/users/252891/scratch/edge/database/ecoli/results/Ecoli_55989_norepeats.fna /users/252891/scratch/edge/database/ecoli/results/Sflexneri_2a_2457T_norepeats.fna NUCMER [S1] [E1] [S2] [E2] [LEN 1] [LEN 2] [% IDY] [LEN R] [LEN Q] [COV R] [COV Q] [TAGS] 1 1663 19574 21237 1663 1664 98.20 38746 21237 4.29 7.84 Ecoli_55989_1007013_1045758 Sflexneri_2a_2457T_872163_893399 2697 3836 1140 1 1140 1140 98.25 38746 1140 2.94 100.00 Ecoli_55989_1007013_1045758 Sflexneri_2a_2457T_931929_933068 3854 4286 433 1 433 433 98.85 38746 433 1.12 100.00 Ecoli_55989_1007013_1045758 Sflexneri_2a_2457T_930703_931135 4419 4585 1 167 167 167 99.40 38746 167 0.43 100.00 Ecoli_55989_1007013_1045758 Sflexneri_2a_2457T_934349_934515 4597 14567 1 9906 9971 9906 98.35 38746 9906 25.73 100.00 Ecoli_55989_1007013_1045758 Sflexneri_2a_2457T_936570_946475 14559 35255 1 20692 20697 20692 98.92 38746 20692 53.42 100.00 Ecoli_55989_1007013_1045758 Sflexneri_2a_2457T_947906_968597 35287 38746 1 3461 3460 3461 98.99 38746 13935 8.93 24.84 Ecoli_55989_1007013_1045758 Sflexneri_2a_2457T_970067_984001 1 10324 3610 13935 10324 10326 98.99 59277 13935 17.42 74.10 Ecoli_55989_1047186_1106462 Sflexneri_2a_2457T_970067_984001 10342 13265 1 2926 2924 2926 98.33 59277 2926 4.93 100.00 Ecoli_55989_1047186_1106462 Sflexneri_2a_2457T_985355_988280 13655 13972 1 318 318 318 100.00 59277 318 0.54 100.00 Ecoli_55989_1047186_1106462 Sflexneri_2a_2457T_989062_989379 14833 37230 1 22403 22398 22403 98.76 59277 22403 37.79 100.00 Ecoli_55989_1047186_1106462 Sflexneri_2a_2457T_990181_1012583 37447 47367 2 9922 9921 9921 99.08 59277 28904 16.74 34.32 Ecoli_55989_1047186_1106462 Sflexneri_2a_2457T_1013647_1042550 51795 52123 1109 778 329 332 84.64 59277 1969 0.56 16.86 Ecoli_55989_1047186_1106462 Sflexneri_2a_2457T_1890263_1892231 52725 53760 6089 5058 1036 1032 93.64 59277 6523 1.75 15.82 Ecoli_55989_1047186_1106462 Sflexneri_2a_2457T_899785_906307 56761 57029 2849 2581 269 269 87.36 59277 6523 0.45 4.12 Ecoli_55989_1047186_1106462 Sflexneri_2a_2457T_899785_906307 58613 58826 908 695 214 214 88.79 59277 3358 0.36 6.37 Ecoli_55989_1047186_1106462 Sflexneri_2a_2457T_2039463_2042820 59036 59277 579 338 242 242 97.52 59277 3358 0.41 7.21 Ecoli_55989_1047186_1106462 Sflexneri_2a_2457T_2039463_2042820 1 158 333 176 158 158 98.73 158 3358 100.00 4.71 Ecoli_55989_1107244_1107401 Sflexneri_2a_2457T_2039463_2042820 1 622 1709 1088 622 622 93.25 2846 2814 21.86 22.10 Ecoli_55989_1109306_1112151 Sflexneri_2a_2457T_2036388_2039201 1953 2402 450 1 450 450 98.89 46114 5535 0.98 8.13 Ecoli_55989_1112994_1159107 Sflexneri_2a_2457T_1614241_1619775 27255 46114 9818 28662 18860 18845 98.41 46114 28904 40.90 65.20 Ecoli_55989_1112994_1159107 Sflexneri_2a_2457T_1013647_1042550 1 250 28655 28904 250 250 99.60 41094 28904 0.61 0.86 Ecoli_55989_1159877_1200970 Sflexneri_2a_2457T_1013647_1042550 267 10766 1 10448 10500 10448 98.02 41094 10450 25.55 99.98 Ecoli_55989_1159877_1200970 Sflexneri_2a_2457T_1043343_1053792 10774 16888 1 6116 6115 6116 96.80 41094 12700 14.88 48.16 Ecoli_55989_1159877_1200970 Sflexneri_2a_2457T_1054575_1067274 16929 23539 6091 12700 6611 6610 98.32 41094 12700 16.09 52.05 Ecoli_55989_1159877_1200970 Sflexneri_2a_2457T_1054575_1067274 30067 33202 1 3130 3136 3130 97.70 41094 4604 7.63 67.98 Ecoli_55989_1159877_1200970 Sflexneri_2a_2457T_1069105_1073708 33344 34688 3261 4604 1345 1344 97.99 41094 4604 3.27 29.19 Ecoli_55989_1159877_1200970 Sflexneri_2a_2457T_1069105_1073708 4 1646 1 1644 1643 1644 99.21 1646 1662 99.82 98.92 Ecoli_55989_1205818_1207463 Sflexneri_2a_2457T_1074971_1076632 1 3737 1 3738 3737 3738 99.06 107202 6829 3.49 54.74 Ecoli_55989_1207798_1314999 Sflexneri_2a_2457T_1076768_1083596 3785 6886 3728 6829 3102 3102 98.94 107202 6829 2.89 45.42 Ecoli_55989_1207798_1314999 Sflexneri_2a_2457T_1076768_1083596 6898 15884 1 8988 8987 8988 98.69 107202 8988 8.38 100.00 Ecoli_55989_1207798_1314999 Sflexneri_2a_2457T_1084753_1093740 17649 36902 950 20201 19254 19252 98.83 107202 95526 17.96 20.15 Ecoli_55989_1207798_1314999 Sflexneri_2a_2457T_1105010_1200535 37041 82741 20306 66016 45701 45711 98.80 107202 95526 42.63 47.85 Ecoli_55989_1207798_1314999 Sflexneri_2a_2457T_1105010_1200535 84033 89419 66021 71407 5387 5387 98.44 107202 95526 5.03 5.64 Ecoli_55989_1207798_1314999 Sflexneri_2a_2457T_1105010_1200535 89550 90768 71438 72656 1219 1219 99.43 107202 95526 1.14 1.28 Ecoli_55989_1207798_1314999 Sflexneri_2a_2457T_1105010_1200535 90759 98908 87376 95526 8150 8151 98.90 107202 95526 7.60 8.53 Ecoli_55989_1207798_1314999 Sflexneri_2a_2457T_1105010_1200535 104542 107202 1 2662 2661 2662 98.61 107202 9491 2.48 28.05 Ecoli_55989_1207798_1314999 Sflexneri_2a_2457T_1201320_1210810 1 6835 2657 9491 6835 6835 99.25 66418 9491 10.29 72.02 Ecoli_55989_1315771_1382188 Sflexneri_2a_2457T_1201320_1210810 6857 7434 1 566 578 566 96.54 66418 566 0.87 100.00 Ecoli_55989_1315771_1382188 Sflexneri_2a_2457T_1212147_1212712 7430 20251 1 12811 12822 12811 99.10 66418 26562 19.31 48.23 Ecoli_55989_1315771_1382188 Sflexneri_2a_2457T_1213969_1240530 20338 25119 14702 19483 4782 4782 98.54 66418 26562 7.20 18.00 Ecoli_55989_1315771_1382188 Sflexneri_2a_2457T_1213969_1240530 25163 49621 310 24841 24459 24532 98.85 66418 40798 36.83 60.13 Ecoli_55989_1315771_1382188 Sflexneri_2a_2457T_1241312_1282109 49685 58880 24370 33565 9196 9196 99.11 66418 40798 13.85 22.54 Ecoli_55989_1315771_1382188 Sflexneri_2a_2457T_1241312_1282109 59008 66236 33570 40798 7229 7229 98.78 66418 40798 10.88 17.72 Ecoli_55989_1315771_1382188 Sflexneri_2a_2457T_1241312_1282109 1 6768 11 6777 6768 6767 99.56 32270 6777 20.97 99.85 Ecoli_55989_1382402_1414671 Sflexneri_2a_2457T_1282554_1289330 7796 11955 1 4160 4160 4160 99.35 32270 4160 12.89 100.00 Ecoli_55989_1382402_1414671 Sflexneri_2a_2457T_1290792_1294951 11976 21740 1 9765 9765 9765 99.23 32270 9765 30.26 100.00 Ecoli_55989_1382402_1414671 Sflexneri_2a_2457T_1295749_1305513 21746 25835 1 4090 4090 4090 98.75 32270 58564 12.67 6.98 Ecoli_55989_1382402_1414671 Sflexneri_2a_2457T_1306759_1365322 331 1134 1092 289 804 804 88.56 3160 1092 25.44 73.63 Ecoli_55989_1422003_1425162 Sflexneri_2a_2457T_1914775_1915866 719 939 655 435 221 221 93.24 185688 5535 0.12 3.99 Ecoli_55989_1426005_1611692 Sflexneri_2a_2457T_1614241_1619775 2928 4070 1602 459 1143 1144 95.64 185688 1602 0.62 71.41 Ecoli_55989_1426005_1611692 Sflexneri_2a_2457T_237833_239434 7372 14104 368 7097 6733 6730 90.42 185688 20182 3.63 33.35 Ecoli_55989_1426005_1611692 Sflexneri_2a_2457T_722039_742220 24727 26709 17783 19765 1983 1983 92.25 185688 20182 1.07 9.83 Ecoli_55989_1426005_1611692 Sflexneri_2a_2457T_722039_742220 32300 78235 3970 49892 45936 45923 98.79 185688 58564 24.74 78.42 Ecoli_55989_1426005_1611692 Sflexneri_2a_2457T_1306759_1365322 78362 87031 49894 58564 8670 8671 96.76 185688 58564 4.67 14.81 Ecoli_55989_1426005_1611692 Sflexneri_2a_2457T_1306759_1365322 87044 106445 1 19374 19402 19374 97.56 185688 20776 10.45 93.25 Ecoli_55989_1426005_1611692 Sflexneri_2a_2457T_1366111_1386886 106445 