/users/252891/scratch/edge/database/ecoli/results/Ecoli_55989_norepeats.fna /users/252891/scratch/edge/database/ecoli/results/Sflexneri_2002017_norepeats.fna NUCMER [S1] [E1] [S2] [E2] [LEN 1] [LEN 2] [% IDY] [LEN R] [LEN Q] [COV R] [COV Q] [TAGS] 1 1663 19573 21236 1663 1664 98.20 38746 21236 4.29 7.84 Ecoli_55989_1007013_1045758 Sflexneri_2002017_889709_910944 4597 14567 1 9907 9971 9907 98.34 38746 9907 25.73 100.00 Ecoli_55989_1007013_1045758 Sflexneri_2002017_942290_952196 14559 35255 1 20692 20697 20692 98.91 38746 20692 53.42 100.00 Ecoli_55989_1007013_1045758 Sflexneri_2002017_953627_974318 35287 38746 1 3461 3460 3461 98.99 38746 13935 8.93 24.84 Ecoli_55989_1007013_1045758 Sflexneri_2002017_975788_989722 1 10324 3610 13935 10324 10326 98.98 59277 13935 17.42 74.10 Ecoli_55989_1047186_1106462 Sflexneri_2002017_975788_989722 10342 13274 1 2935 2933 2935 98.33 59277 2936 4.95 99.97 Ecoli_55989_1047186_1106462 Sflexneri_2002017_991076_994011 13652 13972 1 321 321 321 100.00 59277 321 0.54 100.00 Ecoli_55989_1047186_1106462 Sflexneri_2002017_994748_995068 14833 37230 1 22400 22398 22400 98.75 59277 22400 37.79 100.00 Ecoli_55989_1047186_1106462 Sflexneri_2002017_995870_1018269 37447 47367 2 9922 9921 9921 99.07 59277 28904 16.74 34.32 Ecoli_55989_1047186_1106462 Sflexneri_2002017_1019333_1048236 51795 52123 861 1192 329 332 84.64 59277 1970 0.56 16.85 Ecoli_55989_1047186_1106462 Sflexneri_2002017_1479428_1481397 52725 53760 5352 4322 1036 1031 93.63 59277 5786 1.75 17.82 Ecoli_55989_1047186_1106462 Sflexneri_2002017_915436_921221 56761 57029 2113 1845 269 269 86.99 59277 5786 0.45 4.65 Ecoli_55989_1047186_1106462 Sflexneri_2002017_915436_921221 58613 58826 908 695 214 214 88.79 59277 3358 0.36 6.37 Ecoli_55989_1047186_1106462 Sflexneri_2002017_2118390_2121747 59036 59277 579 338 242 242 97.52 59277 3358 0.41 7.21 Ecoli_55989_1047186_1106462 Sflexneri_2002017_2118390_2121747 1 158 333 176 158 158 98.73 158 3358 100.00 4.71 Ecoli_55989_1107244_1107401 Sflexneri_2002017_2118390_2121747 1 622 1710 1088 622 623 93.42 2846 2815 21.86 22.13 Ecoli_55989_1109306_1112151 Sflexneri_2002017_2115314_2118128 1953 2402 450 1 450 450 98.89 46114 5535 0.98 8.13 Ecoli_55989_1112994_1159107 Sflexneri_2002017_1631116_1636650 27255 46114 9818 28662 18860 18845 98.42 46114 28904 40.90 65.20 Ecoli_55989_1112994_1159107 Sflexneri_2002017_1019333_1048236 1 250 28655 28904 250 250 99.60 41094 28904 0.61 0.86 Ecoli_55989_1159877_1200970 Sflexneri_2002017_1019333_1048236 267 10766 1 10458 10500 10458 98.11 41094 10460 25.55 99.98 Ecoli_55989_1159877_1200970 Sflexneri_2002017_1049029_1059488 10774 16888 1 6116 6115 6116 96.80 41094 12700 14.88 48.16 Ecoli_55989_1159877_1200970 Sflexneri_2002017_1060271_1072970 16929 23539 6091 12700 6611 6610 98.32 41094 12700 16.09 52.05 Ecoli_55989_1159877_1200970 Sflexneri_2002017_1060271_1072970 30067 33202 1 3130 3136 3130 97.70 41094 4604 7.63 67.98 Ecoli_55989_1159877_1200970 Sflexneri_2002017_1074802_1079405 33344 34688 3261 4604 1345 1344 97.99 41094 4604 3.27 29.19 Ecoli_55989_1159877_1200970 Sflexneri_2002017_1074802_1079405 4 1646 1 1644 1643 1644 99.21 1646 10372 99.82 15.85 Ecoli_55989_1205818_1207463 Sflexneri_2002017_1080669_1091040 1 3737 1 3738 3737 3738 99.04 107202 6829 3.49 54.74 Ecoli_55989_1207798_1314999 Sflexneri_2002017_1130056_1136884 3785 6886 3728 6829 3102 3102 98.94 107202 6829 2.89 45.42 Ecoli_55989_1207798_1314999 Sflexneri_2002017_1130056_1136884 6898 7438 1 541 541 541 98.89 107202 541 0.50 100.00 Ecoli_55989_1207798_1314999 Sflexneri_2002017_1138041_1138581 7445 15884 1 8441 8440 8441 98.66 107202 8441 7.87 100.00 Ecoli_55989_1207798_1314999 Sflexneri_2002017_1139841_1148281 17649 35571 950 18865 17923 17916 99.08 107202 95081 16.72 18.84 Ecoli_55989_1207798_1314999 Sflexneri_2002017_1159550_1254630 35721 36902 18949 20126 1182 1178 97.97 107202 95081 1.10 1.24 Ecoli_55989_1207798_1314999 Sflexneri_2002017_1159550_1254630 37041 82741 20231 65934 45701 45704 98.79 107202 95081 42.63 48.07 Ecoli_55989_1207798_1314999 Sflexneri_2002017_1159550_1254630 84033 89419 65939 71325 5387 5387 98.44 107202 95081 5.03 5.67 Ecoli_55989_1207798_1314999 Sflexneri_2002017_1159550_1254630 89550 90768 71356 72574 1219 1219 99.43 107202 95081 1.14 1.28 Ecoli_55989_1207798_1314999 Sflexneri_2002017_1159550_1254630 90759 98908 86931 95081 8150 8151 98.90 107202 95081 7.60 8.57 Ecoli_55989_1207798_1314999 Sflexneri_2002017_1159550_1254630 104539 107202 1 2665 2664 2665 98.61 107202 9494 2.49 28.07 Ecoli_55989_1207798_1314999 Sflexneri_2002017_1255412_1264905 1 6835 2660 9494 6835 6835 99.24 66418 9494 10.29 71.99 Ecoli_55989_1315771_1382188 Sflexneri_2002017_1255412_1264905 6857 7434 1 566 578 566 96.54 66418 566 0.87 100.00 Ecoli_55989_1315771_1382188 Sflexneri_2002017_1266246_1266811 7430 20251 1 12811 12822 12811 99.08 66418 26566 19.31 48.22 Ecoli_55989_1315771_1382188 Sflexneri_2002017_1268068_1294633 20338 25119 14705 19486 4782 4782 98.56 66418 26566 7.20 18.00 Ecoli_55989_1315771_1382188 Sflexneri_2002017_1268068_1294633 25163 49621 310 24841 24459 24532 98.85 66418 40983 36.83 59.86 Ecoli_55989_1315771_1382188 Sflexneri_2002017_1295414_1336396 49685 58880 24370 33566 9196 9197 99.11 66418 40983 13.85 22.44 Ecoli_55989_1315771_1382188 Sflexneri_2002017_1295414_1336396 59008 66418 33571 40981 7411 7411 98.66 66418 40983 11.16 18.08 Ecoli_55989_1315771_1382188 Sflexneri_2002017_1295414_1336396 1 6768 11 6777 6768 6767 99.56 32270 6777 20.97 99.85 Ecoli_55989_1382402_1414671 Sflexneri_2002017_1336479_1343255 7796 11955 1 4160 4160 4160 99.35 32270 4160 12.89 100.00 Ecoli_55989_1382402_1414671 Sflexneri_2002017_1344717_1348876 11967 21741 1 9775 9775 9775 99.23 32270 9775 30.29 100.00 Ecoli_55989_1382402_1414671 Sflexneri_2002017_1349665_1359439 21746 25835 1 4090 4090 4090 98.75 32270 58564 12.67 6.98 Ecoli_55989_1382402_1414671 Sflexneri_2002017_1360684_1419247 318 1134 1390 573 817 818 88.64 3160 2815 25.85 29.06 Ecoli_55989_1422003_1425162 Sflexneri_2002017_2115314_2118128 719 939 655 435 221 221 93.24 185688 5535 0.12 3.99 Ecoli_55989_1426005_1611692 Sflexneri_2002017_1631116_1636650 3301 3856 1191 1746 556 556 96.40 185688 1746 0.30 31.84 Ecoli_55989_1426005_1611692 Sflexneri_2002017_735432_737177 7372 14104 368 7097 6733 6730 90.42 185688 8209 3.63 81.98 Ecoli_55989_1426005_1611692 Sflexneri_2002017_738842_747050 32300 78235 3970 49893 45936 45924 98.79 185688 58564 24.74 78.42 Ecoli_55989_1426005_1611692 Sflexneri_2002017_1360684_1419247 78362 87031 49895 58564 8670 8670 96.76 185688 58564 4.67 14.80 Ecoli_55989_1426005_1611692 Sflexneri_2002017_1360684_1419247 87044 106445 1 19373 19402 19373 97.54 185688 20775 10.45 93.25 Ecoli_55989_1426005_1611692 Sflexneri_2002017_1420036_1440810 106445 106583 20038 20176 139 139 97.12 185688 20775 0.07 0.67 Ecoli_55989_1426005_1611692 Sflexneri_2002017_1420036_1440810 106600 108141 292 1833 1542 1542 97.80 185688 1833 0.83 84.12 Ecoli_55989_1426005_1611692 Sflexneri_2002017_1442266_1444098 108151 111696 3546 1 3546 3546 98.59 185688 3546 1.91 100.00 Ecoli_55989_1426005_1611692 Sflexneri_2002017_1935753_1939298 111696 114914 5156 1940 3219 3217 98.79 185688 5157 1.73 