##gff-version 3
#!gff-spec-version 1.20
#!processor NCBI annotwriter
##sequence-region NC_006570.2 1 1892775
##species http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=177416
NC_006570.2	RefSeq	region	1	1892775	.	+	.	ID=id0;Dbxref=taxon:177416;Is_circular=true;gbkey=Src;genome=chromosome;mol_type=genomic DNA;strain=SCHU S4;sub-species=tularensis
NC_006570.2	RefSeq	gene	1	1521	.	+	.	ID=gene0;Name=dnaA;Dbxref=GeneID:3191523;gbkey=Gene;gene=dnaA;locus_tag=FTT_0001
NC_006570.2	RefSeq	CDS	1	1521	.	+	0	ID=cds0;Name=YP_169084.1;Parent=gene0;Note=binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication%3B can also affect transcription of multiple genes including itself.;Dbxref=GOA:Q5NIQ8,InterPro:IPR018312,UniProtKB%2FSwiss-Prot:Q5NIQ8,Genbank:YP_169084.1,GeneID:3191523;gbkey=CDS;product=chromosome replication initiator DnaA;protein_id=YP_169084.1;transl_table=11
NC_006570.2	RefSeq	gene	1558	2661	.	+	.	ID=gene1;Name=dnaN;Dbxref=GeneID:3191533;gbkey=Gene;gene=dnaN;locus_tag=FTT_0002
NC_006570.2	RefSeq	CDS	1558	2661	.	+	0	ID=cds1;Name=YP_169085.1;Parent=gene1;Note=Similar to DP3B_ECOLI %28P00583%29 DNA polymerase III%2C beta chain from E. coli %28366 aa%29. FASTA opt: 826 Z-score: 955.1 E%28%29: 2.6e-45 Smith-Waterman score: 826%3B 35.230 identity in 369 aa overlap;Dbxref=GOA:Q5NIQ7,InterPro:IPR001001,UniProtKB%2FTrEMBL:Q5NIQ7,Genbank:YP_169085.1,GeneID:3191533;gbkey=CDS;product=DNA polymerase III subunit beta;protein_id=YP_169085.1;transl_table=11
NC_006570.2	RefSeq	gene	2692	3096	.	-	.	ID=gene2;Name=FTT_0003c;Dbxref=GeneID:3192133;gbkey=Gene;locus_tag=FTT_0003c;pseudo=true
NC_006570.2	RefSeq	repeat_region	3105	3116	.	-	.	ID=id1;Note=ISFtu1 12bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	gene	3204	3988	.	-	.	ID=gene3;Name=isftu1;Dbxref=GeneID:3192121;gbkey=Gene;gene=isftu1;locus_tag=FTT_0004c
NC_006570.2	RefSeq	CDS	3662	3988	.	-	0	ID=cds2;Name=YP_169086.1;Parent=gene3;Note=ISFtu1. Transposase%2C member of the IS630 Tc-1 mariner family. Identical to Q93EJ6  transposase from Francisella tularensis %28118 aa%29 from aa 144-261. Identical to Q93EJ7  transposase from Francisella tularensis %28126 aa%29 from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF%27s. ORF1 %28identical to Q93EJ7%29 contains a programmed ribosomal frameshifting motif%2C 5%27-AAAAAAAG-3%27 at aa position 109 which permits frameshifting to ORF2 %28identical to Q93EJ6%29 to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family%2C and also mariner elements%2C show that this transposase shares strongly conserved residues%2C including a fully conserved dipeptide%2CAsp-Glu %28DE%29%2C and a block consisting of a fully conserved Asp and highly conserved Glu%2C separated by 34 or 35 residues %28D35E%29. The conserved dipeptide is only present if ribosomal frameshifting occurs.;Dbxref=UniProtKB%2FTrEMBL:Q5NIH2,Genbank:YP_169086.1,GeneID:3192121;gbkey=CDS;product=transposase;protein_id=YP_169086.1;transl_table=11
NC_006570.2	RefSeq	CDS	3204	3662	.	-	0	ID=cds2;Name=YP_169086.1;Parent=gene3;Note=ISFtu1. Transposase%2C member of the IS630 Tc-1 mariner family. Identical to Q93EJ6  transposase from Francisella tularensis %28118 aa%29 from aa 144-261. Identical to Q93EJ7  transposase from Francisella tularensis %28126 aa%29 from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF%27s. ORF1 %28identical to Q93EJ7%29 contains a programmed ribosomal frameshifting motif%2C 5%27-AAAAAAAG-3%27 at aa position 109 which permits frameshifting to ORF2 %28identical to Q93EJ6%29 to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family%2C and also mariner elements%2C show that this transposase shares strongly conserved residues%2C including a fully conserved dipeptide%2CAsp-Glu %28DE%29%2C and a block consisting of a fully conserved Asp and highly conserved Glu%2C separated by 34 or 35 residues %28D35E%29. The conserved dipeptide is only present if ribosomal frameshifting occurs.;Dbxref=UniProtKB%2FTrEMBL:Q5NIH2,Genbank:YP_169086.1,GeneID:3192121;gbkey=CDS;product=transposase;protein_id=YP_169086.1;transl_table=11
NC_006570.2	RefSeq	repeat_region	4009	4024	.	-	.	ID=id2;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	4025	4040	.	-	.	ID=id3;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	4041	4056	.	-	.	ID=id4;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	4057	4072	.	-	.	ID=id5;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	4073	4084	.	-	.	ID=id6;Note=ISFtu1 12bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	gene	4086	4625	.	+	.	ID=gene4;Name=gabD1;Dbxref=GeneID:3191547;gbkey=Gene;gene=gabD1;locus_tag=FTT_0005;pseudo=true
NC_006570.2	RefSeq	gene	4661	5869	.	+	.	ID=gene5;Name=FTT_0006;Dbxref=GeneID:3192082;gbkey=Gene;locus_tag=FTT_0006
NC_006570.2	RefSeq	CDS	4661	5869	.	+	0	ID=cds3;Name=YP_169087.1;Parent=gene5;Note=Similar to Q9ZE69 Proline%2Fbetaine transporter %28PROP1%29 from Rickettsia prowazekii %28418 aa%29. FASTA: opt: 605 Z-score: 665.8 E%28%29: 3.4e-29 Smith-Waterman score: 605%3B 28.293 identity in 410 aa overlap ORF ftt0006;Dbxref=InterPro:IPR011701,UniProtKB%2FTrEMBL:Q5NIQ5,Genbank:YP_169087.1,GeneID:3192082;gbkey=CDS;product=MFS superfamily proline%2F betaine transporter;protein_id=YP_169087.1;transl_table=11
NC_006570.2	RefSeq	gene	6044	7822	.	+	.	ID=gene6;Name=aspS;Dbxref=GeneID:3192542;gbkey=Gene;gene=aspS;locus_tag=FTT_0007
NC_006570.2	RefSeq	CDS	6044	7822	.	+	0	ID=cds4;Name=YP_169088.1;Parent=gene6;Note=catalyzes a two-step reaction%2C first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B contains discriminating and non-discriminating subtypes;Dbxref=GOA:Q5NIQ4,InterPro:IPR018153,UniProtKB%2FSwiss-Prot:Q5NIQ4,Genbank:YP_169088.1,GeneID:3192542;gbkey=CDS;product=aspartyl-tRNA synthetase;protein_id=YP_169088.1;transl_table=11
NC_006570.2	RefSeq	gene	7959	8252	.	+	.	ID=gene7;Name=FTT_0008;Dbxref=GeneID:3190762;gbkey=Gene;locus_tag=FTT_0008;pseudo=true
NC_006570.2	RefSeq	repeat_region	8254	8265	.	+	.	ID=id7;Note=ISFtu1 12bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	8266	8281	.	+	.	ID=id8;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	8282	8297	.	+	.	ID=id9;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	8298	8313	.	+	.	ID=id10;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	8314	8329	.	+	.	ID=id11;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;gbkey=repeat_region
NC_006570.2	RefSeq	gene	8350	8822	.	+	.	ID=gene8;Name=isftu1;Dbxref=GeneID:3191494;gbkey=Gene;gene=isftu1;locus_tag=FTT_0009;pseudo=true
NC_006570.2	RefSeq	repeat_region	8910	8921	.	+	.	ID=id12;Note=ISFtu1 12bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	gene	8924	9430	.	+	.	ID=gene9;Name=FTT_0010;Dbxref=GeneID:3190759;gbkey=Gene;locus_tag=FTT_0010;pseudo=true
NC_006570.2	RefSeq	gene	9400	10269	.	+	.	ID=gene10;Name=FTT_0011;Dbxref=GeneID:3190752;gbkey=Gene;locus_tag=FTT_0011;pseudo=true
NC_006570.2	RefSeq	gene	10557	11413	.	+	.	ID=gene11;Name=FTT_0012;Dbxref=GeneID:3192127;gbkey=Gene;locus_tag=FTT_0012;pseudo=true
NC_006570.2	RefSeq	gene	11434	12216	.	-	.	ID=gene12;Name=FTT_0013c;Dbxref=GeneID:3192126;gbkey=Gene;locus_tag=FTT_0013c
NC_006570.2	RefSeq	CDS	11434	12216	.	-	0	ID=cds5;Name=YP_169089.1;Parent=gene12;Note=ORF ftt0013c;Dbxref=UniProtKB%2FTrEMBL:Q5NIQ3,Genbank:YP_169089.1,GeneID:3192126;gbkey=CDS;product=lipoprotein;protein_id=YP_169089.1;transl_table=11
NC_006570.2	RefSeq	gene	12456	12854	.	-	.	ID=gene13;Name=FTT_0014c;Dbxref=GeneID:3192132;gbkey=Gene;locus_tag=FTT_0014c
NC_006570.2	RefSeq	CDS	12456	12854	.	-	0	ID=cds6;Name=YP_169090.1;Parent=gene13;Note=ORF ftt0014c;Dbxref=UniProtKB%2FTrEMBL:Q5NIQ2,Genbank:YP_169090.1,GeneID:3192132;gbkey=CDS;product=hypothetical protein;protein_id=YP_169090.1;transl_table=11
NC_006570.2	RefSeq	gene	13182	14480	.	+	.	ID=gene14;Name=purB;Dbxref=GeneID:3191235;gbkey=Gene;gene=purB;locus_tag=FTT_0015
NC_006570.2	RefSeq	CDS	13182	14480	.	+	0	ID=cds7;Name=YP_169091.1;Parent=gene14;Note=Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide;Dbxref=GOA:Q5NIQ1,InterPro:IPR004769,UniProtKB%2FTrEMBL:Q5NIQ1,Genbank:YP_169091.1,GeneID:3191235;gbkey=CDS;product=adenylosuccinate lyase;protein_id=YP_169091.1;transl_table=11
NC_006570.2	RefSeq	gene	14514	15092	.	+	.	ID=gene15;Name=FTT_0016;Dbxref=GeneID:3192139;gbkey=Gene;locus_tag=FTT_0016
NC_006570.2	RefSeq	CDS	14514	15092	.	+	0	ID=cds8;Name=YP_169092.1;Parent=gene15;Note=ORF ftt0016;Dbxref=UniProtKB%2FTrEMBL:Q5NIQ0,Genbank:YP_169092.1,GeneID:3192139;gbkey=CDS;product=hypothetical protein;protein_id=YP_169092.1;transl_table=11
NC_006570.2	RefSeq	gene	15179	16720	.	+	.	ID=gene16;Name=FTT_0017;Dbxref=GeneID:3192135;gbkey=Gene;locus_tag=FTT_0017
NC_006570.2	RefSeq	CDS	15179	16720	.	+	0	ID=cds9;Name=YP_169093.1;Parent=gene16;Note=Similar to Q8PAK3 Toxin secretion ABC transporter ATP-binding protein from Xanthomonas axonopodis %28563 aa%29. FASTA: opt: 454 Z-score: 516.4 E%28%29: 7.1e-21 Smith-Waterman score: 454%3B 24.395identity in 496 aa overlap ORF ftt0017;Dbxref=GOA:Q5NIP9,InterPro:IPR017940,UniProtKB%2FTrEMBL:Q5NIP9,Genbank:YP_169093.1,GeneID:3192135;gbkey=CDS;product=hypothetical protein;protein_id=YP_169093.1;transl_table=11
NC_006570.2	RefSeq	gene	16728	17801	.	+	.	ID=gene17;Name=FTT_0018;Dbxref=GeneID:3192140;gbkey=Gene;locus_tag=FTT_0018
NC_006570.2	RefSeq	CDS	16728	17801	.	+	0	ID=cds10;Name=YP_169094.1;Parent=gene17;Note=Similar to Q8PMA5 RND efflux membrane fusion protein from Xanthomonas axonopodis %28354 aa%29. FASTA: opt: 851 Z-score: 971.0 E%28%29: 3.4e-46 Smith-Waterman score: 851%3B 37.846 identity in 325 aa overlap ORF ftt0018;Dbxref=UniProtKB%2FTrEMBL:Q5NIP8,Genbank:YP_169094.1,GeneID:3192140;gbkey=CDS;product=secretion protein;protein_id=YP_169094.1;transl_table=11
NC_006570.2	RefSeq	gene	17884	18165	.	+	.	ID=gene18;Name=gatC;Dbxref=GeneID:3191550;gbkey=Gene;gene=gatC;locus_tag=FTT_0019
NC_006570.2	RefSeq	CDS	17884	18165	.	+	0	ID=cds11;Name=YP_169095.1;Parent=gene18;Note=Similar to Q82T57 Glu-tRNAGln amidotransferase C subunit from Nitrosomonas europaea %2895 aa%29. FASTA:i opt: 188 Z-score: 259.9 E%28%29: 1.4e-06 Smith-Waterman score: 188%3B 31.818 identity in 88 aa overlap;Dbxref=GOA:Q5NIP7,InterPro:IPR003837,UniProtKB%2FTrEMBL:Q5NIP7,Genbank:YP_169095.1,GeneID:3191550;gbkey=CDS;product=Glu-tRNAGln amidotransferase C subunit;protein_id=YP_169095.1;transl_table=11
NC_006570.2	RefSeq	gene	18174	19619	.	+	.	ID=gene19;Name=gatA;Dbxref=GeneID:3191915;gbkey=Gene;gene=gatA;locus_tag=FTT_0020
NC_006570.2	RefSeq	CDS	18174	19619	.	+	0	ID=cds12;Name=YP_169096.1;Parent=gene19;Note=allows the formation of correctly charged Asn-tRNA%28Asn%29 or Gln-tRNA%28Gln%29 through the transamidation of misacylated Asp-tRNA%28Asn%29 or Glu-tRNA%28Gln%29 in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases%3B reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA%28Asn%29 or phospho-Glu-tRNA;Dbxref=GOA:Q5NIP6,InterPro:IPR004412,UniProtKB%2FSwiss-Prot:Q5NIP6,Genbank:YP_169096.1,GeneID:3191915;gbkey=CDS;product=aspartyl%2Fglutamyl-tRNA amidotransferase subunit A;protein_id=YP_169096.1;transl_table=11
NC_006570.2	RefSeq	gene	19622	21043	.	+	.	ID=gene20;Name=gatB;Dbxref=GeneID:3191603;gbkey=Gene;gene=gatB;locus_tag=FTT_0021
NC_006570.2	RefSeq	CDS	19622	21043	.	+	0	ID=cds13;Name=YP_169097.1;Parent=gene20;Note=allows the formation of correctly charged Asn-tRNA%28Asn%29 or Gln-tRNA%28Gln%29 through the transamidation of misacylated Asp-tRNA%28Asn%29 or Glu-tRNA%28Gln%29 in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases%3B reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA%28Asn%29 or phospho-Glu-tRNA;Dbxref=GOA:Q5NIP5,InterPro:IPR018027,UniProtKB%2FSwiss-Prot:Q5NIP5,Genbank:YP_169097.1,GeneID:3191603;gbkey=CDS;product=aspartyl%2Fglutamyl-tRNA amidotransferase subunit B;protein_id=YP_169097.1;transl_table=11
NC_006570.2	RefSeq	gene	21058	21465	.	+	.	ID=gene21;Name=FTT_0022;Dbxref=GeneID:3192103;gbkey=Gene;locus_tag=FTT_0022
NC_006570.2	RefSeq	CDS	21058	21465	.	+	0	ID=cds14;Name=YP_169098.1;Parent=gene21;Note=ORF ftt0022;Dbxref=UniProtKB%2FTrEMBL:Q5NIP4,Genbank:YP_169098.1,GeneID:3192103;gbkey=CDS;product=hypothetical protein;protein_id=YP_169098.1;transl_table=11
NC_006570.2	RefSeq	gene	21481	22362	.	-	.	ID=gene22;Name=FTT_0023c;Dbxref=GeneID:3192099;gbkey=Gene;locus_tag=FTT_0023c
NC_006570.2	RefSeq	CDS	21481	22362	.	-	0	ID=cds15;Name=YP_169099.1;Parent=gene22;Note=Similar to Q9F7Y6 Glycerophospholipid-cholesterol acyltransferase from Aeromonas salmonicida %28336 aa%29. FASTA: opt: 367 Z-score: 437.4 E%28%29: 1.8e-16 Smith-Waterman score: 407%3B 30.183 identity in 328 aa overlap ORF ftt0023c;Dbxref=GOA:Q5NIP3,InterPro:IPR001087,UniProtKB%2FTrEMBL:Q5NIP3,Genbank:YP_169099.1,GeneID:3192099;gbkey=CDS;product=lipase%2Facyltransferase;protein_id=YP_169099.1;transl_table=11
NC_006570.2	RefSeq	gene	22630	22974	.	-	.	ID=gene23;Name=FTT_0024c;Dbxref=GeneID:3192097;gbkey=Gene;locus_tag=FTT_0024c
NC_006570.2	RefSeq	CDS	22630	22974	.	-	0	ID=cds16;Name=YP_169100.1;Parent=gene23;Note=ORF ftt0024c;Dbxref=UniProtKB%2FTrEMBL:Q5NIP2,Genbank:YP_169100.1,GeneID:3192097;gbkey=CDS;product=hypothetical protein;protein_id=YP_169100.1;transl_table=11
NC_006570.2	RefSeq	gene	23022	24551	.	-	.	ID=gene24;Name=FTT_0025c;Dbxref=GeneID:3192092;gbkey=Gene;locus_tag=FTT_0025c
NC_006570.2	RefSeq	CDS	23022	24551	.	-	0	ID=cds17;Name=YP_169101.1;Parent=gene24;Note=ORF ftt0025c;Dbxref=UniProtKB%2FTrEMBL:Q5NIP1,Genbank:YP_169101.1,GeneID:3192092;gbkey=CDS;product=hypothetical protein;protein_id=YP_169101.1;transl_table=11
NC_006570.2	RefSeq	gene	24636	25826	.	-	.	ID=gene25;Name=FTT_0026c;Dbxref=GeneID:3192094;gbkey=Gene;locus_tag=FTT_0026c
NC_006570.2	RefSeq	CDS	24636	25826	.	-	0	ID=cds18;Name=YP_169102.1;Parent=gene25;Note=Similar to Q9HWP5 Probable MFS transporter from Pseudomonas aeruginosa %28402 aa%29. FASTA: opt: 568 Z-score: 586.0 E%28%29: 9.5e-25 Smith-Waterman score: 568%3B 26.425 identity in 386 aa overlap ORF ftt0026c;Dbxref=GOA:Q5NIP0,InterPro:IPR011701,UniProtKB%2FTrEMBL:Q5NIP0,Genbank:YP_169102.1,GeneID:3192094;gbkey=CDS;product=hypothetical protein;protein_id=YP_169102.1;transl_table=11
NC_006570.2	RefSeq	gene	25842	27095	.	-	.	ID=gene26;Name=lysA1;Dbxref=GeneID:3192305;gbkey=Gene;gene=lysA1;locus_tag=FTT_0027c
NC_006570.2	RefSeq	CDS	25842	27095	.	-	0	ID=cds19;Name=YP_169103.1;Parent=gene26;Note=Similar to DCDA_BACSU %28P23630%29 Diaminopimelate decarboxylase from Bacillus subtilis %28441 aa%29. FASTA: opt: 437 Z-score: 538.0 E%28%29: 4.5e-22 Smith-Waterman score: 437%3B 27.295 identity in 414 aa overlap;Dbxref=GOA:Q5NIN9,InterPro:IPR000183,UniProtKB%2FTrEMBL:Q5NIN9,Genbank:YP_169103.1,GeneID:3192305;gbkey=CDS;product=diaminopimelate decarboxylase;protein_id=YP_169103.1;transl_table=11
NC_006570.2	RefSeq	gene	27088	28350	.	-	.	ID=gene27;Name=FTT_0028c;Dbxref=GeneID:3192141;gbkey=Gene;locus_tag=FTT_0028c
NC_006570.2	RefSeq	CDS	27088	28350	.	-	0	ID=cds20;Name=YP_169104.1;Parent=gene27;Note=Similar to YCEE_ECOLI %28P25744%29 Hypothetical transport protein yce from E. coli %28408 aa%29. FASTA: opt: 364 Z-score: 408.7 E%28%29: 7.1e-15 Smith-Waterman score: 450%3B 26.582 identity in 395 aa overlap ORF ftt0028c;Dbxref=InterPro:IPR011701,UniProtKB%2FTrEMBL:Q5NIN8,Genbank:YP_169104.1,GeneID:3192141;gbkey=CDS;product=hypothetical protein;protein_id=YP_169104.1;transl_table=11
NC_006570.2	RefSeq	gene	28357	30276	.	-	.	ID=gene28;Name=FTT_0029c;Dbxref=GeneID:3192145;gbkey=Gene;locus_tag=FTT_0029c
NC_006570.2	RefSeq	CDS	28357	30276	.	-	0	ID=cds21;Name=YP_169105.1;Parent=gene28;Note=Similar to AAO89973 %28Q83EA5%29 FrgA protein from Coxiella burnetii %28528 aa%29. FASTA: opt: 1047 Z-score: 1237.4 E%28%29: 4.9e-61 Smith-Waterman score: 1053%3B 34.051 identity in 511 aa overlap ORF ftt0029c;Dbxref=GOA:Q5NIN7,InterPro:IPR007310,UniProtKB%2FTrEMBL:Q5NIN7,Genbank:YP_169105.1,GeneID:3192145;gbkey=CDS;product=hypothetical protein;protein_id=YP_169105.1;transl_table=11
NC_006570.2	RefSeq	gene	30529	30951	.	-	.	ID=gene29;Name=fur;Dbxref=GeneID:3191536;gbkey=Gene;gene=fur;locus_tag=FTT_0030c
NC_006570.2	RefSeq	CDS	30529	30951	.	-	0	ID=cds22;Name=YP_169106.1;Parent=gene29;Note=Similar to FUR_ECOLI %28P06975%29 Ferric uptake regulation protein from E. coli %28148 aa%29. FASTA: opt: 396 Z-score: 515.7 E%28%29: 7.8e-21 Smith-Waterman score: 396%3B 40.714 identity in 140 aa overlap;Dbxref=GOA:Q5NIN6,InterPro:IPR002481,UniProtKB%2FTrEMBL:Q5NIN6,Genbank:YP_169106.1,GeneID:3191536;gbkey=CDS;product=ferric uptake regulation protein;protein_id=YP_169106.1;transl_table=11
NC_006570.2	RefSeq	gene	31160	31558	.	+	.	ID=gene30;Name=nuoA;Dbxref=GeneID:3191755;gbkey=Gene;gene=nuoA;locus_tag=FTT_0031
NC_006570.2	RefSeq	CDS	31160	31558	.	+	0	ID=cds23;Name=YP_169107.1;Parent=gene30;Note=Similar to Q9A6X0 NADH dehydrogenase I%2C A subunit from Caulobacter crescentus %28125 aa%29. FASTA: opt: 398 Z-score: 508.1 E%28%29: 2.1e-20 Smith-Waterman score: 398%3B 46.565 identity in 131 aa overlap;Dbxref=GOA:Q5NIN5,InterPro:IPR000440,UniProtKB%2FTrEMBL:Q5NIN5,Genbank:YP_169107.1,GeneID:3191755;gbkey=CDS;product=NADH dehydrogenase I subunit A;protein_id=YP_169107.1;transl_table=11
NC_006570.2	RefSeq	gene	31549	32025	.	+	.	ID=gene31;Name=nuoB;Dbxref=GeneID:3191756;gbkey=Gene;gene=nuoB;locus_tag=FTT_0032
NC_006570.2	RefSeq	CDS	31549	32025	.	+	0	ID=cds24;Name=YP_169108.1;Parent=gene31;Note=The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen;Dbxref=GOA:Q5NIN4,InterPro:IPR014406,UniProtKB%2FTrEMBL:Q5NIN4,Genbank:YP_169108.1,GeneID:3191756;gbkey=CDS;product=NADH dehydrogenase subunit B;protein_id=YP_169108.1;transl_table=11
NC_006570.2	RefSeq	gene	32022	32672	.	+	.	ID=gene32;Name=nuoC;Dbxref=GeneID:3192334;gbkey=Gene;gene=nuoC;locus_tag=FTT_0033
NC_006570.2	RefSeq	CDS	32022	32672	.	+	0	ID=cds25;Name=YP_169109.1;Parent=gene32;Note=Similar to NUOC_NEIMB %28Q9K1C1%29 NADH-quinone oxidoreductase chain from Neisseria meningitidis %28197 aa%29. FASTA: opt: 516 Z-score: 659.3 E%28%29: 7.8e-29 Smith-Waterman score: 568%3B 44.286identity in 210 aa overlap;Dbxref=GOA:Q5NIN3,InterPro:IPR010218,UniProtKB%2FSwiss-Prot:Q5NIN3,Genbank:YP_169109.1,GeneID:3192334;gbkey=CDS;product=NADH dehydrogenase I;protein_id=YP_169109.1;transl_table=11
NC_006570.2	RefSeq	gene	32694	33947	.	+	.	ID=gene33;Name=nuoD;Dbxref=GeneID:3191807;gbkey=Gene;gene=nuoD;locus_tag=FTT_0034
NC_006570.2	RefSeq	CDS	32694	33947	.	+	0	ID=cds26;Name=YP_169110.1;Parent=gene33;Note=Catalyzes the transfer of electrons from NADH to quinone;Dbxref=GOA:Q5NIN2,InterPro:IPR014029,UniProtKB%2FSwiss-Prot:Q5NIN2,Genbank:YP_169110.1,GeneID:3191807;gbkey=CDS;product=NADH dehydrogenase subunit D;protein_id=YP_169110.1;transl_table=11
NC_006570.2	RefSeq	gene	33957	34445	.	+	.	ID=gene34;Name=nuoE;Dbxref=GeneID:3191813;gbkey=Gene;gene=nuoE;locus_tag=FTT_0035
NC_006570.2	RefSeq	CDS	33957	34445	.	+	0	ID=cds27;Name=YP_169111.1;Parent=gene34;Note=Similar to Q83BQ9 NADH dehydrogenase I%2C E subunit from Xanthomonas campestris %28174 aa%29. FASTA: opt: 528 Z-score: 689.7 E%28%29: 1.6e-30 Smith-Waterman score: 528%3B 52.318 identity in 151 aa overlap;Dbxref=GOA:Q5NIN1,InterPro:IPR012335,UniProtKB%2FTrEMBL:Q5NIN1,Genbank:YP_169111.1,GeneID:3191813;gbkey=CDS;product=NADH dehydrogenase I subunit E;protein_id=YP_169111.1;transl_table=11
NC_006570.2	RefSeq	gene	34452	35726	.	+	.	ID=gene35;Name=nuoF;Dbxref=GeneID:3191815;gbkey=Gene;gene=nuoF;locus_tag=FTT_0036
NC_006570.2	RefSeq	CDS	34452	35726	.	+	0	ID=cds28;Name=YP_169112.1;Parent=gene35;Note=Similar to Q83BR0 NADH dehydrogenase I%2C F subunit from Coxiella burnetti %28422 aa%29. FASTA: opt: 1851 Z-score: 2306.0 E%28%29: 1.5e-120 Smith-Waterman score: 1851%3B 61.848 identity in 422 aa overlap;Dbxref=GOA:Q5NIN0,InterPro:IPR011538,UniProtKB%2FTrEMBL:Q5NIN0,Genbank:YP_169112.1,GeneID:3191815;gbkey=CDS;product=NADH dehydrogenase I subunit F;protein_id=YP_169112.1;transl_table=11
NC_006570.2	RefSeq	gene	35744	38110	.	+	.	ID=gene36;Name=nuoG;Dbxref=GeneID:3191823;gbkey=Gene;gene=nuoG;locus_tag=FTT_0037
NC_006570.2	RefSeq	CDS	35744	38110	.	+	0	ID=cds29;Name=YP_169113.1;Parent=gene36;Note=Catalyzes the transfer of electrons from NADH to ubiquinone;Dbxref=GOA:Q5NIM9,InterPro:IPR010228,UniProtKB%2FTrEMBL:Q5NIM9,Genbank:YP_169113.1,GeneID:3191823;gbkey=CDS;product=NADH dehydrogenase subunit G;protein_id=YP_169113.1;transl_table=11
NC_006570.2	RefSeq	gene	38112	39122	.	+	.	ID=gene37;Name=nuoH;Dbxref=GeneID:3191826;gbkey=Gene;gene=nuoH;locus_tag=FTT_0038
NC_006570.2	RefSeq	CDS	38112	39122	.	+	0	ID=cds30;Name=YP_169114.1;Parent=gene37;Note=Similar to Q83BR2 NADH dehydrogenase I%2C H subunit from Coxiella burnetii %28340 aa%29. FASTA: opt: 1510 Z-score: 1695.3 E%28%29: 1.5e-86 Smith-Waterman score: 1510%3B 60.843 identity in 332 aa overlap;Dbxref=GOA:Q5NIM8,InterPro:IPR018086,UniProtKB%2FSwiss-Prot:Q5NIM8,Genbank:YP_169114.1,GeneID:3191826;gbkey=CDS;product=NADH dehydrogenase I subunit H;protein_id=YP_169114.1;transl_table=11
NC_006570.2	RefSeq	gene	39136	39624	.	+	.	ID=gene38;Name=nuoI;Dbxref=GeneID:3191832;gbkey=Gene;gene=nuoI;locus_tag=FTT_0039
NC_006570.2	RefSeq	CDS	39136	39624	.	+	0	ID=cds31;Name=YP_169115.1;Parent=gene38;Note=Catalyzes the transfer of electrons from NADH to quinone;Dbxref=GOA:Q5NIM7,InterPro:IPR017900,UniProtKB%2FSwiss-Prot:Q5NIM7,Genbank:YP_169115.1,GeneID:3191832;gbkey=CDS;product=NADH dehydrogenase subunit I;protein_id=YP_169115.1;transl_table=11
NC_006570.2	RefSeq	gene	39629	40234	.	+	.	ID=gene39;Name=nuoJ;Dbxref=GeneID:3191843;gbkey=Gene;gene=nuoJ;locus_tag=FTT_0040
NC_006570.2	RefSeq	CDS	39629	40234	.	+	0	ID=cds32;Name=YP_169116.1;Parent=gene39;Note=Similar to Q9K1B2 NADH dehydrogenase I%2C J subunit from Neisseria meningitidis %28223 aa%29. FASTA: opt: 387 Z-score: 452.6 E%28%29: 2.6e-17 Smith-Waterman score: 387%3B 38.191 identity in 199 aa overlap;Dbxref=GOA:Q5NIM6,InterPro:IPR001457,UniProtKB%2FTrEMBL:Q5NIM6,Genbank:YP_169116.1,GeneID:3191843;gbkey=CDS;product=NADH dehydrogenase I subunit J;protein_id=YP_169116.1;transl_table=11
NC_006570.2	RefSeq	gene	40212	40544	.	+	.	ID=gene40;Name=nuoK;Dbxref=GeneID:3191853;gbkey=Gene;gene=nuoK;locus_tag=FTT_0041
NC_006570.2	RefSeq	CDS	40212	40544	.	+	0	ID=cds33;Name=YP_169117.1;Parent=gene40;Note=Similar to Q9A6Y6 NADH dehydrogenase I%2C K subunit from Caulobacter crescentus %28101 aa%29. FASTA: opt: 300 Z-score: 405.7 E%28%29: 1e-14 Smith-Waterman score: 300%3B 43.000 identity in 100 aa overlap;Dbxref=GOA:Q5NIM5,InterPro:IPR001133,UniProtKB%2FTrEMBL:Q5NIM5,Genbank:YP_169117.1,GeneID:3191853;gbkey=CDS;product=NADH dehydrogenase I subunit K;protein_id=YP_169117.1;transl_table=11
NC_006570.2	RefSeq	gene	40554	42563	.	+	.	ID=gene41;Name=nuoL;Dbxref=GeneID:3192436;gbkey=Gene;gene=nuoL;locus_tag=FTT_0042
NC_006570.2	RefSeq	CDS	40554	42563	.	+	0	ID=cds34;Name=YP_169118.1;Parent=gene41;Note=Similar to Q83BR6 NADH dehydrogenase I%2C L subunit from Coxiella burnetii %28653 aa%29. FASTA: opt: 1934 Z-score: 2065.6 E%28%29: 3.6e-107 Smith-Waterman score: 2090%3B 50.760 identity in 658 aa overlap;Dbxref=GOA:Q5NIM4,InterPro:IPR018393,UniProtKB%2FTrEMBL:Q5NIM4,Genbank:YP_169118.1,GeneID:3192436;gbkey=CDS;product=NADH dehydrogenase I subunit L;protein_id=YP_169118.1;transl_table=11
NC_006570.2	RefSeq	gene	42589	44178	.	+	.	ID=gene42;Name=nuoM;Dbxref=GeneID:3191014;gbkey=Gene;gene=nuoM;locus_tag=FTT_0043
NC_006570.2	RefSeq	CDS	42589	44178	.	+	0	ID=cds35;Name=YP_169119.1;Parent=gene42;Note=Similar to Q83BR7 NADH dehydrogenase I%2C M subunit from Coxiella burnetii %28506 aa%29. FASTA: opt: 1099 Z-score: 1147.9 E%28%29: 4.8e-56 Smith-Waterman score: 1659%3B 47.228 identity in 523 aa overlap;Dbxref=GOA:Q5NIM3,InterPro:IPR010227,UniProtKB%2FTrEMBL:Q5NIM3,Genbank:YP_169119.1,GeneID:3191014;gbkey=CDS;product=NADH dehydrogenase I subunit M;protein_id=YP_169119.1;transl_table=11
NC_006570.2	RefSeq	gene	44188	45645	.	+	.	ID=gene43;Name=nuoN;Dbxref=GeneID:3191022;gbkey=Gene;gene=nuoN;locus_tag=FTT_0044
NC_006570.2	RefSeq	CDS	44188	45645	.	+	0	ID=cds36;Name=YP_169120.1;Parent=gene43;Note=Similar to Q83BR8 NADH dehydrogenase I%2C N subunit from Coxiella burnetii %28482 aa%29. FASTA: opt: 1231 Z-score: 1222.9 E%28%29: 3.2e-60 Smith-Waterman score: 1231%3B 39.914 identity in 466 aa overlap;Dbxref=GOA:Q5NIM2,InterPro:IPR010096,UniProtKB%2FTrEMBL:Q5NIM2,Genbank:YP_169120.1,GeneID:3191022;gbkey=CDS;product=NADH dehydrogenase I subunit N;protein_id=YP_169120.1;transl_table=11
NC_006570.2	RefSeq	gene	45721	45915	.	+	.	ID=gene44;Name=FTT_0045;Dbxref=GeneID:3192148;gbkey=Gene;locus_tag=FTT_0045
NC_006570.2	RefSeq	CDS	45721	45915	.	+	0	ID=cds37;Name=YP_169121.1;Parent=gene44;Note=Similar to Q8DDC7 Conserved hypothetical protein from Vibrio vulnificus %2883 aa%29. FASTA: opt: 165 Z-score: 224.7 E%28%29: 0.00013 Smith-Waterman score: 165%3B 45.763 identity in 59 aa overlap ORF ftt0045;Dbxref=InterPro:IPR007475,UniProtKB%2FTrEMBL:Q5NIM1,Genbank:YP_169121.1,GeneID:3192148;gbkey=CDS;product=hypothetical protein;protein_id=YP_169121.1;transl_table=11
NC_006570.2	RefSeq	gene	45917	47405	.	+	.	ID=gene45;Name=FTT_0046;Dbxref=GeneID:3192147;gbkey=Gene;locus_tag=FTT_0046;pseudo=true
NC_006570.2	RefSeq	gene	47462	48496	.	+	.	ID=gene46;Name=hemE;Dbxref=GeneID:3192418;gbkey=Gene;gene=hemE;locus_tag=FTT_0047
NC_006570.2	RefSeq	CDS	47462	48496	.	+	0	ID=cds38;Name=YP_169122.1;Parent=gene46;Note=catalyzes the formation of coproporphyrinogen from uroporphyrinogen III;Dbxref=GOA:Q5NIM0,InterPro:IPR006361,UniProtKB%2FSwiss-Prot:Q5NIM0,Genbank:YP_169122.1,GeneID:3192418;gbkey=CDS;product=uroporphyrinogen decarboxylase;protein_id=YP_169122.1;transl_table=11
NC_006570.2	RefSeq	gene	48571	48644	.	+	.	ID=gene47;Name=tRNA-Met %28CAT%29;Dbxref=GeneID:3192264;description=tRNA-Met %28CAT%29;gbkey=Gene;gene=tRNA-Met %28CAT%29;locus_tag=FTT_t01
NC_006570.2	RefSeq	tRNA	48571	48644	.	+	.	ID=rna0;Dbxref=GeneID:3192264;codons=35;gbkey=tRNA;product=tRNA-Met
NC_006570.2	RefSeq	exon	48571	48644	.	+	.	ID=id13;Parent=rna0;Dbxref=GeneID:3192264;codons=35;gbkey=tRNA;product=tRNA-Met
NC_006570.2	RefSeq	gene	48716	49174	.	+	.	ID=gene48;Name=FTT_0048;Dbxref=GeneID:3192150;gbkey=Gene;locus_tag=FTT_0048
NC_006570.2	RefSeq	CDS	48716	49174	.	+	0	ID=cds39;Name=YP_169123.1;Parent=gene48;Note=Similar to Q88DV5 Conserved hypothetical protein from Pseudomonas putida %28169 aa%29. FASTA: opt: 402 Z-score: 490.7 E%28%29: 1.7e-19 Smith-Waterman score: 402%3B 43.243 identity in 148 aa overlap ORF ftt0048;Dbxref=InterPro:IPR003728,UniProtKB%2FSwiss-Prot:Q5NIL9,Genbank:YP_169123.1,GeneID:3192150;gbkey=CDS;product=hypothetical protein;protein_id=YP_169123.1;transl_table=11
NC_006570.2	RefSeq	gene	49192	50661	.	+	.	ID=gene49;Name=nusA;Dbxref=GeneID:3191035;gbkey=Gene;gene=nusA;locus_tag=FTT_0049
NC_006570.2	RefSeq	CDS	49192	50661	.	+	0	ID=cds40;Name=YP_169124.1;Parent=gene49;Note=modifies transcription through interactions with RNA polymerase affecting elongation%2C readthrough%2C termination%2C and antitermination;Dbxref=GOA:Q5NIL8,InterPro:IPR015946,UniProtKB%2FTrEMBL:Q5NIL8,Genbank:YP_169124.1,GeneID:3191035;gbkey=CDS;product=transcription elongation factor NusA;protein_id=YP_169124.1;transl_table=11
NC_006570.2	RefSeq	gene	50700	53240	.	+	.	ID=gene50;Name=infB;Dbxref=GeneID:3192398;gbkey=Gene;gene=infB;locus_tag=FTT_0050
NC_006570.2	RefSeq	CDS	50700	53240	.	+	0	ID=cds41;Name=YP_169125.1;Parent=gene50;Note=Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex;Dbxref=GOA:Q5NIL7,InterPro:IPR015760,UniProtKB%2FSwiss-Prot:Q5NIL7,Genbank:YP_169125.1,GeneID:3192398;gbkey=CDS;product=translation initiation factor IF-2;protein_id=YP_169125.1;transl_table=11
NC_006570.2	RefSeq	gene	53243	53674	.	+	.	ID=gene51;Name=rbfA;Dbxref=GeneID:3191646;gbkey=Gene;gene=rbfA;locus_tag=FTT_0051
NC_006570.2	RefSeq	CDS	53243	53674	.	+	0	ID=cds42;Name=YP_169126.1;Parent=gene51;Note=Similar to RBFA_ECOLI %28P09170%29 Ribosome-binding factor A from E. coli %28132 aa%29. FASTA: opt: 301 Z-score: 381.1 E%28%29: 2.5e-13 Smith-Waterman score: 301%3B 41.935 identity in 124 aa overlap;Dbxref=GOA:Q5NIL6,InterPro:IPR015946,UniProtKB%2FSwiss-Prot:Q5NIL6,Genbank:YP_169126.1,GeneID:3191646;gbkey=CDS;product=ribosome-binding factor A;protein_id=YP_169126.1;transl_table=11
NC_006570.2	RefSeq	gene	53682	54947	.	+	.	ID=gene52;Name=hisS;Dbxref=GeneID:3192430;gbkey=Gene;gene=hisS;locus_tag=FTT_0052
NC_006570.2	RefSeq	CDS	53682	54947	.	+	0	ID=cds43;Name=YP_169127.1;Parent=gene52;Note=catalyzes a two-step reaction%2C first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B class II aminoacyl-tRNA synthetase%3B forms homodimers%3B some organisms have a paralogous gene%2C hisZ%2C that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG;Dbxref=GOA:Q5NIL5,InterPro:IPR015807,UniProtKB%2FSwiss-Prot:Q5NIL5,Genbank:YP_169127.1,GeneID:3192430;gbkey=CDS;product=histidyl-tRNA synthetase;protein_id=YP_169127.1;transl_table=11
NC_006570.2	RefSeq	gene	54954	56252	.	+	.	ID=gene53;Name=FTT_0053;Dbxref=GeneID:3192152;gbkey=Gene;locus_tag=FTT_0053
NC_006570.2	RefSeq	CDS	54954	56252	.	+	0	ID=cds44;Name=YP_169128.1;Parent=gene53;Note=Similar to AAO90449 %28Q83D24%29 Major facilitator family transporter from Coxiella burnetii %28437 aa%29. FASTA: opt: 908 Z-score: 1023.7 E%28%29: 3.6e-49 Smith-Waterman score: 909%3B 36.603 identity in 418 aa overlap ORF ftt0053;Dbxref=InterPro:IPR011701,UniProtKB%2FTrEMBL:Q5NIL4,Genbank:YP_169128.1,GeneID:3192152;gbkey=CDS;product=major facilitator transporter;protein_id=YP_169128.1;transl_table=11
NC_006570.2	RefSeq	gene	56255	57322	.	+	.	ID=gene54;Name=FTT_0054;Dbxref=GeneID:3190705;gbkey=Gene;locus_tag=FTT_0054
NC_006570.2	RefSeq	CDS	56255	57322	.	+	0	ID=cds45;Name=YP_169129.1;Parent=gene54;Note=Similar to YHCM_ECOLI %28P46442%29 Hypothetical protein yhcM from E. coli %28375 aa%29. FASTA: opt: 872 Z-score: 1033.2 E%28%29: 1.2e-49 Smith-Waterman score: 898%3B 39.833 identity in 359 aa overlap ORF ftt0054;Dbxref=GOA:Q5NIL3,InterPro:IPR005654,UniProtKB%2FTrEMBL:Q5NIL3,Genbank:YP_169129.1,GeneID:3190705;gbkey=CDS;product=ATPase;protein_id=YP_169129.1;transl_table=11
NC_006570.2	RefSeq	gene	57315	58244	.	+	.	ID=gene55;Name=rluC;Dbxref=GeneID:3191616;gbkey=Gene;gene=rluC;locus_tag=FTT_0055
NC_006570.2	RefSeq	CDS	57315	58244	.	+	0	ID=cds46;Name=YP_169130.1;Parent=gene55;Note=Similar to RLUC_ECOLI %28P23851%29 Ribosomal large subunit pseudouridine synthase C from E. coli %28319 aa%29. FASTA: opt: 791 Z-score: 972.5 E%28%29: 2.8e-46 Smith-Waterman score: 791%3B 40.777 identity in 309 aa overlap;Dbxref=GOA:Q5NIL2,InterPro:IPR006225,UniProtKB%2FTrEMBL:Q5NIL2,Genbank:YP_169130.1,GeneID:3191616;gbkey=CDS;product=ribosomal large subunit pseudouridine synthase C;protein_id=YP_169130.1;transl_table=11
NC_006570.2	RefSeq	gene	58246	59550	.	-	.	ID=gene56;Name=FTT_0056c;Dbxref=GeneID:3192153;gbkey=Gene;locus_tag=FTT_0056c
NC_006570.2	RefSeq	CDS	58246	59550	.	-	0	ID=cds47;Name=YP_169131.1;Parent=gene56;Note=Similar to Q83D24 %28Q83D24%29 Major facilitator family transporter from Coxiella burnetii %28437 aa%29. FASTA: opt: 1028 Z-score: 1172.6 E%28%29: 2e-57 Smith-Waterman score: 1036%3B 40.187 identity in 428 aa overlap ORF ftt0056c;Dbxref=InterPro:IPR011701,UniProtKB%2FTrEMBL:Q5NIL1,Genbank:YP_169131.1,GeneID:3192153;gbkey=CDS;product=major facilitator transporter;protein_id=YP_169131.1;transl_table=11
NC_006570.2	RefSeq	gene	59627	60058	.	+	.	ID=gene57;Name=FTT_0057;Dbxref=GeneID:3192151;gbkey=Gene;locus_tag=FTT_0057
NC_006570.2	RefSeq	CDS	59627	60058	.	+	0	ID=cds48;Name=YP_169132.1;Parent=gene57;Note=ORF ftt0057;Dbxref=GOA:Q5NIL0,InterPro:IPR005598,UniProtKB%2FTrEMBL:Q5NIL0,Genbank:YP_169132.1,GeneID:3192151;gbkey=CDS;product=hypothetical protein;protein_id=YP_169132.1;transl_table=11
NC_006570.2	RefSeq	gene	60111	60902	.	+	.	ID=gene58;Name=atpB;Dbxref=GeneID:3192531;gbkey=Gene;gene=atpB;locus_tag=FTT_0058
NC_006570.2	RefSeq	CDS	60111	60902	.	+	0	ID=cds49;Name=YP_169133.1;Parent=gene58;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0;Dbxref=GOA:Q5NIK9,InterPro:IPR000568,UniProtKB%2FTrEMBL:Q5NIK9,Genbank:YP_169133.1,GeneID:3192531;gbkey=CDS;product=ATP synthase F0F1 subunit A;protein_id=YP_169133.1;transl_table=11
NC_006570.2	RefSeq	gene	60953	61258	.	+	.	ID=gene59;Name=atpE;Dbxref=GeneID:3192108;gbkey=Gene;gene=atpE;locus_tag=FTT_0059
NC_006570.2	RefSeq	CDS	60953	61258	.	+	0	ID=cds50;Name=YP_169134.1;Parent=gene59;Note=produces ATP from ADP in the presence of a proton gradient across the membrane%3B subunit C is part of the membrane proton channel F0;Dbxref=GOA:Q5NIK8,InterPro:IPR005953,UniProtKB%2FTrEMBL:Q5NIK8,Genbank:YP_169134.1,GeneID:3192108;gbkey=CDS;product=ATP synthase F0F1 subunit C;protein_id=YP_169134.1;transl_table=11
NC_006570.2	RefSeq	gene	61304	61774	.	+	.	ID=gene60;Name=atpF;Dbxref=GeneID:3191918;gbkey=Gene;gene=atpF;locus_tag=FTT_0060
NC_006570.2	RefSeq	CDS	61304	61774	.	+	0	ID=cds51;Name=YP_169135.1;Parent=gene60;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel.;Dbxref=GOA:Q5NIK7,InterPro:IPR005864,UniProtKB%2FSwiss-Prot:Q5NIK7,Genbank:YP_169135.1,GeneID:3191918;gbkey=CDS;product=ATP synthase F0F1 subunit B;protein_id=YP_169135.1;transl_table=11
NC_006570.2	RefSeq	gene	61794	62318	.	+	.	ID=gene61;Name=atpH;Dbxref=GeneID:3190962;gbkey=Gene;gene=atpH;locus_tag=FTT_0061
NC_006570.2	RefSeq	CDS	61794	62318	.	+	0	ID=cds52;Name=YP_169136.1;Parent=gene61;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane%3B the delta subunit is part of the catalytic core of the ATP synthase complex;Dbxref=GOA:Q5NIK6,InterPro:IPR000711,UniProtKB%2FTrEMBL:Q5NIK6,Genbank:YP_169136.1,GeneID:3190962;gbkey=CDS;product=ATP synthase F0F1 subunit delta;protein_id=YP_169136.1;transl_table=11
NC_006570.2	RefSeq	gene	62337	63878	.	+	.	ID=gene62;Name=atpA;Dbxref=GeneID:3190736;gbkey=Gene;gene=atpA;locus_tag=FTT_0062
NC_006570.2	RefSeq	CDS	62337	63878	.	+	0	ID=cds53;Name=YP_169137.1;Parent=gene62;Note=produces ATP from ADP in the presence of a proton gradient across the membrane%3B the alpha chain is a catalytic subunit;Dbxref=GOA:Q5NIK5,InterPro:IPR017458,UniProtKB%2FSwiss-Prot:Q5NIK5,Genbank:YP_169137.1,GeneID:3190736;gbkey=CDS;product=ATP synthase F0F1 subunit alpha;protein_id=YP_169137.1;transl_table=11
NC_006570.2	RefSeq	gene	63893	64789	.	+	.	ID=gene63;Name=atpG;Dbxref=GeneID:3192500;gbkey=Gene;gene=atpG;locus_tag=FTT_0063
NC_006570.2	RefSeq	CDS	63893	64789	.	+	0	ID=cds54;Name=YP_169138.1;Parent=gene63;Note=produces ATP from ADP in the presence of a proton gradient across the membrane%3B the gamma chain is a regulatory subunit;Dbxref=GOA:Q5NIK4,InterPro:IPR000131,UniProtKB%2FSwiss-Prot:Q5NIK4,Genbank:YP_169138.1,GeneID:3192500;gbkey=CDS;product=ATP synthase F0F1 subunit gamma;protein_id=YP_169138.1;transl_table=11
NC_006570.2	RefSeq	gene	64799	66175	.	+	.	ID=gene64;Name=atpD;Dbxref=GeneID:3190957;gbkey=Gene;gene=atpD;locus_tag=FTT_0064
NC_006570.2	RefSeq	CDS	64799	66175	.	+	0	ID=cds55;Name=YP_169139.1;Parent=gene64;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit;Dbxref=GOA:Q5NIK3,InterPro:IPR005722,UniProtKB%2FSwiss-Prot:Q5NIK3,Genbank:YP_169139.1,GeneID:3190957;gbkey=CDS;product=ATP synthase F0F1 subunit beta;protein_id=YP_169139.1;transl_table=11
NC_006570.2	RefSeq	gene	66188	66625	.	+	.	ID=gene65;Name=atpC;Dbxref=GeneID:3192519;gbkey=Gene;gene=atpC;locus_tag=FTT_0065
NC_006570.2	RefSeq	CDS	66188	66625	.	+	0	ID=cds56;Name=YP_169140.1;Parent=gene65;Note=produces ATP from ADP in the presence of a proton gradient across the membrane%3B the epsilon subunit is part of the catalytic core of the ATP synthase complex;Dbxref=GOA:Q5NIK2,InterPro:IPR001469,UniProtKB%2FSwiss-Prot:Q5NIK2,Genbank:YP_169140.1,GeneID:3192519;gbkey=CDS;product=ATP synthase F0F1 subunit epsilon;protein_id=YP_169140.1;transl_table=11
NC_006570.2	RefSeq	gene	66836	69679	.	+	.	ID=gene66;Name=FTT_0066;Dbxref=GeneID:3192095;gbkey=Gene;locus_tag=FTT_0066
NC_006570.2	RefSeq	CDS	66836	69679	.	+	0	ID=cds57;Name=YP_169141.1;Parent=gene66;Note=ORF ftt0066;Dbxref=GOA:Q5NIK1,InterPro:IPR001223,UniProtKB%2FTrEMBL:Q5NIK1,Genbank:YP_169141.1,GeneID:3192095;gbkey=CDS;product=hypothetical protein;protein_id=YP_169141.1;transl_table=11
NC_006570.2	RefSeq	gene	69696	70025	.	-	.	ID=gene67;Name=FTT_0067c;Dbxref=GeneID:3190708;gbkey=Gene;locus_tag=FTT_0067c
NC_006570.2	RefSeq	CDS	69696	70025	.	-	0	ID=cds58;Name=YP_169142.1;Parent=gene67;Note=Similar to Q8D879 Glutaredoxin-related protein from Vibrio vulnificus %28112 aa%29. FASTA: opt: 485 Z-score: 630.6 E%28%29: 2.8e-27 Smith-Waterman score: 485%3B 65.306 identity in 98 aa overlap ORF ftt0067c;Dbxref=GOA:Q5NIK0,InterPro:IPR014434,UniProtKB%2FTrEMBL:Q5NIK0,Genbank:YP_169142.1,GeneID:3190708;gbkey=CDS;product=glutaredoxin-like protein;protein_id=YP_169142.1;transl_table=11