106583 20039 20177 139 139 97.12 185688 20776 0.07 0.67 Ecoli_55989_1426005_1611692 Sflexneri_2a_2457T_1366111_1386886 106600 108142 291 1833 1543 1543 97.80 185688 1833 0.83 84.18 Ecoli_55989_1426005_1611692 Sflexneri_2a_2457T_1388342_1390174 108151 111697 1 3547 3547 3547 98.59 185688 3547 1.91 100.00 Ecoli_55989_1426005_1611692 Sflexneri_2a_2457T_1391450_1394996 111696 114914 1 3219 3219 3219 98.82 185688 5159 1.73 62.40 Ecoli_55989_1426005_1611692 Sflexneri_2a_2457T_1398064_1403222 120055 120379 3317 3642 325 326 84.40 185688 5159 0.18 6.32 Ecoli_55989_1426005_1611692 Sflexneri_2a_2457T_1398064_1403222 120491 132896 2085 14480 12406 12396 98.73 185688 14480 6.68 85.61 Ecoli_55989_1426005_1611692 Sflexneri_2a_2457T_1404908_1419387 132894 138057 5164 1 5164 5164 98.76 185688 5165 2.78 99.98 Ecoli_55989_1426005_1611692 Sflexneri_2a_2457T_1420168_1425332 157817 164081 1 6264 6265 6264 97.38 185688 6264 3.37 100.00 Ecoli_55989_1426005_1611692 Sflexneri_2a_2457T_1426108_1432371 164098 169637 4 5546 5540 5543 97.38 185688 5546 2.98 99.95 Ecoli_55989_1426005_1611692 Sflexneri_2a_2457T_1433646_1439191 170044 174667 1 4624 4624 4624 98.64 185688 4624 2.49 100.00 Ecoli_55989_1426005_1611692 Sflexneri_2a_2457T_1440478_1445101 174751 185688 1 10926 10938 10926 99.21 185688 10926 5.89 100.00 Ecoli_55989_1426005_1611692 Sflexneri_2a_2457T_1446631_1457556 9496 15302 5807 1 5807 5807 98.92 31364 5807 18.51 100.00 Ecoli_55989_1613438_1644801 Sflexneri_2a_2457T_1844638_1850444 15309 17401 2092 1 2093 2092 98.04 31364 2092 6.67 100.00 Ecoli_55989_1613438_1644801 Sflexneri_2a_2457T_1841204_1843295 4981 11501 6524 1 6521 6524 99.06 139677 6524 4.67 100.00 Ecoli_55989_1645715_1785391 Sflexneri_2a_2457T_1832846_1839369 11504 12756 12658 11406 1253 1253 99.44 139677 12658 0.90 9.90 Ecoli_55989_1645715_1785391 Sflexneri_2a_2457T_1819409_1832066 12751 19040 9866 3581 6290 6286 98.84 139677 12658 4.50 49.66 Ecoli_55989_1645715_1785391 Sflexneri_2a_2457T_1819409_1832066 19040 22450 3404 1 3411 3404 97.69 139677 12658 2.44 26.89 Ecoli_55989_1645715_1785391 Sflexneri_2a_2457T_1819409_1832066 23115 26574 11106 7648 3460 3459 97.86 139677 11106 2.48 31.15 Ecoli_55989_1645715_1785391 Sflexneri_2a_2457T_1807531_1818636 29393 30599 7649 6443 1207 1207 98.34 139677 11106 0.86 10.87 Ecoli_55989_1645715_1785391 Sflexneri_2a_2457T_1807531_1818636 32719 39156 6442 1 6438 6442 98.43 139677 11106 4.61 58.00 Ecoli_55989_1645715_1785391 Sflexneri_2a_2457T_1807531_1818636 39165 41645 2481 1 2481 2481 99.07 139677 2481 1.78 100.00 Ecoli_55989_1645715_1785391 Sflexneri_2a_2457T_1804266_1806746 41658 49036 7367 1 7379 7367 98.59 139677 7367 5.28 100.00 Ecoli_55989_1645715_1785391 Sflexneri_2a_2457T_1796111_1803477 49042 54219 1 5177 5178 5177 98.69 139677 5177 3.71 100.00 Ecoli_55989_1645715_1785391 Sflexneri_2a_2457T_1607338_1612514 69302 76110 202 7010 6809 6809 98.18 139677 7010 4.87 97.13 Ecoli_55989_1645715_1785391 Sflexneri_2a_2457T_1651215_1658224 76119 79023 2889 2 2905 2888 98.11 139677 2889 2.08 99.97 Ecoli_55989_1645715_1785391 Sflexneri_2a_2457T_1647029_1649917 79024 84700 12900 7248 5677 5653 98.70 139677 12905 4.06 43.80 Ecoli_55989_1645715_1785391 Sflexneri_2a_2457T_1632443_1645347 86110 90625 7247 2730 4516 4518 98.36 139677 12905 3.23 35.01 Ecoli_55989_1645715_1785391 Sflexneri_2a_2457T_1632443_1645347 96912 97940 2691 1663 1029 1029 99.03 139677 12905 0.74 7.97 Ecoli_55989_1645715_1785391 Sflexneri_2a_2457T_1632443_1645347 97934 98064 1534 1664 131 131 99.24 139677 12905 0.09 1.02 Ecoli_55989_1645715_1785391 Sflexneri_2a_2457T_1632443_1645347 98068 99604 1535 1 1537 1535 99.28 139677 12905 1.10 11.89 Ecoli_55989_1645715_1785391 Sflexneri_2a_2457T_1632443_1645347 100942 108672 7731 1 7731 7731 98.78 139677 7731 5.53 100.00 Ecoli_55989_1645715_1785391 Sflexneri_2a_2457T_1623436_1631166 115535 116314 19900 19124 780 777 92.96 139677 20182 0.56 3.85 Ecoli_55989_1645715_1785391 Sflexneri_2a_2457T_722039_742220 117216 122467 18155 12922 5252 5234 91.90 139677 20182 3.76 25.93 Ecoli_55989_1645715_1785391 Sflexneri_2a_2457T_722039_742220 122715 127649 12680 7754 4935 4927 90.96 139677 20182 3.53 24.41 Ecoli_55989_1645715_1785391 Sflexneri_2a_2457T_722039_742220 1 4028 1505 5535 4028 4031 98.11 6095 5535 66.09 72.83 Ecoli_55989_1785568_1791662 Sflexneri_2a_2457T_1614241_1619775 4047 4501 858 1309 455 452 88.84 6095 6523 7.47 6.93 Ecoli_55989_1785568_1791662 Sflexneri_2a_2457T_899785_906307 290 5857 2 5570 5568 5569 98.83 225334 10953 2.47 50.84 Ecoli_55989_1802540_2027873 Sflexneri_2a_2457T_1660810_1671762 5841 8624 1094 3877 2784 2784 98.35 225334 39986 1.24 6.96 Ecoli_55989_1802540_2027873 Sflexneri_2a_2457T_1673015_1713000 9010 29250 3878 24135 20241 20258 98.94 225334 39986 8.98 50.66 Ecoli_55989_1802540_2027873 Sflexneri_2a_2457T_1673015_1713000 29258 37758 25886 34387 8501 8502 98.67 225334 39986 3.77 21.26 Ecoli_55989_1802540_2027873 Sflexneri_2a_2457T_1673015_1713000 37759 40119 34569 36929 2361 2361 98.94 225334 39986 1.05 5.90 Ecoli_55989_1802540_2027873 Sflexneri_2a_2457T_1673015_1713000 40567 43624 36930 39986 3058 3057 98.20 225334 39986 1.36 7.65 Ecoli_55989_1802540_2027873 Sflexneri_2a_2457T_1673015_1713000 43643 55174 1 11533 11532 11533 99.18 225334 20885 5.12 55.22 Ecoli_55989_1802540_2027873 Sflexneri_2a_2457T_1713796_1734680 54777 64430 11232 20885 9654 9654 98.32 225334 20885 4.28 46.22 Ecoli_55989_1802540_2027873 Sflexneri_2a_2457T_1713796_1734680 64427 75559 1 11133 11133 11133 99.11 225334 15586 4.94 71.43 Ecoli_55989_1802540_2027873 Sflexneri_2a_2457T_1736013_1751598 75707 79809 11122 15225 4103 4104 98.68 225334 15586 1.82 26.33 Ecoli_55989_1802540_2027873 Sflexneri_2a_2457T_1736013_1751598 79814 94438 1 14638 14625 14638 98.98 225334 21274 6.49 68.81 Ecoli_55989_1802540_2027873 Sflexneri_2a_2457T_1752990_1774263 94621 101257 14639 21274 6637 6636 99.04 225334 21274 2.95 31.19 Ecoli_55989_1802540_2027873 Sflexneri_2a_2457T_1752990_1774263 101264 121582 1 20271 20319 20271 98.77 225334 20280 9.02 99.96 Ecoli_55989_1802540_2027873 Sflexneri_2a_2457T_1775046_1795325 124928 149555 24631 1 24628 24631 98.85 225334 24634 10.93 99.99 Ecoli_55989_1802540_2027873 Sflexneri_2a_2457T_1581922_1606555 150134 158501 8364 1 8368 8364 98.59 225334 8364 3.71 100.00 Ecoli_55989_1802540_2027873 Sflexneri_2a_2457T_1572771_1581134 158513 164670 6159 1 6158 6159 98.75 225334 6159 2.73 100.00 Ecoli_55989_1802540_2027873 Sflexneri_2a_2457T_1565825_1571983 164675 182289 17604 1 17615 17604 98.55 225334 17604 7.82 100.00 Ecoli_55989_1802540_2027873 Sflexneri_2a_2457T_1547440_1565043 182282 183633 6051 4701 1352 1351 97.63 225334 6051 0.60 22.33 Ecoli_55989_1802540_2027873 Sflexneri_2a_2457T_1539958_1546008 183669 188396 4711 1 4728 4711 97.04 225334 6051 2.10 77.85 Ecoli_55989_1802540_2027873 Sflexneri_2a_2457T_1539958_1546008 188412 210786 25658 3281 22375 22378 98.88 225334 25658 9.93 87.22 Ecoli_55989_1802540_2027873 Sflexneri_2a_2457T_1512949_1538606 210879 214159 3281 1 3281 3281 98.84 225334 25658 1.46 12.79 Ecoli_55989_1802540_2027873 