62.38 Ecoli_55989_1426005_1611692 Sflexneri_2002017_1927528_1932684 120055 120379 1842 1517 325 326 84.40 185688 5157 0.18 6.32 Ecoli_55989_1426005_1611692 Sflexneri_2002017_1927528_1932684 120491 132891 12391 1 12401 12391 98.73 185688 14488 6.68 85.53 Ecoli_55989_1426005_1611692 Sflexneri_2002017_1911355_1925842 132903 138058 1 5156 5156 5156 98.78 185688 5156 2.78 100.00 Ecoli_55989_1426005_1611692 Sflexneri_2002017_1905415_1910570 157816 163296 5480 1 5481 5480 97.37 185688 5480 2.95 100.00 Ecoli_55989_1426005_1611692 Sflexneri_2002017_1899151_1904630 163309 164081 773 1 773 773 97.54 185688 773 0.42 100.00 Ecoli_55989_1426005_1611692 Sflexneri_2002017_1897099_1897871 164098 169644 5550 1 5547 5550 97.37 185688 5555 2.99 99.91 Ecoli_55989_1426005_1611692 Sflexneri_2002017_1890272_1895826 170043 174666 4624 1 4624 4624 98.64 185688 4624 2.49 100.00 Ecoli_55989_1426005_1611692 Sflexneri_2002017_1884370_1888993 174750 185687 10926 1 10938 10926 99.21 185688 10926 5.89 100.00 Ecoli_55989_1426005_1611692 Sflexneri_2002017_1869313_1880238 9496 15302 5807 1 5807 5807 98.93 31364 5807 18.51 100.00 Ecoli_55989_1613438_1644801 Sflexneri_2002017_1860236_1866042 15309 17401 2092 1 2093 2092 98.04 31364 2092 6.67 100.00 Ecoli_55989_1613438_1644801 Sflexneri_2002017_1856801_1858892 4981 11501 6524 1 6521 6524 99.06 139677 6524 4.67 100.00 Ecoli_55989_1645715_1785391 Sflexneri_2002017_1848443_1854966 11504 12756 12657 11405 1253 1253 99.44 139677 12657 0.90 9.90 Ecoli_55989_1645715_1785391 Sflexneri_2002017_1835007_1847663 12751 19040 9865 3580 6290 6286 98.84 139677 12657 4.50 49.66 Ecoli_55989_1645715_1785391 Sflexneri_2002017_1835007_1847663 19040 22450 3403 1 3411 3403 97.66 139677 12657 2.44 26.89 Ecoli_55989_1645715_1785391 Sflexneri_2002017_1835007_1847663 23115 26574 11094 7648 3460 3447 97.51 139677 11094 2.48 31.07 Ecoli_55989_1645715_1785391 Sflexneri_2002017_1823140_1834233 29393 30599 7649 6443 1207 1207 98.34 139677 11094 0.86 10.88 Ecoli_55989_1645715_1785391 Sflexneri_2002017_1823140_1834233 32719 39156 6442 1 6438 6442 98.43 139677 11094 4.61 58.07 Ecoli_55989_1645715_1785391 Sflexneri_2002017_1823140_1834233 39165 41645 2481 1 2481 2481 99.07 139677 2481 1.78 100.00 Ecoli_55989_1645715_1785391 Sflexneri_2002017_1819875_1822355 41658 49036 7367 1 7379 7367 98.58 139677 7367 5.28 100.00 Ecoli_55989_1645715_1785391 Sflexneri_2002017_1811720_1819086 49042 54219 1 5177 5178 5177 98.69 139677 5177 3.71 100.00 Ecoli_55989_1645715_1785391 Sflexneri_2002017_1624212_1629388 60515 60708 1 194 194 194 100.00 139677 7182 0.14 2.70 Ecoli_55989_1645715_1785391 Sflexneri_2002017_1666676_1673857 69302 76110 373 7182 6809 6810 98.19 139677 7182 4.87 94.82 Ecoli_55989_1645715_1785391 Sflexneri_2002017_1666676_1673857 76119 79023 2889 2 2905 2888 98.11 139677 2889 2.08 99.97 Ecoli_55989_1645715_1785391 Sflexneri_2002017_1662648_1665536 79024 84700 12896 7244 5677 5653 98.70 139677 12901 4.06 43.82 Ecoli_55989_1645715_1785391 Sflexneri_2002017_1648066_1660966 86110 90625 7243 2730 4516 4514 98.32 139677 12901 3.23 34.99 Ecoli_55989_1645715_1785391 Sflexneri_2002017_1648066_1660966 96912 97940 2691 1663 1029 1029 99.03 139677 12901 0.74 7.98 Ecoli_55989_1645715_1785391 Sflexneri_2002017_1648066_1660966 97934 98064 1534 1664 131 131 99.24 139677 12901 0.09 1.02 Ecoli_55989_1645715_1785391 Sflexneri_2002017_1648066_1660966 98068 99604 1535 1 1537 1535 99.28 139677 12901 1.10 11.90 Ecoli_55989_1645715_1785391 Sflexneri_2002017_1648066_1660966 100942 108680 7739 1 7739 7739 98.80 139677 7739 5.54 100.00 Ecoli_55989_1645715_1785391 Sflexneri_2002017_1639051_1646789 127200 127649 8209 7754 450 456 85.59 139677 8209 0.32 5.55 Ecoli_55989_1645715_1785391 Sflexneri_2002017_738842_747050 138084 138320 31 267 237 237 86.50 139677 527 0.17 44.97 Ecoli_55989_1645715_1785391 Sflexneri_2002017_2114635_2115161 1 4028 1505 5535 4028 4031 98.11 6095 5535 66.09 72.83 Ecoli_55989_1785568_1791662 Sflexneri_2002017_1631116_1636650 4047 4501 121 573 455 453 89.06 6095 5786 7.47 7.83 Ecoli_55989_1785568_1791662 Sflexneri_2002017_915436_921221 290 5857 2 5570 5568 5569 98.85 225334 10951 2.47 50.85 Ecoli_55989_1802540_2027873 Sflexneri_2002017_1676443_1687393 5841 8624 1094 3877 2784 2784 98.38 225334 39985 1.24 6.96 Ecoli_55989_1802540_2027873 Sflexneri_2002017_1688646_1728630 9010 29250 3878 24135 20241 20258 98.93 225334 39985 8.98 50.66 Ecoli_55989_1802540_2027873 Sflexneri_2002017_1688646_1728630 29258 37758 25886 34386 8501 8501 98.68 225334 39985 3.77 21.26 Ecoli_55989_1802540_2027873 Sflexneri_2002017_1688646_1728630 37759 40119 34568 36928 2361 2361 98.94 225334 39985 1.05 5.90 Ecoli_55989_1802540_2027873 Sflexneri_2002017_1688646_1728630 40567 43624 36929 39985 3058 3057 98.20 225334 39985 1.36 7.65 Ecoli_55989_1802540_2027873 Sflexneri_2002017_1688646_1728630 43643 55174 1 11533 11532 11533 99.19 225334 20886 5.12 55.22 Ecoli_55989_1802540_2027873 Sflexneri_2002017_1729426_1750311 54777 64430 11232 20886 9654 9655 98.31 225334 20886 4.28 46.23 Ecoli_55989_1802540_2027873 Sflexneri_2002017_1729426_1750311 64427 75559 1 11133 11133 11133 99.14 225334 15586 4.94 71.43 Ecoli_55989_1802540_2027873 Sflexneri_2002017_1751645_1767230 75707 79809 11122 15225 4103 4104 98.61 225334 15586 1.82 26.33 Ecoli_55989_1802540_2027873 Sflexneri_2002017_1751645_1767230 79814 94438 1 14638 14625 14638 98.99 225334 21247 6.49 68.89 Ecoli_55989_1802540_2027873 Sflexneri_2002017_1768622_1789868 94621 101252 14639 21247 6632 6609 98.73 225334 21247 2.94 31.11 Ecoli_55989_1802540_2027873 Sflexneri_2002017_1768622_1789868 101264 121595 1 20284 20332 20284 98.75 225334 20284 9.02 100.00 Ecoli_55989_1802540_2027873 Sflexneri_2002017_1790656_1810939 124928 149555 24631 1 24628 24631 98.87 225334 24634 10.93 99.99 Ecoli_55989_1802540_2027873 Sflexneri_2002017_1598794_1623427 150134 158501 8364 1 8368 8364 98.58 225334 8364 3.71 100.00 Ecoli_55989_1802540_2027873 Sflexneri_2002017_1589643_1598006 164675 182289 17607 1 17615 17607 98.53 225334 17607 7.82 100.00 Ecoli_55989_1802540_2027873 Sflexneri_2002017_1571247_1588853 182282 183633 6050 4700 1352 1351 97.63 225334 6050 0.60 22.33 Ecoli_55989_1802540_2027873 Sflexneri_2002017_1563761_1569810 183669 188396 4710 1 4728 4710 97.02 225334 6050 2.10 77.85 Ecoli_55989_1802540_2027873 Sflexneri_2002017_1563761_1569810 188412 210786 25658 3281 22375 22378 98.88 225334 25658 9.93 87.22 Ecoli_55989_1802540_2027873 Sflexneri_2002017_1536752_1562409 210879 214159 3281 1 3281 3281 98.84 225334 25658 1.46 12.79 Ecoli_55989_1802540_2027873 Sflexneri_2002017_1536752_1562409 218141 219146 7156 6151 1006 1006 99.40 225334 7156 0.45 14.06 Ecoli_55989_1802540_2027873 Sflexneri_2002017_1528326_1535481 219350 224954 6157 557 5605 5601 98.63 225334 7156 2.49 78.27 Ecoli_55989_1802540_2027873 Sflexneri_2002017_1528326_1535481 14 18674 1 18660 18661 18660 98.93 215263 18660 8.67 100.00 Ecoli_55989_1_215263 Sflexneri_2002017_1_18660 22436 44121 4 21672 21686 21669 98.12 215263 66975 10.07 32.35 Ecoli_55989_1_215263 Sflexneri_2002017_19440_86414 44222 89508 21657 66975 45287 45319 98.72 215263 66975 21.04 67.67 Ecoli_55989_1_215263 Sflexneri_2002017_19440_86414 89519 116484 