NC_006570.2	RefSeq	gene	70161	70739	.	+	.	ID=gene68;Name=sodB;Dbxref=GeneID:3190713;gbkey=Gene;gene=sodB;locus_tag=FTT_0068
NC_006570.2	RefSeq	CDS	70161	70739	.	+	0	ID=cds59;Name=YP_169143.1;Parent=gene68;Note=Similar to SODF_ECOLI %28P09157%29 Superoxide dismutase %5BFe%5D from E. coli %28192 aa%29. FASTA: opt: 896 Z-score: 1143.2 E%28%29: 8.8e-56 Smith-Waterman score: 896%3B 66.316 identity in 190 aa overlap;Dbxref=GOA:Q5NIJ9,InterPro:IPR001189,UniProtKB%2FTrEMBL:Q5NIJ9,Genbank:YP_169143.1,GeneID:3190713;gbkey=CDS;product=superoxide dismutase;protein_id=YP_169143.1;transl_table=11
NC_006570.2	RefSeq	gene	70747	70932	.	-	.	ID=gene69;Name=FTT_0069c;Dbxref=GeneID:3190720;gbkey=Gene;locus_tag=FTT_0069c
NC_006570.2	RefSeq	CDS	70747	70932	.	-	0	ID=cds60;Name=YP_169144.1;Parent=gene69;Note=ORF ftt0069c;Dbxref=UniProtKB%2FTrEMBL:Q5NIJ8,Genbank:YP_169144.1,GeneID:3190720;gbkey=CDS;product=hypothetical protein;protein_id=YP_169144.1;transl_table=11
NC_006570.2	RefSeq	gene	70944	72209	.	-	.	ID=gene70;Name=ampG;Dbxref=GeneID:3192356;gbkey=Gene;gene=ampG;locus_tag=FTT_0070c
NC_006570.2	RefSeq	CDS	70944	72209	.	-	0	ID=cds61;Name=YP_169145.1;Parent=gene70;Note=Similar to AMPG_ECOLI %28P36670%29 AmpG protein from E. coli %28491 aa%29. FASTA: opt: 996 Z-score: 1121.1 E%28%29: 1.5e-54 Smith-Waterman score: 996%3B 38.614 identity in 404 aa overlap;Dbxref=InterPro:IPR011701,UniProtKB%2FTrEMBL:Q5NIJ7,Genbank:YP_169145.1,GeneID:3192356;gbkey=CDS;product=major facilitator superfamily transporter;protein_id=YP_169145.1;transl_table=11
NC_006570.2	RefSeq	gene	72298	73572	.	-	.	ID=gene71;Name=gltA;Dbxref=GeneID:3192375;gbkey=Gene;gene=gltA;locus_tag=FTT_0071c
NC_006570.2	RefSeq	CDS	72298	73572	.	-	0	ID=cds62;Name=YP_169146.1;Parent=gene71;Note=Similar to CISY_PSEAE %28P14165%29 Citrate synthase from Pseudomonas aeruginosa %28428 aa%29. FASTA: opt: 1540 Z-score: 1956.3 E%28%29: 4.5e-101 Smith-Waterman score: 1540%3B 57.353 identity in 408 aa overlap;Dbxref=GOA:Q5NIJ6,InterPro:IPR016142,UniProtKB%2FTrEMBL:Q5NIJ6,Genbank:YP_169146.1,GeneID:3192375;gbkey=CDS;product=citrate synthase;protein_id=YP_169146.1;transl_table=11
NC_006570.2	RefSeq	gene	73815	74288	.	+	.	ID=gene72;Name=sdhC;Dbxref=GeneID:3191400;gbkey=Gene;gene=sdhC;locus_tag=FTT_0072
NC_006570.2	RefSeq	CDS	73815	74288	.	+	0	ID=cds63;Name=YP_169147.1;Parent=gene72;Note=Similar to Q884A1 Succinate dehydrogenase%2C cytochrome b556 subunit from Pseudomonas syringae %28124 aa%29. FASTA: opt: 332 Z-score: 413.6 E%28%29: 3.8e-15 Smith-Waterman score: 332%3B 39.844identity in 128 aa overlap;Dbxref=GOA:Q5NIJ5,InterPro:IPR018495,UniProtKB%2FTrEMBL:Q5NIJ5,Genbank:YP_169147.1,GeneID:3191400;gbkey=CDS;product=succinate dehydrogenase%2C cytochrome b556;protein_id=YP_169147.1;transl_table=11
NC_006570.2	RefSeq	gene	74264	74632	.	+	.	ID=gene73;Name=sdhD;Dbxref=GeneID:3192101;gbkey=Gene;gene=sdhD;locus_tag=FTT_0073
NC_006570.2	RefSeq	CDS	74264	74632	.	+	0	ID=cds64;Name=YP_169148.1;Parent=gene73;Note=Similar to Q88FA6 Succinate dehydrogenase%2C hydrophobic membrane anchor protein from Pseudomonas putida %28122 aa%29. FASTA: opt: 242 Z-score: 306.8 E%28%29: 3.4e-09 Smith-Waterman score: 242%3B 34.677 identity in 124 aa overlap;Dbxref=GOA:Q5NIJ4,InterPro:IPR014312,UniProtKB%2FTrEMBL:Q5NIJ4,Genbank:YP_169148.1,GeneID:3192101;gbkey=CDS;product=succinate dehydrogenase hydrophobic membrane anchor protein;protein_id=YP_169148.1;transl_table=11
NC_006570.2	RefSeq	gene	74645	76438	.	+	.	ID=gene74;Name=sdhA;Dbxref=GeneID:3191590;gbkey=Gene;gene=sdhA;locus_tag=FTT_0074
NC_006570.2	RefSeq	CDS	74645	76438	.	+	0	ID=cds65;Name=YP_169149.1;Parent=gene74;Note=Similar to Q9I3D5 Succinate dehydrogenase %28A subunit%29 from Pseudomonas aeruginosa %28590 aa%29. FASTA: opt: 2468 Z-score: 2874.7 E%28%29: 3.2e-152 Smith-Waterman score: 2468%3B 61.139 identity in 597 aa overlap;Dbxref=GOA:Q5NIJ3,InterPro:IPR014006,UniProtKB%2FTrEMBL:Q5NIJ3,Genbank:YP_169149.1,GeneID:3191590;gbkey=CDS;product=succinate dehydrogenase%2C catalytic and NAD%2Fflavoprotein subunit;protein_id=YP_169149.1;transl_table=11
NC_006570.2	RefSeq	gene	76456	77157	.	+	.	ID=gene75;Name=sdhB;Dbxref=GeneID:3191270;gbkey=Gene;gene=sdhB;locus_tag=FTT_0075
NC_006570.2	RefSeq	CDS	76456	77157	.	+	0	ID=cds66;Name=YP_169150.1;Parent=gene75;Note=part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex %28trimer of tetramers%29%3B SdhA%2FB are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC%2FD which are the membrane components and form cytochrome b556%3B SdhC binds ubiquinone%3B oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol%3B the catalytic subunits are similar to fumarate reductase;Dbxref=GOA:Q5NIJ2,InterPro:IPR017900,UniProtKB%2FTrEMBL:Q5NIJ2,Genbank:YP_169150.1,GeneID:3191270;gbkey=CDS;product=succinate dehydrogenase iron-sulfur subunit;protein_id=YP_169150.1;transl_table=11
NC_006570.2	RefSeq	gene	77175	80000	.	+	.	ID=gene76;Name=sucA;Dbxref=GeneID:3190733;gbkey=Gene;gene=sucA;locus_tag=FTT_0076
NC_006570.2	RefSeq	CDS	77175	80000	.	+	0	ID=cds67;Name=YP_169151.1;Parent=gene76;Note=SucA%3B E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate%3B SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide;Dbxref=GOA:Q5NIJ1,InterPro:IPR011603,UniProtKB%2FTrEMBL:Q5NIJ1,Genbank:YP_169151.1,GeneID:3190733;gbkey=CDS;product=2-oxoglutarate dehydrogenase E1;protein_id=YP_169151.1;transl_table=11
NC_006570.2	RefSeq	gene	80026	81495	.	+	.	ID=gene77;Name=sucB;Dbxref=GeneID:3190739;gbkey=Gene;gene=sucB;locus_tag=FTT_0077
NC_006570.2	RefSeq	CDS	80026	81495	.	+	0	ID=cds68;Name=YP_169152.1;Parent=gene77;Note=Similar to Q8EFN9 2-oxoglutarate dehydrogenase%2CE2 component%2C dihydrolipoamide succinyltransferase from Shewanella oneidensis %28395 aa%29. FASTA: opt: 1379 Z-score: 1563.0 E%28%29: 3.6e-79 Smith-Waterman score: 1379%3B 55.949 identity in 395 aa overlap;Dbxref=GOA:Q5NIJ0,InterPro:IPR006255,UniProtKB%2FTrEMBL:Q5NIJ0,Genbank:YP_169152.1,GeneID:3190739;gbkey=CDS;product=dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase complex;protein_id=YP_169152.1;transl_table=11
NC_006570.2	RefSeq	gene	81535	82062	.	+	.	ID=gene78;Name=apt;Dbxref=GeneID:3191768;gbkey=Gene;gene=apt;locus_tag=FTT_0078
NC_006570.2	RefSeq	CDS	81535	82062	.	+	0	ID=cds69;Name=YP_169153.1;Parent=gene78;Note=catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis;Dbxref=GOA:Q5NII9,InterPro:IPR005764,UniProtKB%2FSwiss-Prot:Q5NII9,Genbank:YP_169153.1,GeneID:3191768;gbkey=CDS;product=adenine phosphoribosyltransferase;protein_id=YP_169153.1;transl_table=11
NC_006570.2	RefSeq	gene	82073	83404	.	+	.	ID=gene79;Name=glmM;Dbxref=GeneID:3191618;gbkey=Gene;gene=glmM;locus_tag=FTT_0079
NC_006570.2	RefSeq	CDS	82073	83404	.	+	0	ID=cds70;Name=YP_169154.1;Parent=gene79;Note=catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate;Dbxref=GOA:Q5NII8,InterPro:IPR016066,UniProtKB%2FSwiss-Prot:Q5NII8,Genbank:YP_169154.1,GeneID:3191618;gbkey=CDS;product=phosphoglucosamine mutase;protein_id=YP_169154.1;transl_table=11
NC_006570.2	RefSeq	gene	83407	84168	.	+	.	ID=gene80;Name=tpiA;Dbxref=GeneID:3191461;gbkey=Gene;gene=tpiA;locus_tag=FTT_0080
NC_006570.2	RefSeq	CDS	83407	84168	.	+	0	ID=cds71;Name=YP_169155.1;Parent=gene80;Note=Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate;Dbxref=GOA:Q5NII7,InterPro:IPR013785,UniProtKB%2FSwiss-Prot:Q5NII7,Genbank:YP_169155.1,GeneID:3191461;gbkey=CDS;product=triosephosphate isomerase;protein_id=YP_169155.1;transl_table=11
NC_006570.2	RefSeq	gene	84156	84509	.	+	.	ID=gene81;Name=secG;Dbxref=GeneID:3192467;gbkey=Gene;gene=secG;locus_tag=FTT_0081
NC_006570.2	RefSeq	CDS	84156	84509	.	+	0	ID=cds72;Name=YP_169156.1;Parent=gene81;Note=Similar to Q9KU83 Preprotein translocase%2C SecG subunit from Vibrio cholerae %28111 aa%29. FASTA: opt: 283 Z-score: 369.6 E%28%29: 1.1e-12 Smith-Waterman score: 289%3B 45.299identity in 117 aa overlap. Together with SecE and SecY forming an integral membrane complex.;Dbxref=GOA:Q5NII6,InterPro:IPR004692,UniProtKB%2FTrEMBL:Q5NII6,Genbank:YP_169156.1,GeneID:3192467;gbkey=CDS;product=preprotein translocase subunit SecG;protein_id=YP_169156.1;transl_table=11
NC_006570.2	RefSeq	gene	84519	84601	.	+	.	ID=gene82;Name=tRNA-Leu %28GAG%29;Dbxref=GeneID:3192260;description=tRNA-Leu %28GAG%29;gbkey=Gene;gene=tRNA-Leu %28GAG%29;locus_tag=FTT_t02
NC_006570.2	RefSeq	tRNA	84519	84601	.	+	.	ID=rna1;Dbxref=GeneID:3192260;codons=17;gbkey=tRNA;product=tRNA-Leu
NC_006570.2	RefSeq	exon	84519	84601	.	+	.	ID=id14;Parent=rna1;Dbxref=GeneID:3192260;codons=17;gbkey=tRNA;product=tRNA-Leu
NC_006570.2	RefSeq	gene	84679	85635	.	+	.	ID=gene83;Name=FTT_0082;Dbxref=GeneID:3190716;gbkey=Gene;locus_tag=FTT_0082;pseudo=true
NC_006570.2	RefSeq	gene	85720	86196	.	+	.	ID=gene84;Name=FTT_0083;Dbxref=GeneID:3190719;gbkey=Gene;locus_tag=FTT_0083
NC_006570.2	RefSeq	CDS	85720	86196	.	+	0	ID=cds73;Name=YP_169157.1;Parent=gene84;Note=ORF ftt0083;Dbxref=UniProtKB%2FTrEMBL:Q5NII5,Genbank:YP_169157.1,GeneID:3190719;gbkey=CDS;product=hypothetical protein;protein_id=YP_169157.1;transl_table=11
NC_006570.2	RefSeq	gene	86193	87335	.	-	.	ID=gene85;Name=hemN;Dbxref=GeneID:3192423;gbkey=Gene;gene=hemN;locus_tag=FTT_0084c
NC_006570.2	RefSeq	CDS	86193	87335	.	-	0	ID=cds74;Name=YP_169158.1;Parent=gene85;Note=Similar to Q87V87 Oxygen-independent coproporphyrinogen III oxidase%2C%2Cfrom Pseudomonas syringae %28404 aa%29. FASTA: opt: 1156 Z-score: 1386.6 E%28%29: 2.4e-69 Smith-Waterman score: 1156%3B 46.791 identity in 374 aa overlap;Dbxref=GOA:Q5NII4,InterPro:IPR010723,UniProtKB%2FTrEMBL:Q5NII4,Genbank:YP_169158.1,GeneID:3192423;gbkey=CDS;product=oxygen-independent coproporphyrinogen III oxidase;protein_id=YP_169158.1;transl_table=11
NC_006570.2	RefSeq	gene	87340	87717	.	-	.	ID=gene86;Name=FTT_0085c;Dbxref=GeneID:3190725;gbkey=Gene;locus_tag=FTT_0085c
NC_006570.2	RefSeq	CDS	87340	87717	.	-	0	ID=cds75;Name=YP_169159.1;Parent=gene86;Note=Similar to YWCD_BACSU P39602 Hypothetical protein ywcD from Bacillus subtilis %28127 aa%29. FASTA: opt: 162 Z-score: 223.9 E%28%29: 0.00013 Smith-Waterman score: 162%3B 26.667 identity in 120 aa overlap ORF ftt0085c;Dbxref=GOA:Q5NII3,InterPro:IPR007267,UniProtKB%2FTrEMBL:Q5NII3,Genbank:YP_169159.1,GeneID:3190725;gbkey=CDS;product=hypothetical protein;protein_id=YP_169159.1;transl_table=11
NC_006570.2	RefSeq	gene	87787	88665	.	+	.	ID=gene87;Name=FTT_0086;Dbxref=GeneID:3190724;gbkey=Gene;locus_tag=FTT_0086
NC_006570.2	RefSeq	CDS	87787	88665	.	+	0	ID=cds76;Name=YP_169160.1;Parent=gene87;Note=Similar to Q9I078 Hypothetical protein PA2765 from Pseudomonas aeruginosa %28299 aa%29. FASTA: opt: 656 Z-score: 793.3 E%28%29: 2.4e-36 Smith-Waterman score: 656%3B 36.678 identity in 289 aa overlap ORF ftt0086;Dbxref=InterPro:IPR006314,UniProtKB%2FTrEMBL:Q5NII2,Genbank:YP_169160.1,GeneID:3190724;gbkey=CDS;product=hypothetical protein;protein_id=YP_169160.1;transl_table=11
NC_006570.2	RefSeq	gene	88770	91583	.	+	.	ID=gene88;Name=acnA;Dbxref=GeneID:3192406;gbkey=Gene;gene=acnA;locus_tag=FTT_0087
NC_006570.2	RefSeq	CDS	88770	91583	.	+	0	ID=cds77;Name=YP_169161.1;Parent=gene88;Note=Catalyzes the conversion of citrate to isocitrate;Dbxref=GOA:Q5NII1,InterPro:IPR018136,UniProtKB%2FTrEMBL:Q5NII1,Genbank:YP_169161.1,GeneID:3192406;gbkey=CDS;product=aconitate hydratase;protein_id=YP_169161.1;transl_table=11
NC_006570.2	RefSeq	gene	91678	92706	.	+	.	ID=gene89;Name=pilT;Dbxref=GeneID:3190704;gbkey=Gene;gene=pilT;locus_tag=FTT_0088
NC_006570.2	RefSeq	CDS	91678	92706	.	+	0	ID=cds78;Name=YP_169162.1;Parent=gene89;Note=Similar to Q8EBZ4 Twitching motility protein PilT from Shewanella oneidensis %28345 aa%29. FASTA: opt: 1226 Z-score: 1391.3 E%28%29: 1.3e-69 Smith-Waterman score: 1226%3B 57.186 identity in 334 aa overlap Required for pili retraction probably by filament disassembly. Homologous to pilB but which has the opposite effect. Unique to type IV pili.;Dbxref=GOA:Q5NII0,InterPro:IPR006321,UniProtKB%2FTrEMBL:Q5NII0,Genbank:YP_169162.1,GeneID:3190704;gbkey=CDS;product=Type IV pili nucleotide-binding protein;protein_id=YP_169162.1;transl_table=11
NC_006570.2	RefSeq	gene	92773	93771	.	-	.	ID=gene90;Name=FTT_0089c;Dbxref=GeneID:3190735;gbkey=Gene;locus_tag=FTT_0089c;pseudo=true
NC_006570.2	RefSeq	gene	93768	94214	.	-	.	ID=gene91;Name=FTT_0090c;Dbxref=GeneID:3190741;gbkey=Gene;locus_tag=FTT_0090c
NC_006570.2	RefSeq	CDS	93768	94214	.	-	0	ID=cds79;Name=YP_169163.1;Parent=gene91;Note=Similar to Q87GR3 Hypothetical protein from Vibrio parahaemolyticus %28148 aa%29. FASTA: opt: 160 Z-score: 212.3 E%28%29: 0.00057 Smith-Waterman score: 160%3B 29.104 identity in 134 aa overlap ORF ftt0090c;Dbxref=UniProtKB%2FTrEMBL:Q5NIH9,Genbank:YP_169163.1,GeneID:3190741;gbkey=CDS;product=hypothetical protein;protein_id=YP_169163.1;transl_table=11
NC_006570.2	RefSeq	gene	94225	95187	.	-	.	ID=gene92;Name=appB;Dbxref=GeneID:3190938;gbkey=Gene;gene=appB;locus_tag=FTT_0091c
NC_006570.2	RefSeq	CDS	94225	95187	.	-	0	ID=cds80;Name=YP_169164.1;Parent=gene92;Note=Similar to Q87H27 Cytochrome BD2%2C subunit II from Vibrio parahaemolyticus %28335 aa%29. FASTA: opt: 573 Z-score: 669.5 E%28%29: 1.9e-29 Smith-Waterman score: 750%3B 34.743 identity in 331 aa overlap;Dbxref=GOA:Q5NIH8,InterPro:IPR003317,UniProtKB%2FTrEMBL:Q5NIH8,Genbank:YP_169164.1,GeneID:3190938;gbkey=CDS;product=cytochrome oxidase bd-II subunit II;protein_id=YP_169164.1;transl_table=11
NC_006570.2	RefSeq	gene	95194	96567	.	-	.	ID=gene93;Name=appC;Dbxref=GeneID:3190941;gbkey=Gene;gene=appC;locus_tag=FTT_0092c;pseudo=true
NC_006570.2	RefSeq	gene	96803	97684	.	+	.	ID=gene94;Name=FTT_0093;Dbxref=GeneID:3190730;gbkey=Gene;locus_tag=FTT_0093
NC_006570.2	RefSeq	CDS	96803	97684	.	+	0	ID=cds81;Name=YP_169165.1;Parent=gene94;Note=Similar to Q8FFI5 Hypothetical protein yfcH from E. coli %28297 aa%29. FASTA: opt: 498 Z-score: 611.0 E%28%29: 3.8e-26 Smith-Waterman score: 498%3B 32.673 identity in 303 aa overlap ORF ftt0093;Dbxref=GOA:Q5NIH7,InterPro:IPR016040,UniProtKB%2FTrEMBL:Q5NIH7,Genbank:YP_169165.1,GeneID:3190730;gbkey=CDS;product=hypothetical protein;protein_id=YP_169165.1;transl_table=11
NC_006570.2	RefSeq	gene	97681	99108	.	-	.	ID=gene95;Name=qseC;Dbxref=GeneID:3191649;gbkey=Gene;gene=qseC;locus_tag=FTT_0094c
NC_006570.2	RefSeq	CDS	97681	99108	.	-	0	ID=cds82;Name=YP_169166.1;Parent=gene95;Note=Similar to AAO90737 %28Q83CA0%29 Sensor histidine kinase from Coxiella burnetii %28478 aa%29. FASTA: opt: 653 Z-score: 752.8 E%28%29: 4.9e-34 Smith-Waterman score: 677%3B 29.083 identity in 447 aa overlap Sensory histidine kinase in two-component regulatory system with QseB%2C regulates flagella and motility by quorum sensing in E. coli%2C according to Q8X524;Dbxref=GOA:Q5NIH6,InterPro:IPR005467,UniProtKB%2FTrEMBL:Q5NIH6,Genbank:YP_169166.1,GeneID:3191649;gbkey=CDS;product=sensor histidine kinase;protein_id=YP_169166.1;transl_table=11
NC_006570.2	RefSeq	gene	99224	100180	.	+	.	ID=gene96;Name=FTT_0095;Dbxref=GeneID:3192116;gbkey=Gene;locus_tag=FTT_0095
NC_006570.2	RefSeq	CDS	99224	100180	.	+	0	ID=cds83;Name=YP_169167.1;Parent=gene96;Note=ORF ftt0095;Dbxref=UniProtKB%2FTrEMBL:Q5NIH5,Genbank:YP_169167.1,GeneID:3192116;gbkey=CDS;product=hypothetical protein;protein_id=YP_169167.1;transl_table=11
NC_006570.2	RefSeq	gene	100422	101462	.	+	.	ID=gene97;Name=FTT_0096;Dbxref=GeneID:3192159;gbkey=Gene;locus_tag=FTT_0096
NC_006570.2	RefSeq	CDS	100422	101462	.	+	0	ID=cds84;Name=YP_169168.1;Parent=gene97;Note=ORF ftt0096;Dbxref=InterPro:IPR003806,UniProtKB%2FTrEMBL:Q5NIH4,Genbank:YP_169168.1,GeneID:3192159;gbkey=CDS;product=hypothetical protein;protein_id=YP_169168.1;transl_table=11
NC_006570.2	RefSeq	gene	101596	102141	.	+	.	ID=gene98;Name=FTT_0097;Dbxref=GeneID:3192161;gbkey=Gene;locus_tag=FTT_0097
NC_006570.2	RefSeq	CDS	101596	102141	.	+	0	ID=cds85;Name=YP_169169.1;Parent=gene98;Note=ORF ftt0097;Dbxref=UniProtKB%2FTrEMBL:Q5NIH3,Genbank:YP_169169.1,GeneID:3192161;gbkey=CDS;product=hypothetical protein;protein_id=YP_169169.1;transl_table=11
NC_006570.2	RefSeq	repeat_region	102116	102127	.	-	.	ID=id15;Note=ISFtu1 12bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	gene	102215	102999	.	-	.	ID=gene99;Name=isftu1;Dbxref=GeneID:3190940;gbkey=Gene;gene=isftu1;locus_tag=FTT_0098c
NC_006570.2	RefSeq	CDS	102673	102999	.	-	0	ID=cds86;Name=YP_169170.1;Parent=gene99;Note=ISFtu1. Transposase%2C member of the IS630 Tc-1 mariner family. Identical to Q93EJ6  transposase from Francisella tularensis %28118 aa%29 from aa 144-261. Identical to Q93EJ7  transposase from Francisella tularensis %28126 aa%29 from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF%27s. ORF1 %28identical to Q93EJ7%29 contains a programmed ribosomal frameshifting motif%2C 5%27-AAAAAAAG-3%27 at aa position 109 which permits frameshifting to ORF2 %28identical to Q93EJ6%29 to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family%2C and also mariner elements%2C show that this transposase shares strongly conserved residues%2C including a fully conserved dipeptide%2CAsp-Glu %28DE%29%2C and a block consisting of a fully conserved Asp and highly conserved Glu%2C separated by 34 or 35 residues %28D35E%29. The conserved dipeptide is only present if ribosomal frameshifting occurs.;Dbxref=UniProtKB%2FTrEMBL:Q5NIH2,Genbank:YP_169170.1,GeneID:3190940;gbkey=CDS;product=transposase;protein_id=YP_169170.1;transl_table=11
NC_006570.2	RefSeq	CDS	102215	102673	.	-	0	ID=cds86;Name=YP_169170.1;Parent=gene99;Note=ISFtu1. Transposase%2C member of the IS630 Tc-1 mariner family. Identical to Q93EJ6  transposase from Francisella tularensis %28118 aa%29 from aa 144-261. Identical to Q93EJ7  transposase from Francisella tularensis %28126 aa%29 from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF%27s. ORF1 %28identical to Q93EJ7%29 contains a programmed ribosomal frameshifting motif%2C 5%27-AAAAAAAG-3%27 at aa position 109 which permits frameshifting to ORF2 %28identical to Q93EJ6%29 to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family%2C and also mariner elements%2C show that this transposase shares strongly conserved residues%2C including a fully conserved dipeptide%2CAsp-Glu %28DE%29%2C and a block consisting of a fully conserved Asp and highly conserved Glu%2C separated by 34 or 35 residues %28D35E%29. The conserved dipeptide is only present if ribosomal frameshifting occurs.;Dbxref=UniProtKB%2FTrEMBL:Q5NIH2,Genbank:YP_169170.1,GeneID:3190940;gbkey=CDS;product=transposase;protein_id=YP_169170.1;transl_table=11
NC_006570.2	RefSeq	repeat_region	103006	103024	.	+	.	ID=id16;Note=ISFtu2 19bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	gene	103101	103844	.	+	.	ID=gene100;Name=isftu2;Dbxref=GeneID:3190803;gbkey=Gene;gene=isftu2;locus_tag=FTT_0099
NC_006570.2	RefSeq	CDS	103101	103844	.	+	0	ID=cds87;Name=YP_169171.1;Parent=gene100;Note=ISFtu2. Transposase%2C member of the IS5 family. Identical to Q8GM03  transposase from Francisella tularensis %28247 aa%29.;Dbxref=GOA:Q8GM03,InterPro:IPR002559,UniProtKB%2FTrEMBL:Q8GM03,Genbank:YP_169171.1,GeneID:3190803;gbkey=CDS;product=transposase;protein_id=YP_169171.1;transl_table=11
NC_006570.2	RefSeq	repeat_region	103852	103870	.	+	.	ID=id17;Note=ISFtu2 19bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	gene	103872	104285	.	+	.	ID=gene101;Name=FTT_0100;Dbxref=GeneID:3190707;gbkey=Gene;locus_tag=FTT_0100;pseudo=true
NC_006570.2	RefSeq	gene	104514	105527	.	+	.	ID=gene102;Name=FTT_0101;Dbxref=GeneID:3192163;gbkey=Gene;locus_tag=FTT_0101
NC_006570.2	RefSeq	CDS	104514	105527	.	+	0	ID=cds88;Name=YP_169172.1;Parent=gene102;Note=Similar to Y402_RICPR %28Q9ZDC9%29 Hypothetical protein RP402 from Rickettsia prowazekii %28317 aa%29. FASTA: opt: 431 Z-score: 518.0 E%28%29: 5.9e-21 Smith-Waterman score: 432%3B 28.909 identity in 339 aa overlap ORF ftt0101;Dbxref=InterPro:IPR003507,UniProtKB%2FTrEMBL:Q5NIH0,Genbank:YP_169172.1,GeneID:3192163;gbkey=CDS;product=hypothetical protein;protein_id=YP_169172.1;transl_table=11
NC_006570.2	RefSeq	repeat_region	106087	106097	.	+	.	ID=id18;Note=ISFtu4 11bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	gene	106178	107034	.	+	.	ID=gene103;Name=FTT_0102;Dbxref=GeneID:3192111;gbkey=Gene;locus_tag=FTT_0102;pseudo=true
NC_006570.2	RefSeq	gene	106972	107553	.	-	.	ID=gene104;Name=FTT_0103c;Dbxref=GeneID:3192110;gbkey=Gene;locus_tag=FTT_0103c
NC_006570.2	RefSeq	CDS	106972	107553	.	-	0	ID=cds89;Name=YP_169173.1;Parent=gene104;Note=ORF ftt0103c;Dbxref=UniProtKB%2FTrEMBL:Q5NIG9,Genbank:YP_169173.1,GeneID:3192110;gbkey=CDS;product=hypothetical protein;protein_id=YP_169173.1;transl_table=11
NC_006570.2	RefSeq	repeat_region	107039	107049	.	+	.	ID=id19;Note=ISFtu4 11bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	gene	107798	109075	.	-	.	ID=gene105;Name=FTT_0104c;Dbxref=GeneID:3192109;gbkey=Gene;locus_tag=FTT_0104c
NC_006570.2	RefSeq	CDS	107798	109075	.	-	0	ID=cds90;Name=YP_169174.1;Parent=gene105;Note=Similar to Q83DX6 Major facilitator family transporter from Coxiella burnetii %28421 aa%29. FASTA: opt: 995 Z-score: 1049.4 E%28%29: 1.5e-50 Smith-Waterman score: 995%3B 39.066identity in 407 aa overlap ORF ftt0104c;Dbxref=InterPro:IPR011701,UniProtKB%2FTrEMBL:Q5NIG8,Genbank:YP_169174.1,GeneID:3192109;gbkey=CDS;product=major facilitator transporter;protein_id=YP_169174.1;transl_table=11
NC_006570.2	RefSeq	gene	109207	112320	.	-	.	ID=gene106;Name=FTT_0105c;Dbxref=GeneID:3190746;gbkey=Gene;locus_tag=FTT_0105c
NC_006570.2	RefSeq	CDS	109207	112320	.	-	0	ID=cds91;Name=YP_169175.1;Parent=gene106;Note=Similar to AAO90606 %28Q83CM1%29 Transporter%2CAcrB%2FAcrD%2FAcrF family from Coxiella burnetii %281019 aa%29. FASTA: opt: 2662 Z-score: 2840.6 E%28%29: 2.3e-150 Smith-Waterman score: 3071%3B 45.171identity in 1025 aa overlap ORF ftt0105c;Dbxref=GOA:Q5NIG7,InterPro:IPR001036,UniProtKB%2FTrEMBL:Q5NIG7,Genbank:YP_169175.1,GeneID:3190746;gbkey=CDS;product=AcrB%2FAcrD%2FAcrF family transporter;protein_id=YP_169175.1;transl_table=11
NC_006570.2	RefSeq	gene	112320	113693	.	-	.	ID=gene107;Name=FTT_0106c;Dbxref=GeneID:3192105;gbkey=Gene;locus_tag=FTT_0106c
NC_006570.2	RefSeq	CDS	112320	113693	.	-	0	ID=cds92;Name=YP_169176.1;Parent=gene107;Note=Similar to Q83CM0 Efflux transporter%2C RND family%2C MFP subunit from Coxiella burnetti %28380 aa%29. FASTA: opt: 732 Z-score: 824.0 E%28%29: 5.2e-38 Smith-Waterman score: 781%3B 34.748identity in 377 aa overlap ORF ftt0106c;Dbxref=GOA:Q5NIG6,InterPro:IPR006143,UniProtKB%2FTrEMBL:Q5NIG6,Genbank:YP_169176.1,GeneID:3192105;gbkey=CDS;product=RND efflux transporter;protein_id=YP_169176.1;transl_table=11
NC_006570.2	RefSeq	gene	113706	114197	.	-	.	ID=gene108;Name=dsbB;Dbxref=GeneID:3191543;gbkey=Gene;gene=dsbB;locus_tag=FTT_0107c
NC_006570.2	RefSeq	CDS	113706	114197	.	-	0	ID=cds93;Name=YP_169177.1;Parent=gene108;Note=Similar to DSBB_NEIMB %28Q9JYC6%29 Disulfide bond formation protein B %28disuphide oxidoreductase%29 from Neisseria meningitidis %28162 aa%29. FASTA: opt: 171 Z-score: 223.1 E%28%29: 0.00014 Smith-Waterman score: 171%3B 27.344 identity in 128 aa overlap;Dbxref=GOA:Q5NIG5,InterPro:IPR003752,UniProtKB%2FTrEMBL:Q5NIG5,Genbank:YP_169177.1,GeneID:3191543;gbkey=CDS;product=disulfide bond formation protein;protein_id=YP_169177.1;transl_table=11
NC_006570.2	RefSeq	gene	114237	115319	.	-	.	ID=gene109;Name=cca;Dbxref=GeneID:3191540;gbkey=Gene;gene=cca;locus_tag=FTT_0108c
NC_006570.2	RefSeq	CDS	114237	115319	.	-	0	ID=cds94;Name=YP_169178.1;Parent=gene109;Note=catalyzes the addition and repair of the 3%27-terminal CCA sequence in tRNA%3B these proteins belong to the CCA-adding enzyme subfamily 2 which does not have phosphohydrolase activity;Dbxref=GOA:Q5NIG4,InterPro:IPR002646,UniProtKB%2FSwiss-Prot:Q5NIG4,Genbank:YP_169178.1,GeneID:3191540;gbkey=CDS;product=tRNA CCA-pyrophosphorylase;protein_id=YP_169178.1;transl_table=11
NC_006570.2	RefSeq	gene	115424	117253	.	+	.	ID=gene110;Name=msbA;Dbxref=GeneID:3191929;gbkey=Gene;gene=msbA;locus_tag=FTT_0109
NC_006570.2	RefSeq	CDS	115424	117253	.	+	0	ID=cds95;Name=YP_169179.1;Parent=gene110;Note=lipid A transport protein%2C ABC transporter%2CATP-binding and membrane protein. Similar to Q47908 ValA from Francisella novicida strain U112 %28572 aa%29. FASTA: opt: 3334 Z-score: 3684.8 E%28%29: 2.4e-197 Smith-Waterman score: 3334%3B 97.810 identity in 548 aa overlap %2854-601:13-559%29. Similar to MSBA_HAEIN %28P44407%29 Lipid A export ATP-binding protein from Haemophilus influenzae %28587 aa%29. FASTA: opt: 1570 Z-score: 1735.1 E%28%29: 9.4e-89 Smith-Waterman score: 1570%3B 41.913identity in 575 aa overlap.;Dbxref=GOA:Q5NIG3,InterPro:IPR017940,UniProtKB%2FSwiss-Prot:Q5NIG3,Genbank:YP_169179.1,GeneID:3191929;gbkey=CDS;product=lipid A transport protein ABC transporter ATP-binding protein%2Fpermease;protein_id=YP_169179.1;transl_table=11
NC_006570.2	RefSeq	gene	117259	118227	.	+	.	ID=gene111;Name=lpxK;Dbxref=GeneID:3191936;gbkey=Gene;gene=lpxK;locus_tag=FTT_0110
NC_006570.2	RefSeq	CDS	117259	118227	.	+	0	ID=cds96;Name=YP_169180.1;Parent=gene111;Note=transfers the gamma-phosphate of ATP to the 4%27 position of a tetraacyldisaccharide 1-phosphate intermediate to form tetraacyldisaccharide 1%2C4%27-bis-phosphate;Dbxref=GOA:Q5NIG2,InterPro:IPR003758,UniProtKB%2FSwiss-Prot:Q5NIG2,Genbank:YP_169180.1,GeneID:3191936;gbkey=CDS;product=tetraacyldisaccharide 4%27-kinase;protein_id=YP_169180.1;transl_table=11
NC_006570.2	RefSeq	gene	118323	121016	.	+	.	ID=gene112;Name=polA;Dbxref=GeneID:3191573;gbkey=Gene;gene=polA;locus_tag=FTT_0111
NC_006570.2	RefSeq	CDS	118323	121016	.	+	0	ID=cds97;Name=YP_169181.1;Parent=gene112;Note=Similar to AAO91288 %28Q83AT5%29 DNA polymerase I from Coxiella burnetii %28895 aa%29. FASTA: opt: 2961 Z-score: 3329.8 E%28%29: 1.4e-177 Smith-Waterman score: 2961%3B 52.058 identity in 899 aa overlap;Dbxref=GOA:Q5NIG1,InterPro:IPR019760,UniProtKB%2FTrEMBL:Q5NIG1,Genbank:YP_169181.1,GeneID:3191573;gbkey=CDS;product=DNA polymerase I;protein_id=YP_169181.1;transl_table=11
NC_006570.2	RefSeq	gene	121036	121812	.	+	.	ID=gene113;Name=FTT_0112;Dbxref=GeneID:3192123;gbkey=Gene;locus_tag=FTT_0112
NC_006570.2	RefSeq	CDS	121036	121812	.	+	0	ID=cds98;Name=YP_169182.1;Parent=gene113;Note=type III%3B catalyzes the formation of %28R%29-4%27-phosphopantothenate from %28R%29-pantothenate in coenzyme A biosynthesis%3B type III pantothenate kinases are not subject to feedback inhibition from coenzyme A and have a high Km for ATP;Dbxref=GOA:Q5NIG0,InterPro:IPR004619,UniProtKB%2FSwiss-Prot:Q5NIG0,Genbank:YP_169182.1,GeneID:3192123;gbkey=CDS;product=pantothenate kinase;protein_id=YP_169182.1;transl_table=11
NC_006570.2	RefSeq	gene	121817	123061	.	+	.	ID=gene114;Name=deoB;Dbxref=GeneID:3191513;gbkey=Gene;gene=deoB;locus_tag=FTT_0113
NC_006570.2	RefSeq	CDS	121817	123061	.	+	0	ID=cds99;Name=YP_169183.1;Parent=gene114;Note=catalyzes the transfer of phosphate between the C1 and C5 carbons of pentose;Dbxref=GOA:Q5NIF9,InterPro:IPR013553,UniProtKB%2FTrEMBL:Q5NIF9,Genbank:YP_169183.1,GeneID:3191513;gbkey=CDS;product=phosphopentomutase;protein_id=YP_169183.1;transl_table=11
NC_006570.2	RefSeq	gene	123024	123785	.	+	.	ID=gene115;Name=deoC;Dbxref=GeneID:3191515;gbkey=Gene;gene=deoC;locus_tag=FTT_0114
NC_006570.2	RefSeq	CDS	123024	123785	.	+	0	ID=cds100;Name=YP_169184.1;Parent=gene115;Note=Similar to AAP95774 %28Q7VMS9%29 Deoxyribose-phosphate aldolase from Haemophilus ducreyi %28258 aa%29. FASTA: opt: 632 Z-score: 764.1 E%28%29: 1.1e-34 Smith-Waterman score: 632%3B 42.857 identity in 245 aa overlap;Dbxref=GOA:Q5NIF8,InterPro:IPR013785,UniProtKB%2FTrEMBL:Q5NIF8,Genbank:YP_169184.1,GeneID:3191515;gbkey=CDS;product=deoxyribose-phosphate aldolase;protein_id=YP_169184.1;transl_table=11
NC_006570.2	RefSeq	gene	123775	124974	.	+	.	ID=gene116;Name=nupC1;Dbxref=GeneID:3191032;gbkey=Gene;gene=nupC1;locus_tag=FTT_0115
NC_006570.2	RefSeq	CDS	123775	124974	.	+	0	ID=cds101;Name=YP_169185.1;Parent=gene116;Note=Similar to AAP07626 %28Q81I17%29 Nucleoside permease nupC from Bacillus cereus %28392 aa%29. FASTA: opt: 1236 Z-score: 1430.7 E%28%29: 7.7e-72 Smith-Waterman score: 1236%3B 49.246 identity in 398 aa overlap Paralog of FTT0116;Dbxref=GOA:Q5NIF7,InterPro:IPR011657,UniProtKB%2FTrEMBL:Q5NIF7,Genbank:YP_169185.1,GeneID:3191032;gbkey=CDS;product=nucleoside permease NUP family protein;protein_id=YP_169185.1;transl_table=11
NC_006570.2	RefSeq	gene	124993	126195	.	+	.	ID=gene117;Name=nupC1;Dbxref=GeneID:3191029;gbkey=Gene;gene=nupC1;locus_tag=FTT_0116
NC_006570.2	RefSeq	CDS	124993	126195	.	+	0	ID=cds102;Name=YP_169186.1;Parent=gene117;Note=Similar to %28AAP07626%29 Q81I17 Nucleoside permease nupC from Bacillus cereus %28392 aa%29. FASTA: opt: 1351 Z-score: 1549.9 E%28%29: 1.9e-78 Smith-Waterman score: 1351%3B 52.381 identity in 399 aa overlap Paralog of FTT0115;Dbxref=GOA:Q5NIF6,InterPro:IPR011657,UniProtKB%2FTrEMBL:Q5NIF6,Genbank:YP_169186.1,GeneID:3191029;gbkey=CDS;product=nucleoside permease NUP family protein;protein_id=YP_169186.1;transl_table=11
NC_006570.2	RefSeq	gene	126208	126837	.	+	.	ID=gene118;Name=tmk;Dbxref=GeneID:3190791;gbkey=Gene;gene=tmk;locus_tag=FTT_0117
NC_006570.2	RefSeq	CDS	126208	126837	.	+	0	ID=cds103;Name=YP_169187.1;Parent=gene118;Note=catalyzes the reversible phosphoryl transfer from adenosine triphosphate %28ATP%29 to thymidine monophosphate %28dTMP%29 to form thymidine diphosphate %28dTDP%29;Dbxref=GOA:Q5NIF5,InterPro:IPR018095,UniProtKB%2FSwiss-Prot:Q5NIF5,Genbank:YP_169187.1,GeneID:3190791;gbkey=CDS;product=thymidylate kinase;protein_id=YP_169187.1;transl_table=11
NC_006570.2	RefSeq	gene	126899	128476	.	+	.	ID=gene119;Name=prfC;Dbxref=GeneID:3191238;gbkey=Gene;gene=prfC;locus_tag=FTT_0118
NC_006570.2	RefSeq	CDS	126899	128476	.	+	0	ID=cds104;Name=YP_169188.1;Parent=gene119;Note=stimulates the release of release factors 1 and 2 from the ribosome after hydrolysis of the ester bond in peptidyl-tRNA has occurred%3B GDP%2FGTP-binding protein;Dbxref=GOA:Q5NIF4,InterPro:IPR005225,UniProtKB%2FSwiss-Prot:Q5NIF4,Genbank:YP_169188.1,GeneID:3191238;gbkey=CDS;product=peptide chain release factor 3;protein_id=YP_169188.1;transl_table=11
NC_006570.2	RefSeq	gene	128551	129867	.	+	.	ID=gene120;Name=FTT_0119;Dbxref=GeneID:3190765;gbkey=Gene;locus_tag=FTT_0119
NC_006570.2	RefSeq	CDS	128551	129867	.	+	0	ID=cds105;Name=YP_169189.1;Parent=gene120;Note=ORF ftt0119;Dbxref=GOA:Q5NIF3,InterPro:IPR018392,UniProtKB%2FTrEMBL:Q5NIF3,Genbank:YP_169189.1,GeneID:3190765;gbkey=CDS;product=hypothetical protein;protein_id=YP_169189.1;transl_table=11
NC_006570.2	RefSeq	gene	129864	130895	.	+	.	ID=gene121;Name=ftsY;Dbxref=GeneID:3191702;gbkey=Gene;gene=ftsY;locus_tag=FTT_0120
NC_006570.2	RefSeq	CDS	129864	130895	.	+	0	ID=cds106;Name=YP_169190.1;Parent=gene121;Note=Similar to Q9I6C1 Signal recognition particle receptor FtsY from Pseudomonas aeruginosa %28455 aa%29. FASTA: opt: 1262 Z-score: 1403.4 E%28%29: 2.8e-70 Smith-Waterman score: 1262%3B 61.935identity in 310 aa overlap;Dbxref=GOA:Q5NIF2,InterPro:IPR013822,UniProtKB%2FTrEMBL:Q5NIF2,Genbank:YP_169190.1,GeneID:3191702;gbkey=CDS;product=signal recognition particle receptor FtsY;protein_id=YP_169190.1;transl_table=11
NC_006570.2	RefSeq	gene	130986	133208	.	+	.	ID=gene122;Name=uvrD;Dbxref=GeneID:3191925;gbkey=Gene;gene=uvrD;locus_tag=FTT_0121
NC_006570.2	RefSeq	CDS	130986	133208	.	+	0	ID=cds107;Name=YP_169191.1;Parent=gene122;Note=Similar to Q88C31 DNA helicase II from Pseudomonas putida %28728 aa%29. FASTA: opt: 1880 Z-score: 2129.9 E%28%29: 9.6e-111 Smith-Waterman score: 2083%3B 45.867 identity in 750 aa overlap;Dbxref=GOA:Q5NIF1,InterPro:IPR014017,UniProtKB%2FTrEMBL:Q5NIF1,Genbank:YP_169191.1,GeneID:3191925;gbkey=CDS;product=DNA helicase II;protein_id=YP_169191.1;transl_table=11
NC_006570.2	RefSeq	gene	133349	134806	.	+	.	ID=gene123;Name=oppA;Dbxref=GeneID:3191150;gbkey=Gene;gene=oppA;locus_tag=FTT_0122;pseudo=true
NC_006570.2	RefSeq	region	133349	134806	.	+	.	ID=id20;Note=Similar to OPPA_HAEIN %28P71370%29 Periplasmic oligopeptide-binding protein %28precursor%29 from Haemophilus influenzae %28541 aa%29. FASTA: opt: 924 Z-score: 1112.1 E%28%29: 4.7e-54 Smith-Waterman score: 924%3B 34.490identity in 461 aa overlap oligopeptide transporter%2C subunit A%2C ABC transporter%2C periplasmic protein;Dbxref=PSEUDO:CAG44755.1,GeneID:3191150;gbkey=misc_feature
NC_006570.2	RefSeq	gene	134831	135765	.	+	.	ID=gene124;Name=oppB;Dbxref=GeneID:3191167;gbkey=Gene;gene=oppB;locus_tag=FTT_0123;pseudo=true
NC_006570.2	RefSeq	gene	135753	136626	.	+	.	ID=gene125;Name=oppC;Dbxref=GeneID:3191173;gbkey=Gene;gene=oppC;locus_tag=FTT_0124;pseudo=true
NC_006570.2	RefSeq	gene	136633	137601	.	+	.	ID=gene126;Name=oppD;Dbxref=GeneID:3191178;gbkey=Gene;gene=oppD;locus_tag=FTT_0125
NC_006570.2	RefSeq	CDS	136633	137601	.	+	0	ID=cds108;Name=YP_169192.1;Parent=gene126;Note=Similar to Q8D8A2 Oligopeptide ABC transporter%2CATP-binding protein D from Vibrio vulnificus %28324 aa%29. FASTA: opt: 1202 Z-score: 1353.8 E%28%29: 1.6e-67 Smith-Waterman score: 1202%3B 56.270 identity in 311 aa overlap;Dbxref=GOA:Q5NIF0,InterPro:IPR017871,UniProtKB%2FTrEMBL:Q5NIF0,Genbank:YP_169192.1,GeneID:3191178;gbkey=CDS;product=oligopeptide transporter%2C subunit D%2C ABC transporter ATP-binding protein;protein_id=YP_169192.1;transl_table=11
NC_006570.2	RefSeq	gene	137602	138576	.	+	.	ID=gene127;Name=oppF;Dbxref=GeneID:3191181;gbkey=Gene;gene=oppF;locus_tag=FTT_0126
NC_006570.2	RefSeq	CDS	137602	138576	.	+	0	ID=cds109;Name=YP_169193.1;Parent=gene127;Note=Similar to OPPF_HAEIN %28P45051%29 Oligopeptide transport ATP-binding oppF from Haemophilus influenzae %28332 aa%29. FASTA: opt: 1227 Z-score: 1398.5 E%28%29: 5.3e-70 Smith-Waterman score: 1227%3B 56.790 identity in 324 aa overlap;Dbxref=GOA:Q5NIE9,InterPro:IPR017871,UniProtKB%2FTrEMBL:Q5NIE9,Genbank:YP_169193.1,GeneID:3191181;gbkey=CDS;product=oligopeptide transporter%2C subunit F%2C ABC transporter ATP-binding protein;protein_id=YP_169193.1;transl_table=11
NC_006570.2	RefSeq	gene	138580	139782	.	-	.	ID=gene128;Name=FTT_0127c;Dbxref=GeneID:3190764;gbkey=Gene;locus_tag=FTT_0127c
NC_006570.2	RefSeq	CDS	138580	139782	.	-	0	ID=cds110;Name=YP_169194.1;Parent=gene128;Note=Similar to Q83CF6 Major facilitator family transporter from Coxiella burnetii %28443 aa%29. FASTA: opt: 488 Z-score: 542.0 E%28%29: 2.7e-22 Smith-Waterman score: 490%3B 27.621identity in 391 aa overlap ORF ftt0127c;Dbxref=InterPro:IPR011701,UniProtKB%2FTrEMBL:Q5NIE8,Genbank:YP_169194.1,GeneID:3190764;gbkey=CDS;product=major facilitator transporter;protein_id=YP_169194.1;transl_table=11
NC_006570.2	RefSeq	gene	139916	140497	.	+	.	ID=gene129;Name=FTT_0128;Dbxref=GeneID:3190766;gbkey=Gene;locus_tag=FTT_0128
NC_006570.2	RefSeq	CDS	139916	140497	.	+	0	ID=cds111;Name=YP_169195.1;Parent=gene129;Note=ORF ftt0128;Dbxref=UniProtKB%2FTrEMBL:Q5NIE7,Genbank:YP_169195.1,GeneID:3190766;gbkey=CDS;product=hypothetical protein;protein_id=YP_169195.1;transl_table=11
NC_006570.2	RefSeq	gene	140641	141909	.	+	.	ID=gene130;Name=FTT_0129;Dbxref=GeneID:3190769;gbkey=Gene;locus_tag=FTT_0129
NC_006570.2	RefSeq	CDS	140641	141909	.	+	0	ID=cds112;Name=YP_169196.1;Parent=gene130;Note=Similar to Q83BM0 %28Q83BM0%29 Major facilitator family transporter from Coxiella burnetii %28428 aa%29. FASTA: opt: 497 Z-score: 533.3 E%28%29: 8.2e-22 Smith-Waterman score: 529%3B 26.355 identity in 406 aa overlap ORF ftt0129;Dbxref=InterPro:IPR011701,UniProtKB%2FTrEMBL:Q5NIE6,Genbank:YP_169196.1,GeneID:3190769;gbkey=CDS;product=major facilitator transporter;protein_id=YP_169196.1;transl_table=11
NC_006570.2	RefSeq	gene	141966	143474	.	+	.	ID=gene131;Name=glpK;Dbxref=GeneID:3192359;gbkey=Gene;gene=glpK;locus_tag=FTT_0130
NC_006570.2	RefSeq	CDS	141966	143474	.	+	0	ID=cds113;Name=YP_169197.1;Parent=gene131;Note=Similar to GLPK_THETN %28Q8R8J4%29 Glycerol kinase from Thermoanaerobacter tengcongensis %28497 aa%29. FASTA: opt: 2233 Z-score: 2691.0 E%28%29: 5.3e-142 Smith-Waterman score: 2233%3B 66.333 identity in 499 aa overlap. This CDS is disrupted by the insertion of an ISFtu1 element occurring very near the C-terminal end. It is not clear whether this insertion affects the function of the protein;Dbxref=GOA:Q5NIE5,InterPro:IPR018485,UniProtKB%2FSwiss-Prot:Q5NIE5,Genbank:YP_169197.1,GeneID:3192359;gbkey=CDS;product=glycerol kinase;protein_id=YP_169197.1;transl_table=11
NC_006570.2	RefSeq	repeat_region	143468	143479	.	-	.	ID=id21;Note=ISFtu1 12bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	gene	143567	144351	.	-	.	ID=gene132;Name=isftu1;Dbxref=GeneID:3190973;gbkey=Gene;gene=isftu1;locus_tag=FTT_0131c