Sflexneri_2a_2457T_1512949_1538606 218141 219146 7154 6149 1006 1006 99.50 225334 7154 0.45 14.06 Ecoli_55989_1802540_2027873 Sflexneri_2a_2457T_1504525_1511678 219350 224954 6155 556 5605 5600 98.59 225334 7154 2.49 78.28 Ecoli_55989_1802540_2027873 Sflexneri_2a_2457T_1504525_1511678 14 18674 1 18660 18661 18660 98.94 215263 18660 8.67 100.00 Ecoli_55989_1_215263 Sflexneri_2a_2457T_1_18660 22436 44121 4 21673 21686 21670 98.12 215263 66977 10.07 32.35 Ecoli_55989_1_215263 Sflexneri_2a_2457T_19440_86416 44222 89508 21658 66977 45287 45320 98.71 215263 66977 21.04 67.67 Ecoli_55989_1_215263 Sflexneri_2a_2457T_19440_86416 89519 116484 1 26965 26966 26965 98.87 215263 60411 12.53 44.64 Ecoli_55989_1_215263 Sflexneri_2a_2457T_87204_147614 116721 130101 26965 40333 13381 13369 98.53 215263 60411 6.22 22.13 Ecoli_55989_1_215263 Sflexneri_2a_2457T_87204_147614 129944 150085 40272 60411 20142 20140 98.10 215263 60411 9.36 33.34 Ecoli_55989_1_215263 Sflexneri_2a_2457T_87204_147614 157226 215263 1 58036 58038 58036 98.85 215263 65457 26.96 88.66 Ecoli_55989_1_215263 Sflexneri_2a_2457T_148394_213850 5954 26031 20072 1 20078 20072 98.85 30191 21268 66.50 94.38 Ecoli_55989_2029623_2059813 Sflexneri_2a_2457T_1481978_1503245 26033 30190 17260 13102 4158 4159 99.23 30191 17262 13.77 24.09 Ecoli_55989_2029623_2059813 Sflexneri_2a_2457T_1463940_1481201 1 13122 13109 1 13122 13109 98.40 81447 17262 16.11 75.94 Ecoli_55989_2060582_2142028 Sflexneri_2a_2457T_1463940_1481201 13140 13736 693 97 597 597 98.83 81447 693 0.73 86.15 Ecoli_55989_2060582_2142028 Sflexneri_2a_2457T_1461963_1462655 13705 39219 1524 27040 25515 25517 98.86 81447 29470 31.33 86.59 Ecoli_55989_2060582_2142028 Sflexneri_2a_2457T_1854646_1884115 39223 41524 27169 29470 2302 2302 99.22 81447 29470 2.83 7.81 Ecoli_55989_2060582_2142028 Sflexneri_2a_2457T_1854646_1884115 41533 41967 1 435 435 435 98.62 81447 2319 0.53 18.76 Ecoli_55989_2060582_2142028 Sflexneri_2a_2457T_1885574_1887892 42349 53116 165 10930 10768 10766 98.88 81447 10931 13.22 98.49 Ecoli_55989_2060582_2142028 Sflexneri_2a_2457T_1921868_1932798 53114 56768 1 3653 3655 3653 98.85 81447 4173 4.49 87.54 Ecoli_55989_2060582_2142028 Sflexneri_2a_2457T_1934090_1938262 56856 68523 444 12111 11668 11668 98.96 81447 12111 14.33 96.34 Ecoli_55989_2060582_2142028 Sflexneri_2a_2457T_1941220_1953330 70865 81447 1 10572 10583 10572 98.30 81447 10868 12.99 97.28 Ecoli_55989_2060582_2142028 Sflexneri_2a_2457T_1954114_1964981 1 7307 58151 65457 7307 7307 98.84 7307 65457 100.00 11.16 Ecoli_55989_216657_223963 Sflexneri_2a_2457T_148394_213850 1 175 10694 10868 175 175 99.43 175 10868 100.00 1.61 Ecoli_55989_2177794_2177968 Sflexneri_2a_2457T_1954114_1964981 1 3962 1 3962 3962 3962 98.81 43097 44695 9.19 8.86 Ecoli_55989_2178042_2221138 Sflexneri_2a_2457T_1965055_2009749 4100 10115 3963 9980 6016 6018 97.77 43097 44695 13.96 13.46 Ecoli_55989_2178042_2221138 Sflexneri_2a_2457T_1965055_2009749 10418 11000 10886 11468 583 583 86.69 43097 44695 1.35 1.30 Ecoli_55989_2178042_2221138 Sflexneri_2a_2457T_1965055_2009749 12565 17522 13051 18003 4958 4953 98.02 43097 44695 11.50 11.08 Ecoli_55989_2178042_2221138 Sflexneri_2a_2457T_1965055_2009749 17509 18170 19203 19861 662 659 90.39 43097 44695 1.54 1.47 Ecoli_55989_2178042_2221138 Sflexneri_2a_2457T_1965055_2009749 18174 25952 21741 29522 7779 7782 98.02 43097 44695 18.05 17.41 Ecoli_55989_2178042_2221138 Sflexneri_2a_2457T_1965055_2009749 26045 40471 29516 43965 14427 14450 97.47 43097 44695 33.48 32.33 Ecoli_55989_2178042_2221138 Sflexneri_2a_2457T_1965055_2009749 40627 41357 43965 44695 731 731 95.35 43097 44695 1.70 1.64 Ecoli_55989_2178042_2221138 Sflexneri_2a_2457T_1965055_2009749 1 440 305 745 440 441 92.76 449 745 98.00 59.19 Ecoli_55989_2223624_2224072 Sflexneri_2a_2457T_2013076_2013820 6 6938 1 6943 6933 6943 96.78 7935 7184 87.37 96.65 Ecoli_55989_2224844_2232778 Sflexneri_2a_2457T_2014606_2021789 6877 7935 2300 3358 1059 1059 98.58 7935 3358 13.35 31.54 Ecoli_55989_2224844_2232778 Sflexneri_2a_2457T_2039463_2042820 1 1513 1 1513 1513 1513 99.21 39805 1513 3.80 100.00 Ecoli_55989_2232884_2272688 Sflexneri_2a_2457T_2042926_2044438 36050 36529 1 480 480 480 99.17 39805 480 1.21 100.00 Ecoli_55989_2232884_2272688 Sflexneri_2a_2457T_2045690_2046169 36538 39805 1 3272 3268 3272 98.38 39805 3272 8.21 100.00 Ecoli_55989_2232884_2272688 Sflexneri_2a_2457T_2047445_2050716 1 1723 1 1707 1723 1707 96.92 1723 1707 100.00 100.00 Ecoli_55989_2272791_2274513 Sflexneri_2a_2457T_2050819_2052525 1 2304 1 2305 2304 2305 97.14 2304 2305 100.00 100.00 Ecoli_55989_2274599_2276902 Sflexneri_2a_2457T_2052611_2054915 1 3352 1 3352 3352 3352 97.94 76219 3352 4.40 100.00 Ecoli_55989_2277004_2353222 Sflexneri_2a_2457T_2055017_2058368 12290 12834 672 1217 545 546 92.86 76219 2631 0.72 20.75 Ecoli_55989_2277004_2353222 Sflexneri_2a_2457T_3067734_3070364 32545 33842 305 1602 1298 1298 99.23 76219 1603 1.70 80.97 Ecoli_55989_2277004_2353222 Sflexneri_2a_2457T_2061073_2062675 36822 43482 1 6661 6661 6661 98.41 76219 6661 8.74 100.00 Ecoli_55989_2277004_2353222 Sflexneri_2a_2457T_2071283_2077943 43495 52764 4 9351 9270 9348 94.15 76219 38778 12.16 24.11 Ecoli_55989_2277004_2353222 Sflexneri_2a_2457T_2078729_2117506 52794 55305 9334 11847 2512 2514 94.83 76219 38778 3.30 6.48 Ecoli_55989_2277004_2353222 Sflexneri_2a_2457T_2078729_2117506 65288 66248 23138 24098 961 961 94.80 76219 38778 1.26 2.48 Ecoli_55989_2277004_2353222 Sflexneri_2a_2457T_2078729_2117506 67625 71618 24254 28247 3994 3994 95.92 76219 38778 5.24 10.30 Ecoli_55989_2277004_2353222 Sflexneri_2a_2457T_2078729_2117506 71716 76219 28249 32743 4504 4495 96.83 76219 38778 5.91 11.59 Ecoli_55989_2277004_2353222 Sflexneri_2a_2457T_2078729_2117506 1 963 1 964 963 964 97.61 963 981 100.00 98.27 Ecoli_55989_229639_230601 Sflexneri_2a_2457T_219389_220369 35 7185 1 7139 7151 7139 98.27 7185 7139 99.53 100.00 Ecoli_55989_231940_239124 Sflexneri_2a_2457T_221825_228963 1 77 32752 32828 77 77 98.70 80 38778 96.25 0.20 Ecoli_55989_2353319_2353398 Sflexneri_2a_2457T_2078729_2117506 1 5940 32840 38778 5940 5939 97.53 72862 38778 8.15 15.32 Ecoli_55989_2353495_2426356 Sflexneri_2a_2457T_2078729_2117506 6988 10332 1 3346 3345 3346 97.64 72862 13788 4.59 24.27 Ecoli_55989_2353495_2426356 Sflexneri_2a_2457T_2118292_2132079 10491 16510 3420 9439 6020 6020 98.42 72862 13788 8.26 43.66 Ecoli_55989_2353495_2426356 Sflexneri_2a_2457T_2118292_2132079 16510 20681 9616 13785 4172 4170 99.07 72862 13788 5.73 30.24 Ecoli_55989_2353495_2426356 Sflexneri_2a_2457T_2118292_2132079 20694 29539 2 8902 8846 8901 97.43 72862 8902 12.14 99.99 Ecoli_55989_2353495_2426356 Sflexneri_2a_2457T_2133537_2142438 30778 42091 1 11302 11314 11302 97.93 72862 16751 15.53 67.47 Ecoli_55989_2353495_2426356 Sflexneri_2a_2457T_2143898_2160648 42872 48296 11325 16751 5425 5427 98.25 72862 16751 7.45 32.40 Ecoli_55989_2353495_2426356 Sflexneri_2a_2457T_2143898_2160648 48305 53997 1 5696 5693 5696 97.84 72862 18079 7.81 31.51 Ecoli_55989_2353495_2426356 Sflexneri_2a_2457T_2161434_2179512 