1 26965 26966 26965 98.88 215263 60412 12.53 44.64 Ecoli_55989_1_215263 Sflexneri_2002017_87202_147613 116721 130101 26965 40333 13381 13369 98.52 215263 60412 6.22 22.13 Ecoli_55989_1_215263 Sflexneri_2002017_87202_147613 129944 150085 40272 60412 20142 20141 98.11 215263 60412 9.36 33.34 Ecoli_55989_1_215263 Sflexneri_2002017_87202_147613 157226 215263 1 58036 58038 58036 98.84 215263 65457 26.96 88.66 Ecoli_55989_1_215263 Sflexneri_2002017_148393_213849 5954 26031 20073 1 20078 20073 98.83 30191 21269 66.50 94.38 Ecoli_55989_2029623_2059813 Sflexneri_2002017_1505778_1527046 26033 30190 17261 13102 4158 4160 99.21 30191 17263 13.77 24.10 Ecoli_55989_2029623_2059813 Sflexneri_2002017_1487739_1505001 1 13122 13109 1 13122 13109 98.40 81447 17263 16.11 75.94 Ecoli_55989_2060582_2142028 Sflexneri_2002017_1487739_1505001 13140 13736 693 97 597 597 98.83 81447 693 0.73 86.15 Ecoli_55989_2060582_2142028 Sflexneri_2002017_1485762_1486454 13705 39219 1524 27037 25515 25514 98.88 81447 29466 31.33 86.59 Ecoli_55989_2060582_2142028 Sflexneri_2002017_1941869_1971334 39223 41523 27166 29466 2301 2301 99.22 81447 29466 2.83 7.81 Ecoli_55989_2060582_2142028 Sflexneri_2002017_1941869_1971334 41534 41967 1 434 434 434 98.62 81447 2318 0.53 18.72 Ecoli_55989_2060582_2142028 Sflexneri_2002017_1972795_1975112 42349 53116 164 10929 10768 10766 98.88 81447 10930 13.22 98.50 Ecoli_55989_2060582_2142028 Sflexneri_2002017_2000806_2011735 53114 56768 1 3653 3655 3653 98.85 81447 4173 4.49 87.54 Ecoli_55989_2060582_2142028 Sflexneri_2002017_2013027_2017199 56856 68523 444 12111 11668 11668 98.96 81447 12111 14.33 96.34 Ecoli_55989_2060582_2142028 Sflexneri_2002017_2020167_2032277 70865 81447 1 10572 10583 10572 98.31 81447 10867 12.99 97.29 Ecoli_55989_2060582_2142028 Sflexneri_2002017_2033061_2043927 1 7307 58151 65457 7307 7307 98.84 7307 65457 100.00 11.16 Ecoli_55989_216657_223963 Sflexneri_2002017_148393_213849 1 175 10693 10867 175 175 99.43 175 10867 100.00 1.61 Ecoli_55989_2177794_2177968 Sflexneri_2002017_2033061_2043927 1 3962 1 3962 3962 3962 98.81 43097 44673 9.19 8.87 Ecoli_55989_2178042_2221138 Sflexneri_2002017_2044001_2088673 4100 10115 3963 9979 6016 6017 97.79 43097 44673 13.96 13.47 Ecoli_55989_2178042_2221138 Sflexneri_2002017_2044001_2088673 10418 11000 10885 11467 583 583 86.69 43097 44673 1.35 1.31 Ecoli_55989_2178042_2221138 Sflexneri_2002017_2044001_2088673 12565 17522 13050 18002 4958 4953 97.98 43097 44673 11.50 11.09 Ecoli_55989_2178042_2221138 Sflexneri_2002017_2044001_2088673 17509 18170 19202 19864 662 663 90.99 43097 44673 1.54 1.48 Ecoli_55989_2178042_2221138 Sflexneri_2002017_2044001_2088673 18174 25952 21744 29527 7779 7784 98.00 43097 44673 18.05 17.42 Ecoli_55989_2178042_2221138 Sflexneri_2002017_2044001_2088673 26045 40471 29521 43943 14427 14423 97.64 43097 44673 33.48 32.29 Ecoli_55989_2178042_2221138 Sflexneri_2002017_2044001_2088673 40627 41357 43943 44673 731 731 95.35 43097 44673 1.70 1.64 Ecoli_55989_2178042_2221138 Sflexneri_2002017_2044001_2088673 1 440 305 745 440 441 92.76 449 745 98.00 59.19 Ecoli_55989_2223624_2224072 Sflexneri_2002017_2092000_2092744 6 6938 1 6944 6933 6944 96.79 7935 7185 87.37 96.65 Ecoli_55989_2224844_2232778 Sflexneri_2002017_2093530_2100714 6877 7935 2300 3358 1059 1059 98.58 7935 3358 13.35 31.54 Ecoli_55989_2224844_2232778 Sflexneri_2002017_2118390_2121747 1 1515 1 1515 1515 1515 99.21 39805 1515 3.81 100.00 Ecoli_55989_2232884_2272688 Sflexneri_2002017_2121853_2123367 36539 39805 1 3271 3267 3271 98.38 39805 3271 8.21 100.00 Ecoli_55989_2232884_2272688 Sflexneri_2002017_2125842_2129112 1 1723 1 1707 1723 1707 96.92 1723 1707 100.00 100.00 Ecoli_55989_2272791_2274513 Sflexneri_2002017_2129215_2130921 1 2304 1 2305 2304 2305 97.14 2304 2305 100.00 100.00 Ecoli_55989_2274599_2276902 Sflexneri_2002017_2131007_2133311 1 3356 1 3356 3356 3356 97.94 76219 3356 4.40 100.00 Ecoli_55989_2277004_2353222 Sflexneri_2002017_2133413_2136768 12691 12834 1 144 144 144 98.61 76219 1553 0.19 9.27 Ecoli_55989_2277004_2353222 Sflexneri_2002017_3117675_3119227 36822 43482 1 6661 6661 6661 98.41 76219 6661 8.74 100.00 Ecoli_55989_2277004_2353222 Sflexneri_2002017_2142716_2149376 43495 52764 4 9351 9270 9348 94.15 76219 38779 12.16 24.11 Ecoli_55989_2277004_2353222 Sflexneri_2002017_2150163_2188941 52794 55305 9334 11847 2512 2514 94.83 76219 38779 3.30 6.48 Ecoli_55989_2277004_2353222 Sflexneri_2002017_2150163_2188941 65288 66248 23139 24099 961 961 94.80 76219 38779 1.26 2.48 Ecoli_55989_2277004_2353222 Sflexneri_2002017_2150163_2188941 67625 71618 24255 28248 3994 3994 95.92 76219 38779 5.24 10.30 Ecoli_55989_2277004_2353222 Sflexneri_2002017_2150163_2188941 71716 76219 28250 32744 4504 4495 96.83 76219 38779 5.91 11.59 Ecoli_55989_2277004_2353222 Sflexneri_2002017_2150163_2188941 1 963 1 964 963 964 97.61 963 981 100.00 98.27 Ecoli_55989_229639_230601 Sflexneri_2002017_219388_220368 35 7185 1 7139 7151 7139 98.27 7185 7139 99.53 100.00 Ecoli_55989_231940_239124 Sflexneri_2002017_221824_228962 1 77 32753 32829 77 77 98.70 80 38779 96.25 0.20 Ecoli_55989_2353319_2353398 Sflexneri_2002017_2150163_2188941 1 5940 32841 38779 5940 5939 97.53 72862 38779 8.15 15.31 Ecoli_55989_2353495_2426356 Sflexneri_2002017_2150163_2188941 6988 10332 1 3345 3345 3345 97.67 72862 30286 4.59 11.04 Ecoli_55989_2353495_2426356 Sflexneri_2002017_2189727_2220012 10491 16506 3419 9434 6016 6016 98.40 72862 30286 8.26 19.86 Ecoli_55989_2353495_2426356 Sflexneri_2002017_2189727_2220012 16506 20512 9612 13618 4007 4007 99.10 72862 30286 5.50 13.23 Ecoli_55989_2353495_2426356 Sflexneri_2002017_2189727_2220012 30858 42091 13618 24839 11234 11222 97.93 72862 30286 15.42 37.05 Ecoli_55989_2353495_2426356 Sflexneri_2002017_2189727_2220012 42872 48294 24862 30286 5423 5425 98.27 72862 30286 7.44 17.91 Ecoli_55989_2353495_2426356 Sflexneri_2002017_2189727_2220012 48305 53997 1 5696 5693 5696 97.81 72862 18058 7.81 31.54 Ecoli_55989_2353495_2426356 Sflexneri_2002017_2220800_2238857 55489 67882 5697 18058 12394 12362 97.68 72862 18058 17.01 68.46 Ecoli_55989_2353495_2426356 Sflexneri_2002017_2220800_2238857 67887 72070 1 4183 4184 4183 97.56 72862 4183 5.74 100.00 Ecoli_55989_2353495_2426356 Sflexneri_2002017_2239639_2243821 72075 72622 1 548 548 548 98.54 72862 548 0.75 100.00 Ecoli_55989_2353495_2426356 Sflexneri_2002017_2245093_2245640 72630 72860 1 231 231 231 100.00 72862 14313 0.32 1.61 Ecoli_55989_2353495_2426356 Sflexneri_2002017_2246425_2260737 1 258 429 686 258 258 100.00 22366 686 1.15 37.61 Ecoli_55989_2427125_2449490 Sflexneri_2002017_2261518_2262203 275 3161 1 2887 2887 2887 99.34 22366 2887 12.91 100.00 Ecoli_55989_2427125_2449490 Sflexneri_2002017_2262996_2265882 3153 3309 1 157 157 157 98.73 22366 641 0.70 24.49 Ecoli_55989_2427125_2449490 Sflexneri_2002017_2267311_2267951 3285 3524 383 623 240 241 97.10 22366 623 1.07 38.68 Ecoli_55989_2427125_2449490 Sflexneri_2002017_2274927_2275549 3523 8046 1 4528 4524 4528 98.43 22366 49537 20.23 9.14 Ecoli_55989_2427125_2449490 Sflexneri_2002017_2276857_2326393 8034 22366 4557 18875 14333 14319 98.28 22366 49537 64.08 28.91 Ecoli_55989_2427125_2449490 Sflexneri_2002017_2276857_2326393 1 