NC_006570.2	RefSeq	CDS	144025	144351	.	-	0	ID=cds114;Name=YP_169198.1;Parent=gene132;Note=ISFtu1. Transposase%2C member of the IS630 Tc-1 mariner family. Identical to Q93EJ6  transposase from Francisella tularensis %28118 aa%29 from aa 144-261. Identical to Q93EJ7  transposase from Francisella tularensis %28126 aa%29 from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF%27s. ORF1 %28identical to Q93EJ7%29 contains a programmed ribosomal frameshifting motif%2C 5%27-AAAAAAAG-3%27 at aa position 109 which permits frameshifting to ORF2 %28identical to Q93EJ6%29 to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family%2C and also mariner elements%2C show that this transposase shares strongly conserved residues%2C including a fully conserved dipeptide%2CAsp-Glu %28DE%29%2C and a block consisting of a fully conserved Asp and highly conserved Glu%2C separated by 34 or 35 residues %28D35E%29. The conserved dipeptide is only present if ribosomal frameshifting occurs.;Dbxref=UniProtKB%2FTrEMBL:Q5NIH2,Genbank:YP_169198.1,GeneID:3190973;gbkey=CDS;product=transposase;protein_id=YP_169198.1;transl_table=11
NC_006570.2	RefSeq	CDS	143567	144025	.	-	0	ID=cds114;Name=YP_169198.1;Parent=gene132;Note=ISFtu1. Transposase%2C member of the IS630 Tc-1 mariner family. Identical to Q93EJ6  transposase from Francisella tularensis %28118 aa%29 from aa 144-261. Identical to Q93EJ7  transposase from Francisella tularensis %28126 aa%29 from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF%27s. ORF1 %28identical to Q93EJ7%29 contains a programmed ribosomal frameshifting motif%2C 5%27-AAAAAAAG-3%27 at aa position 109 which permits frameshifting to ORF2 %28identical to Q93EJ6%29 to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family%2C and also mariner elements%2C show that this transposase shares strongly conserved residues%2C including a fully conserved dipeptide%2CAsp-Glu %28DE%29%2C and a block consisting of a fully conserved Asp and highly conserved Glu%2C separated by 34 or 35 residues %28D35E%29. The conserved dipeptide is only present if ribosomal frameshifting occurs.;Dbxref=UniProtKB%2FTrEMBL:Q5NIH2,Genbank:YP_169198.1,GeneID:3190973;gbkey=CDS;product=transposase;protein_id=YP_169198.1;transl_table=11
NC_006570.2	RefSeq	repeat_region	144372	144387	.	-	.	ID=id22;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	144388	144403	.	-	.	ID=id23;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	144404	144415	.	-	.	ID=id24;Note=ISFtu1 12bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	gene	144667	146199	.	+	.	ID=gene133;Name=glpA;Dbxref=GeneID:3191077;gbkey=Gene;gene=glpA;locus_tag=FTT_0132
NC_006570.2	RefSeq	CDS	144667	146199	.	+	0	ID=cds115;Name=YP_169199.1;Parent=gene133;Note=Similar to O51259 Glycerol-3-phosphate dehydrogenase%2C anaerobic%2C from Borrelia burgdorferii %28527 aa%29. FASTA: opt: 1330 Z-score: 1506.9 E%28%29: 4.8e-76 Smith-Waterman score: 1330%3B 43.333 identity in 510 aa overlap;Dbxref=GOA:Q5NIE3,InterPro:IPR006076,UniProtKB%2FTrEMBL:Q5NIE3,Genbank:YP_169199.1,GeneID:3191077;gbkey=CDS;product=anaerobic glycerol-3-phosphate dehydrogenase;protein_id=YP_169199.1;transl_table=11
NC_006570.2	RefSeq	gene	146209	146973	.	+	.	ID=gene134;Name=glpF;Dbxref=GeneID:3192242;gbkey=Gene;gene=glpF;locus_tag=FTT_0133
NC_006570.2	RefSeq	CDS	146209	146973	.	+	0	ID=cds116;Name=YP_169200.1;Parent=gene134;Note=Similar to CAD75967 %28Q7UMF0%29 Probable glycerol uptake facilitator protein from Rhodopirelulla baltica %28271 aa%29. FASTA: opt: 796 Z-score: 888.1 E%28%29: 1.4e-41 Smith-Waterman score: 796%3B 50.209 identity in 239 aa overlap;Dbxref=GOA:Q5NIE2,InterPro:IPR012269,UniProtKB%2FTrEMBL:Q5NIE2,Genbank:YP_169200.1,GeneID:3192242;gbkey=CDS;product=glycerol uptake facilitator protein;protein_id=YP_169200.1;transl_table=11
NC_006570.2	RefSeq	gene	146977	147690	.	+	.	ID=gene135;Name=FTT_0134;Dbxref=GeneID:3190771;gbkey=Gene;locus_tag=FTT_0134
NC_006570.2	RefSeq	CDS	146977	147690	.	+	0	ID=cds117;Name=YP_169201.1;Parent=gene135;Note=ORF ftt0134;Dbxref=UniProtKB%2FTrEMBL:Q5NIE1,Genbank:YP_169201.1,GeneID:3190771;gbkey=CDS;product=hypothetical protein;protein_id=YP_169201.1;transl_table=11
NC_006570.2	RefSeq	gene	147668	148165	.	+	.	ID=gene136;Name=FTT_0135;Dbxref=GeneID:3190772;gbkey=Gene;locus_tag=FTT_0135;pseudo=true
NC_006570.2	RefSeq	gene	148165	149580	.	+	.	ID=gene137;Name=FTT_0136;Dbxref=GeneID:3190774;gbkey=Gene;locus_tag=FTT_0136
NC_006570.2	RefSeq	CDS	148165	149580	.	+	0	ID=cds118;Name=YP_169202.1;Parent=gene137;Note=Similar to AAQ00172 %28Q7VBG7%29 DNA helicase related to phage enzyme from Prochlorococcus marinus %28479 aa%29 FASTA: opt: 386 Z-score: 446.1 E%28%29: 5.9e-17 Smith-Waterman score: 386%3B 26.681 identity in 476 aa overlap ORF ftt0136;Dbxref=GOA:Q5NIE0,UniProtKB%2FTrEMBL:Q5NIE0,Genbank:YP_169202.1,GeneID:3190774;gbkey=CDS;product=helicase;protein_id=YP_169202.1;transl_table=11
NC_006570.2	RefSeq	gene	149738	149819	.	+	.	ID=gene138;Name=tRNA-Tyr %28GTA%29;Dbxref=GeneID:3192278;description=tRNA-Tyr %28GTA%29;gbkey=Gene;gene=tRNA-Tyr %28GTA%29;locus_tag=FTT_t03
NC_006570.2	RefSeq	tRNA	149738	149819	.	+	.	ID=rna2;Dbxref=GeneID:3192278;codons=9;gbkey=tRNA;product=tRNA-Tyr
NC_006570.2	RefSeq	exon	149738	149819	.	+	.	ID=id25;Parent=rna2;Dbxref=GeneID:3192278;codons=9;gbkey=tRNA;product=tRNA-Tyr
NC_006570.2	RefSeq	gene	149824	149894	.	+	.	ID=gene139;Name=tRNA-Gly %28TCC%29;Dbxref=GeneID:3192225;description=tRNA-Gly %28TCC%29;gbkey=Gene;gene=tRNA-Gly %28TCC%29;locus_tag=FTT_t04
NC_006570.2	RefSeq	tRNA	149824	149894	.	+	.	ID=rna3;Dbxref=GeneID:3192225;codons=62;gbkey=tRNA;product=tRNA-Gly
NC_006570.2	RefSeq	exon	149824	149894	.	+	.	ID=id26;Parent=rna3;Dbxref=GeneID:3192225;codons=62;gbkey=tRNA;product=tRNA-Gly
NC_006570.2	RefSeq	gene	149926	149998	.	+	.	ID=gene140;Name=tRNA-Thr %28GGT%29;Dbxref=GeneID:3192279;description=tRNA-Thr %28GGT%29;gbkey=Gene;gene=tRNA-Thr %28GGT%29;locus_tag=FTT_t05
NC_006570.2	RefSeq	tRNA	149926	149998	.	+	.	ID=rna4;Dbxref=GeneID:3192279;codons=37;gbkey=tRNA;product=tRNA-Thr
NC_006570.2	RefSeq	exon	149926	149998	.	+	.	ID=id27;Parent=rna4;Dbxref=GeneID:3192279;codons=37;gbkey=tRNA;product=tRNA-Thr
NC_006570.2	RefSeq	gene	150045	151229	.	+	.	ID=gene141;Name=tufA;Dbxref=GeneID:3190712;gbkey=Gene;gene=tufA;locus_tag=FTT_0137
NC_006570.2	RefSeq	CDS	150045	151229	.	+	0	ID=cds119;Name=YP_169203.1;Parent=gene141;Note=EF-Tu%3B promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis%3B when the tRNA anticodon matches the mRNA codon%2C GTP hydrolysis results%3B the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts%3B many prokaryotes have two copies of the gene encoding EF-Tu;Dbxref=GOA:Q5NID9,InterPro:IPR005225,UniProtKB%2FSwiss-Prot:Q5NID9,Genbank:YP_169203.1,GeneID:3190712;gbkey=CDS;product=elongation factor Tu;protein_id=YP_169203.1;transl_table=11
NC_006570.2	RefSeq	gene	151250	151325	.	+	.	ID=gene142;Name=tRNA-Trp %28CCA%29;Dbxref=GeneID:3192285;description=tRNA-Trp %28CCA%29;gbkey=Gene;gene=tRNA-Trp %28CCA%29;locus_tag=FTT_t06
NC_006570.2	RefSeq	tRNA	151250	151325	.	+	.	ID=rna5;Dbxref=GeneID:3192285;codons=15;gbkey=tRNA;product=tRNA-Trp
NC_006570.2	RefSeq	exon	151250	151325	.	+	.	ID=id28;Parent=rna5;Dbxref=GeneID:3192285;codons=15;gbkey=tRNA;product=tRNA-Trp
NC_006570.2	RefSeq	gene	151421	151891	.	+	.	ID=gene143;Name=secE;Dbxref=GeneID:3191695;gbkey=Gene;gene=secE;locus_tag=FTT_0138
NC_006570.2	RefSeq	CDS	151421	151891	.	+	0	ID=cds120;Name=YP_169204.1;Parent=gene143;Note=forms a complex with SecY and SecG%3B SecYEG forms a  protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane%2C a process driven by ATP and a proton-motive force;Dbxref=GOA:Q5NID8,InterPro:IPR005807,UniProtKB%2FTrEMBL:Q5NID8,Genbank:YP_169204.1,GeneID:3191695;gbkey=CDS;product=preprotein translocase subunit SecE;protein_id=YP_169204.1;transl_table=11
NC_006570.2	RefSeq	gene	151907	152440	.	+	.	ID=gene144;Name=nusG;Dbxref=GeneID:3191046;gbkey=Gene;gene=nusG;locus_tag=FTT_0139
NC_006570.2	RefSeq	CDS	151907	152440	.	+	0	ID=cds121;Name=YP_169205.1;Parent=gene144;Note=Similar to NUSG_VIBVU %28Q8DD25%29 Transcription antitermination protein nusG from Vibrio vulnificus %28181 aa%29. FASTA: opt: 687 Z-score: 868.9 E%28%29: 1.7e-40 Smith-Waterman score: 687%3B 58.621 identity in 174 aa overlap;Dbxref=GOA:Q5NID7,InterPro:IPR015869,UniProtKB%2FTrEMBL:Q5NID7,Genbank:YP_169205.1,GeneID:3191046;gbkey=CDS;product=transcription antitermination protein nusG;protein_id=YP_169205.1;transl_table=11
NC_006570.2	RefSeq	gene	152509	152943	.	+	.	ID=gene145;Name=rplK;Dbxref=GeneID:3192014;gbkey=Gene;gene=rplK;locus_tag=FTT_0140
NC_006570.2	RefSeq	CDS	152509	152943	.	+	0	ID=cds122;Name=YP_169206.1;Parent=gene145;Note=binds directly to 23S ribosomal RNA;Dbxref=GOA:Q5NID6,InterPro:IPR006519,UniProtKB%2FSwiss-Prot:Q5NID6,Genbank:YP_169206.1,GeneID:3192014;gbkey=CDS;product=50S ribosomal protein L11;protein_id=YP_169206.1;transl_table=11
NC_006570.2	RefSeq	gene	152946	153641	.	+	.	ID=gene146;Name=rplA;Dbxref=GeneID:3192023;gbkey=Gene;gene=rplA;locus_tag=FTT_0141
NC_006570.2	RefSeq	CDS	152946	153641	.	+	0	ID=cds123;Name=YP_169207.1;Parent=gene146;Note=in Escherichia coli and Methanococcus%2C this protein autoregulates expression%3B the binding site in the mRNA mimics the binding site in the 23S rRNA;Dbxref=GOA:Q5NID5,InterPro:IPR016094,UniProtKB%2FSwiss-Prot:Q5NID5,Genbank:YP_169207.1,GeneID:3192023;gbkey=CDS;product=50S ribosomal protein L1;protein_id=YP_169207.1;transl_table=11
NC_006570.2	RefSeq	gene	153811	154329	.	+	.	ID=gene147;Name=rplJ;Dbxref=GeneID:3192015;gbkey=Gene;gene=rplJ;locus_tag=FTT_0142
NC_006570.2	RefSeq	CDS	153811	154329	.	+	0	ID=cds124;Name=YP_169208.1;Parent=gene147;Note=binds the two ribosomal protein L7%2FL12 dimers and anchors them to the large ribosomal subunit;Dbxref=GOA:Q5NID4,InterPro:IPR002363,UniProtKB%2FSwiss-Prot:Q5NID4,Genbank:YP_169208.1,GeneID:3192015;gbkey=CDS;product=50S ribosomal protein L10;protein_id=YP_169208.1;transl_table=11
NC_006570.2	RefSeq	gene	154392	154769	.	+	.	ID=gene148;Name=rplL;Dbxref=GeneID:3192013;gbkey=Gene;gene=rplL;locus_tag=FTT_0143
NC_006570.2	RefSeq	CDS	154392	154769	.	+	0	ID=cds125;Name=YP_169209.1;Parent=gene148;Note=present in two forms%3B L12 is normal%2C while L7 is aminoacylated at the N-terminal serine%3B the only multicopy ribosomal protein%3B 4:1 ratio of L7%2FL12 per ribosome%3B two L12 dimers bind L10%3B critically important for translation efficiency and fidelity%3B stimulates GTPase activity of translation factors;Dbxref=GOA:Q5NID3,InterPro:IPR014719,UniProtKB%2FSwiss-Prot:Q5NID3,Genbank:YP_169209.1,GeneID:3192013;gbkey=CDS;product=50S ribosomal protein L7%2FL12;protein_id=YP_169209.1;transl_table=11
NC_006570.2	RefSeq	gene	154923	158999	.	+	.	ID=gene149;Name=rpoB;Dbxref=GeneID:3191982;gbkey=Gene;gene=rpoB;locus_tag=FTT_0144
NC_006570.2	RefSeq	CDS	154923	158999	.	+	0	ID=cds126;Name=YP_169210.1;Parent=gene149;Note=DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates%3B beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme;Dbxref=GOA:Q5NID2,InterPro:IPR015712,UniProtKB%2FSwiss-Prot:Q5NID2,Genbank:YP_169210.1,GeneID:3191982;gbkey=CDS;product=DNA-directed RNA polymerase subunit beta;protein_id=YP_169210.1;transl_table=11
NC_006570.2	RefSeq	gene	159061	163314	.	+	.	ID=gene150;Name=rpoC;Dbxref=GeneID:3191980;gbkey=Gene;gene=rpoC;locus_tag=FTT_0145
NC_006570.2	RefSeq	CDS	159061	163314	.	+	0	ID=cds127;Name=YP_169211.1;Parent=gene150;Note=Similar to Q9AAU1 %28Q9AAU1%29 DNA-directed RNA polymerase%2C beta subunit from Caulobacter crescentus %281396 aa%29. FASTA: opt: 5089 Z-score: 5550.7 E%28%29: 0 Smith-Waterman score: 5089%3B 56.626identity in 1381 aa overlap;Dbxref=GOA:Q5NID1,InterPro:IPR012754,UniProtKB%2FSwiss-Prot:Q5NID1,Genbank:YP_169211.1,GeneID:3191980;gbkey=CDS;product=DNA-directed RNA polymerase subunit beta;protein_id=YP_169211.1;transl_table=11
NC_006570.2	RefSeq	gene	163417	163653	.	+	.	ID=gene151;Name=FTT_0146;Dbxref=GeneID:3190778;gbkey=Gene;locus_tag=FTT_0146
NC_006570.2	RefSeq	CDS	163417	163653	.	+	0	ID=cds128;Name=YP_169212.1;Parent=gene151;Note=ORF ftt0146;Dbxref=UniProtKB%2FTrEMBL:Q5NID0,Genbank:YP_169212.1,GeneID:3190778;gbkey=CDS;product=hypothetical protein;protein_id=YP_169212.1;transl_table=11
NC_006570.2	RefSeq	gene	163653	164663	.	+	.	ID=gene152;Name=gcp;Dbxref=GeneID:3192378;gbkey=Gene;gene=gcp;locus_tag=FTT_0147
NC_006570.2	RefSeq	CDS	163653	164663	.	+	0	ID=cds129;Name=YP_169213.1;Parent=gene152;Note=in most organisms%2C only the N-terminal domain is present in a single polypeptide%3B in some archaea this domain is fused to a kinase domain%3B this gene is essential for growth in Escherichia coli and Bacillus subtilis%3B the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins%3B the Pyrococcus structure shows DNA-binding properties%2C iron-binding%2C ATP-binding%2C and AP endonuclease activity;Dbxref=GOA:Q5NIC9,InterPro:IPR017861,UniProtKB%2FSwiss-Prot:Q5NIC9,Genbank:YP_169213.1,GeneID:3192378;gbkey=CDS;product=DNA-binding%2Firon metalloprotein%2FAP endonuclease;protein_id=YP_169213.1;transl_table=11
NC_006570.2	RefSeq	gene	164777	165943	.	+	.	ID=gene153;Name=FTT_0148;Dbxref=GeneID:3190777;gbkey=Gene;locus_tag=FTT_0148
NC_006570.2	RefSeq	CDS	164777	165943	.	+	0	ID=cds130;Name=YP_169214.1;Parent=gene153;Note=Similar to Q27437 Stearoyl-CoA desaturase from Amblyomma americanum %28317 aa%29. FASTA: opt: 653 Z-score: 747.5 E%28%29: 9.6e-34 Smith-Waterman score: 653%3B 36.897 identity in 290 aa overlap ORF ftt0148;Dbxref=GOA:Q5NIC8,InterPro:IPR015876,UniProtKB%2FTrEMBL:Q5NIC8,Genbank:YP_169214.1,GeneID:3190777;gbkey=CDS;product=fatty acid desaturase;protein_id=YP_169214.1;transl_table=11
NC_006570.2	RefSeq	gene	166155	167315	.	-	.	ID=gene154;Name=metK;Dbxref=GeneID:3190826;gbkey=Gene;gene=metK;locus_tag=FTT_0149c
NC_006570.2	RefSeq	CDS	166155	167315	.	-	0	ID=cds131;Name=YP_169215.1;Parent=gene154;Note=catalyzes the formation of S-adenosylmethionine from methionine and ATP%3B methionine adenosyltransferase;Dbxref=GOA:Q5NIC7,InterPro:IPR002133,UniProtKB%2FSwiss-Prot:Q5NIC7,Genbank:YP_169215.1,GeneID:3190826;gbkey=CDS;product=S-adenosylmethionine synthetase;protein_id=YP_169215.1;transl_table=11
NC_006570.2	RefSeq	gene	167609	167857	.	+	.	ID=gene155;Name=rpsP;Dbxref=GeneID:3192515;gbkey=Gene;gene=rpsP;locus_tag=FTT_0150
NC_006570.2	RefSeq	CDS	167609	167857	.	+	0	ID=cds132;Name=YP_169216.1;Parent=gene155;Note=binds to lower part of 30S body where it stabilizes two domains%3B required for efficient assembly of 30S%3B in Escherichia coli this protein has nuclease activity;Dbxref=GOA:Q5NIC6,InterPro:IPR000307,UniProtKB%2FSwiss-Prot:Q5NIC6,Genbank:YP_169216.1,GeneID:3192515;gbkey=CDS;product=30S ribosomal protein S16;protein_id=YP_169216.1;transl_table=11
NC_006570.2	RefSeq	gene	167900	168409	.	+	.	ID=gene156;Name=rimM;Dbxref=GeneID:3191619;gbkey=Gene;gene=rimM;locus_tag=FTT_0151
NC_006570.2	RefSeq	CDS	167900	168409	.	+	0	ID=cds133;Name=YP_169217.1;Parent=gene156;Note=Essential for efficient processing of 16S rRNA;Dbxref=GOA:Q5NIC5,InterPro:IPR011961,UniProtKB%2FSwiss-Prot:Q5NIC5,Genbank:YP_169217.1,GeneID:3191619;gbkey=CDS;product=16S rRNA-processing protein RimM;protein_id=YP_169217.1;transl_table=11
NC_006570.2	RefSeq	gene	168806	169570	.	+	.	ID=gene157;Name=trmD;Dbxref=GeneID:3192286;gbkey=Gene;gene=trmD;locus_tag=FTT_0152
NC_006570.2	RefSeq	CDS	168806	169570	.	+	0	ID=cds134;Name=YP_169218.1;Parent=gene157;Note=methylates guanosine-37 in various tRNAs%3B uses S-adenosyl-L-methionine to transfer methyl group to tRNA;Dbxref=GOA:Q5NIC4,InterPro:IPR016009,UniProtKB%2FSwiss-Prot:Q5NIC4,Genbank:YP_169218.1,GeneID:3192286;gbkey=CDS;product=tRNA %28guanine-N%281%29-%29-methyltransferase;protein_id=YP_169218.1;transl_table=11
NC_006570.2	RefSeq	gene	169570	169917	.	+	.	ID=gene158;Name=rplS;Dbxref=GeneID:3192004;gbkey=Gene;gene=rplS;locus_tag=FTT_0153
NC_006570.2	RefSeq	CDS	169570	169917	.	+	0	ID=cds135;Name=YP_169219.1;Parent=gene158;Note=this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site;Dbxref=GOA:Q5NIC3,InterPro:IPR018257,UniProtKB%2FSwiss-Prot:Q5NIC3,Genbank:YP_169219.1,GeneID:3192004;gbkey=CDS;product=50S ribosomal protein L19;protein_id=YP_169219.1;transl_table=11
NC_006570.2	RefSeq	gene	170083	170961	.	+	.	ID=gene159;Name=xerD;Dbxref=GeneID:3192118;gbkey=Gene;gene=xerD;locus_tag=FTT_0154
NC_006570.2	RefSeq	CDS	170083	170961	.	+	0	ID=cds136;Name=YP_169220.1;Parent=gene159;Note=Similar to Q7ZAJ8 %28Q7ZAJ8%29 Integrase%2Frecombinase XerD from Shewanella oneidensis %28300 aa%29. FASTA: opt: 1039 Z-score: 1285.0 E%28%29: 1.1e-63 Smith-Waterman score: 1039%3B 52.414 identity in 290 aa overlap;Dbxref=GOA:Q5NIC2,InterPro:IPR013762,UniProtKB%2FTrEMBL:Q5NIC2,Genbank:YP_169220.1,GeneID:3192118;gbkey=CDS;product=integrase%2Frecombinase;protein_id=YP_169220.1;transl_table=11
NC_006570.2	RefSeq	gene	171078	171929	.	+	.	ID=gene160;Name=FTT_0155;Dbxref=GeneID:3190781;gbkey=Gene;locus_tag=FTT_0155
NC_006570.2	RefSeq	CDS	171078	171929	.	+	0	ID=cds137;Name=YP_169221.1;Parent=gene160;Note=Similar to Q87HU0  oxidoreductase iron%2Fascorbate from Vibrio parahaemolyticus %28279 aa%29. FASTA: opt: 944 Z-score: 1155.0 E%28%29: 1.9e-56 Smith-Waterman score: 944%3B 49.110 identity in 281 aa overlap ORF ftt0155;Dbxref=GOA:Q5NIC1,InterPro:IPR005123,UniProtKB%2FTrEMBL:Q5NIC1,Genbank:YP_169221.1,GeneID:3190781;gbkey=CDS;product=oxidoreductase iron%2Fascorbate family protein;protein_id=YP_169221.1;transl_table=11
NC_006570.2	RefSeq	gene	171934	172518	.	+	.	ID=gene161;Name=FTT_0156;Dbxref=GeneID:3190784;gbkey=Gene;locus_tag=FTT_0156
NC_006570.2	RefSeq	CDS	171934	172518	.	+	0	ID=cds138;Name=YP_169222.1;Parent=gene161;Note=Similar to Q83EI5 Acid phosphatase%2C class B from Coxiella burnetti %28221 aa%29. FASTA: opt: 326 Z-score: 430.9 E%28%29: 4.1e-16 Smith-Waterman score: 326%3B 32.642identity in 193 aa overlap ORF ftt0156;Dbxref=GOA:Q5NIC0,InterPro:IPR005519,UniProtKB%2FTrEMBL:Q5NIC0,Genbank:YP_169222.1,GeneID:3190784;gbkey=CDS;product=acid phosphatase;protein_id=YP_169222.1;transl_table=11
NC_006570.2	RefSeq	gene	172515	173399	.	-	.	ID=gene162;Name=FTT_0157c;Dbxref=GeneID:3190874;gbkey=Gene;locus_tag=FTT_0157c
NC_006570.2	RefSeq	CDS	172515	173399	.	-	0	ID=cds139;Name=YP_169223.1;Parent=gene162;Note=Similar to Q8XMR0 Probable lic-1 operon protein from Clostridium perfringens %28322 aa%29. FASTA: opt: 370 Z-score: 410.4 E%28%29: 5.7e-15 Smith-Waterman score: 396%3B 30.492 identity in 305 aa overlap ORF ftt0157c;Dbxref=GOA:Q5NIB9,InterPro:IPR000620,UniProtKB%2FTrEMBL:Q5NIB9,Genbank:YP_169223.1,GeneID:3190874;gbkey=CDS;product=licB-like transmembrane protein;protein_id=YP_169223.1;transl_table=11
NC_006570.2	RefSeq	gene	173531	174139	.	-	.	ID=gene163;Name=FTT_0158c;Dbxref=GeneID:3192337;gbkey=Gene;locus_tag=FTT_0158c
NC_006570.2	RefSeq	CDS	173531	174139	.	-	0	ID=cds140;Name=YP_169224.1;Parent=gene163;Note=ORF ftt0158c;Dbxref=UniProtKB%2FTrEMBL:Q5NIB8,Genbank:YP_169224.1,GeneID:3192337;gbkey=CDS;product=hypothetical protein;protein_id=YP_169224.1;transl_table=11
NC_006570.2	RefSeq	gene	174216	175037	.	-	.	ID=gene164;Name=FTT_0159c;Dbxref=GeneID:3190819;gbkey=Gene;locus_tag=FTT_0159c
NC_006570.2	RefSeq	CDS	174216	175037	.	-	0	ID=cds141;Name=YP_169225.1;Parent=gene164;Note=ORF ftt0159c;Dbxref=UniProtKB%2FTrEMBL:Q5NIB7,Genbank:YP_169225.1,GeneID:3190819;gbkey=CDS;product=hypothetical protein;protein_id=YP_169225.1;transl_table=11
NC_006570.2	RefSeq	gene	175200	175667	.	+	.	ID=gene165;Name=nudH;Dbxref=GeneID:3191741;gbkey=Gene;gene=nudH;locus_tag=FTT_0160
NC_006570.2	RefSeq	CDS	175200	175667	.	+	0	ID=cds142;Name=YP_169226.1;Parent=gene165;Note=hydrolyzes diadenosine polyphosphate;Dbxref=GOA:Q5NIB6,InterPro:IPR000086,UniProtKB%2FSwiss-Prot:Q5NIB6,Genbank:YP_169226.1,GeneID:3191741;gbkey=CDS;product=dinucleoside polyphosphate hydrolase;protein_id=YP_169226.1;transl_table=11
NC_006570.2	RefSeq	gene	175677	176303	.	-	.	ID=gene166;Name=FTT_0161c;Dbxref=GeneID:3192299;gbkey=Gene;locus_tag=FTT_0161c
NC_006570.2	RefSeq	CDS	175677	176303	.	-	0	ID=cds143;Name=YP_169227.1;Parent=gene166;Note=Similar to Q8FXE8 PAP2 family protein from Brucella suis %28325 aa%29. FASTA: opt: 314 Z-score: 375.8 E%28%29: 4.8e-13 Smith-Waterman score: 314%3B 31.915identity in 188 aa overlap ORF ftt0161c;Dbxref=GOA:Q5NIB5,InterPro:IPR016118,UniProtKB%2FTrEMBL:Q5NIB5,Genbank:YP_169227.1,GeneID:3192299;gbkey=CDS;product=PAP2 family protein;protein_id=YP_169227.1;transl_table=11
NC_006570.2	RefSeq	gene	176377	176901	.	+	.	ID=gene167;Name=ampD;Dbxref=GeneID:3192487;gbkey=Gene;gene=ampD;locus_tag=FTT_0162
NC_006570.2	RefSeq	CDS	176377	176901	.	+	0	ID=cds144;Name=YP_169228.1;Parent=gene167;Note=Similar to Q88PQ9 N-acetyl-anhydromuramyl-L-alanine amidase ampD from Pseudomonas putida %28190 aa%29. FASTA: opt: 623 Z-score: 809.4 E%28%29: 3.4e-37 Smith-Waterman score: 623%3B 52.000 identity in 175 aa overlap;Dbxref=GOA:Q5NIB4,InterPro:IPR015510,UniProtKB%2FTrEMBL:Q5NIB4,Genbank:YP_169228.1,GeneID:3192487;gbkey=CDS;product=N-acetyl-anhydromuranmyl-L-alanine amidase;protein_id=YP_169228.1;transl_table=11
NC_006570.2	RefSeq	gene	176959	178842	.	-	.	ID=gene168;Name=parE;Dbxref=GeneID:3191416;gbkey=Gene;gene=parE;locus_tag=FTT_0163c
NC_006570.2	RefSeq	CDS	176959	178842	.	-	0	ID=cds145;Name=YP_169229.1;Parent=gene168;Note=decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling;Dbxref=GOA:Q5NIB3,InterPro:IPR018522,UniProtKB%2FTrEMBL:Q5NIB3,Genbank:YP_169229.1,GeneID:3191416;gbkey=CDS;product=DNA topoisomerase IV subunit B;protein_id=YP_169229.1;transl_table=11
NC_006570.2	RefSeq	gene	178932	180113	.	-	.	ID=gene169;Name=FTT_0164c;Dbxref=GeneID:3192407;gbkey=Gene;locus_tag=FTT_0164c
NC_006570.2	RefSeq	CDS	178932	180113	.	-	0	ID=cds146;Name=YP_169230.1;Parent=gene169;Note=Similar to Q9KRK6 Multidrug resistance protein from Vibrio cholerae %28401 aa%29. FASTA: opt: 579 Z-score: 614.0 E%28%29: 2.6e-26 Smith-Waterman score: 579%3B 28.989identity in 376 aa overlap ORF ftt0164c;Dbxref=GOA:Q5NIB2,InterPro:IPR011701,UniProtKB%2FTrEMBL:Q5NIB2,Genbank:YP_169230.1,GeneID:3192407;gbkey=CDS;product=eflux protein;protein_id=YP_169230.1;transl_table=11
NC_006570.2	RefSeq	gene	180113	181483	.	-	.	ID=gene170;Name=FTT_0165c;Dbxref=GeneID:3192524;gbkey=Gene;locus_tag=FTT_0165c
NC_006570.2	RefSeq	CDS	180113	181483	.	-	0	ID=cds147;Name=YP_169231.1;Parent=gene170;Note=Similar to Q88PJ4 Conserved hypothetical protein from Pseudomonas putida %28380 aa%29. FASTA: opt: 644 Z-score: 755.3 E%28%29: 3.5e-34 Smith-Waterman score: 646%3B 29.268 identity in 369 aa overlap ORF ftt0165c;Dbxref=InterPro:IPR018391,UniProtKB%2FTrEMBL:Q5NIB1,Genbank:YP_169231.1,GeneID:3192524;gbkey=CDS;product=lipoprotein;protein_id=YP_169231.1;transl_table=11
NC_006570.2	RefSeq	gene	181486	182142	.	-	.	ID=gene171;Name=FTT_0166c;Dbxref=GeneID:3192512;gbkey=Gene;locus_tag=FTT_0166c
NC_006570.2	RefSeq	CDS	181486	182142	.	-	0	ID=cds148;Name=YP_169232.1;Parent=gene171;Note=Similar to Q8FF57 Hypothetical protein yfgM from E. coli %28206 aa%29. FASTA: opt: 155 Z-score: 188.7 E%28%29: 0.012 Smith-Waterman score: 188%3B 27.778 identity in 198 aa overlap ORF ftt0166c;Dbxref=GOA:Q5NIB0,InterPro:IPR011990,UniProtKB%2FTrEMBL:Q5NIB0,Genbank:YP_169232.1,GeneID:3192512;gbkey=CDS;product=hypothetical protein;protein_id=YP_169232.1;transl_table=11
NC_006570.2	RefSeq	gene	182323	183573	.	+	.	ID=gene172;Name=hemA;Dbxref=GeneID:3192414;gbkey=Gene;gene=hemA;locus_tag=FTT_0167
NC_006570.2	RefSeq	CDS	182323	183573	.	+	0	ID=cds149;Name=YP_169233.1;Parent=gene172;Note=catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA%28Glu%29 and NADPH%3B the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid%3B functions in porphyrin %28tetrapyrroles%29 biosynthesis%3B the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins;Dbxref=GOA:Q5NIA9,InterPro:IPR018214,UniProtKB%2FSwiss-Prot:Q5NIA9,Genbank:YP_169233.1,GeneID:3192414;gbkey=CDS;product=glutamyl-tRNA reductase;protein_id=YP_169233.1;transl_table=11
NC_006570.2	RefSeq	gene	183574	184659	.	+	.	ID=gene173;Name=prfA;Dbxref=GeneID:3191241;gbkey=Gene;gene=prfA;locus_tag=FTT_0168
NC_006570.2	RefSeq	CDS	183574	184659	.	+	0	ID=cds150;Name=YP_169234.1;Parent=gene173;Note=recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1%3B this protein is similar to release factor 2;Dbxref=GOA:Q5NIA8,InterPro:IPR005139,UniProtKB%2FSwiss-Prot:Q5NIA8,Genbank:YP_169234.1,GeneID:3191241;gbkey=CDS;product=peptide chain release factor 1;protein_id=YP_169234.1;transl_table=11
NC_006570.2	RefSeq	gene	184652	185506	.	+	.	ID=gene174;Name=FTT_0169;Dbxref=GeneID:3191135;gbkey=Gene;locus_tag=FTT_0169
NC_006570.2	RefSeq	CDS	184652	185506	.	+	0	ID=cds151;Name=YP_169235.1;Parent=gene174;Note=ORF ftt0169;Dbxref=GOA:Q5NIA7,InterPro:IPR017759,UniProtKB%2FTrEMBL:Q5NIA7,Genbank:YP_169235.1,GeneID:3191135;gbkey=CDS;product=hemK protein;protein_id=YP_169235.1;transl_table=11
NC_006570.2	RefSeq	gene	185497	185925	.	-	.	ID=gene175;Name=FTT_0170c;Dbxref=GeneID:3191134;gbkey=Gene;locus_tag=FTT_0170c;pseudo=true
NC_006570.2	RefSeq	repeat_region	185927	185938	.	+	.	ID=id29;Note=ISFtu1 12bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	185939	185954	.	+	.	ID=id30;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	185955	185970	.	+	.	ID=id31;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;gbkey=repeat_region
NC_006570.2	RefSeq	gene	185991	186775	.	+	.	ID=gene176;Name=isftu1;Dbxref=GeneID:3190954;gbkey=Gene;gene=isftu1;locus_tag=FTT_0171
NC_006570.2	RefSeq	CDS	185991	186317	.	+	0	ID=cds152;Name=YP_169236.1;Parent=gene176;Note=ISFtu1. Transposase%2C member of the IS630 Tc-1 mariner family. Identical to Q93EJ6  transposase from Francisella tularensis %28118 aa%29 from aa 144-261. Identical to Q93EJ7  transposase from Francisella tularensis %28126 aa%29 from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF%27s. ORF1 %28identical to Q93EJ7%29 contains a programmed ribosomal frameshifting motif%2C 5%27-AAAAAAAG-3%27 at aa position 109 which permits frameshifting to ORF2 %28identical to Q93EJ6%29 to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family%2C and also mariner elements%2C show that this transposase shares strongly conserved residues%2C including a fully conserved dipeptide%2CAsp-Glu %28DE%29%2C and a block consisting of a fully conserved Asp and highly conserved Glu%2C separated by 34 or 35 residues %28D35E%29. The conserved dipeptide is only present if ribosomal frameshifting occurs.;Dbxref=UniProtKB%2FTrEMBL:Q5NIH2,Genbank:YP_169236.1,GeneID:3190954;gbkey=CDS;product=transposase;protein_id=YP_169236.1;transl_table=11
NC_006570.2	RefSeq	CDS	186317	186775	.	+	0	ID=cds152;Name=YP_169236.1;Parent=gene176;Note=ISFtu1. Transposase%2C member of the IS630 Tc-1 mariner family. Identical to Q93EJ6  transposase from Francisella tularensis %28118 aa%29 from aa 144-261. Identical to Q93EJ7  transposase from Francisella tularensis %28126 aa%29 from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF%27s. ORF1 %28identical to Q93EJ7%29 contains a programmed ribosomal frameshifting motif%2C 5%27-AAAAAAAG-3%27 at aa position 109 which permits frameshifting to ORF2 %28identical to Q93EJ6%29 to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family%2C and also mariner elements%2C show that this transposase shares strongly conserved residues%2C including a fully conserved dipeptide%2CAsp-Glu %28DE%29%2C and a block consisting of a fully conserved Asp and highly conserved Glu%2C separated by 34 or 35 residues %28D35E%29. The conserved dipeptide is only present if ribosomal frameshifting occurs.;Dbxref=UniProtKB%2FTrEMBL:Q5NIH2,Genbank:YP_169236.1,GeneID:3190954;gbkey=CDS;product=transposase;protein_id=YP_169236.1;transl_table=11
NC_006570.2	RefSeq	repeat_region	186863	186874	.	+	.	ID=id32;Note=ISFtu1 12bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	gene	186876	187226	.	+	.	ID=gene177;Name=FTT_0172;Dbxref=GeneID:3191132;gbkey=Gene;locus_tag=FTT_0172;pseudo=true
NC_006570.2	RefSeq	gene	187296	188197	.	+	.	ID=gene178;Name=FTT_0173;Dbxref=GeneID:3191131;gbkey=Gene;locus_tag=FTT_0173;pseudo=true
NC_006570.2	RefSeq	gene	188216	188785	.	+	.	ID=gene179;Name=FTT_0174;Dbxref=GeneID:3191454;gbkey=Gene;locus_tag=FTT_0174
NC_006570.2	RefSeq	CDS	188216	188785	.	+	0	ID=cds153;Name=YP_169237.1;Parent=gene179;Note=Similar to Q83A22 Hypothetical protein from Coxiella burnetti %28192 aa%29. FASTA: opt: 440 Z-score: 543.8 E%28%29: 2.1e-22 Smith-Waterman score: 440%3B 37.634 identity in 186 aa overlap ORF ftt0174;Dbxref=GOA:Q5NIA5,InterPro:IPR003425,UniProtKB%2FTrEMBL:Q5NIA5,Genbank:YP_169237.1,GeneID:3191454;gbkey=CDS;product=hypothetical protein;protein_id=YP_169237.1;transl_table=11
NC_006570.2	RefSeq	gene	188779	189561	.	-	.	ID=gene180;Name=FTT_0175c;Dbxref=GeneID:3191373;gbkey=Gene;locus_tag=FTT_0175c
NC_006570.2	RefSeq	CDS	188779	189561	.	-	0	ID=cds154;Name=YP_169238.1;Parent=gene180;Note=Similar to AAO80856 %28Q836Q5%29 ABC transporter%2C ATP-binding protein %28269 aa%29. FASTA: opt: 738 Z-score: 809.5 E%28%29: 3.1e-37 Smith-Waterman score: 738%3B 43.137 identity in 255 aa overlap missing 90 aa at C-terminus ORF ftt0175c;Dbxref=GOA:Q5NIA4,InterPro:IPR017871,UniProtKB%2FTrEMBL:Q5NIA4,Genbank:YP_169238.1,GeneID:3191373;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=YP_169238.1;transl_table=11
NC_006570.2	RefSeq	gene	189593	191343	.	-	.	ID=gene181;Name=FTT_0176c;Dbxref=GeneID:3191371;gbkey=Gene;locus_tag=FTT_0176c;pseudo=true
NC_006570.2	RefSeq	gene	191745	192170	.	-	.	ID=gene182;Name=FTT_0177c;Dbxref=GeneID:3191370;gbkey=Gene;locus_tag=FTT_0177c
NC_006570.2	RefSeq	CDS	191745	192170	.	-	0	ID=cds155;Name=YP_169239.1;Parent=gene182;Note=Similar to Q88IP2 Acetyltransferase%2C GNAT family from Pseudomonas putida %28364 aa%29. FASTA: opt: 250 Z-score: 324.7 E%28%29: 3.1e-10 Smith-Waterman score: 250%3B 34.559 identity in 136 aa overlap ORF ftt0177c;Dbxref=GOA:Q5NIA3,InterPro:IPR016181,UniProtKB%2FTrEMBL:Q5NIA3,Genbank:YP_169239.1,GeneID:3191370;gbkey=CDS;product=acetyltransferase;protein_id=YP_169239.1;transl_table=11
NC_006570.2	RefSeq	gene	192157	193626	.	-	.	ID=gene183;Name=rimK;Dbxref=GeneID:3191620;gbkey=Gene;gene=rimK;locus_tag=FTT_0178c
NC_006570.2	RefSeq	CDS	192157	193626	.	-	0	ID=cds156;Name=YP_169240.1;Parent=gene183;Note=Similar to Q9KPN3 Ribosomal protein S6 modification protein-related protein from Vibrio cholerae %28483 aa%29. FASTA: opt: 1367 Z-score: 1648.7 E%28%29: 6.1e-84 Smith-Waterman score: 1367%3B 43.149 identity in 489 aa overlap;Dbxref=GOA:Q5NIA2,InterPro:IPR018253,UniProtKB%2FTrEMBL:Q5NIA2,Genbank:YP_169240.1,GeneID:3191620;gbkey=CDS;product=30S ribosomal protein S6;protein_id=YP_169240.1;transl_table=11
NC_006570.2	RefSeq	gene	193789	195803	.	+	.	ID=gene184;Name=FTT_0179;Dbxref=GeneID:3191369;gbkey=Gene;locus_tag=FTT_0179;pseudo=true
NC_006570.2	RefSeq	gene	195907	196797	.	+	.	ID=gene185;Name=FTT_0180;Dbxref=GeneID:3191367;gbkey=Gene;locus_tag=FTT_0180
NC_006570.2	RefSeq	CDS	195907	196797	.	+	0	ID=cds157;Name=YP_169241.1;Parent=gene185;Note=Similar to Q8DDF5 1-acyl-sn-glycerol-3-phosphate acyltransferase from Vibrio vulnificus %28271 aa%29. FASTA: opt: 749 Z-score: 902.5 E%28%29: 2e-42 Smith-Waterman score: 749%3B 40.370 identity in 270 aa overlap ORF ftt0180;Dbxref=GOA:Q5NIA1,InterPro:IPR002123,UniProtKB%2FTrEMBL:Q5NIA1,Genbank:YP_169241.1,GeneID:3191367;gbkey=CDS;product=acyltransferase;protein_id=YP_169241.1;transl_table=11
NC_006570.2	RefSeq	gene	197194	197730	.	-	.	ID=gene186;Name=FTT_0181c;Dbxref=GeneID:3191366;gbkey=Gene;locus_tag=FTT_0181c
NC_006570.2	RefSeq	CDS	197194	197730	.	-	0	ID=cds158;Name=YP_169242.1;Parent=gene186;Note=Similar to Q9X885  small integral membrane protein from Streptomyces coelicolor %28167 aa%29. FASTA: opt: 262 Z-score: 342.1 E%28%29: 3.6e-11 Smith-Waterman score: 262%3B 30.723 identity in 166 aa overlap ORF ftt0181c;Dbxref=UniProtKB%2FTrEMBL:Q5NIA0,Genbank:YP_169242.1,GeneID:3191366;gbkey=CDS;product=hypothetical protein;protein_id=YP_169242.1;transl_table=11
NC_006570.2	RefSeq	gene	197828	198370	.	-	.	ID=gene187;Name=FTT_0182c;Dbxref=GeneID:3191365;gbkey=Gene;locus_tag=FTT_0182c
NC_006570.2	RefSeq	CDS	197828	198370	.	-	0	ID=cds159;Name=YP_169243.1;Parent=gene187;Note=Similar to Q8D257 YrdC protein from Wigglesworthia glossinidia %28194 aa%29. FASTA: opt: 374 Z-score: 473.0 E%28%29: 1.9e-18 Smith-Waterman score: 374%3B 39.130 identity in 184 aa overlap ORF ftt0182c;Dbxref=InterPro:IPR017945,UniProtKB%2FTrEMBL:Q5NI99,Genbank:YP_169243.1,GeneID:3191365;gbkey=CDS;product=Sua5%2FYciO%2FYrdC family protein;protein_id=YP_169243.1;transl_table=11
NC_006570.2	RefSeq	gene	198487	200157	.	-	.	ID=gene188;Name=rpsA;Dbxref=GeneID:3191976;gbkey=Gene;gene=rpsA;locus_tag=FTT_0183c
NC_006570.2	RefSeq	CDS	198487	200157	.	-	0	ID=cds160;Name=YP_169244.1;Parent=gene188;Note=in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit%3B autoregulates expression via a C-terminal domain%3B in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats%3B the S1 nucleic acid-binding domain is found associated with other proteins;Dbxref=GOA:Q5NI98,InterPro:IPR018032,UniProtKB%2FTrEMBL:Q5NI98,Genbank:YP_169244.1,GeneID:3191976;gbkey=CDS;product=30S ribosomal protein S1;protein_id=YP_169244.1;transl_table=11
NC_006570.2	RefSeq	gene	200305	200766	.	+	.	ID=gene189;Name=FTT_0184;Dbxref=GeneID:3191361;gbkey=Gene;locus_tag=FTT_0184
NC_006570.2	RefSeq	CDS	200305	200766	.	+	0	ID=cds161;Name=YP_169245.1;Parent=gene189;Note=Similar to Q83DS3 Zinc-binding domain protein from Coxiella burnetii %28142 aa%29. FASTA: opt: 473 Z-score: 642.4 E%28%29: 6.8e-28 Smith-Waterman score: 473%3B 52.817 identity in 142 aa overlap ORF ftt0184;Dbxref=GOA:Q5NI97,InterPro:IPR016192,UniProtKB%2FTrEMBL:Q5NI97,Genbank:YP_169245.1,GeneID:3191361;gbkey=CDS;product=zinc-binding domain-containing protein;protein_id=YP_169245.1;transl_table=11
NC_006570.2	RefSeq	gene	200770	201660	.	+	.	ID=gene190;Name=ddlB;Dbxref=GeneID:3191505;gbkey=Gene;gene=ddlB;locus_tag=FTT_0185
NC_006570.2	RefSeq	CDS	200770	201660	.	+	0	ID=cds162;Name=YP_169246.1;Parent=gene190;Note=D-alanine--D-alanine ligase%3B DdlA%3B DdlB%3B cytoplasmic%3B catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis%3B there are two forms of this enzyme in Escherichia coli;Dbxref=GOA:Q5NI96,InterPro:IPR013817,UniProtKB%2FSwiss-Prot:Q5NI96,Genbank:YP_169246.1,GeneID:3191505;gbkey=CDS;product=D-alanyl-alanine synthetase A;protein_id=YP_169246.1;transl_table=11
NC_006570.2	RefSeq	gene	201657	202340	.	+	.	ID=gene191;Name=ftsQ;Dbxref=GeneID:3192466;gbkey=Gene;gene=ftsQ;locus_tag=FTT_0186
NC_006570.2	RefSeq	CDS	201657	202340	.	+	0	ID=cds163;Name=YP_169247.1;Parent=gene191;Note=Similar to Q83F15 Cell division protein FtsQ from Coxiella burnetii %28243 aa%29. FASTA: opt: 291 Z-score: 355.4 E%28%29: 6.6e-12 Smith-Waterman score: 291%3B 23.176 identity in 233 aa overlap;Dbxref=GOA:Q5NI95,InterPro:IPR005548,UniProtKB%2FTrEMBL:Q5NI95,Genbank:YP_169247.1,GeneID:3192466;gbkey=CDS;product=cell division protein FtsQ;protein_id=YP_169247.1;transl_table=11
NC_006570.2	RefSeq	gene	202442	203704	.	+	.	ID=gene192;Name=ftsA;Dbxref=GeneID:3191833;gbkey=Gene;gene=ftsA;locus_tag=FTT_0187
NC_006570.2	RefSeq	CDS	202442	203704	.	+	0	ID=cds164;Name=YP_169248.1;Parent=gene192;Note=Similar to Q87WY9 Cell division protein FtsA from Pseuodomonas syringae %28418 aa%29. FASTA: opt: 992 Z-score: 1194.6 E%28%29: 1.2e-58 Smith-Waterman score: 992%3B 37.621 identity in 412 aa overlap;Dbxref=GOA:Q5NI94,InterPro:IPR003494,UniProtKB%2FTrEMBL:Q5NI94,Genbank:YP_169248.1,GeneID:3191833;gbkey=CDS;product=cell division protein FtsA;protein_id=YP_169248.1;transl_table=11
NC_006570.2	RefSeq	gene	203748	204893	.	+	.	ID=gene193;Name=ftsZ;Dbxref=GeneID:3191126;gbkey=Gene;gene=ftsZ;locus_tag=FTT_0188
NC_006570.2	RefSeq	CDS	203748	204893	.	+	0	ID=cds165;Name=YP_169249.1;Parent=gene193;Note=GTPase%3B similar structure to tubulin%3B forms ring-shaped polymers at the site of cell division%3B other proteins such as FtsA%2C ZipA%2C and ZapA%2C interact with and regulate FtsZ function;Dbxref=GOA:Q5NI93,InterPro:IPR018316,UniProtKB%2FTrEMBL:Q5NI93,Genbank:YP_169249.1,GeneID:3191126;gbkey=CDS;product=cell division protein FtsZ;protein_id=YP_169249.1;transl_table=11
NC_006570.2	RefSeq	gene	204916	205776	.	+	.	ID=gene194;Name=lpxC;Dbxref=GeneID:3190839;gbkey=Gene;gene=lpxC;locus_tag=FTT_0189
NC_006570.2	RefSeq	CDS	204916	205776	.	+	0	ID=cds166;Name=YP_169250.1;Parent=gene194;Note=zinc-dependent%3B catalyzes the deacetylation of UDP-%283-O-acyl%29-N-acetylglucosamine to UDP-3-O-%283-hydroxytetradecanoyl%29-glucosamine in the second step of lipid A biosynthesis;Dbxref=GOA:Q5NI92,InterPro:IPR015870,UniProtKB%2FSwiss-Prot:Q5NI92,Genbank:YP_169250.1,GeneID:3190839;gbkey=CDS;product=UDP-3-O-%5B3-hydroxymyristoyl%5D N-acetylglucosamine deacetylase;protein_id=YP_169250.1;transl_table=11