55489 67885 5697 18079 12397 12383 97.83 72862 18079 17.01 68.49 Ecoli_55989_2353495_2426356 Sflexneri_2a_2457T_2161434_2179512 67887 72071 1 4184 4185 4184 97.59 72862 4184 5.74 100.00 Ecoli_55989_2353495_2426356 Sflexneri_2a_2457T_2180291_2184474 72075 72622 1 548 548 548 98.54 72862 548 0.75 100.00 Ecoli_55989_2353495_2426356 Sflexneri_2a_2457T_2185745_2186292 72630 72860 1 231 231 231 100.00 72862 14312 0.32 1.61 Ecoli_55989_2353495_2426356 Sflexneri_2a_2457T_2187077_2201388 1 258 429 686 258 258 100.00 22366 686 1.15 37.61 Ecoli_55989_2427125_2449490 Sflexneri_2a_2457T_2202169_2202854 275 3161 1 2887 2887 2887 99.34 22366 2887 12.91 100.00 Ecoli_55989_2427125_2449490 Sflexneri_2a_2457T_2203647_2206533 3153 3309 1 157 157 157 98.73 22366 641 0.70 24.49 Ecoli_55989_2427125_2449490 Sflexneri_2a_2457T_2207961_2208601 3285 3519 383 618 235 236 97.03 22366 618 1.05 38.19 Ecoli_55989_2427125_2449490 Sflexneri_2a_2457T_2215431_2216048 3523 8046 1 4528 4524 4528 98.43 22366 49534 20.23 9.14 Ecoli_55989_2427125_2449490 Sflexneri_2a_2457T_2217361_2266894 8034 22366 4557 18874 14333 14318 98.28 22366 49534 64.08 28.91 Ecoli_55989_2427125_2449490 Sflexneri_2a_2457T_2217361_2266894 1 17974 18878 36712 17974 17835 97.79 197191 49534 9.12 36.01 Ecoli_55989_2449619_2646809 Sflexneri_2a_2457T_2217361_2266894 18328 30796 37066 49534 12469 12469 98.07 197191 49534 6.32 25.17 Ecoli_55989_2449619_2646809 Sflexneri_2a_2457T_2217361_2266894 30804 55759 1 24956 24956 24956 98.66 197191 58022 12.66 43.01 Ecoli_55989_2449619_2646809 Sflexneri_2a_2457T_2267678_2325699 55735 88683 25108 58022 32949 32915 98.47 197191 58022 16.71 56.73 Ecoli_55989_2449619_2646809 Sflexneri_2a_2457T_2267678_2325699 88694 100598 1 11917 11905 11917 97.79 197191 11917 6.04 100.00 Ecoli_55989_2449619_2646809 Sflexneri_2a_2457T_2326965_2338881 100621 103760 1 3140 3140 3140 98.79 197191 34864 1.59 9.01 Ecoli_55989_2449619_2646809 Sflexneri_2a_2457T_2340224_2375087 103834 135303 3359 34862 31470 31504 98.35 197191 34864 15.96 90.36 Ecoli_55989_2449619_2646809 Sflexneri_2a_2457T_2340224_2375087 136118 137580 1 1479 1463 1479 95.47 197191 67659 0.74 2.19 Ecoli_55989_2449619_2646809 Sflexneri_2a_2457T_2375871_2443529 137752 197191 1471 60880 59440 59410 98.84 197191 67659 30.14 87.81 Ecoli_55989_2449619_2646809 Sflexneri_2a_2457T_2375871_2443529 1 6688 60974 67659 6688 6686 99.33 100885 67659 6.63 9.88 Ecoli_55989_2648182_2749066 Sflexneri_2a_2457T_2375871_2443529 6691 17794 1 11111 11104 11111 98.54 100885 11111 11.01 100.00 Ecoli_55989_2648182_2749066 Sflexneri_2a_2457T_2444309_2455419 29772 31419 9620 7974 1648 1647 88.98 100885 12648 1.63 13.02 Ecoli_55989_2648182_2749066 Sflexneri_2a_2457T_242033_254680 31587 33219 7806 6175 1633 1632 93.70 100885 12648 1.62 12.90 Ecoli_55989_2648182_2749066 Sflexneri_2a_2457T_242033_254680 41592 41824 15 247 233 233 95.28 100885 1602 0.23 14.54 Ecoli_55989_2648182_2749066 Sflexneri_2a_2457T_237833_239434 60277 83285 1 22999 23009 22999 98.96 100885 40309 22.81 57.06 Ecoli_55989_2648182_2749066 Sflexneri_2a_2457T_2457279_2497587 83489 100885 22992 40309 17397 17318 98.11 100885 40309 17.24 42.96 Ecoli_55989_2648182_2749066 Sflexneri_2a_2457T_2457279_2497587 9 6561 8455 15007 6553 6553 98.21 12796 28663 51.21 22.86 Ecoli_55989_272091_284886 Sflexneri_2a_2457T_281654_310316 7550 8076 15245 15771 527 527 94.69 12796 28663 4.12 1.84 Ecoli_55989_272091_284886 Sflexneri_2a_2457T_281654_310316 8871 12461 16667 20257 3591 3591 96.66 12796 28663 28.06 12.53 Ecoli_55989_272091_284886 Sflexneri_2a_2457T_281654_310316 12455 12796 21010 21351 342 342 98.25 12796 28663 2.67 1.19 Ecoli_55989_272091_284886 Sflexneri_2a_2457T_281654_310316 1 2702 1 2702 2702 2702 99.63 2702 2702 100.00 100.00 Ecoli_55989_2749260_2751961 Sflexneri_2a_2457T_2497781_2500482 4410 16184 606 12380 11775 11775 99.18 38553 93364 30.54 12.61 Ecoli_55989_2752549_2791101 Sflexneri_2a_2457T_2500758_2594121 16188 21167 13346 18326 4980 4981 97.81 38553 93364 12.92 5.34 Ecoli_55989_2752549_2791101 Sflexneri_2a_2457T_2500758_2594121 21171 25570 18463 22863 4400 4401 98.27 38553 93364 11.41 4.71 Ecoli_55989_2752549_2791101 Sflexneri_2a_2457T_2500758_2594121 26755 33682 22864 29791 6928 6928 98.53 38553 93364 17.97 7.42 Ecoli_55989_2752549_2791101 Sflexneri_2a_2457T_2500758_2594121 35895 36962 39001 40068 1068 1068 99.25 38553 93364 2.77 1.14 Ecoli_55989_2752549_2791101 Sflexneri_2a_2457T_2500758_2594121 6370 28509 40062 62263 22140 22202 98.15 157841 93364 14.03 23.78 Ecoli_55989_2791384_2949224 Sflexneri_2a_2457T_2500758_2594121 29336 47293 62331 80324 17958 17994 98.90 157841 93364 11.38 19.27 Ecoli_55989_2791384_2949224 Sflexneri_2a_2457T_2500758_2594121 47231 60282 80318 93364 13052 13047 99.10 157841 93364 8.27 13.97 Ecoli_55989_2791384_2949224 Sflexneri_2a_2457T_2500758_2594121 60285 63434 1 3151 3150 3151 99.27 157841 34750 2.00 9.07 Ecoli_55989_2791384_2949224 Sflexneri_2a_2457T_2595390_2630139 63434 79574 18608 34750 16141 16143 98.99 157841 34750 10.23 46.45 Ecoli_55989_2791384_2949224 Sflexneri_2a_2457T_2595390_2630139 85335 86022 1 692 688 692 94.37 157841 47270 0.44 1.46 Ecoli_55989_2791384_2949224 Sflexneri_2a_2457T_2631598_2678867 85833 88523 824 3515 2691 2692 99.33 157841 47270 1.70 5.69 Ecoli_55989_2791384_2949224 Sflexneri_2a_2457T_2631598_2678867 88692 116065 3565 30957 27374 27393 98.57 157841 47270 17.34 57.95 Ecoli_55989_2791384_2949224 Sflexneri_2a_2457T_2631598_2678867 116080 131564 31106 46572 15485 15467 98.68 157841 47270 9.81 32.72 Ecoli_55989_2791384_2949224 Sflexneri_2a_2457T_2631598_2678867 131527 146112 1318 15902 14586 14585 98.84 157841 27458 9.24 53.12 Ecoli_55989_2791384_2949224 Sflexneri_2a_2457T_2689016_2716473 146290 157841 15906 27458 11552 11553 99.04 157841 27458 7.32 42.08 Ecoli_55989_2791384_2949224 Sflexneri_2a_2457T_2689016_2716473 1 7342 21352 28663 7342 7312 97.30 93662 28663 7.84 25.51 Ecoli_55989_286225_379886 Sflexneri_2a_2457T_281654_310316 7357 10034 1 2678 2678 2678 98.84 93662 2678 2.86 100.00 Ecoli_55989_286225_379886 Sflexneri_2a_2457T_311107_313784 51882 56063 4183 1 4182 4183 98.71 93662 4183 4.46 100.00 Ecoli_55989_286225_379886 Sflexneri_2a_2457T_276675_280857 1 85 1 85 85 85 98.82 98793 85 0.09 100.00 Ecoli_55989_2954733_3053525 Sflexneri_2a_2457T_2721894_2721978 109 5433 5324 1 5325 5324 99.17 98793 5324 5.39 100.00 Ecoli_55989_2954733_3053525 Sflexneri_2a_2457T_2723426_2728749 5447 25808 1 20360 20362 20360 98.62 98793 20491 20.61 99.36 Ecoli_55989_2954733_3053525 Sflexneri_2a_2457T_2730216_2750706 41431 45407 1 3975 3977 3975 97.56 98793 11515 4.03 34.52 Ecoli_55989_2954733_3053525 Sflexneri_2a_2457T_2752789_2764303 45446 49900 3969 8423 4455 4455 97.73 98793 11515 4.51 38.69 Ecoli_55989_2954733_3053525 Sflexneri_2a_2457T_2752789_2764303 50136 53065 8586 11515 2930 2930 98.46 98793 11515 2.97 25.45 Ecoli_55989_2954733_3053525 Sflexneri_2a_2457T_2752789_2764303 53075 73611 1 20533 20537 20533 98.68 98793 20536 20.79 99.99 Ecoli_55989_2954733_3053525 Sflexneri_2a_2457T_2765649_2786184 74648 91389 1 16741 