Escherichia coli overexpression of this gene leads to resistance to an HMP analog;Dbxref=Genbank:YP_002405897.1,GeneID:7147856;gbkey=CDS;product=NTPase;protein_id=YP_002405897.1;transl_table=11
NC_011748.1	RefSeq	gene	5145797	5146444	.	+	.	ID=gene5130;Name=ytjC;Dbxref=GeneID:7149233;gbkey=Gene;gene=ytjC;locus_tag=EC55989_5057
NC_011748.1	RefSeq	CDS	5145797	5146444	.	+	0	ID=cds4750;Name=YP_002405898.1;Parent=gene5130;Note=catalyzes reactions involving the transfer of phospho groups between the three carbon atoms of phosphoglycerate;Dbxref=Genbank:YP_002405898.1,GeneID:7149233;gbkey=CDS;product=phosphoglycerate mutase;protein_id=YP_002405898.1;transl_table=11
NC_011748.1	RefSeq	gene	5146441	5147310	.	-	.	ID=gene5131;Name=rob;Dbxref=GeneID:7149485;gbkey=Gene;gene=rob;locus_tag=EC55989_5058
NC_011748.1	RefSeq	CDS	5146441	5147310	.	-	0	ID=cds4751;Name=YP_002405899.1;Parent=gene5131;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 20264525%2C 20309711%2C 93194823%2C 96405618%2C 8449900%3B Product type r : regulator;Dbxref=Genbank:YP_002405899.1,GeneID:7149485;gbkey=CDS;product=DNA-binding transcriptional activator;protein_id=YP_002405899.1;transl_table=11
NC_011748.1	RefSeq	gene	5147521	5147994	.	+	.	ID=gene5132;Name=creA;Dbxref=GeneID:7147457;gbkey=Gene;gene=creA;locus_tag=EC55989_5059
NC_011748.1	RefSeq	CDS	5147521	5147994	.	+	0	ID=cds4752;Name=YP_002405900.1;Parent=gene5132;Note=Evidence 4 : Homologs of previously reported genes of unknown function%3B PubMedId : 3531171%2C 8449900;Dbxref=Genbank:YP_002405900.1,GeneID:7147457;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405900.1;transl_table=11
NC_011748.1	RefSeq	gene	5148007	5148696	.	+	.	ID=gene5133;Name=creB;Dbxref=GeneID:7145753;gbkey=Gene;gene=creB;locus_tag=EC55989_5060
NC_011748.1	RefSeq	CDS	5148007	5148696	.	+	0	ID=cds4753;Name=YP_002405901.1;Parent=gene5133;Note=response regulator in two-component regulatory system with CreC%3B CreB protein is phosphorylated by sensor protein phospho-CreC%3B involved in catabolic regulation;Dbxref=Genbank:YP_002405901.1,GeneID:7145753;gbkey=CDS;product=DNA-binding response regulator CreB;protein_id=YP_002405901.1;transl_table=11
NC_011748.1	RefSeq	gene	5148696	5150120	.	+	.	ID=gene5134;Name=creC;Dbxref=GeneID:7145754;gbkey=Gene;gene=creC;locus_tag=EC55989_5061
NC_011748.1	RefSeq	CDS	5148696	5150120	.	+	0	ID=cds4754;Name=YP_002405902.1;Parent=gene5134;Note=part of a two-component regulatory system with CreB or PhoB%3B involved in catabolic regulation;Dbxref=Genbank:YP_002405902.1,GeneID:7145754;gbkey=CDS;product=sensory histidine kinase CreC;protein_id=YP_002405902.1;transl_table=11
NC_011748.1	RefSeq	gene	5150178	5151530	.	+	.	ID=gene5135;Name=creD;Dbxref=GeneID:7145755;gbkey=Gene;gene=creD;locus_tag=EC55989_5062
NC_011748.1	RefSeq	CDS	5150178	5151530	.	+	0	ID=cds4755;Name=YP_002405903.1;Parent=gene5135;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 88216172%2C 2835585%2C 2984198%2C 3531171%3B Product type m : membrane component;Dbxref=Genbank:YP_002405903.1,GeneID:7145755;gbkey=CDS;product=hypothetical protein;protein_id=YP_002405903.1;transl_table=11
NC_011748.1	RefSeq	gene	5151590	5152306	.	-	.	ID=gene5136;Name=arcA;Dbxref=GeneID:7145756;gbkey=Gene;gene=arcA;locus_tag=EC55989_5063
NC_011748.1	RefSeq	CDS	5151590	5152306	.	-	0	ID=cds4756;Name=YP_002405904.1;Parent=gene5136;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 15028693%2C 21167794%2C 21317451%2C 91008980%2C 91358353%2C 92380937%2C 9514749%2C 9632255%2C 2984198%2C 7565118%2C 9298646%3B Product type r : regulator;Dbxref=Genbank:YP_002405904.1,GeneID:7145756;gbkey=CDS;product=two-component response regulator;protein_id=YP_002405904.1;transl_table=11
NC_011748.1	RefSeq	gene	5152427	5153578	.	-	.	ID=gene5137;Name=insI;Dbxref=GeneID:7145522;gbkey=Gene;gene=insI;locus_tag=EC55989_5064
NC_011748.1	RefSeq	CDS	5152427	5153578	.	-	0	ID=cds4757;Name=YP_002405905.1;Parent=gene5137;Note=Evidence 1b : Function experimentally demonstrated in the studied species%3B PubMedId : 9689094%2C 6092059%3B Product type e : enzyme;Dbxref=Genbank:YP_002405905.1,GeneID:7145522;gbkey=CDS;product=IS30 transposase%3B KpLE2 phage-like element;protein_id=YP_002405905.1;transl_table=11
NC_011748.1	RefSeq	gene	5153031	5153075	.	+	.	ID=gene5138;Name=RNAC;Dbxref=GeneID:7146598;gbkey=Gene;gene=RNAC;locus_tag=EC55989_misc_RNA_110
NC_011748.1	RefSeq	transcript	5153031	5153075	.	+	.	ID=rna224;Parent=gene5138;Note=Evidence 1c : Function experimentally demonstrated in the studied genus%3B PubMedId : 9461341%3B Product type n : RNA;Dbxref=GeneID:7146598;gbkey=misc_RNA;product=RNAC
NC_011748.1	RefSeq	exon	5153031	5153075	.	+	.	ID=id436;Parent=rna224;Note=Evidence 1c : Function experimentally demonstrated in the studied genus%3B PubMedId : 9461341%3B Product type n : RNA;Dbxref=GeneID:7146598;gbkey=misc_RNA;product=RNAC
NC_011748.1	RefSeq	gene	5154165	5154851	.	+	.	ID=gene5139;Name=yjtD;Dbxref=GeneID:7147433;gbkey=Gene;gene=yjtD;locus_tag=EC55989_5065
NC_011748.1	RefSeq	CDS	5154165	5154851	.	+	0	ID=cds4758;Name=YP_002405906.1;Parent=gene5139;Note=member of the SPOUT superfamily of methyltransferases;Dbxref=Genbank:YP_002405906.1,GeneID:7147433;gbkey=CDS;product=RNA methyltransferase;protein_id=YP_002405906.1;transl_table=11
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