NC_006570.2	RefSeq	gene	205790	207430	.	-	.	ID=gene195;Name=dnaX;Dbxref=GeneID:3191541;gbkey=Gene;gene=dnaX;locus_tag=FTT_0190c
NC_006570.2	RefSeq	CDS	205790	207430	.	-	0	ID=cds167;Name=YP_169251.1;Parent=gene195;Note=Similar to Q8DB24 DNA polymerase III%2C gamma%2Ftau subunits from Vibrio vulnificus %28734 aa%29. FASTA: opt: 1193 Z-score: 1334.5 E%28%29: 1.9e-66 Smith-Waterman score: 1193%3B 44.893 identity in 421 aa overlap;Dbxref=GOA:Q5NI91,InterPro:IPR012763,UniProtKB%2FTrEMBL:Q5NI91,Genbank:YP_169251.1,GeneID:3191541;gbkey=CDS;product=DNA polymerase III subunit gamma and tau;protein_id=YP_169251.1;transl_table=11
NC_006570.2	RefSeq	gene	207703	208680	.	+	.	ID=gene196;Name=prfB;Dbxref=GeneID:3191240;gbkey=Gene;gene=prfB;locus_tag=FTT_0191
NC_006570.2	RefSeq	CDS	207703	208680	.	+	0	ID=cds168;Name=YP_169252.1;Parent=gene196;Note=Similar to RF2_HAEIN %28P43918%29 Peptide chain release factor 2 from Haemophilus influenzae %28365 aa%29. FASTA: opt: 1542 Z-score: 1839.9 E%28%29: 1.4e-94 Smith-Waterman score: 1542%3B 68.405 identity in 326 aa overlap;Dbxref=GOA:Q5NI90,InterPro:IPR005139,UniProtKB%2FTrEMBL:Q5NI90,Genbank:YP_169252.1,GeneID:3191240;gbkey=CDS;product=peptide chain release factor 2;protein_id=YP_169252.1;transl_table=11
NC_006570.2	RefSeq	gene	208813	210543	.	+	.	ID=gene197;Name=lysU;Dbxref=GeneID:3190947;gbkey=Gene;gene=lysU;locus_tag=FTT_0192
NC_006570.2	RefSeq	CDS	208813	210543	.	+	0	ID=cds169;Name=YP_169253.1;Parent=gene197;Note=Similar to SYK2_ECOLI %28P14825%29 Lysyl-tRNA synthetase%2C heat inducible%2C from E. coli %28504 aa%29. FASTA: opt: 2003 Z-score: 2242.9 E%28%29: 4.9e-117 Smith-Waterman score: 2003%3B 61.066 identity in 488 aa overlap;Dbxref=GOA:Q5NI89,InterPro:IPR018150,UniProtKB%2FTrEMBL:Q5NI89,Genbank:YP_169253.1,GeneID:3190947;gbkey=CDS;product=lysyl-tRNA synthetase;protein_id=YP_169253.1;transl_table=11
NC_006570.2	RefSeq	gene	210928	211470	.	-	.	ID=gene198;Name=FTT_0193c;Dbxref=GeneID:3191362;gbkey=Gene;locus_tag=FTT_0193c
NC_006570.2	RefSeq	CDS	210928	211470	.	-	0	ID=cds170;Name=YP_169254.1;Parent=gene198;Note=Similar to Y208_VIBCH %28Q9KVD8%29 Hypothetical protein VC0208 from Vibrio cholerae %28162 aa%29. FASTA: opt: 414 Z-score: 528.5 E%28%29: 1.5e-21 Smith-Waterman score: 414%3B 41.875 identity in 160 aa overlap ORF ftt0193c;Dbxref=GOA:Q5NI88,InterPro:IPR005134,UniProtKB%2FTrEMBL:Q5NI88,Genbank:YP_169254.1,GeneID:3191362;gbkey=CDS;product=hypothetical protein;protein_id=YP_169254.1;transl_table=11
NC_006570.2	RefSeq	gene	211569	212441	.	-	.	ID=gene199;Name=FTT_0194c;Dbxref=GeneID:3191359;gbkey=Gene;locus_tag=FTT_0194c
NC_006570.2	RefSeq	CDS	211569	212441	.	-	0	ID=cds171;Name=YP_169255.1;Parent=gene199;Note=Similar to Q8X898 Hypothetical 31.1 kDa protein %28Hypothetical membrane protein%29 from E.coli %28274 aa%29. FASTA: opt: 398 Z-score: 431.1 E%28%29: 4e-16 Smith-Waterman score: 398%3B 26.429 identity in 280 aa overlap ORF ftt0194c;Dbxref=GOA:Q5NI87,InterPro:IPR003675,UniProtKB%2FTrEMBL:Q5NI87,Genbank:YP_169255.1,GeneID:3191359;gbkey=CDS;product=hypothetical protein;protein_id=YP_169255.1;transl_table=11
NC_006570.2	RefSeq	gene	212450	213991	.	-	.	ID=gene200;Name=FTT_0195c;Dbxref=GeneID:3191355;gbkey=Gene;locus_tag=FTT_0195c
NC_006570.2	RefSeq	CDS	212450	213991	.	-	0	ID=cds172;Name=YP_169256.1;Parent=gene200;Note=Similar to Q8IX91 L-glutaminase from Homo sapien %28602 aa%29. FASTA: opt: 1441 Z-score: 1670.0 E%28%29: 3.9e-85 Smith-Waterman score: 1441%3B 42.887 identity in 478 aa overlap ORF ftt0195c;Dbxref=GOA:Q5NI86,InterPro:IPR015868,UniProtKB%2FTrEMBL:Q5NI86,Genbank:YP_169256.1,GeneID:3191355;gbkey=CDS;product=L-glutamine synthetase;protein_id=YP_169256.1;transl_table=11
NC_006570.2	RefSeq	gene	214073	215110	.	-	.	ID=gene201;Name=glnA;Dbxref=GeneID:3191892;gbkey=Gene;gene=glnA;locus_tag=FTT_0196c
NC_006570.2	RefSeq	CDS	214073	215110	.	-	0	ID=cds173;Name=YP_169257.1;Parent=gene201;Note=Similar to AAO90051 %28Q83E31%29 Glutamine synthetase from Coxiella burnetti %28359 aa%29. FASTA: opt: 1369 Z-score: 1705.1 E%28%29: 4.4e-87 Smith-Waterman score: 1369%3B 59.226 identity in 336 aa overlap;Dbxref=GOA:Q5NI85,InterPro:IPR014746,UniProtKB%2FTrEMBL:Q5NI85,Genbank:YP_169257.1,GeneID:3191892;gbkey=CDS;product=glutamine synthetase;protein_id=YP_169257.1;transl_table=11
NC_006570.2	RefSeq	gene	215230	216207	.	-	.	ID=gene202;Name=holA;Dbxref=GeneID:3192432;gbkey=Gene;gene=holA;locus_tag=FTT_0197c
NC_006570.2	RefSeq	CDS	215230	216207	.	-	0	ID=cds174;Name=YP_169258.1;Parent=gene202;Note=Similar to Q88DM9 DNA polymerase III%2C delta subunit from Pseudomonas putida %28345 aa%29. FASTA: opt: 380 Z-score: 451.8 E%28%29: 2.8e-17 Smith-Waterman score: 380%3B 28.707 identity in 317 aa overlap;Dbxref=GOA:Q5NI84,InterPro:IPR010372,UniProtKB%2FTrEMBL:Q5NI84,Genbank:YP_169258.1,GeneID:3192432;gbkey=CDS;product=DNA polymerase III subunit delta;protein_id=YP_169258.1;transl_table=11
NC_006570.2	RefSeq	gene	216335	216811	.	+	.	ID=gene203;Name=blc;Dbxref=GeneID:3192374;gbkey=Gene;gene=blc;locus_tag=FTT_0198
NC_006570.2	RefSeq	CDS	216335	216811	.	+	0	ID=cds175;Name=YP_169259.1;Parent=gene203;Note=Similar to Q8EGB4 Lipoprotein Blc from Shewenella oneidensis %28177 aa%29. FASTA: opt: 620 Z-score: 813.1 E%28%29: 2.1e-37 Smith-Waterman score: 620%3B 56.604 identity in 159 aa overlap;Dbxref=GOA:Q5NI83,InterPro:IPR013208,UniProtKB%2FTrEMBL:Q5NI83,Genbank:YP_169259.1,GeneID:3192374;gbkey=CDS;product=outer membrane lipoprotein;protein_id=YP_169259.1;transl_table=11
NC_006570.2	RefSeq	gene	216975	217808	.	+	.	ID=gene204;Name=FTT_0199;Dbxref=GeneID:3191357;gbkey=Gene;locus_tag=FTT_0199
NC_006570.2	RefSeq	CDS	216975	217808	.	+	0	ID=cds176;Name=YP_169260.1;Parent=gene204;Note=ORF ftt0199;Dbxref=UniProtKB%2FTrEMBL:Q5NI82,Genbank:YP_169260.1,GeneID:3191357;gbkey=CDS;product=hypothetical protein;protein_id=YP_169260.1;transl_table=11
NC_006570.2	RefSeq	gene	217756	218373	.	+	.	ID=gene205;Name=FTT_0200;Dbxref=GeneID:3191356;gbkey=Gene;locus_tag=FTT_0200
NC_006570.2	RefSeq	CDS	217756	218373	.	+	0	ID=cds177;Name=YP_169261.1;Parent=gene205;Note=ORF ftt0200;Dbxref=UniProtKB%2FTrEMBL:Q5NI81,Genbank:YP_169261.1,GeneID:3191356;gbkey=CDS;product=hypothetical protein;protein_id=YP_169261.1;transl_table=11
NC_006570.2	RefSeq	gene	218746	220762	.	+	.	ID=gene206;Name=FTT_0201;Dbxref=GeneID:3191353;gbkey=Gene;locus_tag=FTT_0201;pseudo=true
NC_006570.2	RefSeq	repeat_region	218921	218939	.	-	.	ID=id33;Note=ISFtu2 19bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	gene	218947	219690	.	-	.	ID=gene207;Name=isftu2;Dbxref=GeneID:3191805;gbkey=Gene;gene=isftu2;locus_tag=FTT_0202c
NC_006570.2	RefSeq	CDS	218947	219690	.	-	0	ID=cds178;Name=YP_169262.1;Parent=gene207;Note=ISFtu2. Transposase%2C member of the IS5 family. Identical to Q8GM03  transposase from Francisella tularensis %28247 aa%29.;Dbxref=GOA:Q8GM03,InterPro:IPR002559,UniProtKB%2FTrEMBL:Q8GM03,Genbank:YP_169262.1,GeneID:3191805;gbkey=CDS;product=transposase;protein_id=YP_169262.1;transl_table=11
NC_006570.2	RefSeq	repeat_region	219767	219785	.	-	.	ID=id34;Note=ISFtu2 19bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	gene	220941	222488	.	-	.	ID=gene208;Name=purH;Dbxref=GeneID:3191667;gbkey=Gene;gene=purH;locus_tag=FTT_0203c
NC_006570.2	RefSeq	CDS	220941	222488	.	-	0	ID=cds179;Name=YP_169263.1;Parent=gene208;Note=involved in de novo purine biosynthesis;Dbxref=GOA:Q5NI79,InterPro:IPR013982,UniProtKB%2FTrEMBL:Q5NI79,Genbank:YP_169263.1,GeneID:3191667;gbkey=CDS;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase%2FIMP cyclohydrolase;protein_id=YP_169263.1;transl_table=11
NC_006570.2	RefSeq	gene	222665	223951	.	+	.	ID=gene209;Name=purA;Dbxref=GeneID:3192003;gbkey=Gene;gene=purA;locus_tag=FTT_0204
NC_006570.2	RefSeq	CDS	222665	223951	.	+	0	ID=cds180;Name=YP_169264.1;Parent=gene209;Note=catalyzes the formation of N6-%281%2C2%2C-dicarboxyethyl%29-AMP from L-aspartate%2C inosine monophosphate and GTP in AMP biosynthesis;Dbxref=GOA:Q5NI78,InterPro:IPR018220,UniProtKB%2FSwiss-Prot:Q5NI78,Genbank:YP_169264.1,GeneID:3192003;gbkey=CDS;product=adenylosuccinate synthetase;protein_id=YP_169264.1;transl_table=11
NC_006570.2	RefSeq	gene	223955	224488	.	+	.	ID=gene210;Name=hpt;Dbxref=GeneID:3192107;gbkey=Gene;gene=hpt;locus_tag=FTT_0205
NC_006570.2	RefSeq	CDS	223955	224488	.	+	0	ID=cds181;Name=YP_169265.1;Parent=gene210;Note=Similar to Q8R7L0 Hypoxanthine-guanine phosphoribosyltransferase from Thermoanaerobacter tengcogenesis %28181 aa%29. FASTA: opt: 509 Z-score: 658.7 E%28%29: 8.5e-29 Smith-Waterman score: 509%3B 47.337 identity in 169 aa overlap;Dbxref=GOA:Q5NI77,InterPro:IPR005904,UniProtKB%2FTrEMBL:Q5NI77,Genbank:YP_169265.1,GeneID:3192107;gbkey=CDS;product=hypoxanthine-guanine phosphoribosyltransferase;protein_id=YP_169265.1;transl_table=11
NC_006570.2	RefSeq	gene	224510	225225	.	-	.	ID=gene211;Name=FTT_0206c;Dbxref=GeneID:3191354;gbkey=Gene;locus_tag=FTT_0206c;pseudo=true
NC_006570.2	RefSeq	gene	225323	226165	.	-	.	ID=gene212;Name=FTT_0207c;Dbxref=GeneID:3191352;gbkey=Gene;locus_tag=FTT_0207c
NC_006570.2	RefSeq	CDS	225323	226165	.	-	0	ID=cds182;Name=YP_169266.1;Parent=gene212;Note=Similar to Q8G5L3 Possible permease of ABC transporter system from Bifidobacterium longum %28277 aa%29. FASTA: opt: 582 Z-score: 622.6 E%28%29: 8.7e-27 Smith-Waterman score: 582%3B 38.372identity in 258 aa overlap ORF ftt0207c;Dbxref=GOA:Q5NI76,InterPro:IPR001626,UniProtKB%2FTrEMBL:Q5NI76,Genbank:YP_169266.1,GeneID:3191352;gbkey=CDS;product=ABC transporter permease;protein_id=YP_169266.1;transl_table=11
NC_006570.2	RefSeq	gene	226107	226784	.	-	.	ID=gene213;Name=FTT_0208c;Dbxref=GeneID:3191351;gbkey=Gene;locus_tag=FTT_0208c
NC_006570.2	RefSeq	CDS	226107	226784	.	-	0	ID=cds183;Name=YP_169267.1;Parent=gene213;Note=Similar to MNTB_BACSU %28O34338%29 Manganese transport system ATP-binding protein mntB from Bacillus subtilis %28250 aa%29. FASTA: opt: 365 Z-score: 426.7 E%28%29: 7.1e-16 Smith-Waterman score: 365%3B 30.986 identity in 213 aa overlap ORF ftt0208c;Dbxref=GOA:Q5NI75,InterPro:IPR003593,UniProtKB%2FTrEMBL:Q5NI75,Genbank:YP_169267.1,GeneID:3191351;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=YP_169267.1;transl_table=11
NC_006570.2	RefSeq	gene	226786	227703	.	-	.	ID=gene214;Name=FTT_0209c;Dbxref=GeneID:3191350;gbkey=Gene;locus_tag=FTT_0209c
NC_006570.2	RefSeq	CDS	226786	227703	.	-	0	ID=cds184;Name=YP_169268.1;Parent=gene214;Note=Similar to Q88TE8 ABC transporter substrate binding protein from Lactobacillus plantarum %28297 aa%29. FASTA: opt: 555 Z-score: 628.8 E%28%29: 3.9e-27 Smith-Waterman score: 555%3B 30.935identity in 278 aa overlap ORF ftt0209c;Dbxref=GOA:Q5NI74,InterPro:IPR006129,UniProtKB%2FTrEMBL:Q5NI74,Genbank:YP_169268.1,GeneID:3191350;gbkey=CDS;product=periplasmic solute binding family protein;protein_id=YP_169268.1;transl_table=11
NC_006570.2	RefSeq	gene	227781	228998	.	-	.	ID=gene215;Name=FTT_0210c;Dbxref=GeneID:3191349;gbkey=Gene;locus_tag=FTT_0210c;pseudo=true
NC_006570.2	RefSeq	gene	229119	229583	.	-	.	ID=gene216;Name=FTT_0211c;Dbxref=GeneID:3191348;gbkey=Gene;locus_tag=FTT_0211c
NC_006570.2	RefSeq	CDS	229119	229583	.	-	0	ID=cds185;Name=YP_169269.1;Parent=gene216;Note=Similar to Q9F6B1 Outer membrane lipoprotein Pcp from Edwardsiella tarda %28155 aa%29. FASTA: opt: 294 Z-score: 329.0 E%28%29: 2e-10 Smith-Waterman score: 294%3B 35.032 identity in 157 aa overlap ORF ftt0211c;Dbxref=UniProtKB%2FTrEMBL:Q5NI73,Genbank:YP_169269.1,GeneID:3191348;gbkey=CDS;product=outer membrane lipoprotein;protein_id=YP_169269.1;transl_table=11
NC_006570.2	RefSeq	gene	229594	230190	.	-	.	ID=gene217;Name=wrbA;Dbxref=GeneID:3192104;gbkey=Gene;gene=wrbA;locus_tag=FTT_0212c
NC_006570.2	RefSeq	CDS	229594	230190	.	-	0	ID=cds186;Name=YP_169270.1;Parent=gene217;Note=Similar to Q9I509 Trp repressor binding protein WrbA from Pseudomonas aeruginosa %28198 aa%29. FASTA: opt: 727 Z-score: 948.0 E%28%29: 6.5e-45 Smith-Waterman score: 727%3B 54.974 identity in 191 aa overlap;Dbxref=GOA:Q5NI72,InterPro:IPR010089,UniProtKB%2FTrEMBL:Q5NI72,Genbank:YP_169270.1,GeneID:3192104;gbkey=CDS;product=trp repressor binding protein;protein_id=YP_169270.1;transl_table=11
NC_006570.2	RefSeq	gene	230197	231384	.	+	.	ID=gene218;Name=rbn;Dbxref=GeneID:3191645;gbkey=Gene;gene=rbn;locus_tag=FTT_0213
NC_006570.2	RefSeq	CDS	230197	231384	.	+	0	ID=cds187;Name=YP_169271.1;Parent=gene218;Note=Similar to RBN_ECOLI %28P32146%29 tRNA processing ribonuclease BN from E. coli %28290 aa%29. FASTA: opt: 535 Z-score: 578.5 E%28%29: 2.5e-24 Smith-Waterman score: 535%3B 33.813 identity in 278 aa overlap;Dbxref=GOA:Q5NI71,InterPro:IPR017039,UniProtKB%2FTrEMBL:Q5NI71,Genbank:YP_169271.1,GeneID:3191645;gbkey=CDS;product=tRNA processing ribonuclease BN;protein_id=YP_169271.1;transl_table=11
NC_006570.2	RefSeq	gene	231403	231960	.	+	.	ID=gene219;Name=FTT_0214;Dbxref=GeneID:3191346;gbkey=Gene;locus_tag=FTT_0214;pseudo=true
NC_006570.2	RefSeq	gene	231974	234127	.	+	.	ID=gene220;Name=priA;Dbxref=GeneID:3191237;gbkey=Gene;gene=priA;locus_tag=FTT_0215
NC_006570.2	RefSeq	CDS	231974	234127	.	+	0	ID=cds188;Name=YP_169272.1;Parent=gene220;Note=Similar to Q9KNQ3 Primosomal protein N%60 from Vibrio cholerae %28734 aa%29. FASTA: opt: 1587 Z-score: 1770.8 E%28%29: 9.7e-91 Smith-Waterman score: 1619%3B 37.823 identity in 735 aa overlap;Dbxref=GOA:Q5NI70,InterPro:IPR014021,UniProtKB%2FTrEMBL:Q5NI70,Genbank:YP_169272.1,GeneID:3191237;gbkey=CDS;product=primosomal protein N%27;protein_id=YP_169272.1;transl_table=11
NC_006570.2	RefSeq	repeat_region	234193	234204	.	+	.	ID=id35;Note=ISFtu1 12bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	234205	234220	.	+	.	ID=id36;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	234221	234236	.	+	.	ID=id37;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;gbkey=repeat_region
NC_006570.2	RefSeq	gene	234257	235041	.	+	.	ID=gene221;Name=isftu1;Dbxref=GeneID:3191113;gbkey=Gene;gene=isftu1;locus_tag=FTT_0216
NC_006570.2	RefSeq	CDS	234257	234583	.	+	0	ID=cds189;Name=YP_169273.1;Parent=gene221;Note=ISFtu1. Transposase%2C member of the IS630 Tc-1 mariner family. Identical to Q93EJ6  transposase from Francisella tularensis %28118 aa%29 from aa 144-261. Identical to Q93EJ7  transposase from Francisella tularensis %28126 aa%29 from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF%27s. ORF1 %28identical to Q93EJ7%29 contains a programmed ribosomal frameshifting motif%2C 5%27-AAAAAAAG-3%27 at aa position 109 which permits frameshifting to ORF2 %28identical to Q93EJ6%29 to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family%2C and also mariner elements%2C show that this transposase shares strongly conserved residues%2C including a fully conserved dipeptide%2CAsp-Glu %28DE%29%2C and a block consisting of a fully conserved Asp and highly conserved Glu%2C separated by 34 or 35 residues %28D35E%29. The conserved dipeptide is only present if ribosomal frameshifting occurs.;Dbxref=UniProtKB%2FTrEMBL:Q5NIH2,Genbank:YP_169273.1,GeneID:3191113;gbkey=CDS;product=transposase;protein_id=YP_169273.1;transl_table=11
NC_006570.2	RefSeq	CDS	234583	235041	.	+	0	ID=cds189;Name=YP_169273.1;Parent=gene221;Note=ISFtu1. Transposase%2C member of the IS630 Tc-1 mariner family. Identical to Q93EJ6  transposase from Francisella tularensis %28118 aa%29 from aa 144-261. Identical to Q93EJ7  transposase from Francisella tularensis %28126 aa%29 from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF%27s. ORF1 %28identical to Q93EJ7%29 contains a programmed ribosomal frameshifting motif%2C 5%27-AAAAAAAG-3%27 at aa position 109 which permits frameshifting to ORF2 %28identical to Q93EJ6%29 to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family%2C and also mariner elements%2C show that this transposase shares strongly conserved residues%2C including a fully conserved dipeptide%2CAsp-Glu %28DE%29%2C and a block consisting of a fully conserved Asp and highly conserved Glu%2C separated by 34 or 35 residues %28D35E%29. The conserved dipeptide is only present if ribosomal frameshifting occurs.;Dbxref=UniProtKB%2FTrEMBL:Q5NIH2,Genbank:YP_169273.1,GeneID:3191113;gbkey=CDS;product=transposase;protein_id=YP_169273.1;transl_table=11
NC_006570.2	RefSeq	repeat_region	235129	235140	.	+	.	ID=id38;Note=ISFtu1 12bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	gene	235142	235378	.	+	.	ID=gene222;Name=FTT_0217;Dbxref=GeneID:3191347;gbkey=Gene;locus_tag=FTT_0217;pseudo=true
NC_006570.2	RefSeq	gene	235388	235900	.	-	.	ID=gene223;Name=FTT_0218c;Dbxref=GeneID:3191344;gbkey=Gene;locus_tag=FTT_0218c;pseudo=true
NC_006570.2	RefSeq	gene	235980	236975	.	-	.	ID=gene224;Name=FTT_0219c;Dbxref=GeneID:3191345;gbkey=Gene;locus_tag=FTT_0219c
NC_006570.2	RefSeq	CDS	235980	236975	.	-	0	ID=cds190;Name=YP_169274.1;Parent=gene224;Note=Similar to Q81FW2 Low-affinity inorganic phosphate transport protein from Bacillus cereus %28332 aa%29. FASTA: opt: 932 Z-score: 1065.7 E%28%29: 1.8e-51 Smith-Waterman score: 932%3B 42.470 identity in 332 aa overlap ORF ftt0219c;Dbxref=GOA:Q5NI68,InterPro:IPR001204,UniProtKB%2FTrEMBL:Q5NI68,Genbank:YP_169274.1,GeneID:3191345;gbkey=CDS;product=phosphate transport protein;protein_id=YP_169274.1;transl_table=11
NC_006570.2	RefSeq	gene	236993	237649	.	-	.	ID=gene225;Name=FTT_0220c;Dbxref=GeneID:3191343;gbkey=Gene;locus_tag=FTT_0220c
NC_006570.2	RefSeq	CDS	236993	237649	.	-	0	ID=cds191;Name=YP_169275.1;Parent=gene225;Note=Similar to Q8XMV6 Hypothetical protein CPE0582 from Clostridium perfringens %28210 aa%29. FASTA: opt: 207 Z-score: 248.6 E%28%29: 5.9e-06 Smith-Waterman score: 207%3B 24.883 identity in 213 aa overlap ORF ftt0220c;Dbxref=UniProtKB%2FTrEMBL:Q5NI67,Genbank:YP_169275.1,GeneID:3191343;gbkey=CDS;product=hypothetical protein;protein_id=YP_169275.1;transl_table=11
NC_006570.2	RefSeq	gene	237886	239430	.	+	.	ID=gene226;Name=acpA;Dbxref=GeneID:3192410;gbkey=Gene;gene=acpA;locus_tag=FTT_0221
NC_006570.2	RefSeq	CDS	237886	239430	.	+	0	ID=cds192;Name=YP_169276.1;Parent=gene226;Dbxref=GOA:Q5NI66,InterPro:IPR007312,UniProtKB%2FTrEMBL:Q5NI66,Genbank:YP_169276.1,GeneID:3192410;gbkey=CDS;product=acid phosphatase;protein_id=YP_169276.1;transl_table=11
NC_006570.2	RefSeq	gene	239437	240213	.	-	.	ID=gene227;Name=ybgK;Dbxref=GeneID:3192142;gbkey=Gene;gene=ybgK;locus_tag=FTT_0222c
NC_006570.2	RefSeq	CDS	239437	240213	.	-	0	ID=cds193;Name=YP_169277.1;Parent=gene227;Note=Similar to YBGK_HAEIN %28P44298%29 Hypothetical protein HI1730 from Haemophilus influenzae %28309 aa%29. FASTA: opt: 308 Z-score: 386.7 E%28%29: 1.2e-13 Smith-Waterman score: 352%3B 32.453 identity in 265 aa overlap;Dbxref=GOA:Q5NI65,InterPro:IPR003778,UniProtKB%2FTrEMBL:Q5NI65,Genbank:YP_169277.1,GeneID:3192142;gbkey=CDS;product=hydrolase subunit;protein_id=YP_169277.1;transl_table=11
NC_006570.2	RefSeq	gene	240255	240953	.	-	.	ID=gene228;Name=ybgL;Dbxref=GeneID:3192131;gbkey=Gene;gene=ybgL;locus_tag=FTT_0223c
NC_006570.2	RefSeq	CDS	240255	240953	.	-	0	ID=cds194;Name=YP_169278.1;Parent=gene228;Note=Similar to Y993_PYRAB %28Q9V005%29 Hypothetical UPF0271 protein PYRAB09930 from Pyrococcus abyssi %28255 aa%29. FASTA: opt: 430 Z-score: 541.0 E%28%29: 3e-22 Smith-Waterman score: 430%3B 35.294 identity in 238 aa overlap;Dbxref=InterPro:IPR005501,UniProtKB%2FTrEMBL:Q5NI64,Genbank:YP_169278.1,GeneID:3192131;gbkey=CDS;product=LamB%2FYcsF family protein;protein_id=YP_169278.1;transl_table=11
NC_006570.2	RefSeq	gene	240956	241562	.	-	.	ID=gene229;Name=FTT_0224c;Dbxref=GeneID:3191342;gbkey=Gene;locus_tag=FTT_0224c;pseudo=true
NC_006570.2	RefSeq	gene	241608	242639	.	-	.	ID=gene230;Name=FTT_0225c;Dbxref=GeneID:3191341;gbkey=Gene;locus_tag=FTT_0225c;pseudo=true
NC_006570.2	RefSeq	repeat_region	242639	242650	.	-	.	ID=id39;Note=ISFtu1 12bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	gene	242738	243522	.	-	.	ID=gene231;Name=isftu1;Dbxref=GeneID:3191787;gbkey=Gene;gene=isftu1;locus_tag=FTT_0226c
NC_006570.2	RefSeq	CDS	243196	243522	.	-	0	ID=cds195;Name=YP_169279.1;Parent=gene231;Note=ISFtu1. Transposase%2C member of the IS630 Tc-1 mariner family. Identical to Q93EJ6  transposase from Francisella tularensis %28118 aa%29 from aa 144-261. Identical to Q93EJ7  transposase from Francisella tularensis %28126 aa%29 from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF%27s. ORF1 %28identical to Q93EJ7%29 contains a programmed ribosomal frameshifting motif%2C 5%27-AAAAAAAG-3%27 at aa position 109 which permits frameshifting to ORF2 %28identical to Q93EJ6%29 to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family%2C and also mariner elements%2C show that this transposase shares strongly conserved residues%2C including a fully conserved dipeptide%2CAsp-Glu %28DE%29%2C and a block consisting of a fully conserved Asp and highly conserved Glu%2C separated by 34 or 35 residues %28D35E%29. The conserved dipeptide is only present if ribosomal frameshifting occurs.;Dbxref=UniProtKB%2FTrEMBL:Q5NIH2,Genbank:YP_169279.1,GeneID:3191787;gbkey=CDS;product=transposase;protein_id=YP_169279.1;transl_table=11
NC_006570.2	RefSeq	CDS	242738	243196	.	-	0	ID=cds195;Name=YP_169279.1;Parent=gene231;Note=ISFtu1. Transposase%2C member of the IS630 Tc-1 mariner family. Identical to Q93EJ6  transposase from Francisella tularensis %28118 aa%29 from aa 144-261. Identical to Q93EJ7  transposase from Francisella tularensis %28126 aa%29 from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF%27s. ORF1 %28identical to Q93EJ7%29 contains a programmed ribosomal frameshifting motif%2C 5%27-AAAAAAAG-3%27 at aa position 109 which permits frameshifting to ORF2 %28identical to Q93EJ6%29 to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family%2C and also mariner elements%2C show that this transposase shares strongly conserved residues%2C including a fully conserved dipeptide%2CAsp-Glu %28DE%29%2C and a block consisting of a fully conserved Asp and highly conserved Glu%2C separated by 34 or 35 residues %28D35E%29. The conserved dipeptide is only present if ribosomal frameshifting occurs.;Dbxref=UniProtKB%2FTrEMBL:Q5NIH2,Genbank:YP_169279.1,GeneID:3191787;gbkey=CDS;product=transposase;protein_id=YP_169279.1;transl_table=11
NC_006570.2	RefSeq	repeat_region	243543	243558	.	-	.	ID=id40;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;gbkey=repeat_region
NC_006570.2	RefSeq	gene	243546	243740	.	-	.	ID=gene232;Name=FTT_0227c;Dbxref=GeneID:3191340;gbkey=Gene;locus_tag=FTT_0227c
NC_006570.2	RefSeq	CDS	243546	243740	.	-	0	ID=cds196;Name=YP_169280.1;Parent=gene232;Note=ORF ftt0227c;Dbxref=UniProtKB%2FTrEMBL:Q5NI62,Genbank:YP_169280.1,GeneID:3191340;gbkey=CDS;product=hypothetical protein;protein_id=YP_169280.1;transl_table=11
NC_006570.2	RefSeq	repeat_region	243559	243574	.	-	.	ID=id41;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;Dbxref=GeneID:3191340;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	243575	243586	.	-	.	ID=id42;Note=ISFtu1 12bp terminal inverted repeat;Dbxref=GeneID:3191340;gbkey=repeat_region
NC_006570.2	RefSeq	gene	243775	244311	.	-	.	ID=gene233;Name=orn;Dbxref=GeneID:3191187;gbkey=Gene;gene=orn;locus_tag=FTT_0228c
NC_006570.2	RefSeq	CDS	243775	244311	.	-	0	ID=cds197;Name=YP_169281.1;Parent=gene233;Note=3%27-5%27 exoribonuclease specific for small oligoribonuclotides;Dbxref=GOA:Q5NI61,InterPro:IPR013520,UniProtKB%2FSwiss-Prot:Q5NI61,Genbank:YP_169281.1,GeneID:3191187;gbkey=CDS;product=oligoribonuclease;protein_id=YP_169281.1;transl_table=11
NC_006570.2	RefSeq	gene	244314	244883	.	-	.	ID=gene234;Name=efp;Dbxref=GeneID:3191555;gbkey=Gene;gene=efp;locus_tag=FTT_0229c
NC_006570.2	RefSeq	CDS	244314	244883	.	-	0	ID=cds198;Name=YP_169282.1;Parent=gene234;Note=Involved in peptide bond synthesis%3B alters the affinity of the ribosome for aminoacyl-tRNA;Dbxref=GOA:Q5NI60,InterPro:IPR015365,UniProtKB%2FSwiss-Prot:Q5NI60,Genbank:YP_169282.1,GeneID:3191555;gbkey=CDS;product=elongation factor P;protein_id=YP_169282.1;transl_table=11
NC_006570.2	RefSeq	gene	244923	245330	.	-	.	ID=gene235;Name=FTT_0230c;Dbxref=GeneID:3191339;gbkey=Gene;locus_tag=FTT_0230c
NC_006570.2	RefSeq	CDS	244923	245330	.	-	0	ID=cds199;Name=YP_169283.1;Parent=gene235;Note=Similar to Q87B50 Type IV pilin from Xylella fastidiosa %28142 aa%29. FASTA: opt: 224 Z-score: 300.3 E%28%29: 7.8e-09 Smith-Waterman score: 224%3B 32.090 identity in 134 aa overlap The pili fiber building block protein has a highly distinct primary structure%3B a short positively charged leader sequence%2C and a highly conserved and highly hydrophobic amino-terminal domain which forms the core of the pilus fiber%3B A variety of studies suggest that the invariant glycine %28G%29 at -1 is required for prepilin cleavage and assembly and that the glutamate %28E%29 at %2B 5 is essential for assembly and efficient N-terminal methylation but not cleavage. The region near the carboxy terminus is often hydrophilic and is stabilized by one or two disulfide bridges that may be involved in recognition of receptors. The genes with these characteristics are usually termed pilA%2C pilE%2C pilV%2C pilW%2C pilX and FimU. %28Mattick John S.. %27Type IV Pili and twitching motility%27. Annu. Rev. Microbiol. 2002. 56:289-314.%29 This protein has all the characteristics described above. ORF ftt0230c;Dbxref=GOA:Q5NI59,InterPro:IPR012902,UniProtKB%2FTrEMBL:Q5NI59,Genbank:YP_169283.1,GeneID:3191339;gbkey=CDS;product=Type IV pili fiber building block protein;protein_id=YP_169283.1;transl_table=11
NC_006570.2	RefSeq	gene	245343	246266	.	-	.	ID=gene236;Name=htrB;Dbxref=GeneID:3191968;gbkey=Gene;gene=htrB;locus_tag=FTT_0231c
NC_006570.2	RefSeq	CDS	245343	246266	.	-	0	ID=cds200;Name=YP_169284.1;Parent=gene236;Note=Similar to HTRB_ECOLI %28P24187%29 Lipid A biosynthesis lauroyl acyltransferase from E. coli %28306 aa%29. FASTA: opt: 542 Z-score: 697.7 E%28%29: 5.7e-31 Smith-Waterman score: 542%3B 32.895 identity in 304 aa overlap %288-307:14-306%29 n.b.Paralog of FTT0232c;Dbxref=GOA:Q5NI58,InterPro:IPR004960,UniProtKB%2FTrEMBL:Q5NI58,Genbank:YP_169284.1,GeneID:3191968;gbkey=CDS;product=acyltransferase;protein_id=YP_169284.1;transl_table=11
NC_006570.2	RefSeq	gene	246327	247226	.	-	.	ID=gene237;Name=ddg;Dbxref=GeneID:3191506;gbkey=Gene;gene=ddg;locus_tag=FTT_0232c
NC_006570.2	RefSeq	CDS	246327	247226	.	-	0	ID=cds201;Name=YP_169285.1;Parent=gene237;Note=Similar to Q8ZNA3 %28Q8ZNA3%29 Cold shock-induced palmitoleoyl transferase from Salmonella typhimurium %28306 aa%29. FASTA: opt: 629 Z-score: 782.5 E%28%29: 1.1e-35 Smith-Waterman score: 629%3B 36.755 identity in 302 aa overlap Paralog of FTT0231c;Dbxref=GOA:Q5NI57,InterPro:IPR004960,UniProtKB%2FTrEMBL:Q5NI57,Genbank:YP_169285.1,GeneID:3191506;gbkey=CDS;product=acyltransferase;protein_id=YP_169285.1;transl_table=11
NC_006570.2	RefSeq	gene	247233	248888	.	-	.	ID=gene238;Name=yidC;Dbxref=GeneID:3191276;gbkey=Gene;gene=yidC;locus_tag=FTT_0233c
NC_006570.2	RefSeq	CDS	247233	248888	.	-	0	ID=cds202;Name=YP_169286.1;Parent=gene238;Note=Similar to 60IM_COXBU %28P45650%29 60 kDa inner-membrane protein homolog from Coxiella burnetti %28566 aa%29. FASTA: opt: 1434 Z-score: 1537.8 E%28%29: 8.4e-78 Smith-Waterman score: 1434%3B 41.815 identity in 562 aa overlap;Dbxref=GOA:Q5NI56,InterPro:IPR013308,UniProtKB%2FSwiss-Prot:Q5NI56,Genbank:YP_169286.1,GeneID:3191276;gbkey=CDS;product=inner-membrane protein;protein_id=YP_169286.1;transl_table=11
NC_006570.2	RefSeq	gene	248897	249109	.	-	.	ID=gene239;Name=FTT_0234c;Dbxref=GeneID:3191338;gbkey=Gene;locus_tag=FTT_0234c
NC_006570.2	RefSeq	CDS	248897	249109	.	-	0	ID=cds203;Name=YP_169287.1;Parent=gene239;Note=Similar to Q8RHA5 Hypothetical protein FN0003 from Fusobacterium nucleatum %2882 aa%29. FASTA: opt: 273 Z-score: 406.9 E%28%29: 8.2e-15 Smith-Waterman score: 273%3B 53.623 identity in 69 aa overlap ORF ftt0234c;Dbxref=InterPro:IPR002696,UniProtKB%2FSwiss-Prot:Q5NI55,Genbank:YP_169287.1,GeneID:3191338;gbkey=CDS;product=hypothetical protein;protein_id=YP_169287.1;transl_table=11
NC_006570.2	RefSeq	gene	249121	249522	.	-	.	ID=gene240;Name=rnpA;Dbxref=GeneID:3191068;gbkey=Gene;gene=rnpA;locus_tag=FTT_0235c
NC_006570.2	RefSeq	CDS	249121	249522	.	-	0	ID=cds204;Name=YP_169288.1;Parent=gene240;Note=Similar to RNPA_VIBCH %28Q9KVY2%29 Ribonuclease P protein component from Vibrio cholerae %28118 aa%29. FASTA: opt: 189 Z-score: 256.8 E%28%29: 2.1e-06 Smith-Waterman score: 189%3B 35.870 identity in 92 aa overlap;Dbxref=GOA:Q5NI54,InterPro:IPR014721,UniProtKB%2FTrEMBL:Q5NI54,Genbank:YP_169288.1,GeneID:3191068;gbkey=CDS;product=ribonuclease P protein component;protein_id=YP_169288.1;transl_table=11
NC_006570.2	RefSeq	gene	249464	249598	.	-	.	ID=gene241;Name=rpmH;Dbxref=GeneID:3191988;gbkey=Gene;gene=rpmH;locus_tag=FTT_0236c
NC_006570.2	RefSeq	CDS	249464	249598	.	-	0	ID=cds205;Name=YP_169289.1;Parent=gene241;Note=in Escherichia coli transcription of this gene is enhanced by polyamines;Dbxref=GOA:Q5NI53,InterPro:IPR000271,UniProtKB%2FSwiss-Prot:Q5NI53,Genbank:YP_169289.1,GeneID:3191988;gbkey=CDS;product=50S ribosomal protein L34;protein_id=YP_169289.1;transl_table=11
NC_006570.2	RefSeq	gene	249690	250148	.	-	.	ID=gene242;Name=FTT_0237c;Dbxref=GeneID:3191337;gbkey=Gene;locus_tag=FTT_0237c
NC_006570.2	RefSeq	CDS	249690	250148	.	-	0	ID=cds206;Name=YP_169290.1;Parent=gene242;Note=ORF ftt0237c;Dbxref=UniProtKB%2FTrEMBL:Q5NI52,Genbank:YP_169290.1,GeneID:3191337;gbkey=CDS;product=hypothetical protein;protein_id=YP_169290.1;transl_table=11
NC_006570.2	RefSeq	gene	250275	251048	.	+	.	ID=gene243;Name=aroE1;Dbxref=GeneID:3190948;gbkey=Gene;gene=aroE1;locus_tag=FTT_0238
NC_006570.2	RefSeq	CDS	250275	251048	.	+	0	ID=cds207;Name=YP_169291.1;Parent=gene243;Note=Similar to AROE_VIBVU %28Q8DDD4%29 Shikimate 5-dehydrogenase from Vibrio vulnificus %28277 aa%29. FASTA: opt: 567 Z-score: 672.1 E%28%29: 1.5e-29 Smith-Waterman score: 567%3B 37.984 identity in 258 aa overlap;Dbxref=GOA:Q5NI51,InterPro:IPR016040,UniProtKB%2FTrEMBL:Q5NI51,Genbank:YP_169291.1,GeneID:3190948;gbkey=CDS;product=shikimate 5-dehydrogenase;protein_id=YP_169291.1;transl_table=11
NC_006570.2	RefSeq	gene	251115	252470	.	+	.	ID=gene244;Name=murC;Dbxref=GeneID:3191258;gbkey=Gene;gene=murC;locus_tag=FTT_0239
NC_006570.2	RefSeq	CDS	251115	252470	.	+	0	ID=cds208;Name=YP_169292.1;Parent=gene244;Note=Similar to Q9F1M9 MurC from Shewanella violacae %28494 aa%29. FASTA: opt: 1010 Z-score: 1212.3 E%28%29: 1.2e-59 Smith-Waterman score: 1010%3B 36.761 identity in 457 aa overlap;Dbxref=GOA:Q5NI50,InterPro:IPR016040,UniProtKB%2FSwiss-Prot:Q5NI50,Genbank:YP_169292.1,GeneID:3191258;gbkey=CDS;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=YP_169292.1;transl_table=11
NC_006570.2	RefSeq	gene	252463	253335	.	+	.	ID=gene245;Name=FTT_0240;Dbxref=GeneID:3191336;gbkey=Gene;locus_tag=FTT_0240
NC_006570.2	RefSeq	CDS	252463	253335	.	+	0	ID=cds209;Name=YP_169293.1;Parent=gene245;Note=Similar to Q87SH3 Conserved hypothetical protein from Vibrio parahaemolyticus %28287 aa%29. FASTA: opt: 744 Z-score: 882.7 E%28%29: 2.8e-41 Smith-Waterman score: 744%3B 46.996 identity in 283 aa overlap ORF ftt0240;Dbxref=GOA:Q5NI49,InterPro:IPR018063,UniProtKB%2FTrEMBL:Q5NI49,Genbank:YP_169293.1,GeneID:3191336;gbkey=CDS;product=tetrapyrrole methyltransferase family protein;protein_id=YP_169293.1;transl_table=11
NC_006570.2	RefSeq	gene	253346	253816	.	-	.	ID=gene246;Name=FTT_0241c;Dbxref=GeneID:3191333;gbkey=Gene;locus_tag=FTT_0241c
NC_006570.2	RefSeq	CDS	253346	253816	.	-	0	ID=cds210;Name=YP_169294.1;Parent=gene246;Note=ORF ftt0241c;Dbxref=UniProtKB%2FTrEMBL:Q5NI48,Genbank:YP_169294.1,GeneID:3191333;gbkey=CDS;product=hypothetical protein;protein_id=YP_169294.1;transl_table=11
NC_006570.2	RefSeq	gene	254156	254719	.	+	.	ID=gene247;Name=FTT_0242;Dbxref=GeneID:3191334;gbkey=Gene;locus_tag=FTT_0242
NC_006570.2	RefSeq	CDS	254156	254719	.	+	0	ID=cds211;Name=YP_169295.1;Parent=gene247;Note=Similar to Q83DS9 Hypothetical protein CBU0616 from Coxiella burnetii %28196 aa%29. FASTA: opt: 376 Z-score: 484.1 E%28%29: 4.5e-19 Smith-Waterman score: 376%3B 37.634 identity in 186 aa overlap ORF ftt0242;Dbxref=UniProtKB%2FTrEMBL:Q5NI47,Genbank:YP_169295.1,GeneID:3191334;gbkey=CDS;product=hypothetical protein;protein_id=YP_169295.1;transl_table=11
NC_006570.2	RefSeq	gene	254792	255571	.	+	.	ID=gene248;Name=FTT_0243;Dbxref=GeneID:3191331;gbkey=Gene;locus_tag=FTT_0243
NC_006570.2	RefSeq	CDS	254792	255571	.	+	0	ID=cds212;Name=YP_169296.1;Parent=gene248;Note=weak similarity to M. musculus protein%2C1700056O17 Rik protein %28233 aa%29 ORF ftt0243;Dbxref=InterPro:IPR009091,UniProtKB%2FTrEMBL:Q5NI46,Genbank:YP_169296.1,GeneID:3191331;gbkey=CDS;product=hypothetical protein;protein_id=YP_169296.1;transl_table=11
NC_006570.2	RefSeq	gene	255555	258296	.	+	.	ID=gene249;Name=FTT_0244;Dbxref=GeneID:3191332;gbkey=Gene;locus_tag=FTT_0244
NC_006570.2	RefSeq	CDS	255555	258296	.	+	0	ID=cds213;Name=YP_169297.1;Parent=gene249;Note=Similar to Q8R5Z3 DNA%2FRNA helicase %28DEAD%2FDEAH box family%29 from Fusobacterium nucleatum %28942 aa%29. FASTA: opt: 2318 Z-score: 2654.5 E%28%29: 5.8e-140 Smith-Waterman score: 2473%3B 45.087 identity in 916 aa overlap ORF ftt0244;Dbxref=GOA:Q5NI45,InterPro:IPR014021,UniProtKB%2FTrEMBL:Q5NI45,Genbank:YP_169297.1,GeneID:3191332;gbkey=CDS;product=DNA%2FRNA helicase;protein_id=YP_169297.1;transl_table=11
NC_006570.2	RefSeq	gene	258372	259208	.	+	.	ID=gene250;Name=usp;Dbxref=GeneID:3191912;gbkey=Gene;gene=usp;locus_tag=FTT_0245
NC_006570.2	RefSeq	CDS	258372	259208	.	+	0	ID=cds214;Name=YP_169298.1;Parent=gene250;Note=Similar to Q8PWX4 Universal stress protein from Methanosarcina maizae %28323 aa%29. FASTA: opt: 347 Z-score: 418.2 E%28%29: 2.1e-15 Smith-Waterman score: 347%3B 31.849 identity in 292 aa overlap;Dbxref=GOA:Q5NI44,InterPro:IPR014729,UniProtKB%2FTrEMBL:Q5NI44,Genbank:YP_169298.1,GeneID:3191912;gbkey=CDS;product=universal stress protein;protein_id=YP_169298.1;transl_table=11
NC_006570.2	RefSeq	gene	259287	259502	.	-	.	ID=gene251;Name=FTT_0246c;Dbxref=GeneID:3191329;gbkey=Gene;locus_tag=FTT_0246c;pseudo=true
NC_006570.2	RefSeq	repeat_region	259504	259515	.	+	.	ID=id43;Note=ISFtu1 12bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	259516	259531	.	+	.	ID=id44;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	259532	259547	.	+	.	ID=id45;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;gbkey=repeat_region
NC_006570.2	RefSeq	gene	259568	260352	.	+	.	ID=gene252;Name=isftu1;Dbxref=GeneID:3190734;gbkey=Gene;gene=isftu1;locus_tag=FTT_0247
NC_006570.2	RefSeq	CDS	259568	259894	.	+	0	ID=cds215;Name=YP_169299.1;Parent=gene252;Note=ISFtu1. Transposase%2C member of the IS630 Tc-1 mariner family. Identical to Q93EJ6  transposase from Francisella tularensis %28118 aa%29 from aa 144-261. Identical to Q93EJ7  transposase from Francisella tularensis %28126 aa%29 from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF%27s. ORF1 %28identical to Q93EJ7%29 contains a programmed ribosomal frameshifting motif%2C 5%27-AAAAAAAG-3%27 at aa position 109 which permits frameshifting to ORF2 %28identical to Q93EJ6%29 to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family%2C and also mariner elements%2C show that this transposase shares strongly conserved residues%2C including a fully conserved dipeptide%2CAsp-Glu %28DE%29%2C and a block consisting of a fully conserved Asp and highly conserved Glu%2C separated by 34 or 35 residues %28D35E%29. The conserved dipeptide is only present if ribosomal frameshifting occurs.;Dbxref=UniProtKB%2FTrEMBL:Q5NIH2,Genbank:YP_169299.1,GeneID:3190734;gbkey=CDS;product=transposase;protein_id=YP_169299.1;transl_table=11
NC_006570.2	RefSeq	CDS	259894	260352	.	+	0	ID=cds215;Name=YP_169299.1;Parent=gene252;Note=ISFtu1. Transposase%2C member of the IS630 Tc-1 mariner family. Identical to Q93EJ6  transposase from Francisella tularensis %28118 aa%29 from aa 144-261. Identical to Q93EJ7  transposase from Francisella tularensis %28126 aa%29 from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF%27s. ORF1 %28identical to Q93EJ7%29 contains a programmed ribosomal frameshifting motif%2C 5%27-AAAAAAAG-3%27 at aa position 109 which permits frameshifting to ORF2 %28identical to Q93EJ6%29 to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family%2C and also mariner elements%2C show that this transposase shares strongly conserved residues%2C including a fully conserved dipeptide%2CAsp-Glu %28DE%29%2C and a block consisting of a fully conserved Asp and highly conserved Glu%2C separated by 34 or 35 residues %28D35E%29. The conserved dipeptide is only present if ribosomal frameshifting occurs.;Dbxref=UniProtKB%2FTrEMBL:Q5NIH2,Genbank:YP_169299.1,GeneID:3190734;gbkey=CDS;product=transposase;protein_id=YP_169299.1;transl_table=11