16742 16741 98.94 98793 33124 16.95 50.54 Ecoli_55989_2954733_3053525 Sflexneri_2a_2457T_2786684_2819807 91421 95705 16676 20960 4285 4285 97.81 98793 33124 4.34 12.94 Ecoli_55989_2954733_3053525 Sflexneri_2a_2457T_2786684_2819807 3402 15567 20951 33124 12166 12174 98.40 76988 33124 15.80 36.75 Ecoli_55989_3054904_3131891 Sflexneri_2a_2457T_2786684_2819807 15572 21272 1 5697 5701 5697 98.93 76988 5697 7.41 100.00 Ecoli_55989_3054904_3131891 Sflexneri_2a_2457T_2820589_2826285 25954 39315 3443 16802 13362 13360 98.34 76988 29795 17.36 44.84 Ecoli_55989_3054904_3131891 Sflexneri_2a_2457T_2827746_2857540 46963 59898 16861 29795 12936 12935 97.66 76988 29795 16.80 43.41 Ecoli_55989_3054904_3131891 Sflexneri_2a_2457T_2827746_2857540 66374 67383 1 1010 1010 1010 99.01 76988 1010 1.31 100.00 Ecoli_55989_3054904_3131891 Sflexneri_2a_2457T_2858329_2859338 67390 72360 1 4933 4971 4933 98.15 76988 21249 6.46 23.22 Ecoli_55989_3054904_3131891 Sflexneri_2a_2457T_2860121_2881369 73051 76988 4987 8924 3938 3938 98.86 76988 21249 5.12 18.53 Ecoli_55989_3054904_3131891 Sflexneri_2a_2457T_2860121_2881369 1 12319 8929 21246 12319 12318 99.00 31866 21249 38.66 57.97 Ecoli_55989_3132672_3164537 Sflexneri_2a_2457T_2860121_2881369 12337 30525 1 18187 18189 18187 98.83 31866 19689 57.08 92.37 Ecoli_55989_3132672_3164537 Sflexneri_2a_2457T_2882823_2902511 30530 31866 18353 19689 1337 1337 98.58 31866 19689 4.20 6.79 Ecoli_55989_3132672_3164537 Sflexneri_2a_2457T_2882823_2902511 1 39960 3 39987 39960 39985 98.82 101446 39987 39.39 100.00 Ecoli_55989_3164837_3266282 Sflexneri_2a_2457T_2902700_2942686 57521 58305 1 785 785 785 96.82 101446 12163 0.77 6.45 Ecoli_55989_3164837_3266282 Sflexneri_2a_2457T_2943946_2956108 58289 63320 7132 12163 5032 5032 99.40 101446 12163 4.96 41.37 Ecoli_55989_3164837_3266282 Sflexneri_2a_2457T_2943946_2956108 90012 101446 1 11435 11435 11435 98.75 101446 40563 11.27 28.19 Ecoli_55989_3164837_3266282 Sflexneri_2a_2457T_2956892_2997454 1 27833 11592 39429 27833 27838 98.74 29135 40563 95.53 68.63 Ecoli_55989_3267599_3296733 Sflexneri_2a_2457T_2956892_2997454 27832 27976 25113 24969 145 145 85.62 29135 58022 0.50 0.25 Ecoli_55989_3267599_3296733 Sflexneri_2a_2457T_2267678_2325699 27968 29135 39396 40563 1168 1168 99.40 29135 40563 4.01 2.88 Ecoli_55989_3267599_3296733 Sflexneri_2a_2457T_2956892_2997454 1 9137 1 9137 9137 9137 98.93 58193 9137 15.70 100.00 Ecoli_55989_3296857_3355049 Sflexneri_2a_2457T_2997578_3006714 11024 11148 1 125 125 125 99.20 58193 6044 0.21 2.07 Ecoli_55989_3296857_3355049 Sflexneri_2a_2457T_3007503_3013546 11383 16049 1378 6044 4667 4667 98.07 58193 6044 8.02 77.22 Ecoli_55989_3296857_3355049 Sflexneri_2a_2457T_3007503_3013546 16464 30976 1 14514 14513 14514 98.31 58193 16380 24.94 88.61 Ecoli_55989_3296857_3355049 Sflexneri_2a_2457T_3014328_3030707 31177 44543 1356 14724 13367 13369 98.74 58193 18807 22.97 71.09 Ecoli_55989_3296857_3355049 Sflexneri_2a_2457T_3031478_3050284 16394 17251 259 1118 858 860 92.33 61930 2631 1.39 32.69 Ecoli_55989_3414773_3476702 Sflexneri_2a_2457T_3067734_3070364 19303 34239 1709 16760 14937 15052 94.28 61930 19608 24.12 76.76 Ecoli_55989_3414773_3476702 Sflexneri_2a_2457T_3071698_3091305 34330 35619 17134 18422 1290 1289 92.18 61930 19608 2.08 6.57 Ecoli_55989_3414773_3476702 Sflexneri_2a_2457T_3071698_3091305 52644 61930 1302 10487 9287 9186 97.53 61930 72068 15.00 12.75 Ecoli_55989_3414773_3476702 Sflexneri_2a_2457T_3095026_3167093 1 13420 15160 28579 13420 13420 97.94 13420 72068 100.00 18.62 Ecoli_55989_3477477_3490896 Sflexneri_2a_2457T_3095026_3167093 1 270 28663 28932 270 270 98.15 131016 72068 0.21 0.37 Ecoli_55989_3492259_3623274 Sflexneri_2a_2457T_3095026_3167093 270 10879 29053 39662 10610 10610 99.00 131016 72068 8.10 14.72 Ecoli_55989_3492259_3623274 Sflexneri_2a_2457T_3095026_3167093 10880 43126 39896 72068 32247 32173 98.61 131016 72068 24.61 44.64 Ecoli_55989_3492259_3623274 Sflexneri_2a_2457T_3095026_3167093 47865 48698 1 834 834 834 98.32 131016 834 0.64 100.00 Ecoli_55989_3492259_3623274 Sflexneri_2a_2457T_3169410_3170243 50101 51768 1 1667 1668 1667 98.56 131016 21624 1.27 7.71 Ecoli_55989_3492259_3623274 Sflexneri_2a_2457T_3171021_3192644 51037 63707 1313 13980 12671 12668 98.19 131016 21624 9.67 58.58 Ecoli_55989_3492259_3623274 Sflexneri_2a_2457T_3171021_3192644 63770 71418 13975 21624 7649 7650 99.05 131016 21624 5.84 35.38 Ecoli_55989_3492259_3623274 Sflexneri_2a_2457T_3171021_3192644 71445 87777 1 16306 16333 16306 98.46 131016 34765 12.47 46.90 Ecoli_55989_3492259_3623274 Sflexneri_2a_2457T_3194109_3228873 87814 90582 16243 19011 2769 2769 97.98 131016 34765 2.11 7.96 Ecoli_55989_3492259_3623274 Sflexneri_2a_2457T_3194109_3228873 90582 95569 19336 24332 4988 4997 97.38 131016 34765 3.81 14.37 Ecoli_55989_3492259_3623274 Sflexneri_2a_2457T_3194109_3228873 95790 105814 24739 34765 10025 10027 99.21 131016 34765 7.65 28.84 Ecoli_55989_3492259_3623274 Sflexneri_2a_2457T_3194109_3228873 107967 112098 1 4118 4132 4118 98.50 131016 35216 3.15 11.69 Ecoli_55989_3492259_3623274 Sflexneri_2a_2457T_3229670_3264885 112180 114055 4104 5979 1876 1876 99.09 131016 35216 1.43 5.33 Ecoli_55989_3492259_3623274 Sflexneri_2a_2457T_3229670_3264885 114708 116637 6193 8122 1930 1930 98.19 131016 35216 1.47 5.48 Ecoli_55989_3492259_3623274 Sflexneri_2a_2457T_3229670_3264885 116637 131016 8273 22641 14380 14369 98.44 131016 35216 10.98 40.80 Ecoli_55989_3492259_3623274 Sflexneri_2a_2457T_3229670_3264885 1 6616 23181 29797 6616 6617 98.76 50404 35216 13.13 18.79 Ecoli_55989_3625206_3675609 Sflexneri_2a_2457T_3229670_3264885 7622 12971 29867 35216 5350 5350 98.26 50404 35216 10.61 15.19 Ecoli_55989_3625206_3675609 Sflexneri_2a_2457T_3229670_3264885 16523 19577 1 3056 3055 3056 99.64 50404 3056 6.06 100.00 Ecoli_55989_3625206_3675609 Sflexneri_2a_2457T_3265669_3268724 19584 22603 1 3019 3020 3019 98.68 50404 3019 5.99 100.00 Ecoli_55989_3625206_3675609 Sflexneri_2a_2457T_3269508_3272526 22603 35439 1 12838 12837 12838 98.43 50404 27654 25.47 46.42 Ecoli_55989_3625206_3675609 Sflexneri_2a_2457T_3273860_3301513 35564 50404 12838 27654 14841 14817 98.80 50404 27654 29.44 53.58 Ecoli_55989_3625206_3675609 Sflexneri_2a_2457T_3273860_3301513 1 12139 1 12142 12139 12142 99.24 97366 42987 12.47 28.25 Ecoli_55989_3675684_3773049 Sflexneri_2a_2457T_3301588_3344574 12143 42852 12292 42986 30710 30695 98.92 97366 42987 31.54 71.41 Ecoli_55989_3675684_3773049 Sflexneri_2a_2457T_3301588_3344574 42851 49088 1 6239 6238 6239 98.81 97366 6239 6.41 100.00 Ecoli_55989_3675684_3773049 Sflexneri_2a_2457T_3345803_3352041 49099 86738 1 37619 37640 37619 99.07 97366 37619 38.66 100.00 Ecoli_55989_3675684_3773049 Sflexneri_2a_2457T_3352828_3390446 92817 94624 1 1797 1808 1797 98.17 97366 1797 1.86 100.00 Ecoli_55989_3675684_3773049 Sflexneri_2a_2457T_3391231_3393027 94638 97214 1 2577 2577 2577 98.41 97366 2800 2.65 92.04 Ecoli_55989_3675684_3773049 Sflexneri_2a_2457T_3393817_3396616 1 111 2690 2800 111 111 100.00 111 2800 100.00 3.96 Ecoli_55989_3773178_3773288 