17974 18879 36715 17974 17837 97.78 197191 49537 9.12 36.01 Ecoli_55989_2449619_2646809 Sflexneri_2002017_2276857_2326393 18328 30796 37069 49537 12469 12469 98.08 197191 49537 6.32 25.17 Ecoli_55989_2449619_2646809 Sflexneri_2002017_2276857_2326393 30804 55759 1 24957 24956 24957 98.63 197191 58023 12.66 43.01 Ecoli_55989_2449619_2646809 Sflexneri_2002017_2327177_2385199 55735 88683 25109 58023 32949 32915 98.46 197191 58023 16.71 56.73 Ecoli_55989_2449619_2646809 Sflexneri_2002017_2327177_2385199 88694 100598 1 11917 11905 11917 97.78 197191 11917 6.04 100.00 Ecoli_55989_2449619_2646809 Sflexneri_2002017_2386465_2398381 100621 103760 1 3140 3140 3140 98.79 197191 34865 1.59 9.01 Ecoli_55989_2449619_2646809 Sflexneri_2002017_2399724_2434588 103834 135303 3359 34863 31470 31505 98.35 197191 34865 15.96 90.36 Ecoli_55989_2449619_2646809 Sflexneri_2002017_2399724_2434588 136118 137580 1 1479 1463 1479 95.40 197191 67660 0.74 2.19 Ecoli_55989_2449619_2646809 Sflexneri_2002017_2435372_2503031 137752 197191 1471 60881 59440 59411 98.84 197191 67660 30.14 87.81 Ecoli_55989_2449619_2646809 Sflexneri_2002017_2435372_2503031 1 6688 60975 67660 6688 6686 99.33 100885 67660 6.63 9.88 Ecoli_55989_2648182_2749066 Sflexneri_2002017_2435372_2503031 6691 17794 1 11112 11104 11112 98.51 100885 11112 11.01 100.00 Ecoli_55989_2648182_2749066 Sflexneri_2002017_2503811_2514922 22335 22682 35748 35397 348 352 88.92 100885 40537 0.34 0.87 Ecoli_55989_2648182_2749066 Sflexneri_2002017_307685_348221 29772 31419 9620 7973 1648 1648 88.92 100885 12648 1.63 13.03 Ecoli_55989_2648182_2749066 Sflexneri_2002017_237832_250479 30143 33219 30546 27471 3077 3076 93.73 100885 40537 3.05 7.59 Ecoli_55989_2648182_2749066 Sflexneri_2002017_307685_348221 40135 40439 20142 19838 305 305 98.69 100885 40537 0.30 0.75 Ecoli_55989_2648182_2749066 Sflexneri_2002017_307685_348221 40891 41016 19801 19675 126 127 96.85 100885 40537 0.12 0.31 Ecoli_55989_2648182_2749066 Sflexneri_2002017_307685_348221 41594 42229 19024 18388 636 637 96.39 100885 40537 0.63 1.57 Ecoli_55989_2648182_2749066 Sflexneri_2002017_307685_348221 42922 43164 17592 17350 243 243 97.94 100885 40537 0.24 0.60 Ecoli_55989_2648182_2749066 Sflexneri_2002017_307685_348221 43270 43351 17254 17173 82 82 98.78 100885 40537 0.08 0.20 Ecoli_55989_2648182_2749066 Sflexneri_2002017_307685_348221 43584 43652 17191 17124 69 68 97.10 100885 40537 0.07 0.17 Ecoli_55989_2648182_2749066 Sflexneri_2002017_307685_348221 43767 45911 17007 14863 2145 2145 95.99 100885 40537 2.13 5.29 Ecoli_55989_2648182_2749066 Sflexneri_2002017_307685_348221 47268 49788 13878 11358 2521 2521 98.41 100885 40537 2.50 6.22 Ecoli_55989_2648182_2749066 Sflexneri_2002017_307685_348221 52661 53062 8796 8395 402 402 99.25 100885 40537 0.40 0.99 Ecoli_55989_2648182_2749066 Sflexneri_2002017_307685_348221 54878 55075 6341 6144 198 198 97.47 100885 40537 0.20 0.49 Ecoli_55989_2648182_2749066 Sflexneri_2002017_307685_348221 56880 57278 4965 4567 399 399 99.50 100885 40537 0.40 0.98 Ecoli_55989_2648182_2749066 Sflexneri_2002017_307685_348221 60277 83285 1 23000 23009 23000 98.96 100885 40309 22.81 57.06 Ecoli_55989_2648182_2749066 Sflexneri_2002017_2516782_2557090 83489 100885 22993 40309 17397 17317 98.09 100885 40309 17.24 42.96 Ecoli_55989_2648182_2749066 Sflexneri_2002017_2516782_2557090 9 6561 8455 15007 6553 6553 98.20 12796 28663 51.21 22.86 Ecoli_55989_272091_284886 Sflexneri_2002017_278232_306894 7550 8076 15245 15771 527 527 94.88 12796 28663 4.12 1.84 Ecoli_55989_272091_284886 Sflexneri_2002017_278232_306894 8871 12461 16667 20257 3591 3591 96.69 12796 28663 28.06 12.53 Ecoli_55989_272091_284886 Sflexneri_2002017_278232_306894 12455 12796 21010 21351 342 342 98.25 12796 28663 2.67 1.19 Ecoli_55989_272091_284886 Sflexneri_2002017_278232_306894 1 2702 1 2702 2702 2702 99.63 2702 2702 100.00 100.00 Ecoli_55989_2749260_2751961 Sflexneri_2002017_2557284_2559985 4410 16184 606 12381 11775 11776 99.18 38553 80265 30.54 14.67 Ecoli_55989_2752549_2791101 Sflexneri_2002017_2560261_2640525 16188 21167 13347 18327 4980 4981 97.81 38553 80265 12.92 6.21 Ecoli_55989_2752549_2791101 Sflexneri_2002017_2560261_2640525 21171 25570 18464 22864 4400 4401 98.25 38553 80265 11.41 5.48 Ecoli_55989_2752549_2791101 Sflexneri_2002017_2560261_2640525 26755 33682 22865 29792 6928 6928 98.51 38553 80265 17.97 8.63 Ecoli_55989_2752549_2791101 Sflexneri_2002017_2560261_2640525 35895 36962 39004 40071 1068 1068 99.25 38553 80265 2.77 1.33 Ecoli_55989_2752549_2791101 Sflexneri_2002017_2560261_2640525 6370 28509 40065 62265 22140 22201 98.15 157841 80265 14.03 27.66 Ecoli_55989_2791384_2949224 Sflexneri_2002017_2560261_2640525 29336 47232 62333 80265 17897 17933 98.89 157841 80265 11.34 22.34 Ecoli_55989_2791384_2949224 Sflexneri_2002017_2560261_2640525 47293 60281 1 12984 12989 12984 99.08 157841 12984 8.23 100.00 Ecoli_55989_2791384_2949224 Sflexneri_2002017_2640698_2653681 60285 79581 1 19302 19297 19302 99.03 157841 19302 12.23 100.00 Ecoli_55989_2791384_2949224 Sflexneri_2002017_2654951_2674252 85335 86022 1 699 688 699 93.57 157841 47273 0.44 1.48 Ecoli_55989_2791384_2949224 Sflexneri_2002017_2675704_2722976 85833 88523 831 3522 2691 2692 99.37 157841 47273 1.70 5.69 Ecoli_55989_2791384_2949224 Sflexneri_2002017_2675704_2722976 88692 116065 3572 30960 27374 27389 98.60 157841 47273 17.34 57.94 Ecoli_55989_2791384_2949224 Sflexneri_2002017_2675704_2722976 116080 131564 31109 46575 15485 15467 98.66 157841 47273 9.81 32.72 Ecoli_55989_2791384_2949224 Sflexneri_2002017_2675704_2722976 131527 146112 1318 15902 14586 14585 98.83 157841 27458 9.24 53.12 Ecoli_55989_2791384_2949224 Sflexneri_2002017_2733261_2760718 146290 157841 15906 27458 11552 11553 99.03 157841 27458 7.32 42.08 Ecoli_55989_2791384_2949224 Sflexneri_2002017_2733261_2760718 1 7342 21352 28663 7342 7312 97.30 93662 28663 7.84 25.51 Ecoli_55989_286225_379886 Sflexneri_2002017_278232_306894 7357 10080 1 2724 2724 2724 98.86 93662 40537 2.91 6.72 Ecoli_55989_286225_379886 Sflexneri_2002017_307685_348221 51882 56063 4183 1 4182 4183 98.71 93662 4183 4.46 100.00 Ecoli_55989_286225_379886 Sflexneri_2002017_273253_277435 1 85 1 85 85 85 98.82 98793 85 0.09 100.00 Ecoli_55989_2954733_3053525 Sflexneri_2002017_2766143_2766227 109 5433 5324 1 5325 5324 99.17 98793 5324 5.39 100.00 Ecoli_55989_2954733_3053525 Sflexneri_2002017_2767676_2772999 5447 25808 1 20359 20362 20359 98.60 98793 20490 20.61 99.36 Ecoli_55989_2954733_3053525 Sflexneri_2002017_2774466_2794955 41431 45407 1 3975 3977 3975 97.56 98793 11515 4.03 34.52 Ecoli_55989_2954733_3053525 Sflexneri_2002017_2797035_2808549 45446 49900 3969 8423 4455 4455 97.71 98793 11515 4.51 38.69 Ecoli_55989_2954733_3053525 Sflexneri_2002017_2797035_2808549 50136 53065 8586 11515 2930 2930 98.46 98793 11515 2.97 25.45 Ecoli_55989_2954733_3053525 Sflexneri_2002017_2797035_2808549 53075 73611 1 20533 20537 20533 98.67 98793 20536 20.79 99.99 Ecoli_55989_2954733_3053525 Sflexneri_2002017_2809896_2830431 74373 74438 3 68 66 66 100.00 98793 68 0.07 97.06 Ecoli_55989_2954733_3053525 Sflexneri_2002017_2830505_2830572 74645 91389 1 16744 16745 16744 98.94 98793 33152 16.95 50.51 Ecoli_55989_2954733_3053525 