NC_006570.2	RefSeq	repeat_region	260440	260451	.	+	.	ID=id46;Note=ISFtu1 12bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	gene	260522	260893	.	+	.	ID=gene253;Name=FTT_0248;Dbxref=GeneID:3191328;gbkey=Gene;locus_tag=FTT_0248
NC_006570.2	RefSeq	CDS	260522	260893	.	+	0	ID=cds216;Name=YP_169300.1;Parent=gene253;Note=ORF ftt0248;Dbxref=UniProtKB%2FTrEMBL:Q5NI42,Genbank:YP_169300.1,GeneID:3191328;gbkey=CDS;product=hypothetical protein;protein_id=YP_169300.1;transl_table=11
NC_006570.2	RefSeq	gene	260994	263237	.	+	.	ID=gene254;Name=feoB;Dbxref=GeneID:3191885;gbkey=Gene;gene=feoB;locus_tag=FTT_0249
NC_006570.2	RefSeq	CDS	260994	263237	.	+	0	ID=cds217;Name=YP_169301.1;Parent=gene254;Note=Similar to Q8ZJH5 Ferrous iron transport protein B from Yersinia pestis %28771 aa%29. FASTA: opt: 1928 Z-score: 2034.7 E%28%29: 1.9e-105 Smith-Waterman score: 2307%3B 45.396 identity in 771 aa overlap;Dbxref=GOA:Q5NI41,InterPro:IPR011642,UniProtKB%2FTrEMBL:Q5NI41,Genbank:YP_169301.1,GeneID:3191885;gbkey=CDS;product=ferrous iron transport protein;protein_id=YP_169301.1;transl_table=11
NC_006570.2	RefSeq	gene	264049	266697	.	+	.	ID=gene255;Name=ppdK;Dbxref=GeneID:3191412;gbkey=Gene;gene=ppdK;locus_tag=FTT_0250
NC_006570.2	RefSeq	CDS	264049	266697	.	+	0	ID=cds218;Name=YP_169302.1;Parent=gene255;Note=catalyzes the formation of phosphoenolpyruvate from pyruvate;Dbxref=GOA:Q5NI40,InterPro:IPR018274,UniProtKB%2FTrEMBL:Q5NI40,Genbank:YP_169302.1,GeneID:3191412;gbkey=CDS;product=pyruvate phosphate dikinase;protein_id=YP_169302.1;transl_table=11
NC_006570.2	RefSeq	gene	267097	267984	.	+	.	ID=gene256;Name=ilvE;Dbxref=GeneID:3191569;gbkey=Gene;gene=ilvE;locus_tag=FTT_0251
NC_006570.2	RefSeq	CDS	267097	267984	.	+	0	ID=cds219;Name=YP_169303.1;Parent=gene256;Note=Similar to Q8Y1X0 Probable branched-chain amino acid aminotransferase protein from Ralstonia solanacearum %28309 aa%29. FASTA: opt: 706 Z-score: 903.1 E%28%29: 2.1e-42 Smith-Waterman score: 706%3B 39.931 identity in 288 aa overlap;Dbxref=GOA:Q5NI39,InterPro:IPR018300,UniProtKB%2FTrEMBL:Q5NI39,Genbank:YP_169303.1,GeneID:3191569;gbkey=CDS;product=branched-chain amino acid aminotransferase;protein_id=YP_169303.1;transl_table=11
NC_006570.2	RefSeq	gene	267995	269368	.	+	.	ID=gene257;Name=leuA;Dbxref=GeneID:3190775;gbkey=Gene;gene=leuA;locus_tag=FTT_0252
NC_006570.2	RefSeq	CDS	267995	269368	.	+	0	ID=cds220;Name=YP_169304.1;Parent=gene257;Note=Similar to Q9C5X5 2-isopropylmalate synthase from Arabidopsis thaliana %28503 aa%29. FASTA: opt: 493 Z-score: 601.2 E%28%29: 1.4e-25 Smith-Waterman score: 635%3B 31.373 identity in 408 aa overlap. This CDS is disrupted by the insertion of an ISFtu1 element occurring very near the C-terminal end. It is not clear whether this insertion affects the function of the protein;Dbxref=GOA:Q5NI38,InterPro:IPR013785,UniProtKB%2FTrEMBL:Q5NI38,Genbank:YP_169304.1,GeneID:3190775;gbkey=CDS;product=2-isopropylmalate synthase;protein_id=YP_169304.1;transl_table=11
NC_006570.2	RefSeq	repeat_region	269366	269377	.	-	.	ID=id47;Note=ISFtu1 12bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	gene	269465	270249	.	-	.	ID=gene258;Name=isftu1;Dbxref=GeneID:3191118;gbkey=Gene;gene=isftu1;locus_tag=FTT_0253c
NC_006570.2	RefSeq	CDS	269923	270249	.	-	0	ID=cds221;Name=YP_169305.1;Parent=gene258;Note=ISFtu1. Transposase%2C member of the IS630 Tc-1 mariner family. Identical to Q93EJ6  transposase from Francisella tularensis %28118 aa%29 from aa 144-261. Identical to Q93EJ7  transposase from Francisella tularensis %28126 aa%29 from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF%27s. ORF1 %28identical to Q93EJ7%29 contains a programmed ribosomal frameshifting motif%2C 5%27-AAAAAAAG-3%27 at aa position 109 which permits frameshifting to ORF2 %28identical to Q93EJ6%29 to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family%2C and also mariner elements%2C show that this transposase shares strongly conserved residues%2C including a fully conserved dipeptide%2CAsp-Glu %28DE%29%2C and a block consisting of a fully conserved Asp and highly conserved Glu%2C separated by 34 or 35 residues %28D35E%29. The conserved dipeptide is only present if ribosomal frameshifting occurs.;Dbxref=UniProtKB%2FTrEMBL:Q5NIH2,Genbank:YP_169305.1,GeneID:3191118;gbkey=CDS;product=transposase;protein_id=YP_169305.1;transl_table=11
NC_006570.2	RefSeq	CDS	269465	269923	.	-	0	ID=cds221;Name=YP_169305.1;Parent=gene258;Note=ISFtu1. Transposase%2C member of the IS630 Tc-1 mariner family. Identical to Q93EJ6  transposase from Francisella tularensis %28118 aa%29 from aa 144-261. Identical to Q93EJ7  transposase from Francisella tularensis %28126 aa%29 from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF%27s. ORF1 %28identical to Q93EJ7%29 contains a programmed ribosomal frameshifting motif%2C 5%27-AAAAAAAG-3%27 at aa position 109 which permits frameshifting to ORF2 %28identical to Q93EJ6%29 to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family%2C and also mariner elements%2C show that this transposase shares strongly conserved residues%2C including a fully conserved dipeptide%2CAsp-Glu %28DE%29%2C and a block consisting of a fully conserved Asp and highly conserved Glu%2C separated by 34 or 35 residues %28D35E%29. The conserved dipeptide is only present if ribosomal frameshifting occurs.;Dbxref=UniProtKB%2FTrEMBL:Q5NIH2,Genbank:YP_169305.1,GeneID:3191118;gbkey=CDS;product=transposase;protein_id=YP_169305.1;transl_table=11
NC_006570.2	RefSeq	repeat_region	270270	270285	.	-	.	ID=id48;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	270286	270301	.	-	.	ID=id49;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	270302	270313	.	-	.	ID=id50;Note=ISFtu1 12bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	gene	270392	270763	.	-	.	ID=gene259;Name=FTT_0254c;Dbxref=GeneID:3191325;gbkey=Gene;locus_tag=FTT_0254c
NC_006570.2	RefSeq	CDS	270392	270763	.	-	0	ID=cds222;Name=YP_169306.1;Parent=gene259;Note=ORF ftt0254c;Dbxref=UniProtKB%2FTrEMBL:Q5NI36,Genbank:YP_169306.1,GeneID:3191325;gbkey=CDS;product=hypothetical protein;protein_id=YP_169306.1;transl_table=11
NC_006570.2	RefSeq	gene	270756	271697	.	-	.	ID=gene260;Name=FTT_0255c;Dbxref=GeneID:3191326;gbkey=Gene;locus_tag=FTT_0255c
NC_006570.2	RefSeq	CDS	270756	271697	.	-	0	ID=cds223;Name=YP_169307.1;Parent=gene260;Note=ORF ftt0255c;Dbxref=UniProtKB%2FTrEMBL:Q5NI35,Genbank:YP_169307.1,GeneID:3191326;gbkey=CDS;product=hypothetical protein;protein_id=YP_169307.1;transl_table=11
NC_006570.2	RefSeq	gene	272034	273002	.	-	.	ID=gene261;Name=FTT_0256c;Dbxref=GeneID:3191322;gbkey=Gene;locus_tag=FTT_0256c
NC_006570.2	RefSeq	CDS	272034	273002	.	-	0	ID=cds224;Name=YP_169308.1;Parent=gene261;Note=Similar to Q87T79  lipopolysaccharide A protein from Vibrio parahaemolyticus %28311 aa%29. FASTA: opt: 835 Z-score: 996.3 E%28%29: 1.3e-47 Smith-Waterman score: 910%3B 43.671 identity in 316 aa overlap ORF ftt0256c;Dbxref=InterPro:IPR006598,UniProtKB%2FTrEMBL:Q5NI34,Genbank:YP_169308.1,GeneID:3191322;gbkey=CDS;product=lipopolysaccharide protein;protein_id=YP_169308.1;transl_table=11
NC_006570.2	RefSeq	gene	273191	275047	.	+	.	ID=gene262;Name=FTT_0257;Dbxref=GeneID:3191323;gbkey=Gene;locus_tag=FTT_0257
NC_006570.2	RefSeq	CDS	273191	275047	.	+	0	ID=cds225;Name=YP_169309.1;Parent=gene262;Note=Similar to Q8YNW1 Ribonuclease II family protein from Anabaena sp. %28686 aa%29. FASTA: opt: 557 Z-score: 649.1 E%28%29: 2.9e-28 Smith-Waterman score: 763%3B 28.290 identity in 661 aa overlap ORF ftt0257;Dbxref=GOA:Q5NI33,InterPro:IPR001900,UniProtKB%2FTrEMBL:Q5NI33,Genbank:YP_169309.1,GeneID:3191323;gbkey=CDS;product=ribonuclease II family protein;protein_id=YP_169309.1;transl_table=11
NC_006570.2	RefSeq	gene	275378	276046	.	+	.	ID=gene263;Name=FTT_0258;Dbxref=GeneID:3191320;gbkey=Gene;locus_tag=FTT_0258
NC_006570.2	RefSeq	CDS	275378	276046	.	+	0	ID=cds226;Name=YP_169310.1;Parent=gene263;Note=Similar to Q83AC9 Carboxylesterase%2Fphospholipase family protein from Coxiella burnetii %28200 aa%29. FASTA: opt: 599 Z-score: 736.0 E%28%29: 4.2e-33 Smith-Waterman score: 599%3B 45.813 identity in 203 aa overlap ORF ftt0258;Dbxref=GOA:Q5NI32,InterPro:IPR003140,UniProtKB%2FTrEMBL:Q5NI32,Genbank:YP_169310.1,GeneID:3191320;gbkey=CDS;product=carboxylesterase%2Fphospholipase family protein;protein_id=YP_169310.1;transl_table=11
NC_006570.2	RefSeq	gene	276043	276945	.	+	.	ID=gene264;Name=hemC;Dbxref=GeneID:3192416;gbkey=Gene;gene=hemC;locus_tag=FTT_0259
NC_006570.2	RefSeq	CDS	276043	276945	.	+	0	ID=cds227;Name=YP_169311.1;Parent=gene264;Note=transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis;Dbxref=GOA:Q5NI31,InterPro:IPR000860,UniProtKB%2FSwiss-Prot:Q5NI31,Genbank:YP_169311.1,GeneID:3192416;gbkey=CDS;product=porphobilinogen deaminase;protein_id=YP_169311.1;transl_table=11
NC_006570.2	RefSeq	gene	276946	277338	.	+	.	ID=gene265;Name=crcB;Dbxref=GeneID:3191891;gbkey=Gene;gene=crcB;locus_tag=FTT_0260
NC_006570.2	RefSeq	CDS	276946	277338	.	+	0	ID=cds228;Name=YP_169312.1;Parent=gene265;Note=may be involved in chromosome condensation%3B overexpression in Escherichia coli protects against decondensation by camphor%3B overexpressing the protein results in an increase in supercoiling;Dbxref=GOA:Q5NI30,InterPro:IPR003691,UniProtKB%2FSwiss-Prot:Q5NI30,Genbank:YP_169312.1,GeneID:3191891;gbkey=CDS;product=camphor resistance protein CrcB;protein_id=YP_169312.1;transl_table=11
NC_006570.2	RefSeq	gene	277335	277742	.	+	.	ID=gene266;Name=FTT_0261;Dbxref=GeneID:3191319;gbkey=Gene;locus_tag=FTT_0261
NC_006570.2	RefSeq	CDS	277335	277742	.	+	0	ID=cds229;Name=YP_169313.1;Parent=gene266;Note=The predicted signal peptide are in conflict with the membrane lipoprotein lipid attachment site ORF ftt0261;Dbxref=UniProtKB%2FTrEMBL:Q5NI29,Genbank:YP_169313.1,GeneID:3191319;gbkey=CDS;product=hypothetical protein;protein_id=YP_169313.1;transl_table=11
NC_006570.2	RefSeq	gene	277882	278019	.	+	.	ID=gene267;Name=FTT_0262;Dbxref=GeneID:3191318;gbkey=Gene;locus_tag=FTT_0262
NC_006570.2	RefSeq	CDS	277882	278019	.	+	0	ID=cds230;Name=YP_169314.1;Parent=gene267;Note=The predicted signal peptide and the membrane lipoprotein lipid attachment site are in conflict with each other ORF ftt0262;Dbxref=UniProtKB%2FTrEMBL:Q5NI28,Genbank:YP_169314.1,GeneID:3191318;gbkey=CDS;product=lipoprotein;protein_id=YP_169314.1;transl_table=11
NC_006570.2	RefSeq	gene	278072	278452	.	+	.	ID=gene268;Name=FTT_0263;Dbxref=GeneID:3191317;gbkey=Gene;locus_tag=FTT_0263
NC_006570.2	RefSeq	CDS	278072	278452	.	+	0	ID=cds231;Name=YP_169315.1;Parent=gene268;Note=ORF ftt0263;Dbxref=InterPro:IPR017441,UniProtKB%2FTrEMBL:Q5NI27,Genbank:YP_169315.1,GeneID:3191317;gbkey=CDS;product=hypothetical protein;protein_id=YP_169315.1;transl_table=11
NC_006570.2	RefSeq	gene	278449	278622	.	-	.	ID=gene269;Name=FTT_0264c;Dbxref=GeneID:3191308;gbkey=Gene;locus_tag=FTT_0264c
NC_006570.2	RefSeq	CDS	278449	278622	.	-	0	ID=cds232;Name=YP_169316.1;Parent=gene269;Note=Similar to Q8Y1X1 Hypothetical protein RSc0566 from Ralstonia solancearum %2865 aa%29. FASTA: opt: 160 Z-score: 236.6 E%28%29: 2.5e-05 Smith-Waterman score: 160%3B 50.000 identity in 36 aa overlap ORF ftt0264c;Dbxref=UniProtKB%2FTrEMBL:Q5NI26,Genbank:YP_169316.1,GeneID:3191308;gbkey=CDS;product=hypothetical protein;protein_id=YP_169316.1;transl_table=11
NC_006570.2	RefSeq	gene	278751	280550	.	+	.	ID=gene270;Name=FTT_0265;Dbxref=GeneID:3191316;gbkey=Gene;locus_tag=FTT_0265
NC_006570.2	RefSeq	CDS	278751	280550	.	+	0	ID=cds233;Name=YP_169317.1;Parent=gene270;Note=Similar to Q83AV7 ABC transporter%2Cpermease protein from Coxiella burnetii %28581 aa%29. FASTA: opt: 976 Z-score: 1115.9 E%28%29: 2.9e-54 Smith-Waterman score: 1738%3B 45.318 identity in 598 aa overlap ORF ftt0265;Dbxref=GOA:Q5NI25,InterPro:IPR000515,UniProtKB%2FTrEMBL:Q5NI25,Genbank:YP_169317.1,GeneID:3191316;gbkey=CDS;product=ABC transporter membrane protein;protein_id=YP_169317.1;transl_table=11
NC_006570.2	RefSeq	gene	280569	281885	.	+	.	ID=gene271;Name=FTT_0266;Dbxref=GeneID:3191315;gbkey=Gene;locus_tag=FTT_0266
NC_006570.2	RefSeq	CDS	280569	281885	.	+	0	ID=cds234;Name=YP_169318.1;Parent=gene271;Note=Similar to Q83AV8 ABC transporter%2C ATP-binding protein from Coxiella burnetii %28432 aa%29. FASTA: opt: 1556 Z-score: 1713.5 E%28%29: 1.5e-87 Smith-Waterman score: 1556%3B 54.673 identity in 428 aa overlap ORF ftt0266;Dbxref=GOA:Q5NI24,InterPro:IPR018632,UniProtKB%2FTrEMBL:Q5NI24,Genbank:YP_169318.1,GeneID:3191315;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=YP_169318.1;transl_table=11
NC_006570.2	RefSeq	gene	282010	283128	.	+	.	ID=gene272;Name=FTT_0267;Dbxref=GeneID:3191314;gbkey=Gene;locus_tag=FTT_0267
NC_006570.2	RefSeq	CDS	282010	283128	.	+	0	ID=cds235;Name=YP_169319.1;Parent=gene272;Note=ORF ftt0267;Dbxref=UniProtKB%2FTrEMBL:Q5NI23,Genbank:YP_169319.1,GeneID:3191314;gbkey=CDS;product=hypothetical protein;protein_id=YP_169319.1;transl_table=11
NC_006570.2	RefSeq	gene	283222	285108	.	+	.	ID=gene273;Name=FTT_0268;Dbxref=GeneID:3191312;gbkey=Gene;locus_tag=FTT_0268
NC_006570.2	RefSeq	CDS	283222	285108	.	+	0	ID=cds236;Name=YP_169320.1;Parent=gene273;Note=Similar to Q88MV1 Sodium%2Fhydrogen exchanger family protein from Pseudomonas putida %28601 aa%29. FASTA: opt: 1318 Z-score: 1419.4 E%28%29: 3.6e-71 Smith-Waterman score: 1318%3B 37.993 identity in 608 aa overlap ORF ftt0268;Dbxref=GOA:Q5NI22,InterPro:IPR016040,UniProtKB%2FTrEMBL:Q5NI22,Genbank:YP_169320.1,GeneID:3191312;gbkey=CDS;product=Sodium%2Fhydrogen exchanger %28antiporter%29 family protein;protein_id=YP_169320.1;transl_table=11
NC_006570.2	RefSeq	gene	285093	285632	.	+	.	ID=gene274;Name=FTT_0269;Dbxref=GeneID:3191311;gbkey=Gene;locus_tag=FTT_0269
NC_006570.2	RefSeq	CDS	285093	285632	.	+	0	ID=cds237;Name=YP_169321.1;Parent=gene274;Note=Similar to Q8EKP8 Carbonic anhydrase%2Cfamily 3 from Shewanella oneidensis %28182 aa%29. FASTA: opt: 639 Z-score: 840.8 E%28%29: 6.1e-39 Smith-Waterman score: 639%3B 50.000 identity in 178 aa overlap ORF ftt0269;Dbxref=GOA:Q5NI21,InterPro:IPR001451,UniProtKB%2FTrEMBL:Q5NI21,Genbank:YP_169321.1,GeneID:3191311;gbkey=CDS;product=carbonic anhydrase;protein_id=YP_169321.1;transl_table=11
NC_006570.2	RefSeq	gene	285583	286218	.	+	.	ID=gene275;Name=lolB;Dbxref=GeneID:3191459;gbkey=Gene;gene=lolB;locus_tag=FTT_0270
NC_006570.2	RefSeq	CDS	285583	286218	.	+	0	ID=cds238;Name=YP_169322.1;Parent=gene275;Note=Similar to Q83AQ2 Outer membrane lipoprotein LolB%2C from Coxiella burnetii %28210 aa%29. FASTA: opt: 395 Z-score: 508.7 E%28%29: 1.9e-20 Smith-Waterman score: 395%3B 33.668 identity in 199 aa overlap;Dbxref=GOA:Q5NI20,InterPro:IPR004565,UniProtKB%2FSwiss-Prot:Q5NI20,Genbank:YP_169322.1,GeneID:3191459;gbkey=CDS;product=lipoprotein releasing system%2C subunit B%2C outer membrane lipoprotein;protein_id=YP_169322.1;transl_table=11
NC_006570.2	RefSeq	gene	286206	287033	.	+	.	ID=gene276;Name=ipk;Dbxref=GeneID:3190842;gbkey=Gene;gene=ipk;locus_tag=FTT_0271
NC_006570.2	RefSeq	CDS	286206	287033	.	+	0	ID=cds239;Name=YP_169323.1;Parent=gene276;Note=An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis;Dbxref=GOA:Q5NI19,InterPro:IPR014721,UniProtKB%2FSwiss-Prot:Q5NI19,Genbank:YP_169323.1,GeneID:3190842;gbkey=CDS;product=4-diphosphocytidyl-2-C-methyl-D-erythritol kinase;protein_id=YP_169323.1;transl_table=11
NC_006570.2	RefSeq	gene	287053	287127	.	+	.	ID=gene277;Name=tRNA-Gln %28TTG%29;Dbxref=GeneID:3192228;description=tRNA-Gln %28TTG%29;gbkey=Gene;gene=tRNA-Gln %28TTG%29;locus_tag=FTT_t07
NC_006570.2	RefSeq	tRNA	287053	287127	.	+	.	ID=rna6;Dbxref=GeneID:3192228;codons=26;gbkey=tRNA;product=tRNA-Gln
NC_006570.2	RefSeq	exon	287053	287127	.	+	.	ID=id51;Parent=rna6;Dbxref=GeneID:3192228;codons=26;gbkey=tRNA;product=tRNA-Gln
NC_006570.2	RefSeq	gene	287222	287542	.	+	.	ID=gene278;Name=FTT_0272;Dbxref=GeneID:3191309;gbkey=Gene;locus_tag=FTT_0272
NC_006570.2	RefSeq	CDS	287222	287542	.	+	0	ID=cds240;Name=YP_169324.1;Parent=gene278;Note=ORF ftt0272;Dbxref=UniProtKB%2FTrEMBL:Q5NI18,Genbank:YP_169324.1,GeneID:3191309;gbkey=CDS;product=hypothetical protein;protein_id=YP_169324.1;transl_table=11
NC_006570.2	RefSeq	repeat_region	287502	287513	.	+	.	ID=id52;Note=ISFtu1 12bp terminal inverted repeat;Dbxref=GeneID:3191309;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	287514	287529	.	+	.	ID=id53;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;Dbxref=GeneID:3191309;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	287530	287545	.	+	.	ID=id54;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;gbkey=repeat_region
NC_006570.2	RefSeq	gene	287566	288350	.	+	.	ID=gene279;Name=isftu1;Dbxref=GeneID:3191277;gbkey=Gene;gene=isftu1;locus_tag=FTT_0273
NC_006570.2	RefSeq	CDS	287566	287892	.	+	0	ID=cds241;Name=YP_169325.1;Parent=gene279;Note=ISFtu1. Transposase%2C member of the IS630 Tc-1 mariner family. Identical to Q93EJ6  transposase from Francisella tularensis %28118 aa%29 from aa 144-261. Identical to Q93EJ7  transposase from Francisella tularensis %28126 aa%29 from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF%27s. ORF1 %28identical to Q93EJ7%29 contains a programmed ribosomal frameshifting motif%2C 5%27-AAAAAAAG-3%27 at aa position 109 which permits frameshifting to ORF2 %28identical to Q93EJ6%29 to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family%2C and also mariner elements%2C show that this transposase shares strongly conserved residues%2C including a fully conserved dipeptide%2CAsp-Glu %28DE%29%2C and a block consisting of a fully conserved Asp and highly conserved Glu%2C separated by 34 or 35 residues %28D35E%29. The conserved dipeptide is only present if ribosomal frameshifting occurs.;Dbxref=UniProtKB%2FTrEMBL:Q5NIH2,Genbank:YP_169325.1,GeneID:3191277;gbkey=CDS;product=transposase;protein_id=YP_169325.1;transl_table=11
NC_006570.2	RefSeq	CDS	287892	288350	.	+	0	ID=cds241;Name=YP_169325.1;Parent=gene279;Note=ISFtu1. Transposase%2C member of the IS630 Tc-1 mariner family. Identical to Q93EJ6  transposase from Francisella tularensis %28118 aa%29 from aa 144-261. Identical to Q93EJ7  transposase from Francisella tularensis %28126 aa%29 from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF%27s. ORF1 %28identical to Q93EJ7%29 contains a programmed ribosomal frameshifting motif%2C 5%27-AAAAAAAG-3%27 at aa position 109 which permits frameshifting to ORF2 %28identical to Q93EJ6%29 to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family%2C and also mariner elements%2C show that this transposase shares strongly conserved residues%2C including a fully conserved dipeptide%2CAsp-Glu %28DE%29%2C and a block consisting of a fully conserved Asp and highly conserved Glu%2C separated by 34 or 35 residues %28D35E%29. The conserved dipeptide is only present if ribosomal frameshifting occurs.;Dbxref=UniProtKB%2FTrEMBL:Q5NIH2,Genbank:YP_169325.1,GeneID:3191277;gbkey=CDS;product=transposase;protein_id=YP_169325.1;transl_table=11
NC_006570.2	RefSeq	repeat_region	288438	288449	.	+	.	ID=id55;Note=ISFtu1 12bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	gene	288464	288682	.	+	.	ID=gene280;Name=FTT_0274;Dbxref=GeneID:3191307;gbkey=Gene;locus_tag=FTT_0274
NC_006570.2	RefSeq	CDS	288464	288682	.	+	0	ID=cds242;Name=YP_169326.1;Parent=gene280;Note=ORF ftt0274;Dbxref=UniProtKB%2FTrEMBL:Q5NI16,Genbank:YP_169326.1,GeneID:3191307;gbkey=CDS;product=hypothetical protein;protein_id=YP_169326.1;transl_table=11
NC_006570.2	RefSeq	gene	288731	289543	.	-	.	ID=gene281;Name=FTT_0275c;Dbxref=GeneID:3191306;gbkey=Gene;locus_tag=FTT_0275c;pseudo=true
NC_006570.2	RefSeq	gene	289614	290349	.	-	.	ID=gene282;Name=FTT_0276c;Dbxref=GeneID:3191303;gbkey=Gene;locus_tag=FTT_0276c;pseudo=true
NC_006570.2	RefSeq	gene	290427	290525	.	-	.	ID=gene283;Name=FTT_0277c;Dbxref=GeneID:3191304;gbkey=Gene;locus_tag=FTT_0277c
NC_006570.2	RefSeq	CDS	290427	290525	.	-	0	ID=cds243;Name=YP_169327.1;Parent=gene283;Note=Similar to Q937K9 YbgT protein from Erwinia chrysanthemi %2838 aa%29. FASTA: opt: 81 Z-score: 153.9 E%28%29: 1 Smith-Waterman score: 81%3B 42.857 identity in 28 aa overlap ORF ftt0277c;Dbxref=InterPro:IPR012994,UniProtKB%2FTrEMBL:Q5NI15,Genbank:YP_169327.1,GeneID:3191304;gbkey=CDS;product=hypothetical protein;protein_id=YP_169327.1;transl_table=11
NC_006570.2	RefSeq	gene	290541	291734	.	-	.	ID=gene284;Name=cydB;Dbxref=GeneID:3191907;gbkey=Gene;gene=cydB;locus_tag=FTT_0278c
NC_006570.2	RefSeq	CDS	290541	291734	.	-	0	ID=cds244;Name=YP_169328.1;Parent=gene284;Note=Similar to AAO69749 %28Q8XGM0%29 Cytochrome d ubiquinol oxidase subunit II from Salmonella typhi %28379 aa%29. FASTA: opt: 645 Z-score: 711.2 E%28%29: 1e-31 Smith-Waterman score: 1022%3B 40.506identity in 395 aa overlap;Dbxref=GOA:Q5NI14,InterPro:IPR003317,UniProtKB%2FTrEMBL:Q5NI14,Genbank:YP_169328.1,GeneID:3191907;gbkey=CDS;product=cytochrome d terminal oxidase%2C polypeptide subunit II;protein_id=YP_169328.1;transl_table=11
NC_006570.2	RefSeq	gene	291745	293523	.	-	.	ID=gene285;Name=cydA;Dbxref=GeneID:3191902;gbkey=Gene;gene=cydA;locus_tag=FTT_0279c
NC_006570.2	RefSeq	CDS	291745	293523	.	-	0	ID=cds245;Name=YP_169329.1;Parent=gene285;Note=Similar to AAP96534 %28Q7VKT6%29 Cytochrome D ubiquinol oxidase%2C subunit I from Haemophilus ducreyi %28516 aa%29. FASTA: opt: 1311 Z-score: 1457.7 E%28%29: 2.7e-73 Smith-Waterman score: 1688%3B 47.478identity in 575 aa overlap Schu S4 seems to have extra sequence in between 340-420 aa;Dbxref=GOA:Q5NI13,InterPro:IPR002585,UniProtKB%2FTrEMBL:Q5NI13,Genbank:YP_169329.1,GeneID:3191902;gbkey=CDS;product=cytochrome d terminal oxidase%2C polypeptide subunit I;protein_id=YP_169329.1;transl_table=11
NC_006570.2	RefSeq	gene	293952	295319	.	-	.	ID=gene286;Name=yajR;Dbxref=GeneID:3192130;gbkey=Gene;gene=yajR;locus_tag=FTT_0280c
NC_006570.2	RefSeq	CDS	293952	295319	.	-	0	ID=cds246;Name=YP_169330.1;Parent=gene286;Note=Similar to AAO89830 %28Q83EP3%29 Major facilitator family transporter from Coxiella burnetii %28458 aa%29. FASTA: opt: 1379 Z-score: 1410.6 E%28%29: 1.1e-70 Smith-Waterman score: 1379%3B 46.102 identity in 449 aa overlap;Dbxref=GOA:Q5NI12,InterPro:IPR011701,UniProtKB%2FTrEMBL:Q5NI12,Genbank:YP_169330.1,GeneID:3192130;gbkey=CDS;product=major facilitator transporter;protein_id=YP_169330.1;transl_table=11
NC_006570.2	RefSeq	gene	295680	296582	.	+	.	ID=gene287;Name=cyoA;Dbxref=GeneID:3191910;gbkey=Gene;gene=cyoA;locus_tag=FTT_0281
NC_006570.2	RefSeq	CDS	295680	296582	.	+	0	ID=cds247;Name=YP_169331.1;Parent=gene287;Note=Similar to Q87DQ7 Cytochrome O ubiquinol oxidase subunit II from Xylella fastidiosa %28319 aa%29. FASTA: opt: 956 Z-score: 1145.6 E%28%29: 6.4e-56 Smith-Waterman score: 956%3B 49.477 identity in 287 aa overlap;Dbxref=GOA:Q5NI11,InterPro:IPR012141,UniProtKB%2FTrEMBL:Q5NI11,Genbank:YP_169331.1,GeneID:3191910;gbkey=CDS;product=cytochrome O ubiquinol oxidase subunit II;protein_id=YP_169331.1;transl_table=11
NC_006570.2	RefSeq	gene	296621	298651	.	+	.	ID=gene288;Name=cyoB;Dbxref=GeneID:3191917;gbkey=Gene;gene=cyoB;locus_tag=FTT_0282
NC_006570.2	RefSeq	CDS	296621	298651	.	+	0	ID=cds248;Name=YP_169332.1;Parent=gene288;Note=Similar to AAO70008 %28Q8XG02%29 Cytochrome o ubiquinol oxidase subunit I from Salmonella typhi %28663 aa%29. FASTA: opt: 3045 Z-score: 3221.2 E%28%29: 1.6e-171 Smith-Waterman score: 3045%3B 64.361identity in 665 aa overlap;Dbxref=GOA:Q5NI10,InterPro:IPR014207,UniProtKB%2FTrEMBL:Q5NI10,Genbank:YP_169332.1,GeneID:3191917;gbkey=CDS;product=cytochrome O ubiquinol oxidase subunit I;protein_id=YP_169332.1;transl_table=11
NC_006570.2	RefSeq	gene	298648	299250	.	+	.	ID=gene289;Name=cyoC;Dbxref=GeneID:3191921;gbkey=Gene;gene=cyoC;locus_tag=FTT_0283
NC_006570.2	RefSeq	CDS	298648	299250	.	+	0	ID=cds249;Name=YP_169333.1;Parent=gene289;Note=Similar to Q87IH7 Cytochrome o ubiquinol oxidase%2C subunit III from Vibrio parahaemolyticus %28200 aa%29. FASTA: opt: 768 Z-score: 931.9 E%28%29: 5.1e-44 Smith-Waterman score: 768%3B 55.276identity in 199 aa overlap;Dbxref=GOA:Q5NI09,InterPro:IPR014206,UniProtKB%2FTrEMBL:Q5NI09,Genbank:YP_169333.1,GeneID:3191921;gbkey=CDS;product=cytochrome O ubiquinol oxidase%2C subunit III;protein_id=YP_169333.1;transl_table=11
NC_006570.2	RefSeq	gene	299252	299584	.	+	.	ID=gene290;Name=cyoD;Dbxref=GeneID:3191924;gbkey=Gene;gene=cyoD;locus_tag=FTT_0284
NC_006570.2	RefSeq	CDS	299252	299584	.	+	0	ID=cds250;Name=YP_169334.1;Parent=gene290;Note=Similar to Q8ZC55 Cytochrome O ubiquinol oxidase subunit IV from Yersinia pestis %28110 aa%29. FASTA: opt: 325 Z-score: 419.7 E%28%29: 1.7e-15 Smith-Waterman score: 325%3B 50.505 identity in 99 aa overlap;Dbxref=GOA:Q5NI08,InterPro:IPR014210,UniProtKB%2FTrEMBL:Q5NI08,Genbank:YP_169334.1,GeneID:3191924;gbkey=CDS;product=cytochrome O ubiquinol oxidase subunit IV;protein_id=YP_169334.1;transl_table=11
NC_006570.2	RefSeq	gene	299615	300463	.	+	.	ID=gene291;Name=cyoE;Dbxref=GeneID:3192388;gbkey=Gene;gene=cyoE;locus_tag=FTT_0285
NC_006570.2	RefSeq	CDS	299615	300463	.	+	0	ID=cds251;Name=YP_169335.1;Parent=gene291;Note=converts protoheme IX and farnesyl diphosphate to heme O;Dbxref=GOA:Q5NI07,InterPro:IPR006369,UniProtKB%2FSwiss-Prot:Q5NI07,Genbank:YP_169335.1,GeneID:3192388;gbkey=CDS;product=protoheme IX farnesyltransferase;protein_id=YP_169335.1;transl_table=11
NC_006570.2	RefSeq	gene	300608	301651	.	-	.	ID=gene292;Name=lpxD2;Dbxref=GeneID:3190871;gbkey=Gene;gene=lpxD2;locus_tag=FTT_0286c
NC_006570.2	RefSeq	CDS	300608	301651	.	-	0	ID=cds252;Name=YP_169336.1;Parent=gene292;Note=Similar to Q8A014 UDP-3-O-%5B3-hydroxymyristoyl%5D glucosamine N-acyltransferase from Bacteroides thetaiotaomicron %28346 aa%29. FASTA: opt: 687 Z-score: 795.8 E%28%29: 2e-36 Smith-Waterman score: 687%3B 33.431 identity in 341 aa overlap paralog of FTT1571;Dbxref=GOA:Q5NI06,InterPro:IPR018357,UniProtKB%2FSwiss-Prot:Q5NI06,Genbank:YP_169336.1,GeneID:3190871;gbkey=CDS;product=UDP-3-O-%5B3-hydroxymyristoyl%5D glucosamine N-acyltransferase;protein_id=YP_169336.1;transl_table=11
NC_006570.2	RefSeq	gene	301719	302414	.	-	.	ID=gene293;Name=FTT_0287c;Dbxref=GeneID:3191302;gbkey=Gene;locus_tag=FTT_0287c
NC_006570.2	RefSeq	CDS	301719	302414	.	-	0	ID=cds253;Name=YP_169337.1;Parent=gene293;Note=Similar to Q8XIW2 Hypothetical protein CPE2001 from Clostridium perfringens %28229 aa%29. FASTA: opt: 806 Z-score: 994.2 E%28%29: 1.7e-47 Smith-Waterman score: 806%3B 51.948 identity in 231 aa overlap ORF ftt0287c;Dbxref=InterPro:IPR006638,UniProtKB%2FTrEMBL:Q5NI05,Genbank:YP_169337.1,GeneID:3191302;gbkey=CDS;product=hypothetical protein;protein_id=YP_169337.1;transl_table=11
NC_006570.2	RefSeq	gene	302414	303265	.	-	.	ID=gene294;Name=pdxY;Dbxref=GeneID:3191321;gbkey=Gene;gene=pdxY;locus_tag=FTT_0288c
NC_006570.2	RefSeq	CDS	302414	303265	.	-	0	ID=cds254;Name=YP_169338.1;Parent=gene294;Note=Similar to Q8D4Q2 Pyridoxal%2Fpyridoxine%2Fpyridoxamine kinase from Vibrio vulnificus %28290 aa%29. FASTA: opt: 611 Z-score: 766.0 E%28%29: 8.9e-35 Smith-Waterman score: 611%3B 38.545identity in 275 aa overlap;Dbxref=GOA:Q5NI04,InterPro:IPR013749,UniProtKB%2FTrEMBL:Q5NI04,Genbank:YP_169338.1,GeneID:3191321;gbkey=CDS;product=pyridoxal kinase;protein_id=YP_169338.1;transl_table=11
NC_006570.2	RefSeq	gene	303272	303706	.	-	.	ID=gene295;Name=FTT_0289c;Dbxref=GeneID:3191300;gbkey=Gene;locus_tag=FTT_0289c
NC_006570.2	RefSeq	CDS	303272	303706	.	-	0	ID=cds255;Name=YP_169339.1;Parent=gene295;Note=ORF ftt0289c;Dbxref=UniProtKB%2FTrEMBL:Q5NI03,Genbank:YP_169339.1,GeneID:3191300;gbkey=CDS;product=hypothetical protein;protein_id=YP_169339.1;transl_table=11
NC_006570.2	RefSeq	gene	303852	304808	.	+	.	ID=gene296;Name=moxR;Dbxref=GeneID:3192009;gbkey=Gene;gene=moxR;locus_tag=FTT_0290
NC_006570.2	RefSeq	CDS	303852	304808	.	+	0	ID=cds256;Name=YP_169340.1;Parent=gene296;Note=Similar to Q87YN6 MoxR protein%2C %2C from Pseudomonas syringae %28319 aa%29. FASTA: opt: 1309 Z-score: 1518.5 E%28%29: 9.9e-77 Smith-Waterman score: 1309%3B 61.489 identity in 309 aa overlap;Dbxref=GOA:Q5NI02,InterPro:IPR016366,UniProtKB%2FTrEMBL:Q5NI02,Genbank:YP_169340.1,GeneID:3192009;gbkey=CDS;product=methanol dehydrogenase regulatory protein;protein_id=YP_169340.1;transl_table=11
NC_006570.2	RefSeq	gene	304821	305732	.	+	.	ID=gene297;Name=FTT_0291;Dbxref=GeneID:3191299;gbkey=Gene;locus_tag=FTT_0291
NC_006570.2	RefSeq	CDS	304821	305732	.	+	0	ID=cds257;Name=YP_169341.1;Parent=gene297;Note=Similar to Q87YN5 Conserved hypothetical protein from Pseudomonas syringae %28314 aa%29. FASTA: opt: 561 Z-score: 693.3 bits: 136.4 E%28%29: 1e-30 Smith-Waterman score: 561%3B 30.479 identity in 292 aa overlap ORF ftt0291;Dbxref=InterPro:IPR002881,UniProtKB%2FTrEMBL:Q5NI01,Genbank:YP_169341.1,GeneID:3191299;gbkey=CDS;product=hypothetical protein;protein_id=YP_169341.1;transl_table=11
NC_006570.2	RefSeq	gene	305722	306198	.	+	.	ID=gene298;Name=FTT_0292;Dbxref=GeneID:3191297;gbkey=Gene;locus_tag=FTT_0292
NC_006570.2	RefSeq	CDS	305722	306198	.	+	0	ID=cds258;Name=YP_169342.1;Parent=gene298;Note=Similar to Q8D3W9 Conserved hypothetical protein from Vibrio vulnificus %28156 aa%29. FASTA: opt: 228 Z-score: 276.8 E%28%29: 1.5e-07 Smith-Waterman score: 228%3B 28.481 identity in 158 aa overlap ORF ftt0292;Dbxref=UniProtKB%2FTrEMBL:Q5NI00,Genbank:YP_169342.1,GeneID:3191297;gbkey=CDS;product=hypothetical protein;protein_id=YP_169342.1;transl_table=11
NC_006570.2	RefSeq	gene	306177	307196	.	+	.	ID=gene299;Name=FTT_0293;Dbxref=GeneID:3191295;gbkey=Gene;locus_tag=FTT_0293
NC_006570.2	RefSeq	CDS	306177	307196	.	+	0	ID=cds259;Name=YP_169343.1;Parent=gene299;Note=Similar to Q88LA6 Von Willebrand factor type A domain protein from Pseuodmonas putida %28358 aa%29. FASTA: opt: 905 Z-score: 1015.4 E%28%29: 1.1e-48 Smith-Waterman score: 905%3B 45.122 identity in 328 aa overlap ORF ftt0293;Dbxref=InterPro:IPR002035,UniProtKB%2FTrEMBL:Q5NHZ9,Genbank:YP_169343.1,GeneID:3191295;gbkey=CDS;product=hypothetical protein;protein_id=YP_169343.1;transl_table=11
NC_006570.2	RefSeq	gene	307198	308999	.	+	.	ID=gene300;Name=FTT_0294;Dbxref=GeneID:3191296;gbkey=Gene;locus_tag=FTT_0294;pseudo=true
NC_006570.2	RefSeq	gene	308992	310617	.	+	.	ID=gene301;Name=FTT_0295;Dbxref=GeneID:3191293;gbkey=Gene;locus_tag=FTT_0295
NC_006570.2	RefSeq	CDS	308992	310617	.	+	0	ID=cds260;Name=YP_169344.1;Parent=gene301;Note=Similar to Q8ECP0 Conserved hypothetical protein from Shewanella oneidensis %28555 aa%29. FASTA: opt: 529 Z-score: 628.4 E%28%29: 4.1e-27 Smith-Waterman score: 529%3B 24.371 identity in 517 aa overlap ORF ftt0295;Dbxref=UniProtKB%2FTrEMBL:Q5NHZ8,Genbank:YP_169344.1,GeneID:3191293;gbkey=CDS;product=hypothetical protein;protein_id=YP_169344.1;transl_table=11
NC_006570.2	RefSeq	gene	310618	311295	.	+	.	ID=gene302;Name=pcp;Dbxref=GeneID:3191452;gbkey=Gene;gene=pcp;locus_tag=FTT_0296
NC_006570.2	RefSeq	CDS	310618	311295	.	+	0	ID=cds261;Name=YP_169345.1;Parent=gene302;Note=Similar to PCP_CLOPE %28Q8XKH1%29 Pyrrolidone-carboxylate peptidase from Clostridium perfringens %28215 aa%29. FASTA: opt: 710 Z-score: 844.3 E%28%29: 3.9e-39 Smith-Waterman score: 710%3B 52.020identity in 198 aa overlap;Dbxref=GOA:Q5NHZ7,InterPro:IPR016125,UniProtKB%2FTrEMBL:Q5NHZ7,Genbank:YP_169345.1,GeneID:3191452;gbkey=CDS;product=pyrrolidone-carboxylate peptidase;protein_id=YP_169345.1;transl_table=11
NC_006570.2	RefSeq	gene	311303	311785	.	+	.	ID=gene303;Name=FTT_0297;Dbxref=GeneID:3191292;gbkey=Gene;locus_tag=FTT_0297
NC_006570.2	RefSeq	CDS	311303	311785	.	+	0	ID=cds262;Name=YP_169346.1;Parent=gene303;Note=ORF ftt0297;Dbxref=UniProtKB%2FTrEMBL:Q5NHZ6,Genbank:YP_169346.1,GeneID:3191292;gbkey=CDS;product=cytochrome c-type biogenesis protein;protein_id=YP_169346.1;transl_table=11
NC_006570.2	RefSeq	gene	311816	312256	.	+	.	ID=gene304;Name=holC;Dbxref=GeneID:3192526;gbkey=Gene;gene=holC;locus_tag=FTT_0298
NC_006570.2	RefSeq	CDS	311816	312256	.	+	0	ID=cds263;Name=YP_169347.1;Parent=gene304;Note=Similar to Q8XWQ9 Probable DNA polymerase III %28CHI subunit%29 protein from Ralstonia solanacearum %28142 aa%29. FASTA: opt: 142 Z-score: 187.9 E%28%29: 0.013 Smith-Waterman score: 142%3B 30.000identity in 120 aa overlap;Dbxref=GOA:Q5NHZ5,InterPro:IPR007459,UniProtKB%2FTrEMBL:Q5NHZ5,Genbank:YP_169347.1,GeneID:3192526;gbkey=CDS;product=DNA polymerase III subunit chi;protein_id=YP_169347.1;transl_table=11
NC_006570.2	RefSeq	gene	312388	315147	.	+	.	ID=gene305;Name=valS;Dbxref=GeneID:3191933;gbkey=Gene;gene=valS;locus_tag=FTT_0299
NC_006570.2	RefSeq	CDS	312388	315147	.	+	0	ID=cds264;Name=YP_169348.1;Parent=gene305;Note=valine--tRNA ligase%3B ValRS%3B converts valine ATP and tRNA%28Val%29 to AMP PPi and valyl-tRNA%28Val%29%3B class-I aminoacyl-tRNA synthetase type 1 subfamily%3B has a posttransfer editing process to hydrolyze mischarged Thr-tRNA%28Val%29 which is done by the editing domain;Dbxref=GOA:Q5NHZ4,InterPro:IPR019754,UniProtKB%2FSwiss-Prot:Q5NHZ4,Genbank:YP_169348.1,GeneID:3191933;gbkey=CDS;product=valyl-tRNA synthetase;protein_id=YP_169348.1;transl_table=11
NC_006570.2	RefSeq	gene	315176	316030	.	+	.	ID=gene306;Name=FTT_0300;Dbxref=GeneID:3191289;gbkey=Gene;locus_tag=FTT_0300
NC_006570.2	RefSeq	CDS	315176	316030	.	+	0	ID=cds265;Name=YP_169349.1;Parent=gene306;Note=ORF ftt0300;Dbxref=UniProtKB%2FTrEMBL:Q5NHZ3,Genbank:YP_169349.1,GeneID:3191289;gbkey=CDS;product=hypothetical protein;protein_id=YP_169349.1;transl_table=11
NC_006570.2	RefSeq	gene	316103	316972	.	+	.	ID=gene307;Name=FTT_0301;Dbxref=GeneID:3191288;gbkey=Gene;locus_tag=FTT_0301
NC_006570.2	RefSeq	CDS	316103	316972	.	+	0	ID=cds266;Name=YP_169350.1;Parent=gene307;Note=ORF ftt0301;Dbxref=UniProtKB%2FTrEMBL:Q5NHZ2,Genbank:YP_169350.1,GeneID:3191288;gbkey=CDS;product=hypothetical protein;protein_id=YP_169350.1;transl_table=11
NC_006570.2	RefSeq	gene	317156	317491	.	+	.	ID=gene308;Name=FTT_0302;Dbxref=GeneID:3191287;gbkey=Gene;locus_tag=FTT_0302
NC_006570.2	RefSeq	CDS	317156	317491	.	+	0	ID=cds267;Name=YP_169351.1;Parent=gene308;Note=ORF ftt0302;Dbxref=UniProtKB%2FTrEMBL:Q5NHZ1,Genbank:YP_169351.1,GeneID:3191287;gbkey=CDS;product=hypothetical protein;protein_id=YP_169351.1;transl_table=11
NC_006570.2	RefSeq	gene	317488	318645	.	-	.	ID=gene309;Name=lldD1;Dbxref=GeneID:3191464;gbkey=Gene;gene=lldD1;locus_tag=FTT_0303c
NC_006570.2	RefSeq	CDS	317488	318645	.	-	0	ID=cds268;Name=YP_169352.1;Parent=gene309;Note=Similar to Q9JTX1 L-lactate dehydrogenase from Neisseria meningitidis %28390 aa%29. FASTA: opt: 1591 Z-score: 1977.5 E%28%29: 3e-102 Smith-Waterman score: 1591%3B 60.789 identity in 380 aa overlap;Dbxref=GOA:Q5NHZ0,InterPro:IPR017934,UniProtKB%2FTrEMBL:Q5NHZ0,Genbank:YP_169352.1,GeneID:3191464;gbkey=CDS;product=L-lactate dehydrogenase;protein_id=YP_169352.1;transl_table=11
NC_006570.2	RefSeq	gene	318672	319325	.	-	.	ID=gene310;Name=nfnB;Dbxref=GeneID:3191694;gbkey=Gene;gene=nfnB;locus_tag=FTT_0304c
NC_006570.2	RefSeq	CDS	318672	319325	.	-	0	ID=cds269;Name=YP_169353.1;Parent=gene310;Note=catalyzes the reduction of nitroaromatic compounds such as nitrofurazone%2C quinones and the anti-tumor agent CB1954%3B NAD%28P%29H-dependent%3B oxygen insensitive;Dbxref=GOA:Q5NHY9,InterPro:IPR000415,UniProtKB%2FTrEMBL:Q5NHY9,Genbank:YP_169353.1,GeneID:3191694;gbkey=CDS;product=dihydropteridine reductase;protein_id=YP_169353.1;transl_table=11
NC_006570.2	RefSeq	gene	319465	319842	.	+	.	ID=gene311;Name=FTT_0305;Dbxref=GeneID:3191286;gbkey=Gene;locus_tag=FTT_0305
NC_006570.2	RefSeq	CDS	319465	319842	.	+	0	ID=cds270;Name=YP_169354.1;Parent=gene311;Note=Similar to Q88NZ1 MutT%2Fnudix family protein from Pseuodomonas putida %28137 aa%29. FASTA: opt: 224 Z-score: 293.2 E%28%29: 1.8e-08 Smith-Waterman score: 224%3B 34.545 identity in 110 aa overlap ORF ftt0305;Dbxref=GOA:Q5NHY8,InterPro:IPR000086,UniProtKB%2FTrEMBL:Q5NHY8,Genbank:YP_169354.1,GeneID:3191286;gbkey=CDS;product=MutT%2Fnudix family protein;protein_id=YP_169354.1;transl_table=11
NC_006570.2	RefSeq	gene	320015	321406	.	+	.	ID=gene312;Name=fumC;Dbxref=GeneID:3191124;gbkey=Gene;gene=fumC;locus_tag=FTT_0306
NC_006570.2	RefSeq	CDS	320015	321406	.	+	0	ID=cds271;Name=YP_169355.1;Parent=gene312;Note=class II family %28does not require metal%29%3B tetrameric enzyme%3B fumarase C%3B reversibly converts %28S%29-malate to fumarate and water%3B functions in the TCA cycle;Dbxref=GOA:Q5NHY7,InterPro:IPR005677,UniProtKB%2FTrEMBL:Q5NHY7,Genbank:YP_169355.1,GeneID:3191124;gbkey=CDS;product=fumarate hydratase;protein_id=YP_169355.1;transl_table=11