Sflexneri_2a_2457T_3393817_3396616 1 8983 1 9018 8983 9018 98.25 26037 9018 34.50 100.00 Ecoli_55989_3778640_3804676 Sflexneri_2a_2457T_3401967_3410984 10528 26036 15509 1 15509 15509 99.54 26037 15510 59.57 99.99 Ecoli_55989_3778640_3804676 Sflexneri_2a_2457T_4333284_4348793 1 63168 72718 9568 63168 63151 98.41 189210 72719 33.39 86.84 Ecoli_55989_3805860_3995069 Sflexneri_2a_2457T_4259382_4332100 63955 73478 9524 1 9524 9524 98.28 189210 72719 5.03 13.10 Ecoli_55989_3805860_3995069 Sflexneri_2a_2457T_4259382_4332100 73527 92905 19947 576 19379 19372 98.27 189210 20676 10.24 93.69 Ecoli_55989_3805860_3995069 Sflexneri_2a_2457T_4237359_4258034 96348 96654 307 1 307 307 92.86 189210 20676 0.16 1.48 Ecoli_55989_3805860_3995069 Sflexneri_2a_2457T_4237359_4258034 96670 114181 66637 49126 17512 17512 98.97 189210 66637 9.26 26.28 Ecoli_55989_3805860_3995069 Sflexneri_2a_2457T_4169270_4235906 116863 158789 49063 7210 41927 41854 97.72 189210 66637 22.16 62.81 Ecoli_55989_3805860_3995069 Sflexneri_2a_2457T_4169270_4235906 158935 161824 7082 4235 2890 2848 93.50 189210 66637 1.53 4.27 Ecoli_55989_3805860_3995069 Sflexneri_2a_2457T_4169270_4235906 5371 17506 12142 1 12136 12142 98.04 136806 12626 8.87 96.17 Ecoli_55989_3995839_4132644 Sflexneri_2a_2457T_4149623_4162248 17513 19717 1 2205 2205 2205 97.78 136806 2205 1.61 100.00 Ecoli_55989_3995839_4132644 Sflexneri_2a_2457T_4146626_4148830 20201 29397 9186 1 9197 9186 97.40 136806 9186 6.72 100.00 Ecoli_55989_3995839_4132644 Sflexneri_2a_2457T_4136664_4145849 29403 38489 199 9285 9087 9087 99.44 136806 9285 6.64 97.87 Ecoli_55989_3995839_4132644 Sflexneri_2a_2457T_4072045_4081329 38658 40566 1909 1 1909 1909 99.32 136806 1909 1.40 100.00 Ecoli_55989_3995839_4132644 Sflexneri_2a_2457T_4133475_4135383 40571 45379 48547 43739 4809 4809 99.06 136806 48547 3.52 9.91 Ecoli_55989_3995839_4132644 Sflexneri_2a_2457T_4083486_4132032 45610 57274 43560 31889 11665 11672 98.98 136806 48547 8.53 24.04 Ecoli_55989_3995839_4132644 Sflexneri_2a_2457T_4083486_4132032 58411 70106 31895 20200 11696 11696 99.03 136806 48547 8.55 24.09 Ecoli_55989_3995839_4132644 Sflexneri_2a_2457T_4083486_4132032 70185 76702 21089 14571 6518 6519 97.21 136806 48547 4.76 13.43 Ecoli_55989_3995839_4132644 Sflexneri_2a_2457T_4083486_4132032 76699 81161 14417 9955 4463 4463 98.07 136806 48547 3.26 9.19 Ecoli_55989_3995839_4132644 Sflexneri_2a_2457T_4083486_4132032 86950 96807 9858 1 9858 9858 98.67 136806 48547 7.21 20.31 Ecoli_55989_3995839_4132644 Sflexneri_2a_2457T_4083486_4132032 97029 118619 21501 1 21591 21501 98.68 136806 21501 15.78 100.00 Ecoli_55989_3995839_4132644 Sflexneri_2a_2457T_4049764_4071264 119234 120806 1573 1 1573 1573 99.62 136806 1573 1.15 100.00 Ecoli_55989_3995839_4132644 Sflexneri_2a_2457T_4047403_4048975 129037 136731 14418 6724 7695 7695 98.25 136806 14418 5.62 53.37 Ecoli_55989_3995839_4132644 Sflexneri_2a_2457T_4032205_4046622 6501 11572 5353 282 5072 5072 98.99 22006 5353 23.05 94.75 Ecoli_55989_404478_426483 Sflexneri_2a_2457T_270041_275393 13852 14773 9600 8679 922 922 98.81 22006 9601 4.19 9.60 Ecoli_55989_404478_426483 Sflexneri_2a_2457T_256077_265677 14893 22006 8679 1566 7114 7114 99.45 22006 9601 32.33 74.10 Ecoli_55989_404478_426483 Sflexneri_2a_2457T_256077_265677 3410 4470 6691 5632 1061 1060 98.49 183014 14418 0.58 7.35 Ecoli_55989_4138723_4321736 Sflexneri_2a_2457T_4032205_4046622 4509 7370 5643 2782 2862 2862 98.29 183014 14418 1.56 19.85 Ecoli_55989_4138723_4321736 Sflexneri_2a_2457T_4032205_4046622 7508 10287 2779 1 2780 2779 98.92 183014 14418 1.52 19.27 Ecoli_55989_4138723_4321736 Sflexneri_2a_2457T_4032205_4046622 10299 12007 18046 16338 1709 1709 99.71 183014 18046 0.93 9.47 Ecoli_55989_4138723_4321736 Sflexneri_2a_2457T_4013372_4031417 12116 28522 16355 1 16407 16355 97.85 183014 18046 8.96 90.63 Ecoli_55989_4138723_4321736 Sflexneri_2a_2457T_4013372_4031417 29423 44758 15336 1 15336 15336 99.02 183014 15336 8.38 100.00 Ecoli_55989_4138723_4321736 Sflexneri_2a_2457T_3997261_4012596 44767 54093 33516 24190 9327 9327 99.08 183014 33516 5.10 27.83 Ecoli_55989_4138723_4321736 Sflexneri_2a_2457T_3962961_3996476 54307 63612 23976 14672 9306 9305 99.11 183014 33516 5.08 27.76 Ecoli_55989_4138723_4321736 Sflexneri_2a_2457T_3962961_3996476 63744 72616 14672 5799 8873 8874 99.30 183014 33516 4.85 26.48 Ecoli_55989_4138723_4321736 Sflexneri_2a_2457T_3962961_3996476 76335 90011 1 13678 13677 13678 98.46 183014 48317 7.47 28.31 Ecoli_55989_4138723_4321736 Sflexneri_2a_2457T_3861899_3910215 90186 124819 13714 48317 34634 34604 98.57 183014 48317 18.92 71.62 Ecoli_55989_4138723_4321736 Sflexneri_2a_2457T_3861899_3910215 124841 129851 2 5011 5011 5010 98.82 183014 5011 2.74 99.98 Ecoli_55989_4138723_4321736 Sflexneri_2a_2457T_3911012_3916022 129852 134503 1 4641 4652 4641 97.01 183014 4641 2.54 100.00 Ecoli_55989_4138723_4321736 Sflexneri_2a_2457T_3917290_3921930 134506 139123 1 4611 4618 4611 98.85 183014 4611 2.52 100.00 Ecoli_55989_4138723_4321736 Sflexneri_2a_2457T_3924675_3929285 139140 149076 1 9924 9937 9924 98.85 183014 9924 5.43 100.00 Ecoli_55989_4138723_4321736 Sflexneri_2a_2457T_3930078_3940001 149071 151784 1 2714 2714 2714 99.67 183014 2714 1.48 100.00 Ecoli_55989_4138723_4321736 Sflexneri_2a_2457T_3940772_3943485 151792 153364 1573 1 1573 1573 99.55 183014 1573 0.86 100.00 Ecoli_55989_4138723_4321736 Sflexneri_2a_2457T_3855672_3857244 153384 172746 19363 1 19363 19363 99.14 183014 19363 10.58 100.00 Ecoli_55989_4138723_4321736 Sflexneri_2a_2457T_3834851_3854213 172764 175688 2925 1 2925 2925 99.38 183014 2925 1.60 100.00 Ecoli_55989_4138723_4321736 Sflexneri_2a_2457T_3830472_3833396 175704 183013 7310 1 7310 7310 98.92 183014 7310 3.99 100.00 Ecoli_55989_4138723_4321736 Sflexneri_2a_2457T_3822370_3829679 1 1572 1572 1 1572 1572 97.90 127361 9601 1.23 16.37 Ecoli_55989_427254_554614 Sflexneri_2a_2457T_256077_265677 1570 6590 1 5021 5021 5021 99.60 127361 45786 3.94 10.97 Ecoli_55989_427254_554614 Sflexneri_2a_2457T_331984_377769 6591 42961 5342 41698 36371 36357 98.47 127361 45786 28.56 79.41 Ecoli_55989_427254_554614 Sflexneri_2a_2457T_331984_377769 45828 51213 1 5392 5386 5392 99.18 127361 5392 4.23 100.00 Ecoli_55989_427254_554614 Sflexneri_2a_2457T_378548_383939 51851 76023 1 24167 24173 24167 99.04 127361 24167 18.98 100.00 Ecoli_55989_427254_554614 Sflexneri_2a_2457T_386692_410858 76039 97878 1 21835 21840 21835 99.13 127361 53200 17.15 41.04 Ecoli_55989_427254_554614 Sflexneri_2a_2457T_412312_465511 98036 108674 21889 32527 10639 10639 99.19 127361 53200 8.35 20.00 Ecoli_55989_427254_554614 Sflexneri_2a_2457T_412312_465511 108639 122689 32593 46643 14051 14051 98.48 127361 53200 11.03 26.41 Ecoli_55989_427254_554614 Sflexneri_2a_2457T_412312_465511 1 1880 34737 32858 1880 1880 99.41 35658 34738 5.27 5.41 Ecoli_55989_4327242_4362899 Sflexneri_2a_2457T_3782125_3816862 1917 12883 32862 21997 10967 10866 96.97 35658 34738 30.76 31.28 Ecoli_55989_4327242_4362899 Sflexneri_2a_2457T_3782125_3816862 13729 35657 21929 1 21929 21929 98.91 35658 34738 61.50 63.13 