Sflexneri_2002017_2830646_2863797 91421 95705 16679 20964 4285 4286 97.78 98793 33152 4.34 12.93 Ecoli_55989_2954733_3053525 Sflexneri_2002017_2830646_2863797 3402 15567 20955 33152 12166 12198 98.21 76988 33152 15.80 36.79 Ecoli_55989_3054904_3131891 Sflexneri_2002017_2830646_2863797 15572 21272 1 5697 5701 5697 98.93 76988 5697 7.41 100.00 Ecoli_55989_3054904_3131891 Sflexneri_2002017_2864579_2870275 25954 39315 3443 16804 13362 13362 98.32 76988 29797 17.36 44.84 Ecoli_55989_3054904_3131891 Sflexneri_2002017_2872815_2902611 46963 59898 16863 29797 12936 12935 97.63 76988 29797 16.80 43.41 Ecoli_55989_3054904_3131891 Sflexneri_2002017_2872815_2902611 66374 67383 1 1010 1010 1010 99.01 76988 1010 1.31 100.00 Ecoli_55989_3054904_3131891 Sflexneri_2002017_2903400_2904409 67390 72360 1 4933 4971 4933 98.13 76988 21252 6.46 23.21 Ecoli_55989_3054904_3131891 Sflexneri_2002017_2905192_2926443 73051 76988 4987 8924 3938 3938 98.86 76988 21252 5.12 18.53 Ecoli_55989_3054904_3131891 Sflexneri_2002017_2905192_2926443 1 12325 8929 21252 12325 12324 98.96 31866 21252 38.68 57.99 Ecoli_55989_3132672_3164537 Sflexneri_2002017_2905192_2926443 12337 30525 1 18189 18189 18189 98.81 31866 19691 57.08 92.37 Ecoli_55989_3132672_3164537 Sflexneri_2002017_2927890_2947580 30530 31866 18355 19691 1337 1337 98.58 31866 19691 4.20 6.79 Ecoli_55989_3132672_3164537 Sflexneri_2002017_2927890_2947580 1 39960 3 39998 39960 39996 98.78 101446 39998 39.39 100.00 Ecoli_55989_3164837_3266282 Sflexneri_2002017_2947769_2987766 57521 58305 1 785 785 785 96.82 101446 2573 0.77 30.51 Ecoli_55989_3164837_3266282 Sflexneri_2002017_2989026_2991598 58289 63320 4500 9531 5032 5032 99.38 101446 9531 4.96 52.80 Ecoli_55989_3164837_3266282 Sflexneri_2002017_2992854_3002384 90012 101446 1 11435 11435 11435 98.71 101446 40563 11.27 28.19 Ecoli_55989_3164837_3266282 Sflexneri_2002017_3004504_3045066 1 27833 11592 39429 27833 27838 98.74 29135 40563 95.53 68.63 Ecoli_55989_3267599_3296733 Sflexneri_2002017_3004504_3045066 27832 27976 25114 24970 145 145 85.62 29135 58023 0.50 0.25 Ecoli_55989_3267599_3296733 Sflexneri_2002017_2327177_2385199 27968 29135 39396 40563 1168 1168 99.40 29135 40563 4.01 2.88 Ecoli_55989_3267599_3296733 Sflexneri_2002017_3004504_3045066 1 9137 1 9137 9137 9137 98.93 58193 9137 15.70 100.00 Ecoli_55989_3296857_3355049 Sflexneri_2002017_3045190_3054326 11024 11148 1 125 125 125 99.20 58193 6044 0.21 2.07 Ecoli_55989_3296857_3355049 Sflexneri_2002017_3055115_3061158 11383 16049 1378 6044 4667 4667 98.07 58193 6044 8.02 77.22 Ecoli_55989_3296857_3355049 Sflexneri_2002017_3055115_3061158 16465 30976 1 14513 14512 14513 98.33 58193 16379 24.94 88.61 Ecoli_55989_3296857_3355049 Sflexneri_2002017_3061941_3078319 31177 44543 1356 14725 13367 13370 98.74 58193 18808 22.97 71.09 Ecoli_55989_3296857_3355049 Sflexneri_2002017_3079090_3097897 44880 45060 10191 10372 181 182 92.86 58193 10372 0.31 1.75 Ecoli_55989_3296857_3355049 Sflexneri_2002017_1080669_1091040 16394 17205 259 1072 812 814 91.90 61930 1072 1.31 75.93 Ecoli_55989_3414773_3476702 Sflexneri_2002017_3115350_3116421 19303 34239 1713 16768 14937 15056 94.29 61930 19616 24.12 76.75 Ecoli_55989_3414773_3476702 Sflexneri_2002017_3120568_3140183 34330 35619 17142 18430 1290 1289 92.18 61930 19616 2.08 6.57 Ecoli_55989_3414773_3476702 Sflexneri_2002017_3120568_3140183 52644 61930 1356 10542 9287 9187 97.52 61930 72124 15.00 12.74 Ecoli_55989_3414773_3476702 Sflexneri_2002017_3143904_3216027 1 13420 15215 28634 13420 13420 97.93 13420 72124 100.00 18.61 Ecoli_55989_3477477_3490896 Sflexneri_2002017_3143904_3216027 1 270 28718 28987 270 270 98.15 131016 72124 0.21 0.37 Ecoli_55989_3492259_3623274 Sflexneri_2002017_3143904_3216027 270 10879 29108 39717 10610 10610 98.99 131016 72124 8.10 14.71 Ecoli_55989_3492259_3623274 Sflexneri_2002017_3143904_3216027 10880 43126 39951 72124 32247 32174 98.60 131016 72124 24.61 44.61 Ecoli_55989_3492259_3623274 Sflexneri_2002017_3143904_3216027 47865 48698 1 834 834 834 98.32 131016 834 0.64 100.00 Ecoli_55989_3492259_3623274 Sflexneri_2002017_3218344_3219177 50101 51768 1 1667 1668 1667 98.56 131016 21625 1.27 7.71 Ecoli_55989_3492259_3623274 Sflexneri_2002017_3219955_3241579 51037 63707 1313 13982 12671 12670 98.19 131016 21625 9.67 58.59 Ecoli_55989_3492259_3623274 Sflexneri_2002017_3219955_3241579 63770 71418 13977 21625 7649 7649 99.06 131016 21625 5.84 35.37 Ecoli_55989_3492259_3623274 Sflexneri_2002017_3219955_3241579 71445 87777 1 16306 16333 16306 98.46 131016 34775 12.47 46.89 Ecoli_55989_3492259_3623274 Sflexneri_2002017_3243044_3277818 87814 90582 16243 19011 2769 2769 97.98 131016 34775 2.11 7.96 Ecoli_55989_3492259_3623274 Sflexneri_2002017_3243044_3277818 90582 95569 19336 24332 4988 4997 97.38 131016 34775 3.81 14.37 Ecoli_55989_3492259_3623274 Sflexneri_2002017_3243044_3277818 95790 105814 24750 34775 10025 10026 99.21 131016 34775 7.65 28.83 Ecoli_55989_3492259_3623274 Sflexneri_2002017_3243044_3277818 107967 112098 1 4118 4132 4118 98.50 131016 35186 3.15 11.70 Ecoli_55989_3492259_3623274 Sflexneri_2002017_3278615_3313800 112180 114055 4104 5979 1876 1876 99.09 131016 35186 1.43 5.33 Ecoli_55989_3492259_3623274 Sflexneri_2002017_3278615_3313800 114708 116637 6193 8122 1930 1930 98.19 131016 35186 1.47 5.49 Ecoli_55989_3492259_3623274 Sflexneri_2002017_3278615_3313800 116637 131016 8273 22640 14380 14368 98.41 131016 35186 10.98 40.83 Ecoli_55989_3492259_3623274 Sflexneri_2002017_3278615_3313800 1 6616 23180 29797 6616 6618 98.73 50404 35186 13.13 18.81 Ecoli_55989_3625206_3675609 Sflexneri_2002017_3278615_3313800 7622 12971 29867 35186 5350 5320 97.68 50404 35186 10.61 15.12 Ecoli_55989_3625206_3675609 Sflexneri_2002017_3278615_3313800 16523 19577 1 3056 3055 3056 99.64 50404 3056 6.06 100.00 Ecoli_55989_3625206_3675609 Sflexneri_2002017_3314584_3317639 19584 22603 1 3019 3020 3019 98.68 50404 3019 5.99 100.00 Ecoli_55989_3625206_3675609 Sflexneri_2002017_3318423_3321441 22604 35439 1 12837 12836 12837 98.43 50404 27653 25.47 46.42 Ecoli_55989_3625206_3675609 Sflexneri_2002017_3322776_3350428 35564 50404 12837 27653 14841 14817 98.80 50404 27653 29.44 53.58 Ecoli_55989_3625206_3675609 Sflexneri_2002017_3322776_3350428 1 12139 1 12142 12139 12142 99.24 97366 42986 12.47 28.25 Ecoli_55989_3675684_3773049 Sflexneri_2002017_3350503_3393488 12143 42852 12292 42986 30710 30695 98.92 97366 42986 31.54 71.41 Ecoli_55989_3675684_3773049 Sflexneri_2002017_3350503_3393488 42851 49088 1 6239 6238 6239 98.80 97366 6239 6.41 100.00 Ecoli_55989_3675684_3773049 Sflexneri_2002017_3394718_3400956 49099 86738 1 37618 37640 37618 99.07 97366 37618 38.66 100.00 Ecoli_55989_3675684_3773049 Sflexneri_2002017_3401743_3439360 92817 94624 1 1797 1808 1797 98.17 97366 1797 1.86 100.00 Ecoli_55989_3675684_3773049 Sflexneri_2002017_3440145_3441941 94638 97214 1 2577 2577 2577 98.41 97366 2800 2.65 92.04 Ecoli_55989_3675684_3773049 Sflexneri_2002017_3442731_3445530 1 111 2690 2800 111 111 100.00 111 2800 100.00 3.96 Ecoli_55989_3773178_3773288 Sflexneri_2002017_3442731_3445530 1 8991 1 9026 8991 9026 98.24 26037 24557 34.53 36.76 Ecoli_55989_3778640_3804676 Sflexneri_2002017_3450881_3475437 