NC_006570.2	RefSeq	gene	321536	322942	.	+	.	ID=gene313;Name=gltX;Dbxref=GeneID:3191767;gbkey=Gene;gene=gltX;locus_tag=FTT_0307
NC_006570.2	RefSeq	CDS	321536	322942	.	+	0	ID=cds272;Name=YP_169356.1;Parent=gene313;Note=Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation;Dbxref=GOA:Q5NHY6,InterPro:IPR014729,UniProtKB%2FSwiss-Prot:Q5NHY6,Genbank:YP_169356.1,GeneID:3191767;gbkey=CDS;product=glutamyl-tRNA synthetase;protein_id=YP_169356.1;transl_table=11
NC_006570.2	RefSeq	gene	322933	323910	.	+	.	ID=gene314;Name=FTT_0308;Dbxref=GeneID:3191285;gbkey=Gene;locus_tag=FTT_0308
NC_006570.2	RefSeq	CDS	322933	323910	.	+	0	ID=cds273;Name=YP_169357.1;Parent=gene314;Note=ORF ftt0308;Dbxref=UniProtKB%2FTrEMBL:Q5NHY5,Genbank:YP_169357.1,GeneID:3191285;gbkey=CDS;product=hypothetical protein;protein_id=YP_169357.1;transl_table=11
NC_006570.2	RefSeq	repeat_region	323908	323926	.	-	.	ID=id56;Note=ISFtu2 19bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	gene	323934	324677	.	-	.	ID=gene315;Name=isftu2;Dbxref=GeneID:3190862;gbkey=Gene;gene=isftu2;locus_tag=FTT_0309c
NC_006570.2	RefSeq	CDS	323934	324677	.	-	0	ID=cds274;Name=YP_169358.1;Parent=gene315;Note=ISFtu2. Transposase%2C member of the IS5 family. Identical to Q8GM03  transposase from Francisella tularensis %28247 aa%29.;Dbxref=GOA:Q8GM03,InterPro:IPR002559,UniProtKB%2FTrEMBL:Q8GM03,Genbank:YP_169358.1,GeneID:3190862;gbkey=CDS;product=transposase;protein_id=YP_169358.1;transl_table=11
NC_006570.2	RefSeq	repeat_region	324754	324772	.	-	.	ID=id57;Note=ISFtu2 19bp terminal inverted repeat. Substitution at position 1 of a T with a C;gbkey=repeat_region
NC_006570.2	RefSeq	gene	324973	326427	.	+	.	ID=gene316;Name=FTT_0310;Dbxref=GeneID:3191283;gbkey=Gene;locus_tag=FTT_0310
NC_006570.2	RefSeq	CDS	324973	326427	.	+	0	ID=cds275;Name=YP_169359.1;Parent=gene316;Note=Similar to Q8XT33 Probable amino-acid permease transmembrane protein from Ralstonia solanacearum %28543 aa%29. FASTA: opt: 999 Z-score: 1146.0 E%28%29: 5.5e-5 Smith-Waterman score: 999%3B 34.924 identity in 461 aa overlap ORF ftt0310;Dbxref=GOA:Q5NHY3,InterPro:IPR004841,UniProtKB%2FTrEMBL:Q5NHY3,Genbank:YP_169359.1,GeneID:3191283;gbkey=CDS;product=amino acid permease;protein_id=YP_169359.1;transl_table=11
NC_006570.2	RefSeq	gene	326622	326697	.	+	.	ID=gene317;Name=tRNA-Glu %28TTC%29;Dbxref=GeneID:3192221;description=tRNA-Glu %28TTC%29;gbkey=Gene;gene=tRNA-Glu %28TTC%29;locus_tag=FTT_t08
NC_006570.2	RefSeq	tRNA	326622	326697	.	+	.	ID=rna7;Dbxref=GeneID:3192221;codons=58;gbkey=tRNA;product=tRNA-Glu
NC_006570.2	RefSeq	exon	326622	326697	.	+	.	ID=id58;Parent=rna7;Dbxref=GeneID:3192221;codons=58;gbkey=tRNA;product=tRNA-Glu
NC_006570.2	RefSeq	gene	326759	327682	.	-	.	ID=gene318;Name=FTT_0311c;Dbxref=GeneID:3191081;gbkey=Gene;locus_tag=FTT_0311c
NC_006570.2	RefSeq	CDS	326759	327682	.	-	0	ID=cds276;Name=YP_169360.1;Parent=gene318;Note=Similar to Q9KKV6 Hypothetical protein VCA0994 from Vibrio cholerae %28326 aa%29. FASTA: opt: 558 Z-score: 686.8 E%28%29: 2.3e-30 Smith-Waterman score: 558%3B 31.949 identity in 313 aa overlap ORF ftt0311c;Dbxref=InterPro:IPR014541,UniProtKB%2FTrEMBL:Q5NHY2,Genbank:YP_169360.1,GeneID:3191081;gbkey=CDS;product=hypothetical protein;protein_id=YP_169360.1;transl_table=11
NC_006570.2	RefSeq	gene	327764	328264	.	-	.	ID=gene319;Name=folA;Dbxref=GeneID:3191943;gbkey=Gene;gene=folA;locus_tag=FTT_0312c
NC_006570.2	RefSeq	CDS	327764	328264	.	-	0	ID=cds277;Name=YP_169361.1;Parent=gene319;Note=Similar to Q9K7B6 Dihydrofolate reductase from Bacillus halodurans %28163 aa%29. FASTA: opt: 465 Z-score: 598.3 E%28%29: 2e-25 Smith-Waterman score: 465%3B 41.566 identity in 166 aa overlap;Dbxref=GOA:Q5NHY1,InterPro:IPR012259,UniProtKB%2FTrEMBL:Q5NHY1,Genbank:YP_169361.1,GeneID:3191943;gbkey=CDS;product=dihydrofolate reductase type I;protein_id=YP_169361.1;transl_table=11
NC_006570.2	RefSeq	gene	328496	329215	.	+	.	ID=gene320;Name=rpsB;Dbxref=GeneID:3191975;gbkey=Gene;gene=rpsB;locus_tag=FTT_0313
NC_006570.2	RefSeq	CDS	328496	329215	.	+	0	ID=cds278;Name=YP_169362.1;Parent=gene320;Note=one of the last subunits in the assembly of the 30S subunit%3B absence of S2 does not inhibit assembly but results in an inactive subunit;Dbxref=GOA:Q5NHY0,InterPro:IPR018130,UniProtKB%2FSwiss-Prot:Q5NHY0,Genbank:YP_169362.1,GeneID:3191975;gbkey=CDS;product=30S ribosomal protein S2;protein_id=YP_169362.1;transl_table=11
NC_006570.2	RefSeq	gene	329237	330106	.	+	.	ID=gene321;Name=tsf;Dbxref=GeneID:3191005;gbkey=Gene;gene=tsf;locus_tag=FTT_0314
NC_006570.2	RefSeq	CDS	329237	330106	.	+	0	ID=cds279;Name=YP_169363.1;Parent=gene321;Note=EF-Ts%3B functions during elongation stage of protein translation%3B forms a dimer%3B associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu;Dbxref=GOA:Q5NHX9,InterPro:IPR018101,UniProtKB%2FSwiss-Prot:Q5NHX9,Genbank:YP_169363.1,GeneID:3191005;gbkey=CDS;product=elongation factor Ts;protein_id=YP_169363.1;transl_table=11
NC_006570.2	RefSeq	gene	330110	330859	.	+	.	ID=gene322;Name=pyrH;Dbxref=GeneID:3191650;gbkey=Gene;gene=pyrH;locus_tag=FTT_0315
NC_006570.2	RefSeq	CDS	330110	330859	.	+	0	ID=cds280;Name=YP_169364.1;Parent=gene322;Note=Catalyzes the phosphorylation of UMP to UDP;Dbxref=GOA:Q5NHX8,InterPro:IPR015963,UniProtKB%2FSwiss-Prot:Q5NHX8,Genbank:YP_169364.1,GeneID:3191650;gbkey=CDS;product=uridylate kinase;protein_id=YP_169364.1;transl_table=11
NC_006570.2	RefSeq	gene	330888	331445	.	+	.	ID=gene323;Name=frr;Dbxref=GeneID:3191428;gbkey=Gene;gene=frr;locus_tag=FTT_0316
NC_006570.2	RefSeq	CDS	330888	331445	.	+	0	ID=cds281;Name=YP_169365.1;Parent=gene323;Note=Rrf%3B Frr%3B ribosome-recycling factor%3B release factor 4%3B RF4%3B recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G%3B A GTPase-dependent process results in release of 50S from 70S%3B inhibited by release factor RF-1%3B essential for viability%3B structurally similar to tRNAs;Dbxref=GOA:Q5NHX7,InterPro:IPR015998,UniProtKB%2FSwiss-Prot:Q5NHX7,Genbank:YP_169365.1,GeneID:3191428;gbkey=CDS;product=ribosome recycling factor;protein_id=YP_169365.1;transl_table=11
NC_006570.2	RefSeq	gene	331478	332251	.	+	.	ID=gene324;Name=uppS;Dbxref=GeneID:3191904;gbkey=Gene;gene=uppS;locus_tag=FTT_0317
NC_006570.2	RefSeq	CDS	331478	332251	.	+	0	ID=cds282;Name=YP_169366.1;Parent=gene324;Note=catalyzes the formation of undecaprenyl pyrophosphate from isopentenyl pyrophosphate;Dbxref=GOA:Q5NHX6,InterPro:IPR018520,UniProtKB%2FSwiss-Prot:Q5NHX6,Genbank:YP_169366.1,GeneID:3191904;gbkey=CDS;product=undecaprenyl pyrophosphate synthase;protein_id=YP_169366.1;transl_table=11
NC_006570.2	RefSeq	gene	332265	333059	.	+	.	ID=gene325;Name=cdsA;Dbxref=GeneID:3190936;gbkey=Gene;gene=cdsA;locus_tag=FTT_0318
NC_006570.2	RefSeq	CDS	332265	333059	.	+	0	ID=cds283;Name=YP_169367.1;Parent=gene325;Note=Similar to Q88MH5 Phosphatidate cytidylyltransferase from Pseudomonas putida %28271 aa%29. FASTA: 398 opt: 534 Z-score: 626.6 E%28%29: 5.2e-27 Smith-Waterman score: 536%3B 35.926 identity in 270 aa overlap;Dbxref=GOA:Q5NHX5,InterPro:IPR000374,UniProtKB%2FTrEMBL:Q5NHX5,Genbank:YP_169367.1,GeneID:3190936;gbkey=CDS;product=phosphatidate cytidylyltransferase;protein_id=YP_169367.1;transl_table=11
NC_006570.2	RefSeq	gene	333069	333515	.	+	.	ID=gene326;Name=dut;Dbxref=GeneID:3191551;gbkey=Gene;gene=dut;locus_tag=FTT_0319
NC_006570.2	RefSeq	CDS	333069	333515	.	+	0	ID=cds284;Name=YP_169368.1;Parent=gene326;Note=catalyzes the formation of dUMP from dUTP;Dbxref=GOA:Q5NHX4,InterPro:IPR008181,UniProtKB%2FSwiss-Prot:Q5NHX4,Genbank:YP_169368.1,GeneID:3191551;gbkey=CDS;product=deoxyuridine 5%27-triphosphate nucleotidohydrolase;protein_id=YP_169368.1;transl_table=11
NC_006570.2	RefSeq	gene	333519	334115	.	+	.	ID=gene327;Name=pgsA;Dbxref=GeneID:3191364;gbkey=Gene;gene=pgsA;locus_tag=FTT_0320
NC_006570.2	RefSeq	CDS	333519	334115	.	+	0	ID=cds285;Name=YP_169369.1;Parent=gene327;Note=Similar to Q8XFD0 Phosphotidylglycerophosphate synthetase from Salmonella typhi %28182 aa%29. FASTA: opt: 575 Z-score: 728.4 E%28%29: 1.1e-32 Smith-Waterman score: 618%3B 50.000identity in 188 aa overlap;Dbxref=GOA:Q5NHX3,InterPro:IPR004570,UniProtKB%2FTrEMBL:Q5NHX3,Genbank:YP_169369.1,GeneID:3191364;gbkey=CDS;product=phosphatidylglycerophosphate synthetase;protein_id=YP_169369.1;transl_table=11
NC_006570.2	RefSeq	gene	334250	334624	.	+	.	ID=gene328;Name=rpsL;Dbxref=GeneID:3191538;gbkey=Gene;gene=rpsL;locus_tag=FTT_0321
NC_006570.2	RefSeq	CDS	334250	334624	.	+	0	ID=cds286;Name=YP_169370.1;Parent=gene328;Note=interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone%3B located at the interface of the 30S and 50S subunits%2C it traverses the body of the 30S subunit contacting proteins on the other side%3B mutations in the S12 gene confer streptomycin resistance;Dbxref=GOA:Q5NHX2,InterPro:IPR012340,UniProtKB%2FSwiss-Prot:Q5NHX2,Genbank:YP_169370.1,GeneID:3191538;gbkey=CDS;product=30S ribosomal protein S12;protein_id=YP_169370.1;transl_table=11
NC_006570.2	RefSeq	gene	334663	335136	.	+	.	ID=gene329;Name=rpsG;Dbxref=GeneID:3191970;gbkey=Gene;gene=rpsG;locus_tag=FTT_0322
NC_006570.2	RefSeq	CDS	334663	335136	.	+	0	ID=cds287;Name=YP_169371.1;Parent=gene329;Note=binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit;Dbxref=GOA:Q5NHX1,InterPro:IPR005717,UniProtKB%2FSwiss-Prot:Q5NHX1,Genbank:YP_169371.1,GeneID:3191970;gbkey=CDS;product=30S ribosomal protein S7;protein_id=YP_169371.1;transl_table=11
NC_006570.2	RefSeq	gene	335151	337265	.	+	.	ID=gene330;Name=fusA;Dbxref=GeneID:3191127;gbkey=Gene;gene=fusA;locus_tag=FTT_0323
NC_006570.2	RefSeq	CDS	335151	337265	.	+	0	ID=cds288;Name=YP_169372.1;Parent=gene330;Note=EF-G%3B promotes GTP-dependent translocation of the ribosome during translation%3B many organisms have multiple copies of this gene;Dbxref=GOA:Q5NHX0,InterPro:IPR014721,UniProtKB%2FSwiss-Prot:Q5NHX0,Genbank:YP_169372.1,GeneID:3191127;gbkey=CDS;product=elongation factor G;protein_id=YP_169372.1;transl_table=11
NC_006570.2	RefSeq	gene	337286	337603	.	+	.	ID=gene331;Name=rpsJ;Dbxref=GeneID:3191189;gbkey=Gene;gene=rpsJ;locus_tag=FTT_0324
NC_006570.2	RefSeq	CDS	337286	337603	.	+	0	ID=cds289;Name=YP_169373.1;Parent=gene331;Note=NusE%3B involved in assembly of the 30S subunit%3B in the ribosome%2C this protein is involved in the binding of tRNA%3B in Escherichia coli this protein was also found to be involved in transcription antitermination%3B NusB%2FS10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination%3B binding of NusB%2FS10 to boxA nucleates assembly of the antitermination complex;Dbxref=GOA:Q5NHW9,InterPro:IPR018268,UniProtKB%2FSwiss-Prot:Q5NHW9,Genbank:YP_169373.1,GeneID:3191189;gbkey=CDS;product=30S ribosomal protein S10;protein_id=YP_169373.1;transl_table=11
NC_006570.2	RefSeq	gene	337707	338342	.	+	.	ID=gene332;Name=rplC;Dbxref=GeneID:3192021;gbkey=Gene;gene=rplC;locus_tag=FTT_0325
NC_006570.2	RefSeq	CDS	337707	338342	.	+	0	ID=cds290;Name=YP_169374.1;Parent=gene332;Note=binds directly near the 3%27 end of the 23S rRNA%2C where it nucleates assembly of the 50S subunit%3B essential for peptidyltransferase activity%3B mutations in this gene confer resistance to tiamulin;Dbxref=GOA:Q5NHW8,InterPro:IPR000597,UniProtKB%2FSwiss-Prot:Q5NHW8,Genbank:YP_169374.1,GeneID:3192021;gbkey=CDS;product=50S ribosomal protein L3;protein_id=YP_169374.1;transl_table=11
NC_006570.2	RefSeq	gene	338372	338995	.	+	.	ID=gene333;Name=rplD;Dbxref=GeneID:3192020;gbkey=Gene;gene=rplD;locus_tag=FTT_0326
NC_006570.2	RefSeq	CDS	338372	338995	.	+	0	ID=cds291;Name=YP_169375.1;Parent=gene333;Note=L4 is important during the early stages of 50S assembly%3B it initially binds near the 5%27 end of the 23S rRNA;Dbxref=GOA:Q5NHW7,InterPro:IPR015498,UniProtKB%2FSwiss-Prot:Q5NHW7,Genbank:YP_169375.1,GeneID:3192020;gbkey=CDS;product=50S ribosomal protein L4;protein_id=YP_169375.1;transl_table=11
NC_006570.2	RefSeq	gene	338992	339291	.	+	.	ID=gene334;Name=rplW;Dbxref=GeneID:3191999;gbkey=Gene;gene=rplW;locus_tag=FTT_0327
NC_006570.2	RefSeq	CDS	338992	339291	.	+	0	ID=cds292;Name=YP_169376.1;Parent=gene334;Note=binds third domain of 23S rRNA and protein L29%3B part of exit tunnel;Dbxref=GOA:Q5NHW6,InterPro:IPR013025,UniProtKB%2FSwiss-Prot:Q5NHW6,Genbank:YP_169376.1,GeneID:3191999;gbkey=CDS;product=50S ribosomal protein L23;protein_id=YP_169376.1;transl_table=11
NC_006570.2	RefSeq	gene	339313	340137	.	+	.	ID=gene335;Name=rplB;Dbxref=GeneID:3192022;gbkey=Gene;gene=rplB;locus_tag=FTT_0328
NC_006570.2	RefSeq	CDS	339313	340137	.	+	0	ID=cds293;Name=YP_169377.1;Parent=gene335;Note=one of the primary rRNA-binding proteins%3B required for association of the 30S and 50S subunits to form the 70S ribosome%2C for tRNA binding and peptide bond formation;Dbxref=GOA:Q5NHW5,InterPro:IPR014722,UniProtKB%2FSwiss-Prot:Q5NHW5,Genbank:YP_169377.1,GeneID:3192022;gbkey=CDS;product=50S ribosomal protein L2;protein_id=YP_169377.1;transl_table=11
NC_006570.2	RefSeq	gene	340152	340430	.	+	.	ID=gene336;Name=rpsS;Dbxref=GeneID:3192508;gbkey=Gene;gene=rpsS;locus_tag=FTT_0329
NC_006570.2	RefSeq	CDS	340152	340430	.	+	0	ID=cds294;Name=YP_169378.1;Parent=gene336;Note=protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA;Dbxref=GOA:Q5NHW4,InterPro:IPR005732,UniProtKB%2FSwiss-Prot:Q5NHW4,Genbank:YP_169378.1,GeneID:3192508;gbkey=CDS;product=30S ribosomal protein S19;protein_id=YP_169378.1;transl_table=11
NC_006570.2	RefSeq	gene	340446	340781	.	+	.	ID=gene337;Name=rplV;Dbxref=GeneID:3192000;gbkey=Gene;gene=rplV;locus_tag=FTT_0330
NC_006570.2	RefSeq	CDS	340446	340781	.	+	0	ID=cds295;Name=YP_169379.1;Parent=gene337;Note=binds specifically to 23S rRNA during the early stages of 50S assembly%3B makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome%3B mutations in this gene result in erythromycin resistance%3B located near peptidyl-transferase center;Dbxref=GOA:Q5NHW3,InterPro:IPR018260,UniProtKB%2FSwiss-Prot:Q5NHW3,Genbank:YP_169379.1,GeneID:3192000;gbkey=CDS;product=50S ribosomal protein L22;protein_id=YP_169379.1;transl_table=11
NC_006570.2	RefSeq	gene	340796	341455	.	+	.	ID=gene338;Name=rpsC;Dbxref=GeneID:3191974;gbkey=Gene;gene=rpsC;locus_tag=FTT_0331;partial=true
NC_006570.2	RefSeq	CDS	340796	341455	.	+	0	ID=cds296;Name=YP_169380.2;Parent=gene338;Note=truncated%3B forms a complex with S10 and S14%3B binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation;Dbxref=GOA:Q5NHW2,InterPro:IPR018280,UniProtKB%2FSwiss-Prot:Q5NHW2,Genbank:YP_169380.2,GeneID:3191974;gbkey=CDS;product=30S ribosomal protein S3;protein_id=YP_169380.2;transl_table=11
NC_006570.2	RefSeq	gene	341468	341881	.	+	.	ID=gene339;Name=rplP;Dbxref=GeneID:3192008;gbkey=Gene;gene=rplP;locus_tag=FTT_0332
NC_006570.2	RefSeq	CDS	341468	341881	.	+	0	ID=cds297;Name=YP_169381.1;Parent=gene339;Note=located in the peptidyl transferase center and may be involved in peptidyl transferase activity%3B similar to archaeal L10e;Dbxref=GOA:Q5NHW1,InterPro:IPR016180,UniProtKB%2FSwiss-Prot:Q5NHW1,Genbank:YP_169381.1,GeneID:3192008;gbkey=CDS;product=50S ribosomal protein L16;protein_id=YP_169381.1;transl_table=11
NC_006570.2	RefSeq	gene	341881	342081	.	+	.	ID=gene340;Name=rpmC;Dbxref=GeneID:3191993;gbkey=Gene;gene=rpmC;locus_tag=FTT_0333
NC_006570.2	RefSeq	CDS	341881	342081	.	+	0	ID=cds298;Name=YP_169382.1;Parent=gene340;Note=one of the stabilizing components for the large ribosomal subunit;Dbxref=GOA:Q5NHW0,InterPro:IPR018254,UniProtKB%2FSwiss-Prot:Q5NHW0,Genbank:YP_169382.1,GeneID:3191993;gbkey=CDS;product=50S ribosomal protein L29;protein_id=YP_169382.1;transl_table=11
NC_006570.2	RefSeq	gene	342094	342345	.	+	.	ID=gene341;Name=rpsQ;Dbxref=GeneID:3191023;gbkey=Gene;gene=rpsQ;locus_tag=FTT_0334
NC_006570.2	RefSeq	CDS	342094	342345	.	+	0	ID=cds299;Name=YP_169383.1;Parent=gene341;Note=primary binding protein%3B helps mediate assembly%3B involved in translation fidelity;Dbxref=GOA:Q5NHV9,InterPro:IPR012340,UniProtKB%2FSwiss-Prot:Q5NHV9,Genbank:YP_169383.1,GeneID:3191023;gbkey=CDS;product=30S ribosomal protein S17;protein_id=YP_169383.1;transl_table=11
NC_006570.2	RefSeq	gene	342437	342805	.	+	.	ID=gene342;Name=rplN;Dbxref=GeneID:3192011;gbkey=Gene;gene=rplN;locus_tag=FTT_0335
NC_006570.2	RefSeq	CDS	342437	342805	.	+	0	ID=cds300;Name=YP_169384.1;Parent=gene342;Note=binds to the 23S rRNA between the centers for peptidyl transferase and GTPase;Dbxref=GOA:Q5NHV8,InterPro:IPR005745,UniProtKB%2FSwiss-Prot:Q5NHV8,Genbank:YP_169384.1,GeneID:3192011;gbkey=CDS;product=50S ribosomal protein L14;protein_id=YP_169384.1;transl_table=11
NC_006570.2	RefSeq	gene	342827	343144	.	+	.	ID=gene343;Name=rplX;Dbxref=GeneID:3191998;gbkey=Gene;gene=rplX;locus_tag=FTT_0336
NC_006570.2	RefSeq	CDS	342827	343144	.	+	0	ID=cds301;Name=YP_169385.1;Parent=gene343;Note=assembly initiator protein%3B binds to 5%27 end of 23S rRNA and nucleates assembly of the 50S%3B surrounds polypeptide exit tunnel;Dbxref=GOA:Q5NHV7,InterPro:IPR005825,UniProtKB%2FSwiss-Prot:Q5NHV7,Genbank:YP_169385.1,GeneID:3191998;gbkey=CDS;product=50S ribosomal protein L24;protein_id=YP_169385.1;transl_table=11
NC_006570.2	RefSeq	gene	343156	343695	.	+	.	ID=gene344;Name=rplE;Dbxref=GeneID:3192018;gbkey=Gene;gene=rplE;locus_tag=FTT_0337
NC_006570.2	RefSeq	CDS	343156	343695	.	+	0	ID=cds302;Name=YP_169386.1;Parent=gene344;Note=part of 50S and 5S%2FL5%2FL18%2FL25 subcomplex%3B contacts 5S rRNA and P site tRNA%3B forms a bridge to the 30S subunit in the ribosome by binding to S13;Dbxref=GOA:Q5NHV6,InterPro:IPR002132,UniProtKB%2FSwiss-Prot:Q5NHV6,Genbank:YP_169386.1,GeneID:3192018;gbkey=CDS;product=50S ribosomal protein L5;protein_id=YP_169386.1;transl_table=11
NC_006570.2	RefSeq	gene	343714	344019	.	+	.	ID=gene345;Name=rpsN;Dbxref=GeneID:3192379;gbkey=Gene;gene=rpsN;locus_tag=FTT_0338
NC_006570.2	RefSeq	CDS	343714	344019	.	+	0	ID=cds303;Name=YP_169387.1;Parent=gene345;Note=located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit%3B similar to what is observed with proteins L31 and L33%2C some proteins in this family contain CXXC motifs that are involved in zinc binding%3B if two copies are present in a genome%2C then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc%3B the proteins in this group do not appear to have the zinc-binding motif;Dbxref=GOA:Q5NHV5,InterPro:IPR018271,UniProtKB%2FSwiss-Prot:Q5NHV5,Genbank:YP_169387.1,GeneID:3192379;gbkey=CDS;product=30S ribosomal protein S14;protein_id=YP_169387.1;transl_table=11
NC_006570.2	RefSeq	gene	344036	344434	.	+	.	ID=gene346;Name=rpsH;Dbxref=GeneID:3190958;gbkey=Gene;gene=rpsH;locus_tag=FTT_0339
NC_006570.2	RefSeq	CDS	344036	344434	.	+	0	ID=cds304;Name=YP_169388.1;Parent=gene346;Note=binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit;Dbxref=GOA:Q5NHV4,InterPro:IPR000630,UniProtKB%2FSwiss-Prot:Q5NHV4,Genbank:YP_169388.1,GeneID:3190958;gbkey=CDS;product=30S ribosomal protein S8;protein_id=YP_169388.1;transl_table=11
NC_006570.2	RefSeq	gene	344453	344989	.	+	.	ID=gene347;Name=rplF;Dbxref=GeneID:3192017;gbkey=Gene;gene=rplF;locus_tag=FTT_0340
NC_006570.2	RefSeq	CDS	344453	344989	.	+	0	ID=cds305;Name=YP_169389.1;Parent=gene347;Note=ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein%3B RNA-binding appears to be in the C-terminal domain%3B mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain%3B it has been localized to a region between the base of the L7%2FL12 stalk and the central protuberance;Dbxref=GOA:Q5NHV3,InterPro:IPR002358,UniProtKB%2FSwiss-Prot:Q5NHV3,Genbank:YP_169389.1,GeneID:3192017;gbkey=CDS;product=50S ribosomal protein L6;protein_id=YP_169389.1;transl_table=11
NC_006570.2	RefSeq	gene	345012	345365	.	+	.	ID=gene348;Name=rplR;Dbxref=GeneID:3192006;gbkey=Gene;gene=rplR;locus_tag=FTT_0341
NC_006570.2	RefSeq	CDS	345012	345365	.	+	0	ID=cds306;Name=YP_169390.1;Parent=gene348;Note=binds 5S rRNA along with protein L5 and L25;Dbxref=GOA:Q5NHV2,InterPro:IPR005484,UniProtKB%2FSwiss-Prot:Q5NHV2,Genbank:YP_169390.1,GeneID:3192006;gbkey=CDS;product=50S ribosomal protein L18;protein_id=YP_169390.1;transl_table=11
NC_006570.2	RefSeq	gene	345393	345893	.	+	.	ID=gene349;Name=rpsE;Dbxref=GeneID:3191972;gbkey=Gene;gene=rpsE;locus_tag=FTT_0342
NC_006570.2	RefSeq	CDS	345393	345893	.	+	0	ID=cds307;Name=YP_169391.1;Parent=gene349;Note=located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body%3B contacts S4 and S8%3B with S4 and S12 plays a role in translational accuracy%3B mutations in this gene result in spectinomycin resistance;Dbxref=GOA:Q5NHV1,InterPro:IPR018192,UniProtKB%2FSwiss-Prot:Q5NHV1,Genbank:YP_169391.1,GeneID:3191972;gbkey=CDS;product=30S ribosomal protein S5;protein_id=YP_169391.1;transl_table=11
NC_006570.2	RefSeq	gene	345900	346085	.	+	.	ID=gene350;Name=rpmD;Dbxref=GeneID:3191991;gbkey=Gene;gene=rpmD;locus_tag=FTT_0343
NC_006570.2	RefSeq	CDS	345900	346085	.	+	0	ID=cds308;Name=YP_169392.1;Parent=gene350;Note=L30 binds domain II of the 23S rRNA and the 5S rRNA%3B similar to eukaryotic protein L7;Dbxref=GOA:Q5NHV0,InterPro:IPR018038,UniProtKB%2FSwiss-Prot:Q5NHV0,Genbank:YP_169392.1,GeneID:3191991;gbkey=CDS;product=50S ribosomal protein L30;protein_id=YP_169392.1;transl_table=11
NC_006570.2	RefSeq	gene	346092	346523	.	+	.	ID=gene351;Name=rplO;Dbxref=GeneID:3192010;gbkey=Gene;gene=rplO;locus_tag=FTT_0344
NC_006570.2	RefSeq	CDS	346092	346523	.	+	0	ID=cds309;Name=YP_169393.1;Parent=gene351;Note=late assembly protein;Dbxref=GOA:Q5NHU9,InterPro:IPR005749,UniProtKB%2FSwiss-Prot:Q5NHU9,Genbank:YP_169393.1,GeneID:3192010;gbkey=CDS;product=50S ribosomal protein L15;protein_id=YP_169393.1;transl_table=11
NC_006570.2	RefSeq	gene	346534	347859	.	+	.	ID=gene352;Name=secY;Dbxref=GeneID:3190709;gbkey=Gene;gene=secY;locus_tag=FTT_0345
NC_006570.2	RefSeq	CDS	346534	347859	.	+	0	ID=cds310;Name=YP_169394.1;Parent=gene352;Note=forms heterotrimeric complex in the membrane%3B in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG%3B the SecG subunit is not essential%3B in bacteria translocation is driven via the SecA ATPase;Dbxref=GOA:Q5NHU8,InterPro:IPR002208,UniProtKB%2FTrEMBL:Q5NHU8,Genbank:YP_169394.1,GeneID:3190709;gbkey=CDS;product=preprotein translocase subunit SecY;protein_id=YP_169394.1;transl_table=11
NC_006570.2	RefSeq	gene	347883	347996	.	+	.	ID=gene353;Name=rpmJ;Dbxref=GeneID:3191985;gbkey=Gene;gene=rpmJ;locus_tag=FTT_0346
NC_006570.2	RefSeq	CDS	347883	347996	.	+	0	ID=cds311;Name=YP_169395.1;Parent=gene353;Note=smallest protein in the large subunit%3B similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc%3B the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion%3B the proteins in this group have the motif;Dbxref=GOA:Q5NHU7,InterPro:IPR000473,UniProtKB%2FSwiss-Prot:Q5NHU7,Genbank:YP_169395.1,GeneID:3191985;gbkey=CDS;product=50S ribosomal protein L36;protein_id=YP_169395.1;transl_table=11
NC_006570.2	RefSeq	gene	348113	348469	.	+	.	ID=gene354;Name=rpsM;Dbxref=GeneID:3191860;gbkey=Gene;gene=rpsM;locus_tag=FTT_0347
NC_006570.2	RefSeq	CDS	348113	348469	.	+	0	ID=cds312;Name=YP_169396.1;Parent=gene354;Note=located at the top of the head of the 30S subunit%2C it contacts several helices of the 16S rRNA%3B makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5%3B contacts P-site tRNA;Dbxref=GOA:Q5NHU6,InterPro:IPR018269,UniProtKB%2FSwiss-Prot:Q5NHU6,Genbank:YP_169396.1,GeneID:3191860;gbkey=CDS;product=30S ribosomal protein S13;protein_id=YP_169396.1;transl_table=11
NC_006570.2	RefSeq	gene	348509	348898	.	+	.	ID=gene355;Name=rpsK;Dbxref=GeneID:3190768;gbkey=Gene;gene=rpsK;locus_tag=FTT_0348
NC_006570.2	RefSeq	CDS	348509	348898	.	+	0	ID=cds313;Name=YP_169397.1;Parent=gene355;Note=located on the platform of the 30S subunit%2C it bridges several disparate RNA helices of the 16S rRNA%3B forms part of the Shine-Dalgarno cleft in the 70S ribosome%3B interacts with S7 and S18 and IF-3;Dbxref=GOA:Q5NHU5,InterPro:IPR018102,UniProtKB%2FSwiss-Prot:Q5NHU5,Genbank:YP_169397.1,GeneID:3190768;gbkey=CDS;product=30S ribosomal protein S11;protein_id=YP_169397.1;transl_table=11
NC_006570.2	RefSeq	gene	348920	349540	.	+	.	ID=gene356;Name=rpsD;Dbxref=GeneID:3191973;gbkey=Gene;gene=rpsD;locus_tag=FTT_0349
NC_006570.2	RefSeq	CDS	348920	349540	.	+	0	ID=cds314;Name=YP_169398.1;Parent=gene356;Note=primary rRNA binding protein%3B nucleates 30S assembly%3B involved in translational accuracy with proteins S5 and S12%3B interacts with protein S5%3B involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA%3B interacts with transcription complex and functions similar to protein NusA in antitermination;Dbxref=GOA:Q5NHU4,InterPro:IPR018079,UniProtKB%2FSwiss-Prot:Q5NHU4,Genbank:YP_169398.1,GeneID:3191973;gbkey=CDS;product=30S ribosomal protein S4;protein_id=YP_169398.1;transl_table=11
NC_006570.2	RefSeq	gene	349598	350569	.	+	.	ID=gene357;Name=rpoA1;Dbxref=GeneID:3191984;gbkey=Gene;gene=rpoA1;locus_tag=FTT_0350
NC_006570.2	RefSeq	CDS	349598	350569	.	+	0	ID=cds315;Name=YP_169399.1;Parent=gene357;Note=catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme;Dbxref=GOA:Q5NHU3,InterPro:IPR011773,UniProtKB%2FSwiss-Prot:Q5NHU3,Genbank:YP_169399.1,GeneID:3191984;gbkey=CDS;product=DNA-directed RNA polymerase subunit alpha;protein_id=YP_169399.1;transl_table=11
NC_006570.2	RefSeq	gene	350614	351051	.	+	.	ID=gene358;Name=rplQ;Dbxref=GeneID:3192007;gbkey=Gene;gene=rplQ;locus_tag=FTT_0351
NC_006570.2	RefSeq	CDS	350614	351051	.	+	0	ID=cds316;Name=YP_169400.1;Parent=gene358;Note=is a component of the macrolide binding site in the peptidyl transferase center;Dbxref=GOA:Q5NHU2,InterPro:IPR000456,UniProtKB%2FSwiss-Prot:Q5NHU2,Genbank:YP_169400.1,GeneID:3192007;gbkey=CDS;product=50S ribosomal protein L17;protein_id=YP_169400.1;transl_table=11
NC_006570.2	RefSeq	repeat_region	351141	351152	.	+	.	ID=id59;Note=ISFtu1 12bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	351153	351168	.	+	.	ID=id60;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	351169	351184	.	+	.	ID=id61;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;gbkey=repeat_region
NC_006570.2	RefSeq	gene	351205	351989	.	+	.	ID=gene359;Name=isftu1;Dbxref=GeneID:3192216;gbkey=Gene;gene=isftu1;locus_tag=FTT_0352
NC_006570.2	RefSeq	CDS	351205	351531	.	+	0	ID=cds317;Name=YP_169401.1;Parent=gene359;Note=ISFtu1. Transposase%2C member of the IS630 Tc-1 mariner family. Identical to Q93EJ6  transposase from Francisella tularensis %28118 aa%29 from aa 144-261. Identical to Q93EJ7  transposase from Francisella tularensis %28126 aa%29 from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF%27s. ORF1 %28identical to Q93EJ7%29 contains a programmed ribosomal frameshifting motif%2C 5%27-AAAAAAAG-3%27 at aa position 109 which permits frameshifting to ORF2 %28identical to Q93EJ6%29 to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family%2C and also mariner elements%2C show that this transposase shares strongly conserved residues%2C including a fully conserved dipeptide%2CAsp-Glu %28DE%29%2C and a block consisting of a fully conserved Asp and highly conserved Glu%2C separated by 34 or 35 residues %28D35E%29. The conserved dipeptide is only present if ribosomal frameshifting occurs.;Dbxref=UniProtKB%2FTrEMBL:Q5NIH2,Genbank:YP_169401.1,GeneID:3192216;gbkey=CDS;product=transposase;protein_id=YP_169401.1;transl_table=11
NC_006570.2	RefSeq	CDS	351531	351989	.	+	0	ID=cds317;Name=YP_169401.1;Parent=gene359;Note=ISFtu1. Transposase%2C member of the IS630 Tc-1 mariner family. Identical to Q93EJ6  transposase from Francisella tularensis %28118 aa%29 from aa 144-261. Identical to Q93EJ7  transposase from Francisella tularensis %28126 aa%29 from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF%27s. ORF1 %28identical to Q93EJ7%29 contains a programmed ribosomal frameshifting motif%2C 5%27-AAAAAAAG-3%27 at aa position 109 which permits frameshifting to ORF2 %28identical to Q93EJ6%29 to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family%2C and also mariner elements%2C show that this transposase shares strongly conserved residues%2C including a fully conserved dipeptide%2CAsp-Glu %28DE%29%2C and a block consisting of a fully conserved Asp and highly conserved Glu%2C separated by 34 or 35 residues %28D35E%29. The conserved dipeptide is only present if ribosomal frameshifting occurs.;Dbxref=UniProtKB%2FTrEMBL:Q5NIH2,Genbank:YP_169401.1,GeneID:3192216;gbkey=CDS;product=transposase;protein_id=YP_169401.1;transl_table=11
NC_006570.2	RefSeq	repeat_region	352077	352088	.	+	.	ID=id62;Note=ISFtu1 12bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	gene	352087	352548	.	-	.	ID=gene360;Name=isftu2;Dbxref=GeneID:3190924;gbkey=Gene;gene=isftu2;locus_tag=FTT_0353c;pseudo=true
NC_006570.2	RefSeq	gene	352918	353913	.	+	.	ID=gene361;Name=FTT_0354;Dbxref=GeneID:3191453;gbkey=Gene;locus_tag=FTT_0354
NC_006570.2	RefSeq	CDS	352918	353913	.	+	0	ID=cds318;Name=YP_169402.1;Parent=gene361;Note=Duplicate of FTT0378 and FTT1263 ORF ftt0354;Dbxref=InterPro:IPR007577,UniProtKB%2FTrEMBL:Q5NHR8,Genbank:YP_169402.1,GeneID:3191453;gbkey=CDS;product=hypothetical protein;protein_id=YP_169402.1;transl_table=11
NC_006570.2	RefSeq	repeat_region	354106	354117	.	-	.	ID=id63;Note=ISFtu1 12bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	gene	354205	354989	.	-	.	ID=gene362;Name=isftu1;Dbxref=GeneID:3191882;gbkey=Gene;gene=isftu1;locus_tag=FTT_0355c
NC_006570.2	RefSeq	CDS	354663	354989	.	-	0	ID=cds319;Name=YP_169403.1;Parent=gene362;Note=ISFtu1. Transposase%2C member of the IS630 Tc-1 mariner family. Identical to Q93EJ6  transposase from Francisella tularensis %28118 aa%29 from aa 144-261. Identical to Q93EJ7  transposase from Francisella tularensis %28126 aa%29 from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF%27s. ORF1 %28identical to Q93EJ7%29 contains a programmed ribosomal frameshifting motif%2C 5%27-AAAAAAAG-3%27 at aa position 109 which permits frameshifting to ORF2 %28identical to Q93EJ6%29 to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family%2C and also mariner elements%2C show that this transposase shares strongly conserved residues%2C including a fully conserved dipeptide%2CAsp-Glu %28DE%29%2C and a block consisting of a fully conserved Asp and highly conserved Glu%2C separated by 34 or 35 residues %28D35E%29. The conserved dipeptide is only present if ribosomal frameshifting occurs.;Dbxref=UniProtKB%2FTrEMBL:Q5NIH2,Genbank:YP_169403.1,GeneID:3191882;gbkey=CDS;product=transposase;protein_id=YP_169403.1;transl_table=11
NC_006570.2	RefSeq	CDS	354205	354663	.	-	0	ID=cds319;Name=YP_169403.1;Parent=gene362;Note=ISFtu1. Transposase%2C member of the IS630 Tc-1 mariner family. Identical to Q93EJ6  transposase from Francisella tularensis %28118 aa%29 from aa 144-261. Identical to Q93EJ7  transposase from Francisella tularensis %28126 aa%29 from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF%27s. ORF1 %28identical to Q93EJ7%29 contains a programmed ribosomal frameshifting motif%2C 5%27-AAAAAAAG-3%27 at aa position 109 which permits frameshifting to ORF2 %28identical to Q93EJ6%29 to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family%2C and also mariner elements%2C show that this transposase shares strongly conserved residues%2C including a fully conserved dipeptide%2CAsp-Glu %28DE%29%2C and a block consisting of a fully conserved Asp and highly conserved Glu%2C separated by 34 or 35 residues %28D35E%29. The conserved dipeptide is only present if ribosomal frameshifting occurs.;Dbxref=UniProtKB%2FTrEMBL:Q5NIH2,Genbank:YP_169403.1,GeneID:3191882;gbkey=CDS;product=transposase;protein_id=YP_169403.1;transl_table=11
NC_006570.2	RefSeq	repeat_region	355026	355041	.	-	.	ID=id64;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	355042	355053	.	-	.	ID=id65;Note=ISFtu1 12bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	gene	355151	357037	.	+	.	ID=gene363;Name=htpG;Dbxref=GeneID:3191490;gbkey=Gene;gene=htpG;locus_tag=FTT_0356
NC_006570.2	RefSeq	CDS	355151	357037	.	+	0	ID=cds320;Name=YP_169404.1;Parent=gene363;Note=molecular chaperone;Dbxref=GOA:Q5NHT8,InterPro:IPR003594,UniProtKB%2FSwiss-Prot:Q5NHT8,Genbank:YP_169404.1,GeneID:3191490;gbkey=CDS;product=heat shock protein 90;protein_id=YP_169404.1;transl_table=11
NC_006570.2	RefSeq	repeat_region	357262	357273	.	-	.	ID=id66;Note=ISFtu1 12bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	gene	357361	358145	.	-	.	ID=gene364;Name=isftu1;Dbxref=GeneID:3192206;gbkey=Gene;gene=isftu1;locus_tag=FTT_0357c
NC_006570.2	RefSeq	CDS	357819	358145	.	-	0	ID=cds321;Name=YP_169405.1;Parent=gene364;Note=ISFtu1. Transposase%2C member of the IS630 Tc-1 mariner family. Identical to Q93EJ6  transposase from Francisella tularensis %28118 aa%29 from aa 144-261. Identical to Q93EJ7  transposase from Francisella tularensis %28126 aa%29 from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF%27s. ORF1 %28identical to Q93EJ7%29 contains a programmed ribosomal frameshifting motif%2C 5%27-AAAAAAAG-3%27 at aa position 109 which permits frameshifting to ORF2 %28identical to Q93EJ6%29 to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family%2C and also mariner elements%2C show that this transposase shares strongly conserved residues%2C including a fully conserved dipeptide%2CAsp-Glu %28DE%29%2C and a block consisting of a fully conserved Asp and highly conserved Glu%2C separated by 34 or 35 residues %28D35E%29. The conserved dipeptide is only present if ribosomal frameshifting occurs.;Dbxref=UniProtKB%2FTrEMBL:Q5NIH2,Genbank:YP_169405.1,GeneID:3192206;gbkey=CDS;product=transposase;protein_id=YP_169405.1;transl_table=11
NC_006570.2	RefSeq	CDS	357361	357819	.	-	0	ID=cds321;Name=YP_169405.1;Parent=gene364;Note=ISFtu1. Transposase%2C member of the IS630 Tc-1 mariner family. Identical to Q93EJ6  transposase from Francisella tularensis %28118 aa%29 from aa 144-261. Identical to Q93EJ7  transposase from Francisella tularensis %28126 aa%29 from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF%27s. ORF1 %28identical to Q93EJ7%29 contains a programmed ribosomal frameshifting motif%2C 5%27-AAAAAAAG-3%27 at aa position 109 which permits frameshifting to ORF2 %28identical to Q93EJ6%29 to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family%2C and also mariner elements%2C show that this transposase shares strongly conserved residues%2C including a fully conserved dipeptide%2CAsp-Glu %28DE%29%2C and a block consisting of a fully conserved Asp and highly conserved Glu%2C separated by 34 or 35 residues %28D35E%29. The conserved dipeptide is only present if ribosomal frameshifting occurs.;Dbxref=UniProtKB%2FTrEMBL:Q5NIH2,Genbank:YP_169405.1,GeneID:3192206;gbkey=CDS;product=transposase;protein_id=YP_169405.1;transl_table=11
NC_006570.2	RefSeq	repeat_region	358166	358181	.	-	.	ID=id67;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	358182	358197	.	-	.	ID=id68;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	358198	358209	.	-	.	ID=id69;Note=ISFtu1 12bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	gene	358209	359356	.	+	.	ID=gene365;Name=FTT_0358;Dbxref=GeneID:3191451;gbkey=Gene;locus_tag=FTT_0358;pseudo=true
NC_006570.2	RefSeq	gene	359413	359883	.	+	.	ID=gene366;Name=FTT_0359;Dbxref=GeneID:3191450;gbkey=Gene;locus_tag=FTT_0359
NC_006570.2	RefSeq	CDS	359413	359883	.	+	0	ID=cds322;Name=YP_169406.1;Parent=gene366;Note=ORF ftt0359;Dbxref=UniProtKB%2FTrEMBL:Q5NHT6,Genbank:YP_169406.1,GeneID:3191450;gbkey=CDS;product=hypothetical protein;protein_id=YP_169406.1;transl_table=11
NC_006570.2	RefSeq	gene	360020	360844	.	+	.	ID=gene367;Name=FTT_0360;Dbxref=GeneID:3191448;gbkey=Gene;locus_tag=FTT_0360
NC_006570.2	RefSeq	CDS	360020	360844	.	+	0	ID=cds323;Name=YP_169407.1;Parent=gene367;Note=Similar to Q82V84 Short-chain dehydrogenase%2Freductase %28SDR%29 superfamily from Nitrosomonas europaea %28279 aa%29. FASTA: opt: 829 Z-score: 982.8 E%28%29: 7.5e-47 Smith-Waterman score: 829%3B 49.632 identity in 272 aa overlap ORF ftt0360;Dbxref=GOA:Q5NHT5,InterPro:IPR016040,UniProtKB%2FTrEMBL:Q5NHT5,Genbank:YP_169407.1,GeneID:3191448;gbkey=CDS;product=short-chain dehydrogenase;protein_id=YP_169407.1;transl_table=11
NC_006570.2	RefSeq	gene	360866	362215	.	-	.	ID=gene368;Name=FTT_0361c;Dbxref=GeneID:3191447;gbkey=Gene;locus_tag=FTT_0361c
NC_006570.2	RefSeq	CDS	360866	362215	.	-	0	ID=cds324;Name=YP_169408.1;Parent=gene368;Note=Similar to Q8Z506  amino acid transporter from Salmonella typhi %28473 aa%29. FASTA: opt: 717 Z-score: 754.8 E%28%29: 3.8e-34 Smith-Waterman score: 755%3B 29.783 identity in 460 aa overlap ORF ftt0361c;Dbxref=GOA:Q5NHT4,InterPro:IPR004841,UniProtKB%2FTrEMBL:Q5NHT4,Genbank:YP_169408.1,GeneID:3191447;gbkey=CDS;product=amino acid transporter;protein_id=YP_169408.1;transl_table=11
NC_006570.2	RefSeq	gene	362474	363346	.	-	.	ID=gene369;Name=FTT_0362c;Dbxref=GeneID:3191445;gbkey=Gene;locus_tag=FTT_0362c