Ecoli_55989_4327242_4362899 Sflexneri_2a_2457T_3782125_3816862 1 1656 1656 1 1656 1656 97.89 56048 1657 2.95 99.94 Ecoli_55989_4362986_4419033 Sflexneri_2a_2457T_3780382_3782038 1661 10276 8610 1 8616 8610 98.51 56048 8610 15.37 100.00 Ecoli_55989_4362986_4419033 Sflexneri_2a_2457T_3770432_3779041 10302 12728 8741 6327 2427 2415 95.84 56048 8741 4.33 27.63 Ecoli_55989_4362986_4419033 Sflexneri_2a_2457T_3760889_3769629 13693 20137 6445 1 6445 6445 98.03 56048 8741 11.50 73.73 Ecoli_55989_4362986_4419033 Sflexneri_2a_2457T_3760889_3769629 20160 21797 34233 32596 1638 1638 97.92 56048 34233 2.92 4.78 Ecoli_55989_4362986_4419033 Sflexneri_2a_2457T_3725196_3759428 24490 34097 31675 22068 9608 9608 98.86 56048 34233 17.14 28.07 Ecoli_55989_4362986_4419033 Sflexneri_2a_2457T_3725196_3759428 34124 56047 21923 1 21924 21923 98.92 56048 34233 39.12 64.04 Ecoli_55989_4362986_4419033 Sflexneri_2a_2457T_3725196_3759428 1 15518 22260 6704 15518 15557 98.42 84545 22263 18.35 69.88 Ecoli_55989_4424595_4509139 Sflexneri_2a_2457T_3697376_3719638 15691 22333 6644 1 6643 6644 98.77 84545 22263 7.86 29.84 Ecoli_55989_4424595_4509139 Sflexneri_2a_2457T_3697376_3719638 31320 34272 3470 518 2953 2953 99.19 84545 14976 3.49 19.72 Ecoli_55989_4424595_4509139 Sflexneri_2a_2457T_3681619_3696594 36050 44261 8211 1 8212 8211 98.94 84545 9919 9.71 82.78 Ecoli_55989_4424595_4509139 Sflexneri_2a_2457T_3670920_3680838 46594 59848 13245 1 13255 13245 98.06 84545 13245 15.68 100.00 Ecoli_55989_4424595_4509139 Sflexneri_2a_2457T_3656881_3670125 59855 84438 55410 30735 24584 24676 98.86 84545 55410 29.08 44.53 Ecoli_55989_4424595_4509139 Sflexneri_2a_2457T_3600129_3655538 1703 2337 30724 30091 635 634 97.96 43392 55410 1.46 1.14 Ecoli_55989_4512854_4556245 Sflexneri_2a_2457T_3600129_3655538 2345 32379 29957 1 30035 29957 98.05 43392 55410 69.22 54.06 Ecoli_55989_4512854_4556245 Sflexneri_2a_2457T_3600129_3655538 32389 34408 2021 1 2020 2021 98.22 43392 2022 4.66 99.95 Ecoli_55989_4512854_4556245 Sflexneri_2a_2457T_3596660_3598681 34406 43391 8977 1 8986 8977 98.72 43392 8977 20.71 100.00 Ecoli_55989_4512854_4556245 Sflexneri_2a_2457T_3586908_3595884 161 3593 3433 1 3433 3433 99.62 3679 3439 93.31 99.83 Ecoli_55989_4561654_4565332 Sflexneri_2a_2457T_3578079_3581517 1 116 116 1 116 116 98.28 391 117 29.67 99.15 Ecoli_55989_4565415_4565805 Sflexneri_2a_2457T_3577795_3577911 191 390 200 1 200 200 100.00 391 200 51.15 100.00 Ecoli_55989_4565415_4565805 Sflexneri_2a_2457T_3577521_3577720 1 12496 29921 17426 12496 12496 99.71 30694 29922 40.71 41.76 Ecoli_55989_4566989_4597682 Sflexneri_2a_2457T_3546416_3576337 13451 21652 17391 9189 8202 8203 98.68 30694 29922 26.72 27.41 Ecoli_55989_4566989_4597682 Sflexneri_2a_2457T_3546416_3576337 21652 30693 9042 1 9042 9042 98.82 30694 29922 29.46 30.22 Ecoli_55989_4566989_4597682 Sflexneri_2a_2457T_3546416_3576337 1 4914 24077 19163 4914 4915 98.23 148099 24080 3.32 20.41 Ecoli_55989_4603089_4751187 Sflexneri_2a_2457T_3516934_3541013 4859 7177 19316 16998 2319 2319 99.48 148099 24080 1.57 9.63 Ecoli_55989_4603089_4751187 Sflexneri_2a_2457T_3516934_3541013 7178 16053 16385 7511 8876 8875 98.13 148099 24080 5.99 36.86 Ecoli_55989_4603089_4751187 Sflexneri_2a_2457T_3516934_3541013 16149 17054 1220 315 906 906 97.68 148099 24080 0.61 3.76 Ecoli_55989_4603089_4751187 Sflexneri_2a_2457T_3516934_3541013 17059 17236 178 1 178 178 99.44 148099 24080 0.12 0.74 Ecoli_55989_4603089_4751187 Sflexneri_2a_2457T_3516934_3541013 17252 17345 1 94 94 94 100.00 148099 94 0.06 100.00 Ecoli_55989_4603089_4751187 Sflexneri_2a_2457T_4385623_4385716 20889 24413 51 3575 3525 3525 99.35 148099 42792 2.38 8.24 Ecoli_55989_4603089_4751187 Sflexneri_2a_2457T_3413810_3456601 24414 63549 3682 42792 39136 39111 98.62 148099 42792 26.43 91.40 Ecoli_55989_4603089_4751187 Sflexneri_2a_2457T_3413810_3456601 63547 66743 1 3187 3197 3187 98.84 148099 29044 2.16 10.97 Ecoli_55989_4603089_4751187 Sflexneri_2a_2457T_3457375_3486418 66722 92448 3325 29044 25727 25720 98.56 148099 29044 17.37 88.56 Ecoli_55989_4603089_4751187 Sflexneri_2a_2457T_3457375_3486418 104746 133147 6 28406 28402 28401 98.81 148099 28406 19.18 99.98 Ecoli_55989_4603089_4751187 Sflexneri_2a_2457T_3487195_3515600 143376 143735 1 361 360 361 97.51 148099 12146 0.24 2.97 Ecoli_55989_4603089_4751187 Sflexneri_2a_2457T_4458026_4470171 143714 148098 18382 13998 4385 4385 99.93 148099 19608 2.96 22.36 Ecoli_55989_4603089_4751187 Sflexneri_2a_2457T_3071698_3091305 2 10383 1290 11655 10382 10366 99.43 10977 11655 94.58 88.94 Ecoli_55989_4754766_4765742 Sflexneri_2a_2457T_3944827_3956481 1 327 1292 966 327 327 97.55 5731 11655 5.71 2.81 Ecoli_55989_4781370_4787100 Sflexneri_2a_2457T_3944827_3956481 9 1275 1260 1 1267 1260 95.51 5731 2118 22.11 59.49 Ecoli_55989_4781370_4787100 Sflexneri_2a_2457T_3957265_3959382 356 1723 8765 7398 1368 1368 99.63 1723 16435 79.40 8.32 Ecoli_55989_4793213_4794935 Sflexneri_2a_2457T_3050506_3066940 1 6575 6959 385 6575 6575 99.98 6575 16435 100.00 40.01 Ecoli_55989_4795374_4801948 Sflexneri_2a_2457T_3050506_3066940 1 5692 18806 13115 5692 5692 99.82 35373 18807 16.09 30.27 Ecoli_55989_4802555_4837927 Sflexneri_2a_2457T_3031478_3050284 5455 17376 225 12146 11922 11922 99.18 35373 12146 33.70 98.16 Ecoli_55989_4802555_4837927 Sflexneri_2a_2457T_4458026_4470171 17386 27018 1 9630 9633 9630 98.90 35373 10183 27.23 94.57 Ecoli_55989_4802555_4837927 Sflexneri_2a_2457T_4470957_4481139 27009 28316 2 1299 1308 1298 98.09 35373 7789 3.70 16.66 Ecoli_55989_4802555_4837927 Sflexneri_2a_2457T_4481319_4489107 29059 35373 1487 7789 6315 6303 98.42 35373 7789 17.85 80.92 Ecoli_55989_4802555_4837927 Sflexneri_2a_2457T_4481319_4489107 1 17386 1 17385 17386 17385 98.87 35919 17385 48.40 100.00 Ecoli_55989_4838226_4874144 Sflexneri_2a_2457T_4489638_4507022 19492 22894 1 3403 3403 3403 97.59 35919 3403 9.47 100.00 Ecoli_55989_4838226_4874144 Sflexneri_2a_2457T_4507811_4511213 22895 31781 1 8885 8887 8885 98.28 35919 11638 24.74 76.34 Ecoli_55989_4838226_4874144 Sflexneri_2a_2457T_4511991_4523628 32387 35126 8899 11638 2740 2740 99.09 35919 11638 7.63 23.54 Ecoli_55989_4838226_4874144 Sflexneri_2a_2457T_4511991_4523628 35628 35919 26273 25982 292 292 98.97 35919 28333 0.81 1.03 Ecoli_55989_4838226_4874144 Sflexneri_2a_2457T_4426114_4454446 2 415 25978 25565 414 414 99.28 41331 28333 1.00 1.46 Ecoli_55989_4875895_4917225 Sflexneri_2a_2457T_4426114_4454446 497 9510 25576 16566 9014 9011 98.29 41331 28333 21.81 31.80 Ecoli_55989_4875895_4917225 Sflexneri_2a_2457T_4426114_4454446 9519 19175 15337 5680 9657 9658 99.02 41331 28333 23.37 34.09 Ecoli_55989_4875895_4917225 Sflexneri_2a_2457T_4426114_4454446 19810 21806 5551 3557 1997 1995 97.35 41331 28333 4.83 7.04 Ecoli_55989_4875895_4917225 Sflexneri_2a_2457T_4426114_4454446 21996 25529 3537 4 3534 3534 96.77 41331 28333 8.55 12.47 Ecoli_55989_4875895_4917225 Sflexneri_2a_2457T_4426114_4454446 25548 28162 21500 18886 2615 2615 98.78 41331 21500 6.33 12.16 Ecoli_55989_4875895_4917225 Sflexneri_2a_2457T_4403161_4424660 28219 41331 18897 5798 13113 13100 