10528 26037 9047 24557 15510 15511 99.52 26037 24557 59.57 63.16 Ecoli_55989_3778640_3804676 Sflexneri_2002017_3450881_3475437 1 63168 1 63151 63168 63151 98.41 189210 72719 33.39 86.84 Ecoli_55989_3805860_3995069 Sflexneri_2002017_3476621_3549339 63955 73479 63195 72719 9525 9525 98.27 189210 72719 5.03 13.10 Ecoli_55989_3805860_3995069 Sflexneri_2002017_3476621_3549339 73527 92905 728 20098 19379 19371 98.27 189210 20674 10.24 93.70 Ecoli_55989_3805860_3995069 Sflexneri_2002017_3550687_3571360 96348 96655 20367 20674 308 308 92.88 189210 20674 0.16 1.49 Ecoli_55989_3805860_3995069 Sflexneri_2002017_3550687_3571360 96671 114181 1 17512 17511 17512 98.96 189210 66637 9.25 26.28 Ecoli_55989_3805860_3995069 Sflexneri_2002017_3572814_3639450 116863 158789 17575 59428 41927 41854 97.71 189210 66637 22.16 62.81 Ecoli_55989_3805860_3995069 Sflexneri_2002017_3572814_3639450 158935 161824 59556 62402 2890 2847 93.46 189210 66637 1.53 4.27 Ecoli_55989_3805860_3995069 Sflexneri_2002017_3572814_3639450 5371 17507 484 12626 12137 12143 98.03 136806 12626 8.87 96.17 Ecoli_55989_3995839_4132644 Sflexneri_2002017_3646457_3659082 17512 19716 2205 1 2205 2205 97.82 136806 2205 1.61 100.00 Ecoli_55989_3995839_4132644 Sflexneri_2002017_3659875_3662079 20202 29398 1 9186 9197 9186 97.39 136806 9186 6.72 100.00 Ecoli_55989_3995839_4132644 Sflexneri_2002017_3662856_3672041 29403 38488 9086 1 9086 9086 99.43 136806 9172 6.64 99.06 Ecoli_55989_3995839_4132644 Sflexneri_2002017_3726127_3735298 38659 40567 1 1909 1909 1909 99.32 136806 1909 1.40 100.00 Ecoli_55989_3995839_4132644 Sflexneri_2002017_3672967_3674875 40572 45379 1 4808 4808 4808 99.06 136806 47653 3.51 10.09 Ecoli_55989_3995839_4132644 Sflexneri_2002017_3676318_3723970 45610 55274 4987 14660 9665 9674 99.08 136806 47653 7.06 20.30 Ecoli_55989_3995839_4132644 Sflexneri_2002017_3676318_3723970 56995 57274 14654 14933 280 280 96.43 136806 47653 0.20 0.59 Ecoli_55989_3995839_4132644 Sflexneri_2002017_3676318_3723970 58411 76702 14927 33217 18292 18291 98.54 136806 47653 13.37 38.38 Ecoli_55989_3995839_4132644 Sflexneri_2002017_3676318_3723970 76699 81161 33371 37833 4463 4463 98.05 136806 47653 3.26 9.37 Ecoli_55989_3995839_4132644 Sflexneri_2002017_3676318_3723970 86950 92132 37930 43112 5183 5183 98.48 136806 47653 3.79 10.88 Ecoli_55989_3995839_4132644 Sflexneri_2002017_3676318_3723970 92260 96808 43105 47653 4549 4549 98.84 136806 47653 3.33 9.55 Ecoli_55989_3995839_4132644 Sflexneri_2002017_3676318_3723970 97030 118620 1 21499 21591 21499 98.66 136806 21499 15.78 100.00 Ecoli_55989_3995839_4132644 Sflexneri_2002017_3736197_3757695 119235 120807 1 1573 1573 1573 99.62 136806 1573 1.15 100.00 Ecoli_55989_3995839_4132644 Sflexneri_2002017_3758484_3760056 129038 136731 1 7694 7694 7694 98.25 136806 14418 5.62 53.36 Ecoli_55989_3995839_4132644 Sflexneri_2002017_3760837_3775254 6501 11572 5390 319 5072 5072 98.99 22006 5390 23.05 94.10 Ecoli_55989_404478_426483 Sflexneri_2002017_266582_271971 13852 14773 9600 8679 922 922 98.92 22006 9600 4.19 9.60 Ecoli_55989_404478_426483 Sflexneri_2002017_251877_261476 14893 22006 8679 1566 7114 7114 99.44 22006 9600 32.33 74.10 Ecoli_55989_404478_426483 Sflexneri_2002017_251877_261476 3410 4470 7727 8786 1061 1060 98.40 183014 14418 0.58 7.35 Ecoli_55989_4138723_4321736 Sflexneri_2002017_3760837_3775254 4509 7370 8775 11636 2862 2862 98.29 183014 14418 1.56 19.85 Ecoli_55989_4138723_4321736 Sflexneri_2002017_3760837_3775254 7508 10288 11639 14418 2781 2780 98.67 183014 14418 1.52 19.28 Ecoli_55989_4138723_4321736 Sflexneri_2002017_3760837_3775254 10416 12007 1 1592 1592 1592 99.75 183014 17929 0.87 8.88 Ecoli_55989_4138723_4321736 Sflexneri_2002017_3776158_3794086 12116 28523 1575 17929 16408 16355 97.84 183014 17929 8.97 91.22 Ecoli_55989_4138723_4321736 Sflexneri_2002017_3776158_3794086 29424 44759 1 15336 15336 15336 99.02 183014 15336 8.38 100.00 Ecoli_55989_4138723_4321736 Sflexneri_2002017_3794862_3810197 44768 54093 1 9326 9326 9326 99.07 183014 33521 5.10 27.82 Ecoli_55989_4138723_4321736 Sflexneri_2002017_3810982_3844502 54307 63612 9540 18844 9306 9305 99.11 183014 33521 5.08 27.76 Ecoli_55989_4138723_4321736 Sflexneri_2002017_3810982_3844502 63744 72616 18844 27717 8873 8874 99.30 183014 33521 4.85 26.47 Ecoli_55989_4138723_4321736 Sflexneri_2002017_3810982_3844502 76326 90011 48319 34633 13686 13687 98.48 183014 48319 7.48 28.33 Ecoli_55989_4138723_4321736 Sflexneri_2002017_3888745_3937063 90186 124818 34597 1 34633 34597 98.59 183014 48319 18.92 71.60 Ecoli_55989_4138723_4321736 Sflexneri_2002017_3888745_3937063 124841 129850 5009 1 5010 5009 98.76 183014 5011 2.74 99.96 Ecoli_55989_4138723_4321736 Sflexneri_2002017_3882938_3887948 129851 133344 3492 1 3494 3492 96.45 183014 3492 1.91 100.00 Ecoli_55989_4138723_4321736 Sflexneri_2002017_3878179_3881670 139139 149075 9924 1 9937 9924 98.87 183014 9924 5.43 100.00 Ecoli_55989_4138723_4321736 Sflexneri_2002017_3867459_3877382 149072 151783 2712 1 2712 2712 99.63 183014 2712 1.48 100.00 Ecoli_55989_4138723_4321736 Sflexneri_2002017_3863974_3866685 151793 153365 1 1573 1573 1573 99.55 183014 1573 0.86 100.00 Ecoli_55989_4138723_4321736 Sflexneri_2002017_3941712_3943284 153385 172747 9825 29188 19363 19364 99.13 183014 29188 10.58 66.34 Ecoli_55989_4138723_4321736 Sflexneri_2002017_3948991_3978178 172765 175689 1 2925 2925 2925 99.35 183014 2925 1.60 100.00 Ecoli_55989_4138723_4321736 Sflexneri_2002017_3979634_3982558 175702 183014 1 7313 7313 7313 98.92 183014 7313 4.00 100.00 Ecoli_55989_4138723_4321736 Sflexneri_2002017_3983348_3990660 1 1572 1572 1 1572 1572 97.90 127361 9600 1.23 16.38 Ecoli_55989_427254_554614 Sflexneri_2002017_251877_261476 1570 6590 1 5021 5021 5021 99.60 127361 45786 3.94 10.97 Ecoli_55989_427254_554614 Sflexneri_2002017_350714_396499 6591 42961 5342 41698 36371 36357 98.48 127361 45786 28.56 79.41 Ecoli_55989_427254_554614 Sflexneri_2002017_350714_396499 45828 51219 1 5398 5392 5398 99.20 127361 5400 4.23 99.96 Ecoli_55989_427254_554614 Sflexneri_2002017_397279_402678 51843 76023 1 24175 24181 24175 99.04 127361 24175 18.99 100.00 Ecoli_55989_427254_554614 Sflexneri_2002017_404747_428921 76039 97878 1 21835 21840 21835 99.13 127361 53200 17.15 41.04 Ecoli_55989_427254_554614 Sflexneri_2002017_430375_483574 98036 108674 21889 32527 10639 10639 99.18 127361 53200 8.35 20.00 Ecoli_55989_427254_554614 Sflexneri_2002017_430375_483574 108639 122689 32593 46643 14051 14051 98.48 127361 53200 11.03 26.41 Ecoli_55989_427254_554614 Sflexneri_2002017_430375_483574 1 1880 1 1880 1880 1880 99.41 35658 34736 5.27 5.41 Ecoli_55989_4327242_4362899 Sflexneri_2002017_3996171_4030906 1917 12883 1876 12740 10967 10865 96.95 35658 34736 30.76 31.28 Ecoli_55989_4327242_4362899 Sflexneri_2002017_3996171_4030906 13729 35658 12808 34736 21930 21929 98.90 35658 34736 61.50 63.13 Ecoli_55989_4327242_4362899 Sflexneri_2002017_3996171_4030906 1 1657 1 1657 1657 1657 97.89 56048 1657 2.96 100.00 Ecoli_55989_4362986_4419033 Sflexneri_2002017_4030993_4032649 1662 10277 1 8622 8616 8622 98.52 56048 8622 15.37 100.00 Ecoli_55989_4362986_4419033 Sflexneri_2002017_4033990_4042611 10303 12728 1 2414 2426 2414 95.84 