NC_006570.2	RefSeq	CDS	362474	363346	.	-	0	ID=cds325;Name=YP_169409.1;Parent=gene369;Note=ORF ftt0362c;Dbxref=UniProtKB%2FTrEMBL:Q5NHT3,Genbank:YP_169409.1,GeneID:3191445;gbkey=CDS;product=hypothetical protein;protein_id=YP_169409.1;transl_table=11
NC_006570.2	RefSeq	repeat_region	363450	363461	.	+	.	ID=id70;Note=ISFtu1 12bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	363462	363477	.	+	.	ID=id71;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	363478	363493	.	+	.	ID=id72;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;gbkey=repeat_region
NC_006570.2	RefSeq	gene	363514	364298	.	+	.	ID=gene370;Name=isftu1;Dbxref=GeneID:3192291;gbkey=Gene;gene=isftu1;locus_tag=FTT_0363
NC_006570.2	RefSeq	CDS	363514	363840	.	+	0	ID=cds326;Name=YP_169410.1;Parent=gene370;Note=ISFtu1. Transposase%2C member of the IS630 Tc-1 mariner family. Identical to Q93EJ6  transposase from Francisella tularensis %28118 aa%29 from aa 144-261. Identical to Q93EJ7  transposase from Francisella tularensis %28126 aa%29 from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF%27s. ORF1 %28identical to Q93EJ7%29 contains a programmed ribosomal frameshifting motif%2C 5%27-AAAAAAAG-3%27 at aa position 109 which permits frameshifting to ORF2 %28identical to Q93EJ6%29 to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family%2C and also mariner elements%2C show that this transposase shares strongly conserved residues%2C including a fully conserved dipeptide%2CAsp-Glu %28DE%29%2C and a block consisting of a fully conserved Asp and highly conserved Glu%2C separated by 34 or 35 residues %28D35E%29. The conserved dipeptide is only present if ribosomal frameshifting occurs.;Dbxref=UniProtKB%2FTrEMBL:Q5NIH2,Genbank:YP_169410.1,GeneID:3192291;gbkey=CDS;product=transposase;protein_id=YP_169410.1;transl_table=11
NC_006570.2	RefSeq	CDS	363840	364298	.	+	0	ID=cds326;Name=YP_169410.1;Parent=gene370;Note=ISFtu1. Transposase%2C member of the IS630 Tc-1 mariner family. Identical to Q93EJ6  transposase from Francisella tularensis %28118 aa%29 from aa 144-261. Identical to Q93EJ7  transposase from Francisella tularensis %28126 aa%29 from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF%27s. ORF1 %28identical to Q93EJ7%29 contains a programmed ribosomal frameshifting motif%2C 5%27-AAAAAAAG-3%27 at aa position 109 which permits frameshifting to ORF2 %28identical to Q93EJ6%29 to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family%2C and also mariner elements%2C show that this transposase shares strongly conserved residues%2C including a fully conserved dipeptide%2CAsp-Glu %28DE%29%2C and a block consisting of a fully conserved Asp and highly conserved Glu%2C separated by 34 or 35 residues %28D35E%29. The conserved dipeptide is only present if ribosomal frameshifting occurs.;Dbxref=UniProtKB%2FTrEMBL:Q5NIH2,Genbank:YP_169410.1,GeneID:3192291;gbkey=CDS;product=transposase;protein_id=YP_169410.1;transl_table=11
NC_006570.2	RefSeq	repeat_region	364386	364397	.	+	.	ID=id73;Note=ISFtu1 12bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	gene	364422	364871	.	-	.	ID=gene371;Name=FTT_0364c;Dbxref=GeneID:3191446;gbkey=Gene;locus_tag=FTT_0364c
NC_006570.2	RefSeq	CDS	364422	364871	.	-	0	ID=cds327;Name=YP_169411.1;Parent=gene371;Note=ORF ftt0364c;Dbxref=UniProtKB%2FTrEMBL:Q5NHT1,Genbank:YP_169411.1,GeneID:3191446;gbkey=CDS;product=hypothetical protein;protein_id=YP_169411.1;transl_table=11
NC_006570.2	RefSeq	gene	365352	366083	.	+	.	ID=gene372;Name=poxF;Dbxref=GeneID:3191544;gbkey=Gene;gene=poxF;locus_tag=FTT_0365
NC_006570.2	RefSeq	CDS	365352	366083	.	+	0	ID=cds328;Name=YP_169412.1;Parent=gene372;Note=Similar to Q8PFB8 Phenol hydroxylase from Xanthomonas axonopodis %28365 aa%29. FASTA: opt: 567 Z-score: 717.5 E%28%29: 4.5e-32 Smith-Waterman score: 567%3B 38.211 identity in 246 aa overlap The protein seems to be shorter %28%3C115 aa%29 than the matching proteins.;Dbxref=GOA:Q5NHT0,InterPro:IPR017927,UniProtKB%2FTrEMBL:Q5NHT0,Genbank:YP_169412.1,GeneID:3191544;gbkey=CDS;product=phenol hydroxylase;protein_id=YP_169412.1;transl_table=11
NC_006570.2	RefSeq	gene	366205	366420	.	+	.	ID=gene373;Name=rpmE;Dbxref=GeneID:3191990;gbkey=Gene;gene=rpmE;locus_tag=FTT_0366
NC_006570.2	RefSeq	CDS	366205	366420	.	+	0	ID=cds329;Name=YP_169413.1;Parent=gene373;Note=RpmE%3B there appears to be two types of ribosomal proteins L31 in bacterial genomes%3B some contain a CxxC motif while others do not%3B Bacillus subtilis has both types%3B the proteins in this cluster have the CXXC motif%3B RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth%3B expression of ytiA is controlled by a zinc-specific transcriptional repressor%3B RpmE contains one zinc ion and a CxxC motif is responsible for this binding%3B forms an RNP particle along with proteins L5%2C L18%2C and L25 and 5S rRNA%3B found crosslinked to L2 and L25 and EF-G%3B may be near the peptidyltransferase site of the 50S ribosome;Dbxref=GOA:Q5NHS9,InterPro:IPR002150,UniProtKB%2FSwiss-Prot:Q5NHS9,Genbank:YP_169413.1,GeneID:3191990;gbkey=CDS;product=50S ribosomal protein L31;protein_id=YP_169413.1;transl_table=11
NC_006570.2	RefSeq	gene	366631	368136	.	-	.	ID=gene374;Name=gshA;Dbxref=GeneID:3192547;gbkey=Gene;gene=gshA;locus_tag=FTT_0367c
NC_006570.2	RefSeq	CDS	366631	368136	.	-	0	ID=cds330;Name=YP_169414.1;Parent=gene374;Note=Similar to Q88AR1 Glutamate--cysteine ligase from Pseudomonas syringae %28529 aa%29. FASTA: opt: 1113 Z-score: 1281.1 E%28%29: 1.8e-63 Smith-Waterman score: 1113%3B 39.250 identity in 507 aa overlap;Dbxref=GOA:Q5NHS8,InterPro:IPR007370,UniProtKB%2FTrEMBL:Q5NHS8,Genbank:YP_169414.1,GeneID:3192547;gbkey=CDS;product=glutamate--cysteine ligase;protein_id=YP_169414.1;transl_table=11
NC_006570.2	RefSeq	gene	368189	369733	.	-	.	ID=gene375;Name=mviN;Dbxref=GeneID:3192066;gbkey=Gene;gene=mviN;locus_tag=FTT_0368c
NC_006570.2	RefSeq	CDS	368189	369733	.	-	0	ID=cds331;Name=YP_169415.1;Parent=gene375;Note=Similar to AAO89943 %28Q83ED5%29 Integral membrane protein MviN from Coxiella burnetii %28515 aa%29. FASTA: opt: 836 Z-score: 887.1 E%28%29: 1.6e-41 Smith-Waterman score: 836%3B 30.452 identity in 509 aa overlap;Dbxref=GOA:Q5NHS7,InterPro:IPR004268,UniProtKB%2FTrEMBL:Q5NHS7,Genbank:YP_169415.1,GeneID:3192066;gbkey=CDS;product=virulence factor MviN;protein_id=YP_169415.1;transl_table=11
NC_006570.2	RefSeq	gene	369756	370817	.	-	.	ID=gene376;Name=FTT_0369c;Dbxref=GeneID:3191442;gbkey=Gene;locus_tag=FTT_0369c
NC_006570.2	RefSeq	CDS	369756	370817	.	-	0	ID=cds332;Name=YP_169416.1;Parent=gene376;Note=ORF ftt0369c;Dbxref=GOA:Q5NHS6,InterPro:IPR011990,UniProtKB%2FTrEMBL:Q5NHS6,Genbank:YP_169416.1,GeneID:3191442;gbkey=CDS;product=hypothetical protein;protein_id=YP_169416.1;transl_table=11
NC_006570.2	RefSeq	gene	370900	371310	.	-	.	ID=gene377;Name=yjeE;Dbxref=GeneID:3192380;gbkey=Gene;gene=yjeE;locus_tag=FTT_0370c
NC_006570.2	RefSeq	CDS	370900	371310	.	-	0	ID=cds333;Name=YP_169417.1;Parent=gene377;Note=Similar to Q8Z189 Hypothetical protein yjeE from Salmonella typhi %28153 aa%29. FASTA: opt: 517 Z-score: 623.3 E%28%29: 7.9e-27 Smith-Waterman score: 517%3B 56.489 identity in 131 aa overlap;Dbxref=InterPro:IPR003442,UniProtKB%2FTrEMBL:Q5NHS5,Genbank:YP_169417.1,GeneID:3192380;gbkey=CDS;product=nucleotide-binding protein%2C yjeE;protein_id=YP_169417.1;transl_table=11
NC_006570.2	RefSeq	gene	371288	372469	.	-	.	ID=gene378;Name=folC;Dbxref=GeneID:3191937;gbkey=Gene;gene=folC;locus_tag=FTT_0371c
NC_006570.2	RefSeq	CDS	371288	372469	.	-	0	ID=cds334;Name=YP_169418.1;Parent=gene378;Note=Similar to Q8ECR5 FolC bifunctional protein from Shewanella oneidensis %28431 aa%29. FASTA: opt: 507 Z-score: 630.2 E%28%29: 3.3e-27 Smith-Waterman score: 627%3B 32.274 identity in 409 aa overlap;Dbxref=GOA:Q5NHS4,InterPro:IPR013221,UniProtKB%2FTrEMBL:Q5NHS4,Genbank:YP_169418.1,GeneID:3191937;gbkey=CDS;product=bifunctional folylpolyglutamate synthase%2F dihydrofolate synthase;protein_id=YP_169418.1;transl_table=11
NC_006570.2	RefSeq	gene	372484	373392	.	-	.	ID=gene379;Name=accD;Dbxref=GeneID:3191466;gbkey=Gene;gene=accD;locus_tag=FTT_0372c
NC_006570.2	RefSeq	CDS	372484	373392	.	-	0	ID=cds335;Name=YP_169419.1;Parent=gene379;Note=Similar to Q8XFJ5 Acetyl-CoA carboxylase beta subunit from Salmonella typhi %28304 aa%29. FASTA: opt: 1197 Z-score: 1430.2 E%28%29: 9.1e-72 Smith-Waterman score: 1197%3B 62.116 identity in 293 aa overlap;Dbxref=GOA:Q5NHS3,InterPro:IPR011762,UniProtKB%2FTrEMBL:Q5NHS3,Genbank:YP_169419.1,GeneID:3191466;gbkey=CDS;product=Acetyl-CoA carboxylase beta subunit;protein_id=YP_169419.1;transl_table=11
NC_006570.2	RefSeq	gene	373428	373850	.	-	.	ID=gene380;Name=ndk;Dbxref=GeneID:3191686;gbkey=Gene;gene=ndk;locus_tag=FTT_0373c
NC_006570.2	RefSeq	CDS	373428	373850	.	-	0	ID=cds336;Name=YP_169420.1;Parent=gene380;Note=catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate;Dbxref=GOA:Q5NHS2,InterPro:IPR001564,UniProtKB%2FSwiss-Prot:Q5NHS2,Genbank:YP_169420.1,GeneID:3191686;gbkey=CDS;product=nucleoside diphosphate kinase;protein_id=YP_169420.1;transl_table=11
NC_006570.2	RefSeq	gene	373923	375563	.	-	.	ID=gene381;Name=pyrG;Dbxref=GeneID:3191651;gbkey=Gene;gene=pyrG;locus_tag=FTT_0374c
NC_006570.2	RefSeq	CDS	373923	375563	.	-	0	ID=cds337;Name=YP_169421.1;Parent=gene381;Note=CTP synthase%3B cytidine triphosphate synthetase%3B catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen%3B in Escherichia coli this enzyme forms a homotetramer;Dbxref=GOA:Q5NHS1,InterPro:IPR017926,UniProtKB%2FSwiss-Prot:Q5NHS1,Genbank:YP_169421.1,GeneID:3191651;gbkey=CDS;product=CTP synthetase;protein_id=YP_169421.1;transl_table=11
NC_006570.2	RefSeq	gene	375879	377243	.	+	.	ID=gene382;Name=FTT_0375;Dbxref=GeneID:3191443;gbkey=Gene;locus_tag=FTT_0375;pseudo=true
NC_006570.2	RefSeq	gene	377481	378539	.	-	.	ID=gene383;Name=FTT_0376c;Dbxref=GeneID:3191440;gbkey=Gene;locus_tag=FTT_0376c
NC_006570.2	RefSeq	CDS	377481	378539	.	-	0	ID=cds338;Name=YP_169422.1;Parent=gene383;Note=Weak hits at position aa 250-350 to many cytochrome oxidase subunit I eg:%28Q85L50%29. ORF ftt0376c;Dbxref=UniProtKB%2FTrEMBL:Q5NHS0,Genbank:YP_169422.1,GeneID:3191440;gbkey=CDS;product=hypothetical protein;protein_id=YP_169422.1;transl_table=11
NC_006570.2	RefSeq	repeat_region	378842	378853	.	+	.	ID=id74;Note=ISFtu1 12bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	378854	378869	.	+	.	ID=id75;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	378870	378885	.	+	.	ID=id76;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;gbkey=repeat_region
NC_006570.2	RefSeq	gene	378906	379690	.	+	.	ID=gene384;Name=isftu1;Dbxref=GeneID:3192115;gbkey=Gene;gene=isftu1;locus_tag=FTT_0377
NC_006570.2	RefSeq	CDS	378906	379235	.	+	0	ID=cds339;Name=YP_169423.1;Parent=gene384;Note=ISFtu1. Transposase%2C member of the IS630 Tc-1 mariner family. Identical to Q93EJ6  transposase from Francisella tularensis %28118 aa%29 from aa 144-261. Identical to Q93EJ7  transposase from Francisella tularensis %28126 aa%29 from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF%27s. ORF1 %28identical to Q93EJ7%29 contains a programmed ribosomal frameshifting motif%2C 5%27-AAAAAAAG-3%27 at aa position 109 which permits frameshifting to ORF2 %28identical to Q93EJ6%29 to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family%2C and also mariner elements%2C show that this transposase shares strongly conserved residues%2C including a fully conserved dipeptide%2CAsp-Glu %28DE%29%2C and a block consisting of a fully conserved Asp and highly conserved Glu%2C separated by 34 or 35 residues %28D35E%29. The conserved dipeptide is only present if ribosomal frameshifting occurs.;Dbxref=UniProtKB%2FTrEMBL:Q5NIH2,Genbank:YP_169423.1,GeneID:3192115;gbkey=CDS;product=transposase;protein_id=YP_169423.1;transl_table=11
NC_006570.2	RefSeq	CDS	379235	379690	.	+	0	ID=cds339;Name=YP_169423.1;Parent=gene384;Note=ISFtu1. Transposase%2C member of the IS630 Tc-1 mariner family. Identical to Q93EJ6  transposase from Francisella tularensis %28118 aa%29 from aa 144-261. Identical to Q93EJ7  transposase from Francisella tularensis %28126 aa%29 from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF%27s. ORF1 %28identical to Q93EJ7%29 contains a programmed ribosomal frameshifting motif%2C 5%27-AAAAAAAG-3%27 at aa position 109 which permits frameshifting to ORF2 %28identical to Q93EJ6%29 to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family%2C and also mariner elements%2C show that this transposase shares strongly conserved residues%2C including a fully conserved dipeptide%2CAsp-Glu %28DE%29%2C and a block consisting of a fully conserved Asp and highly conserved Glu%2C separated by 34 or 35 residues %28D35E%29. The conserved dipeptide is only present if ribosomal frameshifting occurs.;Dbxref=UniProtKB%2FTrEMBL:Q5NIH2,Genbank:YP_169423.1,GeneID:3192115;gbkey=CDS;product=transposase;protein_id=YP_169423.1;transl_table=11
NC_006570.2	RefSeq	repeat_region	379778	379789	.	+	.	ID=id77;Note=ISFtu1 12bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	gene	379982	380977	.	-	.	ID=gene385;Name=FTT_0378c;Dbxref=GeneID:3191439;gbkey=Gene;locus_tag=FTT_0378c
NC_006570.2	RefSeq	CDS	379982	380977	.	-	0	ID=cds340;Name=YP_169424.1;Parent=gene385;Note=Duplicate of FTT0354 and FTT1263 ORF ftt0378c;Dbxref=InterPro:IPR007577,UniProtKB%2FTrEMBL:Q5NHR8,Genbank:YP_169424.1,GeneID:3191439;gbkey=CDS;product=hypothetical protein;protein_id=YP_169424.1;transl_table=11
NC_006570.2	RefSeq	gene	381347	381820	.	+	.	ID=gene386;Name=isftu2;Dbxref=GeneID:3192290;gbkey=Gene;gene=isftu2;locus_tag=FTT_0379;pseudo=true
NC_006570.2	RefSeq	repeat_region	381828	381846	.	+	.	ID=id78;Note=ISFtu2 19bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	381859	381874	.	-	.	ID=id79;Note=ISFtu1 16bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	381875	381886	.	-	.	ID=id80;Note=ISFtu1 12bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	gene	382014	383363	.	-	.	ID=gene387;Name=gdh;Dbxref=GeneID:3191583;gbkey=Gene;gene=gdh;locus_tag=FTT_0380c
NC_006570.2	RefSeq	CDS	382014	383363	.	-	0	ID=cds341;Name=YP_169425.1;Parent=gene387;Note=converts 2-oxoglutarate to glutamate%3B in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction%3B uses NADPH%3B forms a homohexamer;Dbxref=GOA:Q5NHR7,InterPro:IPR016040,UniProtKB%2FTrEMBL:Q5NHR7,Genbank:YP_169425.1,GeneID:3191583;gbkey=CDS;product=glutamate dehydrogenase;protein_id=YP_169425.1;transl_table=11
NC_006570.2	RefSeq	repeat_region	383607	383625	.	+	.	ID=id81;Note=ISFtu2 19bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	gene	383702	384445	.	+	.	ID=gene388;Name=isftu2;Dbxref=GeneID:3192483;gbkey=Gene;gene=isftu2;locus_tag=FTT_0381
NC_006570.2	RefSeq	CDS	383702	384445	.	+	0	ID=cds342;Name=YP_169426.1;Parent=gene388;Note=ISFtu2. Transposase%2C member of the IS5 family. Identical to Q8GM03  transposase from Francisella tularensis %28247 aa%29.;Dbxref=GOA:Q8GM03,InterPro:IPR002559,UniProtKB%2FTrEMBL:Q8GM03,Genbank:YP_169426.1,GeneID:3192483;gbkey=CDS;product=transposase;protein_id=YP_169426.1;transl_table=11
NC_006570.2	RefSeq	repeat_region	384453	384471	.	+	.	ID=id82;Note=ISFtu2 19bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	gene	384570	384674	.	+	.	ID=gene389;Name=FTT_0382;Dbxref=GeneID:3191437;gbkey=Gene;locus_tag=FTT_0382
NC_006570.2	RefSeq	CDS	384570	384674	.	+	0	ID=cds343;Name=YP_169427.1;Parent=gene389;Note=ORF ftt0382;Dbxref=UniProtKB%2FTrEMBL:Q5NHR5,Genbank:YP_169427.1,GeneID:3191437;gbkey=CDS;product=hypothetical protein;protein_id=YP_169427.1;transl_table=11
NC_006570.2	RefSeq	gene	385685	386020	.	+	.	ID=gene390;Name=FTT_0383;Dbxref=GeneID:3191438;gbkey=Gene;locus_tag=FTT_0383
NC_006570.2	RefSeq	CDS	385685	386020	.	+	0	ID=cds344;Name=YP_169428.1;Parent=gene390;Note=ORF ftt0383;Dbxref=UniProtKB%2FTrEMBL:Q5NHR4,Genbank:YP_169428.1,GeneID:3191438;gbkey=CDS;product=hypothetical protein;protein_id=YP_169428.1;transl_table=11
NC_006570.2	RefSeq	gene	385993	386844	.	-	.	ID=gene391;Name=psd;Dbxref=GeneID:3191677;gbkey=Gene;gene=psd;locus_tag=FTT_0384c
NC_006570.2	RefSeq	CDS	385993	386844	.	-	0	ID=cds345;Name=YP_169429.2;Parent=gene391;Note=catalyzes the decarboxylation of phosphatidyl-L-serine to phosphatidylethanoleamine;Dbxref=GOA:Q5NHR3,InterPro:IPR005221,UniProtKB%2FSwiss-Prot:Q5NHR3,Genbank:YP_169429.2,GeneID:3191677;gbkey=CDS;product=phosphatidylserine decarboxylase;protein_id=YP_169429.2;transl_table=11
NC_006570.2	RefSeq	gene	386944	387924	.	+	.	ID=gene392;Name=FTT_0385;Dbxref=GeneID:3191436;gbkey=Gene;locus_tag=FTT_0385
NC_006570.2	RefSeq	CDS	386944	387924	.	+	0	ID=cds346;Name=YP_169430.1;Parent=gene392;Note=ORF ftt0385;Dbxref=UniProtKB%2FTrEMBL:Q5NHR2,Genbank:YP_169430.1,GeneID:3191436;gbkey=CDS;product=hypothetical protein;protein_id=YP_169430.1;transl_table=11
NC_006570.2	RefSeq	gene	387933	388976	.	+	.	ID=gene393;Name=nadM;Dbxref=GeneID:3192435;gbkey=Gene;gene=nadM;locus_tag=FTT_0386
NC_006570.2	RefSeq	CDS	387933	388976	.	+	0	ID=cds347;Name=YP_169431.1;Parent=gene393;Note=NadM-Nudix subfamily%3B involved in creation of nicotanimide adenine dinucleotide NAD from either biosynthetic or salvage pathways;Dbxref=GOA:Q5NHR1,InterPro:IPR014729,UniProtKB%2FTrEMBL:Q5NHR1,Genbank:YP_169431.1,GeneID:3192435;gbkey=CDS;product=bifunctional nicotinamide mononucleotide adenylyltransferase%2FADP-ribose pyrophosphatase;protein_id=YP_169431.1;transl_table=11
NC_006570.2	RefSeq	gene	388990	390357	.	+	.	ID=gene394;Name=glmU;Dbxref=GeneID:3191075;gbkey=Gene;gene=glmU;locus_tag=FTT_0387
NC_006570.2	RefSeq	CDS	388990	390357	.	+	0	ID=cds348;Name=YP_169432.1;Parent=gene394;Note=Similar to Q9KNH7 UDP-N-acetylglucosamine pyrophosphorylase from Vibrio cholerae %28453 aa%29. FASTA: opt: 1597 Z-score: 1863.6 E%28%29: 6.5e-96 Smith-Waterman score: 1597%3B 53.201 identity in 453 aa overlap;Dbxref=GOA:Q5NHR0,InterPro:IPR018357,UniProtKB%2FSwiss-Prot:Q5NHR0,Genbank:YP_169432.1,GeneID:3191075;gbkey=CDS;product=UDP-N-acetylglucosamine pyrophosphorylase%2Fglucosamine-1-phosphate N-acetyltransferase;protein_id=YP_169432.1;transl_table=11
NC_006570.2	RefSeq	gene	390378	392216	.	+	.	ID=gene395;Name=glmS;Dbxref=GeneID:3192352;gbkey=Gene;gene=glmS;locus_tag=FTT_0388
NC_006570.2	RefSeq	CDS	390378	392216	.	+	0	ID=cds349;Name=YP_169433.1;Parent=gene395;Note=Catalyzes the first step in hexosamine metabolism%2C converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source;Dbxref=GOA:Q5NHQ9,InterPro:IPR017932,UniProtKB%2FSwiss-Prot:Q5NHQ9,Genbank:YP_169433.1,GeneID:3192352;gbkey=CDS;product=glucosamine--fructose-6-phosphate aminotransferase;protein_id=YP_169433.1;transl_table=11
NC_006570.2	RefSeq	gene	392300	392824	.	+	.	ID=gene396;Name=FTT_0389;Dbxref=GeneID:3191435;gbkey=Gene;locus_tag=FTT_0389
NC_006570.2	RefSeq	CDS	392300	392824	.	+	0	ID=cds350;Name=YP_169434.1;Parent=gene396;Note=Similar to Q9RWR2 Acetyltransferase%2C %2C from Deinococcus radiodurans %28188 aa%29. FASTA: opt: 188 Z-score: 245.7 E%28%29: 8.5e-06 Smith-Waterman score: 188%3B 28.105 identity in 153 aa overlap ORF ftt0389;Dbxref=GOA:Q5NHQ8,InterPro:IPR016181,UniProtKB%2FTrEMBL:Q5NHQ8,Genbank:YP_169434.1,GeneID:3191435;gbkey=CDS;product=acetyltransferase;protein_id=YP_169434.1;transl_table=11
NC_006570.2	RefSeq	gene	392817	393014	.	-	.	ID=gene397;Name=rpsU;Dbxref=GeneID:3191264;gbkey=Gene;gene=rpsU;locus_tag=FTT_0390c
NC_006570.2	RefSeq	CDS	392817	393014	.	-	0	ID=cds351;Name=YP_169435.1;Parent=gene397;Note=a small basic protein that is one of the last in the subunit assembly%3B omission does not prevent assembly but the subunit is inactive%3B binds central domain of 16S rRNA;Dbxref=GOA:Q5NHQ7,InterPro:IPR018278,UniProtKB%2FSwiss-Prot:Q5NHQ7,Genbank:YP_169435.1,GeneID:3191264;gbkey=CDS;product=30S ribosomal protein S21;protein_id=YP_169435.1;transl_table=11
NC_006570.2	RefSeq	gene	393014	393217	.	-	.	ID=gene398;Name=cspC;Dbxref=GeneID:3191899;gbkey=Gene;gene=cspC;locus_tag=FTT_0391c
NC_006570.2	RefSeq	CDS	393014	393217	.	-	0	ID=cds352;Name=YP_169436.1;Parent=gene398;Note=Similar to Q8D6M5 Cold shock protein from Vibrio vulnificus %2870 aa%29. FASTA: opt: 272 Z-score: 403.6 E%28%29: 1.4e-14 Smith-Waterman score: 272%3B 58.571 identity in 70 aa overlap;Dbxref=GOA:Q5NHQ6,InterPro:IPR012340,UniProtKB%2FTrEMBL:Q5NHQ6,Genbank:YP_169436.1,GeneID:3191899;gbkey=CDS;product=cold shock protein;protein_id=YP_169436.1;transl_table=11
NC_006570.2	RefSeq	gene	393465	393794	.	-	.	ID=gene399;Name=FTT_0392c;Dbxref=GeneID:3191434;gbkey=Gene;locus_tag=FTT_0392c
NC_006570.2	RefSeq	CDS	393465	393794	.	-	0	ID=cds353;Name=YP_169437.1;Parent=gene399;Note=Similar to Q8TT97 Hypothetical protein MA0540 from Methanosarcina mazei %2895 aa%29. FASTA: opt: 151 Z-score: 197.5 E%28%29: 0.0038 Smith-Waterman score: 151%3B 35.789 identity in 95 aa overlap ORF ftt0392c;Dbxref=InterPro:IPR004518,UniProtKB%2FTrEMBL:Q5NHQ5,Genbank:YP_169437.1,GeneID:3191434;gbkey=CDS;product=hypothetical protein;protein_id=YP_169437.1;transl_table=11
NC_006570.2	RefSeq	gene	393921	394691	.	+	.	ID=gene400;Name=map;Dbxref=GeneID:3191507;gbkey=Gene;gene=map;locus_tag=FTT_0393
NC_006570.2	RefSeq	CDS	393921	394691	.	+	0	ID=cds354;Name=YP_169438.1;Parent=gene400;Note=Similar to Q886P4 Methionine aminopeptidase%2Ctype I from Pseudomonas syringae %28260 aa%29. FASTA: opt: 1243 Z-score: 1568.2 E%28%29: 1.9e-79 Smith-Waterman score: 1243%3B 70.120 identity in 251 aa overlap;Dbxref=GOA:Q5NHQ4,InterPro:IPR002467,UniProtKB%2FTrEMBL:Q5NHQ4,Genbank:YP_169438.1,GeneID:3191507;gbkey=CDS;product=methionine aminopeptidase;protein_id=YP_169438.1;transl_table=11
NC_006570.2	RefSeq	gene	394693	395541	.	+	.	ID=gene401;Name=FTT_0394;Dbxref=GeneID:3191432;gbkey=Gene;locus_tag=FTT_0394
NC_006570.2	RefSeq	CDS	394693	395541	.	+	0	ID=cds355;Name=YP_169439.1;Parent=gene401;Note=ORF ftt0394;Dbxref=UniProtKB%2FTrEMBL:Q5NHQ3,Genbank:YP_169439.1,GeneID:3191432;gbkey=CDS;product=hypothetical protein;protein_id=YP_169439.1;transl_table=11
NC_006570.2	RefSeq	gene	395587	396300	.	+	.	ID=gene402;Name=FTT_0395;Dbxref=GeneID:3191429;gbkey=Gene;locus_tag=FTT_0395
NC_006570.2	RefSeq	CDS	395587	396300	.	+	0	ID=cds356;Name=YP_169440.1;Parent=gene402;Note=Similar to Q9L5J1 hypothetical protein from Salmonella typhi %28259 aa%29. FASTA: opt: 585 Z-score: 707.5 E%28%29: 1.6e-31 Smith-Waterman score: 680%3B 46.743 identity in 261 aa overlap ORF ftt0395;Dbxref=UniProtKB%2FTrEMBL:Q5NHQ2,Genbank:YP_169440.1,GeneID:3191429;gbkey=CDS;product=hypothetical protein;protein_id=YP_169440.1;transl_table=11
NC_006570.2	RefSeq	gene	396433	398658	.	+	.	ID=gene403;Name=parC;Dbxref=GeneID:3191415;gbkey=Gene;gene=parC;locus_tag=FTT_0396
NC_006570.2	RefSeq	CDS	396433	398658	.	+	0	ID=cds357;Name=YP_169441.1;Parent=gene403;Note=decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling;Dbxref=GOA:Q5NHQ1,InterPro:IPR013758,UniProtKB%2FTrEMBL:Q5NHQ1,Genbank:YP_169441.1,GeneID:3191415;gbkey=CDS;product=DNA topoisomerase IV subunit A;protein_id=YP_169441.1;transl_table=11
NC_006570.2	RefSeq	gene	398658	399344	.	+	.	ID=gene404;Name=mtn;Dbxref=GeneID:3191248;gbkey=Gene;gene=mtn;locus_tag=FTT_0397
NC_006570.2	RefSeq	CDS	398658	399344	.	+	0	ID=cds358;Name=YP_169442.1;Parent=gene404;Note=enables the cleavage of the glycosidic bond in both 5%27-methylthioadenosine and S-adenosylhomocysteine;Dbxref=GOA:Q5NHQ0,InterPro:IPR018017,UniProtKB%2FTrEMBL:Q5NHQ0,Genbank:YP_169442.1,GeneID:3191248;gbkey=CDS;product=5%27-methylthioadenosine%2FS-adenosylhomocysteine nucleosidase;protein_id=YP_169442.1;transl_table=11
NC_006570.2	RefSeq	gene	399331	399930	.	-	.	ID=gene405;Name=FTT_0398c;Dbxref=GeneID:3191430;gbkey=Gene;locus_tag=FTT_0398c
NC_006570.2	RefSeq	CDS	399331	399930	.	-	0	ID=cds359;Name=YP_169443.1;Parent=gene405;Note=ORF ftt0398c;Dbxref=UniProtKB%2FTrEMBL:Q5NHP9,Genbank:YP_169443.1,GeneID:3191430;gbkey=CDS;product=hypothetical protein;protein_id=YP_169443.1;transl_table=11
NC_006570.2	RefSeq	gene	399923	401041	.	-	.	ID=gene406;Name=FTT_0399c;Dbxref=GeneID:3191433;gbkey=Gene;locus_tag=FTT_0399c
NC_006570.2	RefSeq	CDS	399923	401041	.	-	0	ID=cds360;Name=YP_169444.1;Parent=gene406;Note=Similar to Q885D8 BNR%2FAsp-box repeat protein from Pseudomonas syringae %28432 aa%29. FASTA: opt: 536 Z-score: 654.4 E%28%29: 1.5e-28 Smith-Waterman score: 536%3B 31.922 identity in 307 aa overlap ORF ftt0399c;Dbxref=UniProtKB%2FTrEMBL:Q5NHP8,Genbank:YP_169444.1,GeneID:3191433;gbkey=CDS;product=BNR%2FAsp-box repeat-containing protein;protein_id=YP_169444.1;transl_table=11
NC_006570.2	RefSeq	gene	401240	403216	.	+	.	ID=gene407;Name=slt;Dbxref=GeneID:3190706;gbkey=Gene;gene=slt;locus_tag=FTT_0400
NC_006570.2	RefSeq	CDS	401240	403216	.	+	0	ID=cds361;Name=YP_169445.1;Parent=gene407;Note=Similar to Q88L07 Soluble lytic transglycosylase%2C  from Pseudomonas putida %28657 aa%29. FASTA: opt: 596 Z-score: 646.0 E%28%29: 3.9e-28 Smith-Waterman score: 819%3B 27.822 identity in 629 aa overlap.;Dbxref=GOA:Q5NHP7,InterPro:IPR008939,UniProtKB%2FTrEMBL:Q5NHP7,Genbank:YP_169445.1,GeneID:3190706;gbkey=CDS;product=soluble lytic murein transglycosylase;protein_id=YP_169445.1;transl_table=11
NC_006570.2	RefSeq	gene	403506	404228	.	+	.	ID=gene408;Name=FTT_0401;Dbxref=GeneID:3191427;gbkey=Gene;locus_tag=FTT_0401
NC_006570.2	RefSeq	CDS	403506	404228	.	+	0	ID=cds362;Name=YP_169446.1;Parent=gene408;Note=Partial homology to carboxy terminus of Q9CLV4a Hypothetical protein PM1097 from Pasteurella multocida %28417 aa%29. FASTA: opt: 269 Z-score: 330.3 E%28%29: 1.7e-10 Smith-Waterman score: 269%3B 26.050identity in 238 aa overlap ORF ftt0401;Dbxref=InterPro:IPR018723,UniProtKB%2FTrEMBL:Q5NHP6,Genbank:YP_169446.1,GeneID:3191427;gbkey=CDS;product=hypothetical protein;protein_id=YP_169446.1;transl_table=11
NC_006570.2	RefSeq	gene	404585	408064	.	+	.	ID=gene409;Name=dnaE;Dbxref=GeneID:3191527;gbkey=Gene;gene=dnaE;locus_tag=FTT_0402
NC_006570.2	RefSeq	CDS	404585	408064	.	+	0	ID=cds363;Name=YP_169447.1;Parent=gene409;Note=Similar to DP3A_SALTY %28P14567%29 DNA polymerase III alpha subunit from Salmonella typhimurium %281160 aa%29. FASTA: opt: 3099 Z-score: 3288.3 E%28%29: 2.6e-175 Smith-Waterman score: 3099%3B 44.781identity in 1121 aa overlap.;Dbxref=GOA:Q5NHP5,InterPro:IPR018486,UniProtKB%2FTrEMBL:Q5NHP5,Genbank:YP_169447.1,GeneID:3191527;gbkey=CDS;product=DNA polymerase III subunit alpha;protein_id=YP_169447.1;transl_table=11
NC_006570.2	RefSeq	gene	408140	408775	.	+	.	ID=gene410;Name=def1;Dbxref=GeneID:3191512;gbkey=Gene;gene=def1;locus_tag=FTT_0403
NC_006570.2	RefSeq	CDS	408140	408775	.	+	0	ID=cds364;Name=YP_169448.1;Parent=gene410;Note=Similar to DEF_LEPIN %28Q93LE9%29 Peptide deformylase from Leptospira interrogans %28178 aa%29. FASTA: opt: 312 Z-score: 399.2 E%28%29: 2.4e-14 Smith-Waterman score: 312%3B 35.758 identity in 165 aa overlap;Dbxref=GOA:Q5NHP4,InterPro:IPR000181,UniProtKB%2FTrEMBL:Q5NHP4,Genbank:YP_169448.1,GeneID:3191512;gbkey=CDS;product=peptide deformylase;protein_id=YP_169448.1;transl_table=11
NC_006570.2	RefSeq	gene	408838	408952	.	-	.	ID=gene411;Name=5S rRNA;Dbxref=GeneID:3190959;description=5S rRNA;gbkey=Gene;gene=5S rRNA;locus_tag=FTT_r01
NC_006570.2	RefSeq	rRNA	408838	408952	.	-	.	ID=rna8;Parent=gene411;Note=uncertain boundries;Dbxref=GeneID:3190959;gbkey=rRNA;product=5S ribosomal RNA
NC_006570.2	RefSeq	exon	408838	408952	.	-	.	ID=id83;Parent=rna8;Note=uncertain boundries;Dbxref=GeneID:3190959;gbkey=rRNA;product=5S ribosomal RNA
NC_006570.2	RefSeq	gene	409479	410741	.	+	.	ID=gene412;Name=lolC;Dbxref=GeneID:3192203;gbkey=Gene;gene=lolC;locus_tag=FTT_0404
NC_006570.2	RefSeq	CDS	409479	410741	.	+	0	ID=cds365;Name=YP_169449.1;Parent=gene412;Note=Similar to Q83CV1  lipoprotein ABC transporter%2Cpermease protein from Coxiella burnetii %28414 aa%29. FASTA: opt: 1273 Z-score: 1436.4 E%28%29: 4.1e-72 Smith-Waterman score: 1273%3B 48.104 identity in 422 aa overlap;Dbxref=GOA:Q5NHP3,InterPro:IPR011925,UniProtKB%2FTrEMBL:Q5NHP3,Genbank:YP_169449.1,GeneID:3192203;gbkey=CDS;product=lipoprotein releasing system%2C subunit C%2C membrane protein;protein_id=YP_169449.1;transl_table=11
NC_006570.2	RefSeq	gene	410734	411429	.	+	.	ID=gene413;Name=lolD;Dbxref=GeneID:3192199;gbkey=Gene;gene=lolD;locus_tag=FTT_0405
NC_006570.2	RefSeq	CDS	410734	411429	.	+	0	ID=cds366;Name=YP_169450.1;Parent=gene413;Note=Similar to LOLD_NEIMA %28P57030%29 Lipoprotein releasing system ATP-binding transport protein from Neisseria meningitidis %28231 aa%29. FASTA: opt: 791 Z-score: 892.8 E%28%29: 7e-42 Smith-Waterman score: 791%3B 51.770 identity in 226 aa overlap;Dbxref=GOA:Q5NHP2,InterPro:IPR017871,UniProtKB%2FSwiss-Prot:Q5NHP2,Genbank:YP_169450.1,GeneID:3192199;gbkey=CDS;product=lipoprotein releasing system%2C subunit D%2C ABC transporter ATP-binding protein;protein_id=YP_169450.1;transl_table=11
NC_006570.2	RefSeq	gene	411546	413687	.	+	.	ID=gene414;Name=cadA;Dbxref=GeneID:3191271;gbkey=Gene;gene=cadA;locus_tag=FTT_0406
NC_006570.2	RefSeq	CDS	411546	413687	.	+	0	ID=cds367;Name=YP_169451.1;Parent=gene414;Note=Similar to DCLY_ECOLI %28P23892%29 Lysine decarboxylase%2C inducible from E. coli %28715 aa%29 FASTA: opt: 2608 Z-score: 3095.0 E%28%29: 1.7e-164 Smith-Waterman score: 2608%3B 53.912 identity in 703 aa overlap;Dbxref=GOA:Q5NHP1,InterPro:IPR015422,UniProtKB%2FTrEMBL:Q5NHP1,Genbank:YP_169451.1,GeneID:3191271;gbkey=CDS;product=lysine decarboxylase%2C inducable;protein_id=YP_169451.1;transl_table=11
NC_006570.2	RefSeq	gene	413779	414855	.	+	.	ID=gene415;Name=gcvT;Dbxref=GeneID:3192518;gbkey=Gene;gene=gcvT;locus_tag=FTT_0407
NC_006570.2	RefSeq	CDS	413779	414855	.	+	0	ID=cds368;Name=YP_169452.1;Parent=gene415;Note=catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate%2C causing the release of ammonia and the generation of reduced GcvH protein;Dbxref=GOA:Q5NHP0,InterPro:IPR013977,UniProtKB%2FSwiss-Prot:Q5NHP0,Genbank:YP_169452.1,GeneID:3192518;gbkey=CDS;product=glycine cleavage system aminomethyltransferase T;protein_id=YP_169452.1;transl_table=11
NC_006570.2	RefSeq	gene	414911	415294	.	+	.	ID=gene416;Name=gcvH1;Dbxref=GeneID:3191553;gbkey=Gene;gene=gcvH1;locus_tag=FTT_0408
NC_006570.2	RefSeq	CDS	414911	415294	.	+	0	ID=cds369;Name=YP_169453.1;Parent=gene416;Note=Similar to Q8FE66 Glycine cleavage system H protein from E coli %28130 aa%29. FASTA: opt: 526 Z-score: 699.9 E%28%29: 4.3e-31 Smith-Waterman score: 526%3B 60.938 identity in 128 aa overlap;Dbxref=GOA:Q5NHN9,InterPro:IPR017453,UniProtKB%2FTrEMBL:Q5NHN9,Genbank:YP_169453.1,GeneID:3191553;gbkey=CDS;product=glycine cleavage system H protein;protein_id=YP_169453.1;transl_table=11
NC_006570.2	RefSeq	gene	415358	416725	.	+	.	ID=gene417;Name=gcvP1;Dbxref=GeneID:3192502;gbkey=Gene;gene=gcvP1;locus_tag=FTT_0409
NC_006570.2	RefSeq	CDS	415358	416725	.	+	0	ID=cds370;Name=YP_169454.1;Parent=gene417;Note=acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine%3B forms a heterodimer with subunit 2 to form the P protein;Dbxref=GOA:Q5NHN8,InterPro:IPR015421,UniProtKB%2FSwiss-Prot:Q5NHN8,Genbank:YP_169454.1,GeneID:3192502;gbkey=CDS;product=glycine dehydrogenase subunit 1;protein_id=YP_169454.1;transl_table=11
NC_006570.2	RefSeq	gene	416731	418176	.	+	.	ID=gene418;Name=gcvP2;Dbxref=GeneID:3192315;gbkey=Gene;gene=gcvP2;locus_tag=FTT_0410
NC_006570.2	RefSeq	CDS	416731	418176	.	+	0	ID=cds371;Name=YP_169455.1;Parent=gene418;Note=acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine%3B forms a heterodimer with subunit 1 to form the P protein;Dbxref=GOA:Q5NHN7,InterPro:IPR015421,UniProtKB%2FTrEMBL:Q5NHN7,Genbank:YP_169455.1,GeneID:3192315;gbkey=CDS;product=glycine dehydrogenase subunit 2;protein_id=YP_169455.1;transl_table=11
NC_006570.2	RefSeq	gene	418296	419141	.	-	.	ID=gene419;Name=aroE2;Dbxref=GeneID:3190949;gbkey=Gene;gene=aroE2;locus_tag=FTT_0411c
NC_006570.2	RefSeq	CDS	418296	419141	.	-	0	ID=cds372;Name=YP_169456.1;Parent=gene419;Note=Similar to Q8FQC7  shikimate 5-dehydrogenase from Corynebacterium efficiens%28269 aa%29. FASTA: opt: 283 Z-score: 321.7 E%28%29: 4.6e-10 Smith-Waterman score: 287%3B 28.077 identity in 260 aa overlap.;Dbxref=GOA:Q5NHN6,InterPro:IPR013708,UniProtKB%2FTrEMBL:Q5NHN6,Genbank:YP_169456.1,GeneID:3190949;gbkey=CDS;product=shikimate 5-dehydrogenase;protein_id=YP_169456.1;transl_table=11
NC_006570.2	RefSeq	gene	419167	422379	.	-	.	ID=gene420;Name=pulB;Dbxref=GeneID:3191967;gbkey=Gene;gene=pulB;locus_tag=FTT_0412c
NC_006570.2	RefSeq	CDS	419167	422379	.	-	0	ID=cds373;Name=YP_169457.1;Parent=gene420;Note=Similar to Q8XK16 Pullulanase from Clostridium perfringens %281064 aa%29. FASTA: opt: 3419 Z-score: 3958.4 E%28%29: 1.4e-212 Smith-Waterman score: 3419%3B 48.369identity in 1042 aa overlap Other FASTA hits have lower scores due to generally being smaller in size. Q8XK16 is an electronic annotation;Dbxref=GOA:Q5NHN5,InterPro:IPR013781,UniProtKB%2FTrEMBL:Q5NHN5,Genbank:YP_169457.1,GeneID:3191967;gbkey=CDS;product=pullulonase;protein_id=YP_169457.1;transl_table=11
NC_006570.2	RefSeq	gene	422413	424335	.	-	.	ID=gene421;Name=glgB;Dbxref=GeneID:3190770;gbkey=Gene;gene=glgB;locus_tag=FTT_0413c
NC_006570.2	RefSeq	CDS	422413	424335	.	-	0	ID=cds374;Name=YP_169458.1;Parent=gene421;Note=catalyzes the transfer of a segment of a 1%2C4-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain;Dbxref=GOA:Q5NHN4,InterPro:IPR013783,UniProtKB%2FSwiss-Prot:Q5NHN4,Genbank:YP_169458.1,GeneID:3190770;gbkey=CDS;product=glycogen branching protein;protein_id=YP_169458.1;transl_table=11
NC_006570.2	RefSeq	gene	424637	426271	.	+	.	ID=gene422;Name=pgm;Dbxref=GeneID:3191363;gbkey=Gene;gene=pgm;locus_tag=FTT_0414
NC_006570.2	RefSeq	CDS	424637	426271	.	+	0	ID=cds375;Name=YP_169459.1;Parent=gene422;Note=catalyzes the interconversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate;Dbxref=GOA:Q5NHN3,InterPro:IPR016066,UniProtKB%2FTrEMBL:Q5NHN3,Genbank:YP_169459.1,GeneID:3191363;gbkey=CDS;product=phosphoglucomutase;protein_id=YP_169459.1;transl_table=11
NC_006570.2	RefSeq	gene	426305	427574	.	+	.	ID=gene423;Name=glgC;Dbxref=GeneID:3190967;gbkey=Gene;gene=glgC;locus_tag=FTT_0415;pseudo=true
NC_006570.2	RefSeq	gene	427587	429056	.	+	.	ID=gene424;Name=glgA;Dbxref=GeneID:3192504;gbkey=Gene;gene=glgA;locus_tag=FTT_0416
NC_006570.2	RefSeq	CDS	427587	429056	.	+	0	ID=cds376;Name=YP_169460.1;Parent=gene424;Note=catalyzes the formation of alpha-1%2C4-glucan chains from ADP-glucose;Dbxref=GOA:Q5NHN2,InterPro:IPR013534,UniProtKB%2FSwiss-Prot:Q5NHN2,Genbank:YP_169460.1,GeneID:3192504;gbkey=CDS;product=glycogen synthase;protein_id=YP_169460.1;transl_table=11
NC_006570.2	RefSeq	gene	429161	431434	.	+	.	ID=gene425;Name=malP;Dbxref=GeneID:3191867;gbkey=Gene;gene=malP;locus_tag=FTT_0417
NC_006570.2	RefSeq	CDS	429161	431434	.	+	0	ID=cds377;Name=YP_169461.1;Parent=gene425;Note=Similar to Q8DN49 Maltodextrin phosphorylase from Streptococcus pneumoniae %28752 aa%29. FASTA: opt: 2938 Z-score: 3443.0 E%28%29: 6.9e-184 Smith-Waterman score: 2938%3B 59.569 identity in 742 aa overlap;Dbxref=GOA:Q5NHN1,InterPro:IPR011833,UniProtKB%2FTrEMBL:Q5NHN1,Genbank:YP_169461.1,GeneID:3191867;gbkey=CDS;product=maltodextrin phosphorylase;protein_id=YP_169461.1;transl_table=11
NC_006570.2	RefSeq	gene	431478	432941	.	+	.	ID=gene426;Name=malA;Dbxref=GeneID:3192205;gbkey=Gene;gene=malA;locus_tag=FTT_0418
NC_006570.2	RefSeq	CDS	431478	432941	.	+	0	ID=cds378;Name=YP_169462.1;Parent=gene426;Note=amylomaltase%3B acts to release glucose from maltodextrins;Dbxref=GOA:Q5NHN0,InterPro:IPR013781,UniProtKB%2FTrEMBL:Q5NHN0,Genbank:YP_169462.1,GeneID:3192205;gbkey=CDS;product=4-alpha-glucanotransferase;protein_id=YP_169462.1;transl_table=11
NC_006570.2	RefSeq	gene	433015	433923	.	+	.	ID=gene427;Name=glyQ;Dbxref=GeneID:3191773;gbkey=Gene;gene=glyQ;locus_tag=FTT_0419
NC_006570.2	RefSeq	CDS	433015	433923	.	+	0	ID=cds379;Name=YP_169463.1;Parent=gene427;Note=glycine--tRNA ligase alpha chain%3B GlyRS%3B class II aminoacyl tRNA synthetase%3B tetramer of alpha%282%29beta%282%29%3B catalyzes a two-step reaction%3B first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP%3B second by transfer of the aminoacyl-adenylate to its tRNA;Dbxref=GOA:Q5NHM9,InterPro:IPR006194,UniProtKB%2FTrEMBL:Q5NHM9,Genbank:YP_169463.1,GeneID:3191773;gbkey=CDS;product=glycyl-tRNA synthetase subunit alpha;protein_id=YP_169463.1;transl_table=11
NC_006570.2	RefSeq	gene	434134	435573	.	+	.	ID=gene428;Name=murE;Dbxref=GeneID:3191957;gbkey=Gene;gene=murE;locus_tag=FTT_0420