98.80 41331 21500 31.73 60.93 Ecoli_55989_4875895_4917225 Sflexneri_2a_2457T_4403161_4424660 1 5556 5664 108 5556 5557 97.05 48675 21500 11.41 25.85 Ecoli_55989_4918638_4967312 Sflexneri_2a_2457T_4403161_4424660 6614 19240 15378 2756 12627 12623 97.51 48675 15389 25.94 82.03 Ecoli_55989_4918638_4967312 Sflexneri_2a_2457T_4386978_4402366 24331 25683 2666 1314 1353 1353 95.34 48675 15389 2.78 8.79 Ecoli_55989_4918638_4967312 Sflexneri_2a_2457T_4386978_4402366 3578 4166 10183 9629 589 555 93.04 19466 10183 3.03 5.45 Ecoli_55989_5011276_5030741 Sflexneri_2a_2457T_4470957_4481139 17694 18832 1 1139 1139 1139 99.74 19466 1140 5.85 99.91 Ecoli_55989_5011276_5030741 Sflexneri_2a_2457T_4380928_4382067 1 7115 7193 1 7115 7193 96.33 51091 11043 13.93 65.14 Ecoli_55989_5068310_5119400 Sflexneri_2a_2457T_4358803_4369845 7115 11869 4974 220 4755 4755 97.98 51091 4974 9.31 95.60 Ecoli_55989_5068310_5119400 Sflexneri_2a_2457T_4353053_4358026 24198 25173 1 976 976 976 95.08 51091 6781 1.91 14.39 Ecoli_55989_5068310_5119400 Sflexneri_2a_2457T_4525873_4532653 25699 26089 1463 1847 391 385 94.37 51091 6781 0.77 5.68 Ecoli_55989_5068310_5119400 Sflexneri_2a_2457T_4525873_4532653 26536 31059 2258 6781 4524 4524 98.61 51091 6781 8.85 66.72 Ecoli_55989_5068310_5119400 Sflexneri_2a_2457T_4525873_4532653 32005 36293 1 4208 4289 4208 96.48 51091 28434 8.39 14.80 Ecoli_55989_5068310_5119400 Sflexneri_2a_2457T_4533440_4561873 36310 36445 4348 4483 136 136 97.79 51091 28434 0.27 0.48 Ecoli_55989_5068310_5119400 Sflexneri_2a_2457T_4533440_4561873 36594 48434 16598 28434 11841 11837 98.60 51091 28434 23.18 41.63 Ecoli_55989_5068310_5119400 Sflexneri_2a_2457T_4533440_4561873 48652 51091 1 2440 2440 2440 98.57 51091 2440 4.78 100.00 Ecoli_55989_5068310_5119400 Sflexneri_2a_2457T_4562653_4565092 1 32698 1 32708 32698 32708 97.25 32698 33939 100.00 96.37 Ecoli_55989_5119724_5152421 Sflexneri_2a_2457T_4565416_4599355 1 1208 32719 33926 1208 1208 99.09 1208 33939 100.00 3.56 Ecoli_55989_5153655_5154863 Sflexneri_2a_2457T_4565416_4599355 2637 8486 47351 53200 5850 5850 97.45 44563 53200 13.13 11.00 Ecoli_55989_555388_599950 Sflexneri_2a_2457T_412312_465511 15817 17697 1 1881 1881 1881 98.41 44563 12220 4.22 15.39 Ecoli_55989_555388_599950 Sflexneri_2a_2457T_466294_478513 22201 32608 1882 12220 10408 10339 97.98 44563 12220 23.36 84.61 Ecoli_55989_555388_599950 Sflexneri_2a_2457T_466294_478513 36708 44443 1 7732 7736 7732 98.50 44563 12470 17.36 62.00 Ecoli_55989_555388_599950 Sflexneri_2a_2457T_479296_491765 8668 13379 7759 12470 4712 4712 97.31 97530 12470 4.83 37.79 Ecoli_55989_601238_698767 Sflexneri_2a_2457T_479296_491765 13385 22857 195 9678 9473 9484 98.18 97530 9678 9.71 98.00 Ecoli_55989_601238_698767 Sflexneri_2a_2457T_496026_505703 22936 31872 1 8948 8937 8948 97.75 97530 9411 9.16 95.08 Ecoli_55989_601238_698767 Sflexneri_2a_2457T_507227_516637 31913 32383 8941 9411 471 471 96.39 97530 9411 0.48 5.00 Ecoli_55989_601238_698767 Sflexneri_2a_2457T_507227_516637 32392 49582 1 17090 17191 17090 97.78 97530 17091 17.63 99.99 Ecoli_55989_601238_698767 Sflexneri_2a_2457T_517422_534512 49581 50693 1 1113 1113 1113 99.37 97530 1115 1.14 99.82 Ecoli_55989_601238_698767 Sflexneri_2a_2457T_535762_536876 50693 53833 1 3142 3141 3142 98.92 97530 15932 3.22 19.72 Ecoli_55989_601238_698767 Sflexneri_2a_2457T_538106_554037 53848 66510 3273 15932 12663 12660 98.84 97530 15932 12.98 79.46 Ecoli_55989_601238_698767 Sflexneri_2a_2457T_538106_554037 68411 97530 41032 11913 29120 29120 98.88 97530 43892 29.86 66.34 Ecoli_55989_601238_698767 Sflexneri_2a_2457T_651522_695413 1 4680 11918 7240 4680 4679 97.93 13932 43892 33.59 10.66 Ecoli_55989_700100_714031 Sflexneri_2a_2457T_651522_695413 6860 13931 7072 1 7072 7072 98.30 13932 43892 50.76 16.11 Ecoli_55989_700100_714031 Sflexneri_2a_2457T_651522_695413 1 118 118 1 118 118 100.00 119 119 99.16 99.16 Ecoli_55989_714540_714658 Sflexneri_2a_2457T_650895_651013 5 2245 31028 28789 2241 2240 97.10 30465 31032 7.36 7.22 Ecoli_55989_714734_745198 Sflexneri_2a_2457T_619788_650819 2275 10557 28619 20336 8283 8284 98.39 30465 31032 27.19 26.70 Ecoli_55989_714734_745198 Sflexneri_2a_2457T_619788_650819 10500 30343 20263 429 19844 19835 97.84 30465 31032 65.14 63.92 Ecoli_55989_714734_745198 Sflexneri_2a_2457T_619788_650819 35 2043 41479 39474 2009 2006 96.71 41315 46207 4.86 4.34 Ecoli_55989_753323_794637 Sflexneri_2a_2457T_572800_619006 2063 19446 39347 21947 17384 17401 98.75 41315 46207 42.08 37.66 Ecoli_55989_753323_794637 Sflexneri_2a_2457T_572800_619006 19482 41314 21811 1 21833 21811 98.68 41315 46207 52.85 47.20 Ecoli_55989_753323_794637 Sflexneri_2a_2457T_572800_619006 1 16727 17373 640 16727 16734 98.58 18455 17408 90.64 96.13 Ecoli_55989_795727_814181 Sflexneri_2a_2457T_554822_572229 16715 18455 296 2036 1741 1741 99.14 18455 5036 9.43 34.57 Ecoli_55989_795727_814181 Sflexneri_2a_2457T_916058_921093 1 2179 2854 5032 2179 2179 98.85 2179 5036 100.00 43.27 Ecoli_55989_814951_817129 Sflexneri_2a_2457T_916058_921093 1 1772 2 1773 1772 1772 99.21 100429 4728 1.76 37.48 Ecoli_55989_817258_917686 Sflexneri_2a_2457T_921217_925944 1845 4901 1765 4728 3057 2964 95.09 100429 4728 3.04 62.69 Ecoli_55989_817258_917686 Sflexneri_2a_2457T_921217_925944 8932 9175 278 35 244 244 88.52 100429 1413 0.24 17.27 Ecoli_55989_817258_917686 Sflexneri_2a_2457T_1897171_1898583 19082 20667 21838 20267 1586 1572 91.30 100429 44695 1.58 3.52 Ecoli_55989_817258_917686 Sflexneri_2a_2457T_1965055_2009749 21233 21534 1 302 302 302 91.39 100429 302 0.30 100.00 Ecoli_55989_817258_917686 Sflexneri_2a_2457T_927330_927631 49402 62896 1074 14569 13495 13496 98.36 100429 34967 13.44 38.60 Ecoli_55989_817258_917686 Sflexneri_2a_2457T_745050_780016 63802 75035 14761 25994 11234 11234 98.28 100429 34967 11.19 32.13 Ecoli_55989_817258_917686 Sflexneri_2a_2457T_745050_780016 75234 84210 25991 34967 8977 8977 98.28 100429 34967 8.94 25.67 Ecoli_55989_817258_917686 Sflexneri_2a_2457T_745050_780016 84222 88564 1 4342 4343 4342 98.00 100429 40532 4.32 10.71 Ecoli_55989_817258_917686 Sflexneri_2a_2457T_781466_821997 88573 100429 4495 16350 11857 11856 98.98 100429 40532 11.81 29.25 Ecoli_55989_817258_917686 Sflexneri_2a_2457T_781466_821997 1 6625 16493 23117 6625 6625 98.28 68092 40532 9.73 16.35 Ecoli_55989_919103_987194 Sflexneri_2a_2457T_781466_821997 6627 23955 23210 40530 17329 17321 98.86 68092 40532 25.45 42.73 Ecoli_55989_919103_987194 Sflexneri_2a_2457T_781466_821997 23957 46735 2 22775 22779 22774 98.57 68092 35749 33.45 63.71 Ecoli_55989_919103_987194 Sflexneri_2a_2457T_823262_859010 46788 57207 25330 35749 10420 10420 98.38 68092 35749 15.30 29.15 Ecoli_55989_919103_987194 Sflexneri_2a_2457T_823262_859010 57599 58326 346 1073 728 728 98.49 68092 1073 1.07 67.85 Ecoli_55989_919103_987194 Sflexneri_2a_2457T_860355_861427 58332 68082 1 9749 9751 9749 98.33 68092 9819 14.32 99.29 Ecoli_55989_919103_987194 Sflexneri_2a_2457T_862209_872027 13 9503 13 9464 9491 9452 98.67 9503 21237 99.87 44.51 Ecoli_55989_987330_996832 Sflexneri_2a_2457T_872163_893399