56048 8741 4.33 27.62 Ecoli_55989_4362986_4419033 Sflexneri_2002017_4043414_4052154 13693 20138 2296 8741 6446 6446 98.06 56048 8741 11.50 73.74 Ecoli_55989_4362986_4419033 Sflexneri_2002017_4043414_4052154 20161 21797 1 1637 1637 1637 97.92 56048 34234 2.92 4.78 Ecoli_55989_4362986_4419033 Sflexneri_2002017_4053615_4087848 24490 34097 2558 12165 9608 9608 98.86 56048 34234 17.14 28.07 Ecoli_55989_4362986_4419033 Sflexneri_2002017_4053615_4087848 34124 56048 12310 34234 21925 21925 98.93 56048 34234 39.12 64.04 Ecoli_55989_4362986_4419033 Sflexneri_2002017_4053615_4087848 1 15518 3 15559 15518 15557 98.41 84545 22263 18.35 69.88 Ecoli_55989_4424595_4509139 Sflexneri_2002017_4093406_4115668 15691 22334 15619 22263 6644 6645 98.77 84545 22263 7.86 29.85 Ecoli_55989_4424595_4509139 Sflexneri_2002017_4093406_4115668 31320 34272 11506 14458 2953 2953 99.19 84545 14470 3.49 20.41 Ecoli_55989_4424595_4509139 Sflexneri_2002017_4116451_4130920 36050 44262 1222 9433 8213 8212 98.94 84545 9433 9.71 87.06 Ecoli_55989_4424595_4509139 Sflexneri_2002017_4132541_4141973 46595 59849 1 13245 13255 13245 98.05 84545 13245 15.68 100.00 Ecoli_55989_4424595_4509139 Sflexneri_2002017_4142768_4156012 59856 84438 1 24674 24583 24674 98.84 84545 55397 29.08 44.54 Ecoli_55989_4424595_4509139 Sflexneri_2002017_4157355_4212751 1703 2337 24685 25318 635 634 97.96 43392 55397 1.46 1.14 Ecoli_55989_4512854_4556245 Sflexneri_2002017_4157355_4212751 2345 32380 25452 55397 30036 29946 98.00 43392 55397 69.22 54.06 Ecoli_55989_4512854_4556245 Sflexneri_2002017_4157355_4212751 32389 34409 1 2022 2021 2022 98.17 43392 2022 4.66 100.00 Ecoli_55989_4512854_4556245 Sflexneri_2002017_4214199_4216220 34407 43392 1 8977 8986 8977 98.71 43392 8977 20.71 100.00 Ecoli_55989_4512854_4556245 Sflexneri_2002017_4216996_4225972 161 3594 6 3439 3434 3434 99.62 3679 3439 93.34 99.85 Ecoli_55989_4561654_4565332 Sflexneri_2002017_4231362_4234800 1 117 1 117 117 117 98.29 391 117 29.92 100.00 Ecoli_55989_4565415_4565805 Sflexneri_2002017_4234968_4235084 192 391 1 200 200 200 100.00 391 200 51.15 100.00 Ecoli_55989_4565415_4565805 Sflexneri_2002017_4235159_4235358 1 12496 1 12496 12496 12496 99.70 30694 29921 40.71 41.76 Ecoli_55989_4566989_4597682 Sflexneri_2002017_4236542_4266462 13451 21652 12531 20732 8202 8202 98.67 30694 29921 26.72 27.41 Ecoli_55989_4566989_4597682 Sflexneri_2002017_4236542_4266462 21652 30694 20879 29921 9043 9043 98.82 30694 29921 29.46 30.22 Ecoli_55989_4566989_4597682 Sflexneri_2002017_4236542_4266462 1 4914 3 4917 4914 4915 98.23 148099 24080 3.32 20.41 Ecoli_55989_4603089_4751187 Sflexneri_2002017_4271867_4295946 4859 7177 4764 7082 2319 2319 99.48 148099 24080 1.57 9.63 Ecoli_55989_4603089_4751187 Sflexneri_2002017_4271867_4295946 7178 16053 7695 16569 8876 8875 98.12 148099 24080 5.99 36.86 Ecoli_55989_4603089_4751187 Sflexneri_2002017_4271867_4295946 16149 17054 22860 23765 906 906 97.68 148099 24080 0.61 3.76 Ecoli_55989_4603089_4751187 Sflexneri_2002017_4271867_4295946 17059 17237 23902 24080 179 179 99.44 148099 24080 0.12 0.74 Ecoli_55989_4603089_4751187 Sflexneri_2002017_4271867_4295946 17252 17345 1 94 94 94 100.00 148099 94 0.06 100.00 Ecoli_55989_4603089_4751187 Sflexneri_2002017_4437138_4437231 20889 24413 42740 39216 3525 3525 99.35 148099 42791 2.38 8.24 Ecoli_55989_4603089_4751187 Sflexneri_2002017_4356211_4399001 24414 63548 39109 1 39135 39109 98.61 148099 42791 26.42 91.40 Ecoli_55989_4603089_4751187 Sflexneri_2002017_4356211_4399001 63547 66743 1 3187 3197 3187 98.84 148099 28976 2.16 11.00 Ecoli_55989_4603089_4751187 Sflexneri_2002017_4326460_4355435 66722 92448 3325 28976 25727 25652 98.28 148099 28976 17.37 88.53 Ecoli_55989_4603089_4751187 Sflexneri_2002017_4326460_4355435 104746 133146 28400 1 28401 28400 98.81 148099 28406 19.18 99.98 Ecoli_55989_4603089_4751187 Sflexneri_2002017_4297280_4325685 140147 141305 1 1159 1159 1159 99.83 148099 1159 0.78 100.00 Ecoli_55989_4603089_4751187 Sflexneri_2002017_4507600_4508758 143376 143735 1 361 360 361 97.51 148099 12146 0.24 2.97 Ecoli_55989_4603089_4751187 Sflexneri_2002017_4509543_4521688 143714 148098 18390 14006 4385 4385 99.93 148099 19616 2.96 22.35 Ecoli_55989_4603089_4751187 Sflexneri_2002017_3120568_3140183 2 10382 10364 1 10381 10364 99.42 10977 11654 94.57 88.93 Ecoli_55989_4754766_4765742 Sflexneri_2002017_3850979_3862632 1 327 10362 10688 327 327 97.55 5731 11654 5.71 2.81 Ecoli_55989_4781370_4787100 Sflexneri_2002017_3850979_3862632 9 1276 858 2118 1268 1261 95.52 5731 2118 22.13 59.54 Ecoli_55989_4781370_4787100 Sflexneri_2002017_3848078_3850195 356 1723 8768 7401 1368 1368 99.63 1723 13654 79.40 10.02 Ecoli_55989_4793213_4794935 Sflexneri_2002017_3098115_3111768 1 6575 6962 389 6575 6574 99.92 6575 13654 100.00 48.15 Ecoli_55989_4795374_4801948 Sflexneri_2002017_3098115_3111768 1 5692 18807 13116 5692 5692 99.81 35373 18808 16.09 30.26 Ecoli_55989_4802555_4837927 Sflexneri_2002017_3079090_3097897 5455 17376 225 12146 11922 11922 99.18 35373 12146 33.70 98.16 Ecoli_55989_4802555_4837927 Sflexneri_2002017_4509543_4521688 17386 27014 1 9625 9629 9625 98.89 35373 9625 27.22 100.00 Ecoli_55989_4802555_4837927 Sflexneri_2002017_4522474_4532098 27009 28316 1 1298 1308 1298 98.09 35373 7787 3.70 16.67 Ecoli_55989_4802555_4837927 Sflexneri_2002017_4532836_4540622 29059 35373 1486 7787 6315 6302 98.40 35373 7787 17.85 80.93 Ecoli_55989_4802555_4837927 Sflexneri_2002017_4532836_4540622 1 17386 1 17384 17386 17384 98.88 35919 17384 48.40 100.00 Ecoli_55989_4838226_4874144 Sflexneri_2002017_4541153_4558536 19492 22894 1 3403 3403 3403 97.59 35919 3403 9.47 100.00 Ecoli_55989_4838226_4874144 Sflexneri_2002017_4559325_4562727 22895 31781 1 8885 8887 8885 98.30 35919 11637 24.74 76.35 Ecoli_55989_4838226_4874144 Sflexneri_2002017_4563505_4575141 32387 35126 8899 11637 2740 2739 99.05 35919 11637 7.63 23.54 Ecoli_55989_4838226_4874144 Sflexneri_2002017_4563505_4575141 35125 35517 1 394 393 394 94.42 35919 438 1.09 89.95 Ecoli_55989_4838226_4874144 Sflexneri_2002017_4435913_4436350 35628 35919 26273 25982 292 292 98.97 35919 28333 0.81 1.03 Ecoli_55989_4838226_4874144 Sflexneri_2002017_4477631_4505963 2 415 25978 25565 414 414 99.28 41331 28333 1.00 1.46 Ecoli_55989_4875895_4917225 Sflexneri_2002017_4477631_4505963 497 9510 25576 16566 9014 9011 98.28 41331 28333 21.81 31.80 Ecoli_55989_4875895_4917225 Sflexneri_2002017_4477631_4505963 9519 19175 15337 5681 9657 9657 99.02 41331 28333 23.37 34.08 Ecoli_55989_4875895_4917225 Sflexneri_2002017_4477631_4505963 19810 21806 5552 3558 1997 1995 97.40 41331 28333 4.83 7.04 Ecoli_55989_4875895_4917225 Sflexneri_2002017_4477631_4505963 21996 25529 3538 4 3534 3535 96.75 41331 28333 8.55 12.48 Ecoli_55989_4875895_4917225 Sflexneri_2002017_4477631_4505963 25548 28162 21500 18886 2615 2615 98.78 41331 21500 6.33 12.16 Ecoli_55989_4875895_4917225 Sflexneri_2002017_4454678_4476177 28219 41331 18897 5797 13113 13101 98.86 41331 21500 31.73 60.93 Ecoli_55989_4875895_4917225 Sflexneri_2002017_4454678_4476177 1 5556 5663 108 5556 5556 97.03 48675 21500 11.41 25.84 Ecoli_55989_4918638_4967312 Sflexneri_2002017_4454678_4476177 6614 19240 15380 2756 12627 12625 97.53 48675 15391 25.94 82.03 Ecoli_55989_4918638_4967312 Sflexneri_2002017_4438493_4453883 24331 25683 2666 1314 1353 1353 95.34 48675 15391 2.78 8.79 Ecoli_55989_4918638_4967312 Sflexneri_2002017_4438493_4453883 2420 2686 267 1 267 267 100.00 5898 269 4.53 99.26 Ecoli_55989_4970564_4976461 Sflexneri_2002017_1108069_1108337 427 859 45 477 433 433 98.38 19886 682 2.18 63.49 Ecoli_55989_4990618_5010503 Sflexneri_2002017_1094625_1095306 17694 18832 1 1139 1139 1139 99.74 19466 1140 5.85 99.91 Ecoli_55989_5011276_5030741 Sflexneri_2002017_4432277_4433416 817 1021 476 680 205 205 99.51 4715 682 4.35 30.06 Ecoli_55989_5033380_5038094 Sflexneri_2002017_1094625_1095306 1020 4708 1 3691 3689 3691 99.76 4715 3691 78.24 100.00 Ecoli_55989_5033380_5038094 Sflexneri_2002017_1096564_1100254 1 2489 77 2565 2489 2489 99.72 4839 2565 51.44 97.04 Ecoli_55989_5039421_5044259 Sflexneri_2002017_1101512_1104076 1 7115 7194 1 7115 7194 96.30 51091 11043 13.93 65.15 Ecoli_55989_5068310_5119400 Sflexneri_2002017_4410152_4421194 7117 11869 4972 220 4753 4753 98.00 51091 4972 9.30 95.60 Ecoli_55989_5068310_5119400 Sflexneri_2002017_4404402_4409373 24201 25173 1 973 973 973 95.07 51091 6784 1.90 14.34 Ecoli_55989_5068310_5119400 Sflexneri_2002017_4577389_4584172 25699 26089 1460 1850 391 391 95.91 51091 6784 0.77 5.76 Ecoli_55989_5068310_5119400 Sflexneri_2002017_4577389_4584172 26536 31059 2261 6784 4524 4524 98.63 51091 6784 8.85 66.69 Ecoli_55989_5068310_5119400 Sflexneri_2002017_4577389_4584172 32005 36293 1 4208 4289 4208 96.48 51091 28420 8.39 14.81 Ecoli_55989_5068310_5119400 Sflexneri_2002017_4584959_4613378 36310 36445 4348 4483 136 136 97.79 51091 28420 0.27 0.48 Ecoli_55989_5068310_5119400 Sflexneri_2002017_4584959_4613378 36594 48434 16598 28420 11841 11823 98.46 51091 28420 23.18 41.60 Ecoli_55989_5068310_5119400 Sflexneri_2002017_4584959_4613378 48652 51091 1 2440 2440 2440 98.52 51091 2440 4.78 100.00 Ecoli_55989_5068310_5119400 Sflexneri_2002017_4614158_4616597 1 32698 1 32706 32698 32706 97.24 32698 33936 100.00 96.38 Ecoli_55989_5119724_5152421 Sflexneri_2002017_4616921_4650857 1 1208 32717 33923 1208 1207 99.09 1208 33936 100.00 3.56 Ecoli_55989_5153655_5154863 Sflexneri_2002017_4616921_4650857 2637 8486 47351 53200 5850 5850 97.42 44563 53200 13.13 11.00 Ecoli_55989_555388_599950 Sflexneri_2002017_430375_483574 15817 17697 1 1870 1881 1870 97.82 44563 12208 4.22 15.32 Ecoli_55989_555388_599950 Sflexneri_2002017_484357_496564 22201 32608 1871 12208 10408 10338 97.98 44563 12208 23.36 84.68 Ecoli_55989_555388_599950 Sflexneri_2002017_484357_496564 36708 44443 1 7732 7736 7732 98.50 44563 12470 17.36 62.00 Ecoli_55989_555388_599950 Sflexneri_2002017_497347_509816 8668 13379 7759 12470 4712 4712 97.28 97530 12470 4.83 37.79 Ecoli_55989_601238_698767 Sflexneri_2002017_497347_509816 13385 22857 195 9678 9473 9484 98.18 97530 9678 9.71 98.00 Ecoli_55989_601238_698767 Sflexneri_2002017_514077_523754 22936 31872 1 8948 8937 8948 97.74 97530 9411 9.16 95.08 Ecoli_55989_601238_698767 Sflexneri_2002017_525278_534688 31913 32383 8941 9411 471 471 96.39 97530 9411 0.48 5.00 Ecoli_55989_601238_698767 Sflexneri_2002017_525278_534688 32392 49582 1 17090 17191 17090 97.78 97530 17090 17.63 100.00 Ecoli_55989_601238_698767 Sflexneri_2002017_535473_552562 49582 50693 1 1112 1112 1112 99.37 97530 1114 1.14 99.82 Ecoli_55989_601238_698767 Sflexneri_2002017_553814_554927 50693 53833 1 3142 3141 3142 98.92 97530 15933 3.22 19.72 Ecoli_55989_601238_698767 Sflexneri_2002017_556157_572089 53848 66510 3273 15933 12663 12661 98.82 97530 15933 12.98 79.46 Ecoli_55989_601238_698767 Sflexneri_2002017_556157_572089 68411 97530 41034 11914 29120 29121 98.85 97530 43891 29.86 66.35 Ecoli_55989_601238_698767 Sflexneri_2002017_669572_713462 1 4680 11919 7240 4680 4680 97.95 13932 43891 33.59 10.66 Ecoli_55989_700100_714031 Sflexneri_2002017_669572_713462 6860 13931 7072 1 7072 7072 98.30 13932 43891 50.76 16.11 Ecoli_55989_700100_714031 Sflexneri_2002017_669572_713462 1 118 118 1 118 118 100.00 119 119 99.16 99.16 Ecoli_55989_714540_714658 Sflexneri_2002017_668945_669063 5 2245 31029 28790 2241 2240 97.10 30465 31033 7.36 7.22 Ecoli_55989_714734_745198 Sflexneri_2002017_637837_668869 2275 10557 28620 20337 8283 8284 98.41 30465 31033 27.19 26.69 Ecoli_55989_714734_745198 Sflexneri_2002017_637837_668869 10500 30343 20264 430 19844 19835 97.84 30465 31033 65.14 63.92 Ecoli_55989_714734_745198 Sflexneri_2002017_637837_668869 35 2043 41478 39473 2009 2006 96.71 41315 46206 4.86 4.34 Ecoli_55989_753323_794637 Sflexneri_2002017_590852_637057 2063 19446 39346 21947 17384 17400 98.75 41315 46206 42.08 37.66 Ecoli_55989_753323_794637 Sflexneri_2002017_590852_637057 19482 41314 21811 1 21833 21811 98.67 41315 46206 52.85 47.20 Ecoli_55989_753323_794637 Sflexneri_2002017_590852_637057 1 16727 17373 640 16727 16734 98.58 18455 17408 90.64 96.13 Ecoli_55989_795727_814181 Sflexneri_2002017_572874_590281 16715 18455 296 2036 1741 1741 99.14 18455 5036 9.43 34.57 Ecoli_55989_795727_814181 Sflexneri_2002017_930946_935981 1 2179 2854 5032 2179 2179 98.85 2179 5036 100.00 43.27 Ecoli_55989_814951_817129 Sflexneri_2002017_930946_935981 1 1772 2 1773 1772 1772 99.21 100429 4728 1.76 37.48 Ecoli_55989_817258_917686 Sflexneri_2002017_936105_940832 1845 4901 1765 4728 3057 2964 95.09 100429 4728 3.04 62.69 Ecoli_55989_817258_917686 Sflexneri_2002017_936105_940832 8932 9175 1135 1378 244 244 88.52 100429 1413 0.24 17.27 Ecoli_55989_817258_917686 Sflexneri_2002017_1473076_1474488 19082 20667 21841 20270 1586 1572 91.30 100429 44673 1.58 3.52 Ecoli_55989_817258_917686 Sflexneri_2002017_2044001_2088673 49402 62896 1074 14570 13495 13497 98.34 100429 34969 13.44 38.60 Ecoli_55989_817258_917686 Sflexneri_2002017_761853_796821 63802 75035 14762 25996 11234 11235 98.28 100429 34969 11.19 32.13 Ecoli_55989_817258_917686 Sflexneri_2002017_761853_796821 75234 84210 25993 34969 8977 8977 98.28 100429 34969 8.94 25.67 Ecoli_55989_817258_917686 Sflexneri_2002017_761853_796821 84222 88564 1 4342 4343 4342 98.00 100429 9876 4.32 43.97 Ecoli_55989_817258_917686 Sflexneri_2002017_798271_808146 88573 93954 4495 9875 5382 5381 99.55 100429 9876 5.36 54.49 Ecoli_55989_817258_917686 Sflexneri_2002017_798271_808146 93949 100429 1 6480 6481 6480 98.47 100429 30661 6.45 21.13 Ecoli_55989_817258_917686 Sflexneri_2002017_808916_839576 1 6625 6623 13247 6625 6625 98.28 68092 30661 9.73 21.61 Ecoli_55989_919103_987194 Sflexneri_2002017_808916_839576 6627 23955 13340 30659 17329 17320 98.85 68092 30661 25.45 56.49 Ecoli_55989_919103_987194 Sflexneri_2002017_808916_839576 23957 46735 2 22775 22779 22774 98.55 68092 35750 33.45 63.70 Ecoli_55989_919103_987194 Sflexneri_2002017_840841_876590 46788 57207 25331 35750 10420 10420 98.38 68092 35750 15.30 29.15 Ecoli_55989_919103_987194 Sflexneri_2002017_840841_876590 57599 58333 343 1077 735 735 98.50 68092 1078 1.08 68.18 Ecoli_55989_919103_987194 Sflexneri_2002017_877938_879015 58332 68082 1 9749 9751 9749 98.33 68092 9858 14.32 98.89 Ecoli_55989_919103_987194 Sflexneri_2002017_879755_889612 13 9503 13 9464 9491 9452 98.68 9503 21236 99.87 44.51 Ecoli_55989_987330_996832 Sflexneri_2002017_889709_910944