NC_006570.2	RefSeq	CDS	434134	435573	.	+	0	ID=cds380;Name=YP_169464.1;Parent=gene428;Note=Similar to MURE_NEIMB %28Q9K0Y9%29 UDP-N-acetylmuramoylalanyl-D-glutamate--2%2C 6-diaminopimelate ligase from Neisseria meningitidis %28492 aa%29. FASTA: opt: 1037 Z-score: 1223.7%2C E%28%29: 2.9e-60 Smith-Waterman score: 1037%3B 40.795 identity in 478 aa overlap;Dbxref=GOA:Q5NHM8,InterPro:IPR013221,UniProtKB%2FTrEMBL:Q5NHM8,Genbank:YP_169464.1,GeneID:3191957;gbkey=CDS;product=UDP-N-acetylmuramoylalanyl-D-glutamate--2%2C6-diaminopimelate ligase;protein_id=YP_169464.1;transl_table=11
NC_006570.2	RefSeq	gene	435655	436010	.	+	.	ID=gene429;Name=FTT_0421;Dbxref=GeneID:3191426;gbkey=Gene;locus_tag=FTT_0421;pseudo=true
NC_006570.2	RefSeq	gene	436365	437723	.	+	.	ID=gene430;Name=murF;Dbxref=GeneID:3191072;gbkey=Gene;gene=murF;locus_tag=FTT_0422
NC_006570.2	RefSeq	CDS	436365	437723	.	+	0	ID=cds381;Name=YP_169465.1;Parent=gene430;Note=Similar to Q87SG8 UDP-N-acetylmuramoylalanyl-D-glutamyl-2%2C6-diaminopimelate -D-alanyl-D-alanyl ligase from Vibrio parahaemolyticus %28454 aa%29. FASTA: opt: 870 Z-score: 1005.8 E%28%29: 3.9e-48 Smith-Waterman score: 870%3B 35.011 identity in 457 aa overlap;Dbxref=GOA:Q5NHM7,InterPro:IPR013221,UniProtKB%2FTrEMBL:Q5NHM7,Genbank:YP_169465.1,GeneID:3191072;gbkey=CDS;product=UDP-N--acetylmuramoylalanyl-D-glutamyl-2%2C6- diaminopimelate-D-alanyl-D-alanyl ligase;protein_id=YP_169465.1;transl_table=11
NC_006570.2	RefSeq	gene	437732	437911	.	+	.	ID=gene431;Name=FTT_0423;Dbxref=GeneID:3191424;gbkey=Gene;locus_tag=FTT_0423
NC_006570.2	RefSeq	CDS	437732	437911	.	+	0	ID=cds382;Name=YP_169466.1;Parent=gene431;Note=ORF ftt0423;Dbxref=UniProtKB%2FTrEMBL:Q5NHM6,Genbank:YP_169466.1,GeneID:3191424;gbkey=CDS;product=hypothetical protein;protein_id=YP_169466.1;transl_table=11
NC_006570.2	RefSeq	gene	438042	438551	.	+	.	ID=gene432;Name=FTT_0424;Dbxref=GeneID:3191425;gbkey=Gene;locus_tag=FTT_0424
NC_006570.2	RefSeq	CDS	438042	438551	.	+	0	ID=cds383;Name=YP_169467.1;Parent=gene432;Note=ORF ftt0424;Dbxref=UniProtKB%2FTrEMBL:Q5NHM5,Genbank:YP_169467.1,GeneID:3191425;gbkey=CDS;product=hypothetical protein;protein_id=YP_169467.1;transl_table=11
NC_006570.2	RefSeq	gene	438607	439701	.	-	.	ID=gene433;Name=asd;Dbxref=GeneID:3190952;gbkey=Gene;gene=asd;locus_tag=FTT_0425c
NC_006570.2	RefSeq	CDS	438607	439701	.	-	0	ID=cds384;Name=YP_169468.1;Parent=gene433;Note=catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde;Dbxref=GOA:Q8G8T7,HSSP:1NWC,InterPro:IPR016040,UniProtKB%2FTrEMBL:Q8G8T7,Genbank:YP_169468.1,GeneID:3190952;gbkey=CDS;product=aspartate-semialdehyde dehydrogenase;protein_id=YP_169468.1;transl_table=11
NC_006570.2	RefSeq	gene	439764	442212	.	+	.	ID=gene434;Name=thrA;Dbxref=GeneID:3190757;gbkey=Gene;gene=thrA;locus_tag=FTT_0426;pseudo=true
NC_006570.2	RefSeq	gene	442218	442995	.	+	.	ID=gene435;Name=thrB;Dbxref=GeneID:3190756;gbkey=Gene;gene=thrB;locus_tag=FTT_0427;pseudo=true
NC_006570.2	RefSeq	gene	443011	444297	.	+	.	ID=gene436;Name=thrC1;Dbxref=GeneID:3190776;gbkey=Gene;gene=thrC1;locus_tag=FTT_0428
NC_006570.2	RefSeq	CDS	443011	444297	.	+	0	ID=cds385;Name=YP_169469.1;Parent=gene436;Note=catalyzes the formation of L-threonine from O-phospho-L-homoserine;Dbxref=GOA:Q5NHM3,InterPro:IPR004450,UniProtKB%2FTrEMBL:Q5NHM3,Genbank:YP_169469.1,GeneID:3190776;gbkey=CDS;product=threonine synthase;protein_id=YP_169469.1;transl_table=11
NC_006570.2	RefSeq	gene	444398	444628	.	-	.	ID=gene437;Name=ebgA;Dbxref=GeneID:3191557;gbkey=Gene;gene=ebgA;locus_tag=FTT_0429c;pseudo=true
NC_006570.2	RefSeq	gene	444938	445372	.	+	.	ID=gene438;Name=speH;Dbxref=GeneID:3190726;gbkey=Gene;gene=speH;locus_tag=FTT_0430
NC_006570.2	RefSeq	CDS	444938	445372	.	+	0	ID=cds386;Name=YP_169470.1;Parent=gene438;Note=Similar to SPEH_METJA %28Q57763%29 S-adenosylmethionine decarboxylase proenzyme from Methanococcus jannaschii %28124 aa%29. FASTA: opt: 355 Z-score: 487.2%2C E%28%29: 3e-19 Smith-Waterman score: 355%3B 44.737 identity in 114 aa overlap;Dbxref=GOA:Q5NHM2,InterPro:IPR017716,UniProtKB%2FTrEMBL:Q5NHM2,Genbank:YP_169470.1,GeneID:3190726;gbkey=CDS;product=S-adenosylmethionine decarboxylase;protein_id=YP_169470.1;transl_table=11
NC_006570.2	RefSeq	gene	445372	446241	.	+	.	ID=gene439;Name=speE;Dbxref=GeneID:3190722;gbkey=Gene;gene=speE;locus_tag=FTT_0431
NC_006570.2	RefSeq	CDS	445372	446241	.	+	0	ID=cds387;Name=YP_169471.1;Parent=gene439;Note=catalyzes the formation of spermidine from putrescine and S-adenosylmethioninamine;Dbxref=GOA:Q5NHM1,InterPro:IPR001045,UniProtKB%2FTrEMBL:Q5NHM1,Genbank:YP_169471.1,GeneID:3190722;gbkey=CDS;product=spermidine synthase;protein_id=YP_169471.1;transl_table=11
NC_006570.2	RefSeq	gene	446267	447676	.	+	.	ID=gene440;Name=speA;Dbxref=GeneID:3190717;gbkey=Gene;gene=speA;locus_tag=FTT_0432
NC_006570.2	RefSeq	CDS	446267	447676	.	+	0	ID=cds388;Name=YP_169472.1;Parent=gene440;Note=Similar to Q8A2B1  arginine decarboxylase from Bacteroides thetaiotamicron %28630 aa%29. FASTA: opt: 571 Z-score: 678.2 E%28%29: 6.9e-30 Smith-Waterman score: 689%3B 28.755 identity in 546 aa overlap;Dbxref=GOA:Q5NHM0,InterPro:IPR002985,UniProtKB%2FTrEMBL:Q5NHM0,Genbank:YP_169472.1,GeneID:3190717;gbkey=CDS;product=arginine decarboxylase;protein_id=YP_169472.1;transl_table=11
NC_006570.2	RefSeq	gene	447726	447914	.	+	.	ID=gene441;Name=FTT_0433;Dbxref=GeneID:3191423;gbkey=Gene;locus_tag=FTT_0433
NC_006570.2	RefSeq	CDS	447726	447914	.	+	0	ID=cds389;Name=YP_169473.1;Parent=gene441;Note=ORF ftt0433;Dbxref=UniProtKB%2FTrEMBL:Q5NHL9,Genbank:YP_169473.1,GeneID:3191423;gbkey=CDS;product=hypothetical protein;protein_id=YP_169473.1;transl_table=11
NC_006570.2	RefSeq	gene	447895	448881	.	+	.	ID=gene442;Name=FTT_0434;Dbxref=GeneID:3191422;gbkey=Gene;locus_tag=FTT_0434
NC_006570.2	RefSeq	CDS	447895	448881	.	+	0	ID=cds390;Name=YP_169474.1;Parent=gene442;Note=Similar to Q8KCB6 Hypothetical protein CT1508 from Chlorobium tepidum %28347 aa%29. FASTA: opt: 742 Z-score: 939.4 E%28%29: 2e-44 Smith-Waterman score: 837%3B 38.484 identity in 343 aa overlap PAD_porph is a possible virulence factor for P. gingivalis: PMID: 10377098 ORF ftt0434;Dbxref=InterPro:IPR007466,UniProtKB%2FTrEMBL:Q5NHL8,Genbank:YP_169474.1,GeneID:3191422;gbkey=CDS;product=hypothetical protein;protein_id=YP_169474.1;transl_table=11
NC_006570.2	RefSeq	gene	448883	449743	.	+	.	ID=gene443;Name=FTT_0435;Dbxref=GeneID:3191421;gbkey=Gene;locus_tag=FTT_0435
NC_006570.2	RefSeq	CDS	448883	449743	.	+	0	ID=cds391;Name=YP_169475.1;Parent=gene443;Note=Similar to Q87NU4  carbon-nitrogen hydrolase from Vibrio parahaemolyticus %28288 aa%29. FASTA: opt: 1139 Z-score: 1419.0 E%28%29: 3.8e-71 Smith-Waterman score: 1139%3B 57.971 identity in 276 aa overlap. Possible candidate for citrulline ureidase ORF ftt0435;Dbxref=GOA:Q5NHL7,InterPro:IPR017755,UniProtKB%2FTrEMBL:Q5NHL7,Genbank:YP_169475.1,GeneID:3191421;gbkey=CDS;product=carbon-nitrogen hydrolase family protein;protein_id=YP_169475.1;transl_table=11
NC_006570.2	RefSeq	gene	449760	450476	.	-	.	ID=gene444;Name=lpxH;Dbxref=GeneID:3191794;gbkey=Gene;gene=lpxH;locus_tag=FTT_0436c
NC_006570.2	RefSeq	CDS	449760	450476	.	-	0	ID=cds392;Name=YP_169476.1;Parent=gene444;Note=catalyzes the formation of 2%2C3%3Ddiacylglucosamine 1-phosphate from UDP-2%2C3%3Ddiacylglucosamine;Dbxref=GOA:Q5NHL6,InterPro:IPR010138,UniProtKB%2FTrEMBL:Q5NHL6,Genbank:YP_169476.1,GeneID:3191794;gbkey=CDS;product=UDP-2%2C3-diacylglucosamine hydrolase;protein_id=YP_169476.1;transl_table=11
NC_006570.2	RefSeq	gene	450466	451092	.	-	.	ID=gene445;Name=pyrE;Dbxref=GeneID:3191653;gbkey=Gene;gene=pyrE;locus_tag=FTT_0437c
NC_006570.2	RefSeq	CDS	450466	451092	.	-	0	ID=cds393;Name=YP_169477.1;Parent=gene445;Note=involved in fifth step of pyrimidine biosynthesis%3B converts orotidine 5%27-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate;Dbxref=GOA:Q5NHL5,InterPro:IPR004467,UniProtKB%2FTrEMBL:Q5NHL5,Genbank:YP_169477.1,GeneID:3191653;gbkey=CDS;product=orotate phosphoribosyltransferase;protein_id=YP_169477.1;transl_table=11
NC_006570.2	RefSeq	gene	451252	452622	.	+	.	ID=gene446;Name=mpl;Dbxref=GeneID:3191609;gbkey=Gene;gene=mpl;locus_tag=FTT_0438
NC_006570.2	RefSeq	CDS	451252	452622	.	+	0	ID=cds394;Name=YP_169478.1;Parent=gene446;Note=Similar to MPL_ECOLI %28P37773%29 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso- diamino pimelate ligase %28murein peptide ligase%29 from E coli %28457 aa%29. FASTA: opt: 1392%2C Z-score: 1656.5%2C E%28%29: 2.3e-84%2CSmith-Waterman score: 1392%3B 47.912 identity in 455 aa overlap;Dbxref=GOA:Q5NHL4,InterPro:IPR016040,UniProtKB%2FTrEMBL:Q5NHL4,Genbank:YP_169478.1,GeneID:3191609;gbkey=CDS;product=UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase;protein_id=YP_169478.1;transl_table=11
NC_006570.2	RefSeq	gene	452619	453275	.	+	.	ID=gene447;Name=yjfH;Dbxref=GeneID:3192391;gbkey=Gene;gene=yjfH;locus_tag=FTT_0439
NC_006570.2	RefSeq	CDS	452619	453275	.	+	0	ID=cds395;Name=YP_169479.1;Parent=gene447;Note=Similar to YJFH_ECOLI %28P39290%29 hypothetical tRNA%2FrRNA methyltransferase yjfH from E. coli %28243 aa%29. FASTA: opt: 556%2C Z-score: 695.5%2C E%28%29: 7.5e-31 Smith-Waterman score: 556%3B 43.128 identity in 211 aa overlap. This CDS is disrupted by the insertion of an ISFtu1 element close to the C-terminal. It is not clear whether this insertion affects the function of the protein;Dbxref=GOA:Q5NHL3,InterPro:IPR013123,UniProtKB%2FTrEMBL:Q5NHL3,Genbank:YP_169479.1,GeneID:3192391;gbkey=CDS;product=tRNA%2FrRNA methyltransferase;protein_id=YP_169479.1;transl_table=11
NC_006570.2	RefSeq	repeat_region	453250	453261	.	-	.	ID=id84;Note=ISFtu1 12bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	gene	453349	454133	.	-	.	ID=gene448;Name=isftu1;Dbxref=GeneID:3191789;gbkey=Gene;gene=isftu1;locus_tag=FTT_0440c
NC_006570.2	RefSeq	CDS	453807	454133	.	-	0	ID=cds396;Name=YP_169480.1;Parent=gene448;Note=ISFtu1. Transposase%2C member of the IS630 Tc-1 mariner family. Identical to Q93EJ6  transposase from Francisella tularensis %28118 aa%29 from aa 144-261. Identical to Q93EJ7  transposase from Francisella tularensis %28126 aa%29 from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF%27s. ORF1 %28identical to Q93EJ7%29 contains a programmed ribosomal frameshifting motif%2C 5%27-AAAAAAAG-3%27 at aa position 109 which permits frameshifting to ORF2 %28identical to Q93EJ6%29 to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family%2C and also mariner elements%2C show that this transposase shares strongly conserved residues%2C including a fully conserved dipeptide%2CAsp-Glu %28DE%29%2C and a block consisting of a fully conserved Asp and highly conserved Glu%2C separated by 34 or 35 residues %28D35E%29. The conserved dipeptide is only present if ribosomal frameshifting occurs.;Dbxref=UniProtKB%2FTrEMBL:Q5NIH2,Genbank:YP_169480.1,GeneID:3191789;gbkey=CDS;product=transposase;protein_id=YP_169480.1;transl_table=11
NC_006570.2	RefSeq	CDS	453349	453807	.	-	0	ID=cds396;Name=YP_169480.1;Parent=gene448;Note=ISFtu1. Transposase%2C member of the IS630 Tc-1 mariner family. Identical to Q93EJ6  transposase from Francisella tularensis %28118 aa%29 from aa 144-261. Identical to Q93EJ7  transposase from Francisella tularensis %28126 aa%29 from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF%27s. ORF1 %28identical to Q93EJ7%29 contains a programmed ribosomal frameshifting motif%2C 5%27-AAAAAAAG-3%27 at aa position 109 which permits frameshifting to ORF2 %28identical to Q93EJ6%29 to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family%2C and also mariner elements%2C show that this transposase shares strongly conserved residues%2C including a fully conserved dipeptide%2CAsp-Glu %28DE%29%2C and a block consisting of a fully conserved Asp and highly conserved Glu%2C separated by 34 or 35 residues %28D35E%29. The conserved dipeptide is only present if ribosomal frameshifting occurs.;Dbxref=UniProtKB%2FTrEMBL:Q5NIH2,Genbank:YP_169480.1,GeneID:3191789;gbkey=CDS;product=transposase;protein_id=YP_169480.1;transl_table=11
NC_006570.2	RefSeq	repeat_region	454154	454169	.	-	.	ID=id85;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	454170	454185	.	-	.	ID=id86;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	454186	454197	.	-	.	ID=id87;Note=ISFtu1 12bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	gene	454334	454974	.	-	.	ID=gene449;Name=FTT_0441c;Dbxref=GeneID:3191420;gbkey=Gene;locus_tag=FTT_0441c;pseudo=true
NC_006570.2	RefSeq	gene	455004	456197	.	-	.	ID=gene450;Name=FTT_0442c;Dbxref=GeneID:3191419;gbkey=Gene;locus_tag=FTT_0442c
NC_006570.2	RefSeq	CDS	455004	456197	.	-	0	ID=cds397;Name=YP_169481.1;Parent=gene450;Note=Similar to Q8EU72 Bicyclomycin resistance protein from Oceanobacillus iheyensis %28412 aa%29. FASTA: opt: 614 Z-score: 668.2 E%28%29: 2.5e-29 Smith-Waterman score: 614%3B 30.179identity in 391 aa overlap ORF ftt0442c;Dbxref=GOA:Q5NHL1,InterPro:IPR011701,UniProtKB%2FTrEMBL:Q5NHL1,Genbank:YP_169481.1,GeneID:3191419;gbkey=CDS;product=major facilitator transporter;protein_id=YP_169481.1;transl_table=11
NC_006570.2	RefSeq	gene	456469	457512	.	+	.	ID=gene451;Name=FTT_0443;Dbxref=GeneID:3191417;gbkey=Gene;locus_tag=FTT_0443
NC_006570.2	RefSeq	CDS	456469	457512	.	+	0	ID=cds398;Name=YP_169482.1;Parent=gene451;Note=Similar to Q83C03 Conserved domain protein from Coxiella burnetii %28377 aa%29. FASTA: opt: 359 Z-score: 409.9 E%28%29: 6.1e-15 Smith-Waterman score: 380%3B 27.350 identity in 351 aa overlap ORF ftt0443;Dbxref=UniProtKB%2FTrEMBL:Q5NHL0,Genbank:YP_169482.1,GeneID:3191417;gbkey=CDS;product=hypothetical protein;protein_id=YP_169482.1;transl_table=11
NC_006570.2	RefSeq	gene	457583	458821	.	+	.	ID=gene452;Name=tet;Dbxref=GeneID:3190751;gbkey=Gene;gene=tet;locus_tag=FTT_0444
NC_006570.2	RefSeq	CDS	457583	458821	.	+	0	ID=cds399;Name=YP_169483.1;Parent=gene452;Note=Similar to Q83CB9 Multidrug transporter%2C  from Coxiella burnetii %28412 aa%29. FASTA: opt: 558 Z-score: 638.9 E%28%29: 1.1e-27 Smith-Waterman score: 558%3B 25.854identity in 410 aa overlap. Similar to tetA and tetC which are situated on a plasmid in E. coli;Dbxref=GOA:Q5NHK9,InterPro:IPR011701,UniProtKB%2FTrEMBL:Q5NHK9,Genbank:YP_169483.1,GeneID:3190751;gbkey=CDS;product=multidrug transporter %28tetracycline resistance protein%29;protein_id=YP_169483.1;transl_table=11
NC_006570.2	RefSeq	gene	458855	460695	.	+	.	ID=gene453;Name=uup;Dbxref=GeneID:3191919;gbkey=Gene;gene=uup;locus_tag=FTT_0445;pseudo=true
NC_006570.2	RefSeq	gene	460752	462194	.	+	.	ID=gene454;Name=FTT_0446;Dbxref=GeneID:3191413;gbkey=Gene;locus_tag=FTT_0446
NC_006570.2	RefSeq	CDS	460752	462194	.	+	0	ID=cds400;Name=YP_169484.1;Parent=gene454;Note=Similar to Q83RB7  transport protein from Shigella flexneri %28500 aa%29. FASTA: opt: 567 Z-score: 573.2 E%28%29: 4.9e-24 Smith-Waterman score: 578%3B 26.122 identity in 490 aa overlap ORF ftt0446;Dbxref=GOA:Q5NHK8,InterPro:IPR018456,UniProtKB%2FTrEMBL:Q5NHK8,Genbank:YP_169484.1,GeneID:3191413;gbkey=CDS;product=proton-dependent oligopeptide transport %28POT%29 family protein;protein_id=YP_169484.1;transl_table=11
NC_006570.2	RefSeq	gene	462338	463678	.	-	.	ID=gene455;Name=FTT_0447c;Dbxref=GeneID:3191414;gbkey=Gene;locus_tag=FTT_0447c
NC_006570.2	RefSeq	CDS	462338	463678	.	-	0	ID=cds401;Name=YP_169485.1;Parent=gene455;Note=Similar to Q83DW3 Hypothetical protein from Coxiella burnetii %28497 aa%29. FASTA: opt: 334 Z-score: 356.6 E%28%29: 5.7e-12 Smith-Waterman score: 336%3B 24.129 identity in 402 aa overlap ORF ftt0447c;Dbxref=UniProtKB%2FTrEMBL:Q5NHK7,Genbank:YP_169485.1,GeneID:3191414;gbkey=CDS;product=hypothetical protein;protein_id=YP_169485.1;transl_table=11
NC_006570.2	RefSeq	gene	463699	465345	.	-	.	ID=gene456;Name=glnS;Dbxref=GeneID:3190997;gbkey=Gene;gene=glnS;locus_tag=FTT_0448c
NC_006570.2	RefSeq	CDS	463699	465345	.	-	0	ID=cds402;Name=YP_169486.1;Parent=gene456;Note=catalyzes a two-step reaction%2C first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA;Dbxref=GOA:Q5NHK6,InterPro:IPR004514,UniProtKB%2FTrEMBL:Q5NHK6,Genbank:YP_169486.1,GeneID:3190997;gbkey=CDS;product=glutaminyl-tRNA synthetase;protein_id=YP_169486.1;transl_table=11
NC_006570.2	RefSeq	gene	465490	467082	.	+	.	ID=gene457;Name=pckA;Dbxref=GeneID:3191431;gbkey=Gene;gene=pckA;locus_tag=FTT_0449
NC_006570.2	RefSeq	CDS	465490	467082	.	+	0	ID=cds403;Name=YP_169487.1;Parent=gene457;Note=PEP carboxykinase%3B PEP carboxylase%3B PEPCK%3B catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP;Dbxref=GOA:Q5NHK5,InterPro:IPR013035,UniProtKB%2FTrEMBL:Q5NHK5,Genbank:YP_169487.1,GeneID:3191431;gbkey=CDS;product=phosphoenolpyruvate carboxykinase;protein_id=YP_169487.1;transl_table=11
NC_006570.2	RefSeq	gene	467157	468254	.	+	.	ID=gene458;Name=mraY;Dbxref=GeneID:3191161;gbkey=Gene;gene=mraY;locus_tag=FTT_0450
NC_006570.2	RefSeq	CDS	467157	468254	.	+	0	ID=cds404;Name=YP_169488.1;Parent=gene458;Note=First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan;Dbxref=GOA:Q5NHK4,InterPro:IPR018481,UniProtKB%2FSwiss-Prot:Q5NHK4,Genbank:YP_169488.1,GeneID:3191161;gbkey=CDS;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=YP_169488.1;transl_table=11
NC_006570.2	RefSeq	gene	468254	469504	.	+	.	ID=gene459;Name=murD;Dbxref=GeneID:3191954;gbkey=Gene;gene=murD;locus_tag=FTT_0451
NC_006570.2	RefSeq	CDS	468254	469504	.	+	0	ID=cds405;Name=YP_169489.1;Parent=gene459;Note=Similar to MURD_CHLCV %28Q821S1%29 UDP-N-acetylmuramoylalanine--D-glutamate ligase from Chlamydophila caviae %28419 aa%29 FASTA: opt: 516 Z-score: 615.2 E%28%29: 2.2e-26 Smith-Waterman score: 549%3B 28.000 identity in 425 aa overlap;Dbxref=GOA:Q5NHK3,InterPro:IPR013221,UniProtKB%2FSwiss-Prot:Q5NHK3,Genbank:YP_169489.1,GeneID:3191954;gbkey=CDS;product=UDP-N-acetylmuramoylalanine--D-glutamate ligase;protein_id=YP_169489.1;transl_table=11
NC_006570.2	RefSeq	gene	469514	470719	.	+	.	ID=gene460;Name=ftsW;Dbxref=GeneID:3190868;gbkey=Gene;gene=ftsW;locus_tag=FTT_0452
NC_006570.2	RefSeq	CDS	469514	470719	.	+	0	ID=cds406;Name=YP_169490.1;Parent=gene460;Note=Similar to Q9KPG6 Cell division protein FtsW from Vibrio cholerae %28398 aa%29. FASTA: opt: 1114 Z-score: 1237.3 E%28%29: 5e-61 Smith-Waterman score: 1114%3B 44.892 identity in 372 aa overlap;Dbxref=GOA:Q5NHK2,InterPro:IPR018365,UniProtKB%2FTrEMBL:Q5NHK2,Genbank:YP_169490.1,GeneID:3190868;gbkey=CDS;product=cell division protein FtsW;protein_id=YP_169490.1;transl_table=11
NC_006570.2	RefSeq	gene	470727	471533	.	-	.	ID=gene461;Name=FTT_0453c;Dbxref=GeneID:3191411;gbkey=Gene;locus_tag=FTT_0453c
NC_006570.2	RefSeq	CDS	470727	471533	.	-	0	ID=cds407;Name=YP_169491.1;Parent=gene461;Note=Similar to Q83DW2 Hypothetical protein from Coxiella burnetii %28273 aa%29. FASTA: opt: 554 Z-score: 648.8 E%28%29: 3e-28 Smith-Waterman score: 554%3B 37.407identity in 270 aa overlap ORF ftt0453c;Dbxref=InterPro:IPR006879,UniProtKB%2FTrEMBL:Q5NHK1,Genbank:YP_169491.1,GeneID:3191411;gbkey=CDS;product=hypothetical protein;protein_id=YP_169491.1;transl_table=11
NC_006570.2	RefSeq	gene	471632	472588	.	+	.	ID=gene462;Name=yfdH;Dbxref=GeneID:3192164;gbkey=Gene;gene=yfdH;locus_tag=FTT_0454
NC_006570.2	RefSeq	CDS	471632	472588	.	+	0	ID=cds408;Name=YP_169492.1;Parent=gene462;Note=Similar to Q83DW4 Glycosyl transferase%2C group 2 family protein from Coxiella burnetii %28324 aa%29. FASTA: opt: 896 Z-score: 1055.7 E%28%29: 6.5e-51 Smith-Waterman score: 896%3B 43.189identity in 301 aa overlap;Dbxref=GOA:Q5NHK0,InterPro:IPR001173,UniProtKB%2FTrEMBL:Q5NHK0,Genbank:YP_169492.1,GeneID:3192164;gbkey=CDS;product=glycosyl transferase family protein;protein_id=YP_169492.1;transl_table=11
NC_006570.2	RefSeq	gene	472980	474743	.	-	.	ID=gene463;Name=FTT_0455c;Dbxref=GeneID:3191408;gbkey=Gene;locus_tag=FTT_0455c
NC_006570.2	RefSeq	CDS	472980	474743	.	-	0	ID=cds409;Name=YP_169493.1;Parent=gene463;Note=Similar to Q8XQM9 Probable transmembrane protein from Ralstonia solanacearum %28551 aa%29. FASTA: opt: 683 Z-score: 749.4 E%28%29: 7.6e-34 Smith-Waterman score: 683%3B 29.174 identity in 545 aa overlap ORF ftt0455c;Dbxref=GOA:Q5NHJ9,InterPro:IPR003342,UniProtKB%2FTrEMBL:Q5NHJ9,Genbank:YP_169493.1,GeneID:3191408;gbkey=CDS;product=dolichyl-phosphate-mannose-protein mannosyltransferase family protein;protein_id=YP_169493.1;transl_table=11
NC_006570.2	RefSeq	gene	474835	475128	.	-	.	ID=gene464;Name=FTT_0456c;Dbxref=GeneID:3191407;gbkey=Gene;locus_tag=FTT_0456c
NC_006570.2	RefSeq	CDS	474835	475128	.	-	0	ID=cds410;Name=YP_169494.1;Parent=gene464;Note=Similar to Y941_COXBU Hypothetical UPF0269 protein CBU0941 from Coxiella burnetii %2890 aa%29. FASTA: opt: 346 Z-score: 470.4 E%28%29: 2.6e-18 Smith-Waterman score: 346%3B 55.422 identity in 83 aa overlap ORF ftt0456c;Dbxref=GOA:Q5NHJ8,InterPro:IPR007457,UniProtKB%2FSwiss-Prot:Q5NHJ8,Genbank:YP_169494.1,GeneID:3191407;gbkey=CDS;product=hypothetical protein;protein_id=YP_169494.1;transl_table=11
NC_006570.2	RefSeq	gene	475119	475433	.	-	.	ID=gene465;Name=yccK;Dbxref=GeneID:3192160;gbkey=Gene;gene=yccK;locus_tag=FTT_0457c
NC_006570.2	RefSeq	CDS	475119	475433	.	-	0	ID=cds411;Name=YP_169495.1;Parent=gene465;Note=Similar to Q9CNM6 Hypothetical protein PM0401 from Pasteurella multocida %28109 aa%29. initn: 382 init1: 382 opt: 382 Z-score: 511.4 bits: 99.7 E%28%29: 1.4e-20 Smith-Waterman score: 382%3B 58.586identity %2858.58639ngapped%29 in 99 aa overlap;Dbxref=GOA:Q5NHJ7,InterPro:IPR007453,UniProtKB%2FTrEMBL:Q5NHJ7,Genbank:YP_169495.1,GeneID:3192160;gbkey=CDS;product=anaerobic sulfite reductase subunit;protein_id=YP_169495.1;transl_table=11
NC_006570.2	RefSeq	gene	475519	476151	.	+	.	ID=gene466;Name=sspA;Dbxref=GeneID:3190731;gbkey=Gene;gene=sspA;locus_tag=FTT_0458
NC_006570.2	RefSeq	CDS	475519	476151	.	+	0	ID=cds412;Name=YP_169496.1;Parent=gene466;Note=Similar to SSPA_HAESO %28P31784%29 Stringent starvation protein A homolog from Haemophilus somnus %28212 aa%29. FASTA: opt: 377 Z-score: 473.8 E%28%29: 1.7e-18 Smith-Waterman score: 377%3B 35.106 identity in 188 aa overlap;Dbxref=GOA:Q5NHJ6,InterPro:IPR017933,UniProtKB%2FTrEMBL:Q5NHJ6,Genbank:YP_169496.1,GeneID:3190731;gbkey=CDS;product=stringent starvation protein A;protein_id=YP_169496.1;transl_table=11
NC_006570.2	RefSeq	gene	476163	477182	.	+	.	ID=gene467;Name=sohB;Dbxref=GeneID:3190718;gbkey=Gene;gene=sohB;locus_tag=FTT_0459
NC_006570.2	RefSeq	CDS	476163	477182	.	+	0	ID=cds413;Name=YP_169497.1;Parent=gene467;Note=SohB%3B periplasmic protein%3B member of the peptidase S49 family;Dbxref=GOA:Q5NHJ5,InterPro:IPR013703,UniProtKB%2FTrEMBL:Q5NHJ5,Genbank:YP_169497.1,GeneID:3190718;gbkey=CDS;product=periplasmic protease;protein_id=YP_169497.1;transl_table=11
NC_006570.2	RefSeq	gene	477190	478101	.	+	.	ID=gene468;Name=holB;Dbxref=GeneID:3192338;gbkey=Gene;gene=holB;locus_tag=FTT_0460
NC_006570.2	RefSeq	CDS	477190	478101	.	+	0	ID=cds414;Name=YP_169498.1;Parent=gene468;Note=Similar to Q8D3A6 HolB protein from Wigglesworthia glossinidia brevipalpis %28329 aa%29. FASTA: opt: 315 Z-score: 378.8 E%28%29: 3.3e-13 Smith-Waterman score: 315%3B 27.304 identity in 293 aa overlap;Dbxref=GOA:Q5NHJ4,InterPro:IPR015199,UniProtKB%2FTrEMBL:Q5NHJ4,Genbank:YP_169498.1,GeneID:3192338;gbkey=CDS;product=DNA polymerase III%2C delta prime subunit;protein_id=YP_169498.1;transl_table=11
NC_006570.2	RefSeq	gene	478112	478390	.	+	.	ID=gene469;Name=yhbY;Dbxref=GeneID:3191267;gbkey=Gene;gene=yhbY;locus_tag=FTT_0461
NC_006570.2	RefSeq	CDS	478112	478390	.	+	0	ID=cds415;Name=YP_169499.1;Parent=gene469;Note=Similar to Q87LZ3  RNA-binding protein containing KH domain from Vibrio parahaemolyticus %2898 aa%29. FASTA: opt: 289 Z-score: 405.9 E%28%29: 1e-14 Smith-Waterman score: 289%3B 52.222 identity in 90 aa overlap;Dbxref=GOA:Q5NHJ3,InterPro:IPR017924,UniProtKB%2FTrEMBL:Q5NHJ3,Genbank:YP_169499.1,GeneID:3191267;gbkey=CDS;product=RNA-binding protein;protein_id=YP_169499.1;transl_table=11
NC_006570.2	RefSeq	gene	478398	479372	.	+	.	ID=gene470;Name=hemB;Dbxref=GeneID:3192415;gbkey=Gene;gene=hemB;locus_tag=FTT_0462
NC_006570.2	RefSeq	CDS	478398	479372	.	+	0	ID=cds416;Name=YP_169500.1;Parent=gene470;Note=catalyzes the formation of porphobilinogen from 5-aminolevulinate;Dbxref=GOA:Q5NHJ2,InterPro:IPR013785,UniProtKB%2FTrEMBL:Q5NHJ2,Genbank:YP_169500.1,GeneID:3192415;gbkey=CDS;product=delta-aminolevulinic acid dehydratase;protein_id=YP_169500.1;transl_table=11
NC_006570.2	RefSeq	gene	479376	479843	.	+	.	ID=gene471;Name=yibK;Dbxref=GeneID:3191278;gbkey=Gene;gene=yibK;locus_tag=FTT_0463
NC_006570.2	RefSeq	CDS	479376	479843	.	+	0	ID=cds417;Name=YP_169501.1;Parent=gene471;Note=Similar to Q8E8X2 RNA methyltransferase%2C TrmH family%2C group 2 from Shewanella oneidensis %28154 aa%29. FASTA: opt: 569 Z-score: 759.8 E%28%29: 2e-34 Smith-Waterman score: 569%3B 57.616 identity in 151 aa overlap;Dbxref=GOA:Q5NHJ1,InterPro:IPR016914,UniProtKB%2FTrEMBL:Q5NHJ1,Genbank:YP_169501.1,GeneID:3191278;gbkey=CDS;product=tRNA%2FrRNA methyltransferase;protein_id=YP_169501.1;transl_table=11
NC_006570.2	RefSeq	gene	479961	481025	.	+	.	ID=gene472;Name=ansB;Dbxref=GeneID:3192351;gbkey=Gene;gene=ansB;locus_tag=FTT_0464
NC_006570.2	RefSeq	CDS	479961	481025	.	+	0	ID=cds418;Name=YP_169502.1;Parent=gene472;Note=Similar to ASG2_HAEIN %28P43843%29 Probable L-asparaginase periplasmic %5BPrecursor%5D from Haemophilus influenzae %28349 aa%29. FASTA: opt: 897 Z-score: 1034.7 E%28%29: 9.6e-50 Smith-Waterman score: 897%3B 43.966 identity in 348 aa overlap. No signal peptide predicted;Dbxref=GOA:Q5NHJ0,InterPro:IPR006034,UniProtKB%2FTrEMBL:Q5NHJ0,Genbank:YP_169502.1,GeneID:3192351;gbkey=CDS;product=periplasmic L-asparaginase II;protein_id=YP_169502.1;transl_table=11
NC_006570.2	RefSeq	gene	481749	481937	.	+	.	ID=gene473;Name=FTT_0465;Dbxref=GeneID:3191406;gbkey=Gene;locus_tag=FTT_0465
NC_006570.2	RefSeq	CDS	481749	481937	.	+	0	ID=cds419;Name=YP_169503.1;Parent=gene473;Note=ORF ftt0465;Dbxref=UniProtKB%2FTrEMBL:Q5NHI9,Genbank:YP_169503.1,GeneID:3191406;gbkey=CDS;product=hypothetical protein;protein_id=YP_169503.1;transl_table=11
NC_006570.2	RefSeq	gene	481989	483734	.	-	.	ID=gene474;Name=argS;Dbxref=GeneID:3190944;gbkey=Gene;gene=argS;locus_tag=FTT_0466c
NC_006570.2	RefSeq	CDS	481989	483734	.	-	0	ID=cds420;Name=YP_169504.1;Parent=gene474;Note=catalyzes a two-step reaction%2C first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B class-I aminoacyl-tRNA synthetase;Dbxref=GOA:Q5NHI8,InterPro:IPR015945,UniProtKB%2FSwiss-Prot:Q5NHI8,Genbank:YP_169504.1,GeneID:3190944;gbkey=CDS;product=arginyl-tRNA synthetase;protein_id=YP_169504.1;transl_table=11
NC_006570.2	RefSeq	gene	483860	486466	.	+	.	ID=gene475;Name=ostA1;Dbxref=GeneID:3191215;gbkey=Gene;gene=ostA1;locus_tag=FTT_0467
NC_006570.2	RefSeq	CDS	483860	486466	.	+	0	ID=cds421;Name=YP_169505.1;Parent=gene475;Note=Similar to OSTA_XYLFT %28Q87AI9%29 Organic solvent tolerance protein from Xylella fastidiosa %28792 aa%29. FASTA: opt: 700 Z-score: 808.7 E%28%29: 3.7e-37 Smith-Waterman score: 775%3B 26.572 identity in 636 aa overlap;Dbxref=GOA:Q5NHI7,InterPro:IPR007543,UniProtKB%2FSwiss-Prot:Q5NHI7,Genbank:YP_169505.1,GeneID:3191215;gbkey=CDS;product=organic solvent tolerance protein;protein_id=YP_169505.1;transl_table=11
NC_006570.2	RefSeq	gene	486448	487869	.	+	.	ID=gene476;Name=surA;Dbxref=GeneID:3190745;gbkey=Gene;gene=surA;locus_tag=FTT_0468
NC_006570.2	RefSeq	CDS	486448	487869	.	+	0	ID=cds422;Name=YP_169506.1;Parent=gene476;Note=Similar to Q8ZIK4 Survival protein SurA %28Peptidyl-prolyl cis-trans isomerase%29 from Yersinia pestis %28434 aa%29. FASTA: opt: 532 Z-score: 586.9 E%28%29: 8.4e-25 Smith-Waterman score: 532%3B 25.176 identity in 425 aa overlap;Dbxref=GOA:Q5NHI6,InterPro:IPR015391,UniProtKB%2FTrEMBL:Q5NHI6,Genbank:YP_169506.1,GeneID:3190745;gbkey=CDS;product=peptidyl-prolyl cis-trans isomerase;protein_id=YP_169506.1;transl_table=11
NC_006570.2	RefSeq	gene	487871	488659	.	+	.	ID=gene477;Name=ksgA;Dbxref=GeneID:3190742;gbkey=Gene;gene=ksgA;locus_tag=FTT_0469
NC_006570.2	RefSeq	CDS	487871	488659	.	+	0	ID=cds423;Name=YP_169507.1;Parent=gene477;Note=catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine %28S-AdoMet%29 to two adjacent adenosine bases A1518 and A1519 in 16S rRNA%3B mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin;Dbxref=GOA:Q5NHI5,InterPro:IPR011530,UniProtKB%2FSwiss-Prot:Q5NHI5,Genbank:YP_169507.1,GeneID:3190742;gbkey=CDS;product=dimethyladenosine transferase;protein_id=YP_169507.1;transl_table=11
NC_006570.2	RefSeq	gene	488671	489498	.	+	.	ID=gene478;Name=apaH;Dbxref=GeneID:3192350;gbkey=Gene;gene=apaH;locus_tag=FTT_0470
NC_006570.2	RefSeq	CDS	488671	489498	.	+	0	ID=cds424;Name=YP_169508.1;Parent=gene478;Note=hydrolyzes P%281%29%2CP%284%29-bis%285%27-adenosyl%29 tetraphosphate to form 2 ADP;Dbxref=GOA:Q5NHI4,InterPro:IPR004843,UniProtKB%2FTrEMBL:Q5NHI4,Genbank:YP_169508.1,GeneID:3192350;gbkey=CDS;product=diadenosine tetraphosphatase;protein_id=YP_169508.1;transl_table=11
NC_006570.2	RefSeq	gene	489502	489939	.	+	.	ID=gene479;Name=aroD;Dbxref=GeneID:3192548;gbkey=Gene;gene=aroD;locus_tag=FTT_0471
NC_006570.2	RefSeq	CDS	489502	489939	.	+	0	ID=cds425;Name=YP_169509.1;Parent=gene479;Note=catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis;Dbxref=GOA:Q5NHI3,InterPro:IPR018509,UniProtKB%2FSwiss-Prot:Q5NHI3,Genbank:YP_169509.1,GeneID:3192548;gbkey=CDS;product=3-dehydroquinate dehydratase;protein_id=YP_169509.1;transl_table=11
NC_006570.2	RefSeq	gene	489944	490417	.	+	.	ID=gene480;Name=accB;Dbxref=GeneID:3191467;gbkey=Gene;gene=accB;locus_tag=FTT_0472
NC_006570.2	RefSeq	CDS	489944	490417	.	+	0	ID=cds426;Name=YP_169510.1;Parent=gene480;Note=Similar to BCCP_PSEAE %28P37799%29 Biotin carboxyl carrier protein of acetyl-CoA carboxylase from Pseudomonas aeruginosa %28156 aa%29. FASTA: opt: 466 Z-score: 537.8 E%28%29: 4.6e-22 Smith-Waterman score: 466%3B 48.148 identity in 162 aa overlap;Dbxref=GOA:Q5NHI2,InterPro:IPR001249,UniProtKB%2FTrEMBL:Q5NHI2,Genbank:YP_169510.1,GeneID:3191467;gbkey=CDS;product=Acetyl-CoA carboxylase%2C biotin carboxyl carrier protein subunit;protein_id=YP_169510.1;transl_table=11
NC_006570.2	RefSeq	gene	490482	491837	.	+	.	ID=gene481;Name=accC;Dbxref=GeneID:3192529;gbkey=Gene;gene=accC;locus_tag=FTT_0473
NC_006570.2	RefSeq	CDS	490482	491837	.	+	0	ID=cds427;Name=YP_169511.1;Parent=gene481;Note=Similar to Q9KV62 Acetyl-CoA carboxylase%2C biotin carboxylase subunit from Vibrio cholerae %28447 aa%29. FASTA: opt: 2119 Z-score: 2505.5 E%28%29: 1.2e-131 Smith-Waterman score: 2119%3B 70.270 identity in 444 aa overlap;Dbxref=GOA:Q5NHI1,InterPro:IPR013817,UniProtKB%2FTrEMBL:Q5NHI1,Genbank:YP_169511.1,GeneID:3192529;gbkey=CDS;product=Acetyl-CoA carboxylase%2C biotin carboxylase subunit;protein_id=YP_169511.1;transl_table=11
NC_006570.2	RefSeq	gene	491931	492611	.	+	.	ID=gene482;Name=FTT_0474;Dbxref=GeneID:3191405;gbkey=Gene;locus_tag=FTT_0474
NC_006570.2	RefSeq	CDS	491931	492611	.	+	0	ID=cds428;Name=YP_169512.1;Parent=gene482;Note=ORF ftt0474;Dbxref=UniProtKB%2FTrEMBL:Q5NHI0,Genbank:YP_169512.1,GeneID:3191405;gbkey=CDS;product=hypothetical protein;protein_id=YP_169512.1;transl_table=11
NC_006570.2	RefSeq	gene	492637	493755	.	+	.	ID=gene483;Name=msc;Dbxref=GeneID:3191637;gbkey=Gene;gene=msc;locus_tag=FTT_0475
NC_006570.2	RefSeq	CDS	492637	493755	.	+	0	ID=cds429;Name=YP_169513.1;Parent=gene483;Note=Similar to Q87G16 %28Q87G16%29  membrane protein from Vibrio parahaemolyticus %28365 aa%29. FASTA: opt: 362 Z-score: 432.0 E%28%29: 3.6e-16 Smith-Waterman score: 412%3B 29.167 identity in 384 aa overlap;Dbxref=GOA:Q5NHH9,InterPro:IPR006685,UniProtKB%2FTrEMBL:Q5NHH9,Genbank:YP_169513.1,GeneID:3191637;gbkey=CDS;product=mechanosensitive ion channel MscS;protein_id=YP_169513.1;transl_table=11
NC_006570.2	RefSeq	gene	493760	494683	.	-	.	ID=gene484;Name=poxA;Dbxref=GeneID:3191874;gbkey=Gene;gene=poxA;locus_tag=FTT_0476c
NC_006570.2	RefSeq	CDS	493760	494683	.	-	0	ID=cds430;Name=YP_169514.1;Parent=gene484;Note=Similar to Q83AR3 %28Q83AR3%29 Lysyl-tRNA synthetase-related protein from Coxiella burnetii %28321 aa%29. FASTA: opt: 727 Z-score: 890.9 E%28%29: 9.9e-42 Smith-Waterman score: 727%3B 42.088 identity in 297 aa overlap;Dbxref=GOA:Q5NHH8,InterPro:IPR018150,UniProtKB%2FTrEMBL:Q5NHH8,Genbank:YP_169514.1,GeneID:3191874;gbkey=CDS;product=lysyl-tRNA synthetase;protein_id=YP_169514.1;transl_table=11
NC_006570.2	RefSeq	gene	494680	495462	.	-	.	ID=gene485;Name=birA;Dbxref=GeneID:3190970;gbkey=Gene;gene=birA;locus_tag=FTT_0477c
NC_006570.2	RefSeq	CDS	494680	495462	.	-	0	ID=cds431;Name=YP_169515.1;Parent=gene485;Note=Similar to Q83CV0 BirA bifunctional protein from Coxiella burnetii %28323 aa%29. FASTA: opt: 375 Z-score: 457.7 E%28%29: 1.3e-17 Smith-Waterman score: 375%3B 31.004 identity in 229 aa overlap;Dbxref=GOA:Q5NHH7,InterPro:IPR004408,UniProtKB%2FTrEMBL:Q5NHH7,Genbank:YP_169515.1,GeneID:3190970;gbkey=CDS;product=transcription repressor BirA;protein_id=YP_169515.1;transl_table=11
NC_006570.2	RefSeq	gene	495459	497201	.	-	.	ID=gene486;Name=recJ;Dbxref=GeneID:3191636;gbkey=Gene;gene=recJ;locus_tag=FTT_0478c
NC_006570.2	RefSeq	CDS	495459	497201	.	-	0	ID=cds432;Name=YP_169516.1;Parent=gene486;Note=Similar to RECJ_HAEIN %28P45112%29 single-stranded-DNA-specific exonuclease from Haemophilus influenzae %28575 aa%29. FASTA: opt: 869 Z-score: 996.6 E%28%29: 1.3e-47 Smith-Waterman score: 902%3B 32.028identity in 562 aa overlap;Dbxref=GOA:Q5NHH6,InterPro:IPR004610,UniProtKB%2FTrEMBL:Q5NHH6,Genbank:YP_169516.1,GeneID:3191636;gbkey=CDS;product=single-stranded-DNA-specific exonuclease;protein_id=YP_169516.1;transl_table=11
NC_006570.2	RefSeq	gene	497195	498301	.	-	.	ID=gene487;Name=perM;Dbxref=GeneID:3191330;gbkey=Gene;gene=perM;locus_tag=FTT_0479c
NC_006570.2	RefSeq	CDS	497195	498301	.	-	0	ID=cds433;Name=YP_169517.1;Parent=gene487;Note=Similar to Q9I4W6 Hypothetical protein PA1007 from Pseudomonas aeruginosa %28357 aa%29. FASTA: opt: 1016 Z-score: 1092.5 E%28%29: 5.8e-53 Smith-Waterman score: 1016%3B 40.698 identity in 344 aa overlap;Dbxref=InterPro:IPR002549,UniProtKB%2FTrEMBL:Q5NHH5,Genbank:YP_169517.1,GeneID:3191330;gbkey=CDS;product=PerM family protein;protein_id=YP_169517.1;transl_table=11
NC_006570.2	RefSeq	gene	498403	499812	.	-	.	ID=gene488;Name=xasA;Dbxref=GeneID:3192117;gbkey=Gene;gene=xasA;locus_tag=FTT_0480c
NC_006570.2	RefSeq	CDS	498403	499812	.	-	0	ID=cds434;Name=YP_169518.1;Parent=gene488;Note=Similar to Q8YBJ1 Glutamate:gamma-aminobutyrate antiporter from Brucella melitensis %28510 aa%29. FASTA: opt: 983 Z-score: 1079.5 E%28%29: 3.1e-52 Smith-Waterman score: 983%3B 34.698 identity in 464 aa overlap;Dbxref=GOA:Q5NHH4,InterPro:IPR004841,UniProtKB%2FTrEMBL:Q5NHH4,Genbank:YP_169518.1,GeneID:3192117;gbkey=CDS;product=glutamate:gamma-aminobutyric acid antiporter family protein;protein_id=YP_169518.1;transl_table=11
NC_006570.2	RefSeq	gene	499896	501077	.	+	.	ID=gene489;Name=potF;Dbxref=GeneID:3191596;gbkey=Gene;gene=potF;locus_tag=FTT_0481
NC_006570.2	RefSeq	CDS	499896	501077	.	+	0	ID=cds435;Name=YP_169519.1;Parent=gene489;Note=Similar to Q92RX4 Probable putrescine-binding periplasmic protein from Rhizobium meliloti %28364 aa%29. FASTA: opt: 847 Z-score: 993.2 E%28%29: 2e-47 Smith-Waterman score: 847%3B 35.714 identity in 350 aa overlap;Dbxref=GOA:Q5NHH3,InterPro:IPR006059,UniProtKB%2FTrEMBL:Q5NHH3,Genbank:YP_169519.1,GeneID:3191596;gbkey=CDS;product=putrescine-binding periplasmic protein;protein_id=YP_169519.1;transl_table=11
NC_006570.2	RefSeq	gene	501330	502145	.	-	.	ID=gene490;Name=FTT_0482c;Dbxref=GeneID:3191404;gbkey=Gene;locus_tag=FTT_0482c
NC_006570.2	RefSeq	CDS	501330	502145	.	-	0	ID=cds436;Name=YP_169520.1;Parent=gene490;Note=ORF ftt0482c;Dbxref=UniProtKB%2FTrEMBL:Q5NHH2,Genbank:YP_169520.1,GeneID:3191404;gbkey=CDS;product=lipoprotein;protein_id=YP_169520.1;transl_table=11
NC_006570.2	RefSeq	gene	502364	503251	.	-	.	ID=gene491;Name=FTT_0483c;Dbxref=GeneID:3191403;gbkey=Gene;locus_tag=FTT_0483c
NC_006570.2	RefSeq	CDS	502364	503251	.	-	0	ID=cds437;Name=YP_169521.1;Parent=gene491;Note=Similar to AAP95905 %28AAP95905%29 Hypothetical protein from Haemophilus ducreyi 35000HP %28342 aa%29. FASTA: opt: 686 Z-score: 815.5 E%28%29: 1.6e-37 Smith-Waterman score: 686%3B 40.678 identity in 295 aa overlap ORF ftt0483c;Dbxref=GOA:Q5NHH1,InterPro:IPR010914,UniProtKB%2FTrEMBL:Q5NHH1,Genbank:YP_169521.1,GeneID:3191403;gbkey=CDS;product=hypothetical protein;protein_id=YP_169521.1;transl_table=11
NC_006570.2	RefSeq	gene	503405	504124	.	+	.	ID=gene492;Name=FTT_0484;Dbxref=GeneID:3191402;gbkey=Gene;locus_tag=FTT_0484
NC_006570.2	RefSeq	CDS	503405	504124	.	+	0	ID=cds438;Name=YP_169522.1;Parent=gene492;Note=ORF ftt0484;Dbxref=UniProtKB%2FTrEMBL:Q5NHH0,Genbank:YP_169522.1,GeneID:3191402;gbkey=CDS;product=hypothetical protein;protein_id=YP_169522.1;transl_table=11
NC_006570.2	RefSeq	gene	504192	504854	.	+	.	ID=gene493;Name=FTT_0485;Dbxref=GeneID:3191401;gbkey=Gene;locus_tag=FTT_0485
NC_006570.2	RefSeq	CDS	504192	504854	.	+	0	ID=cds439;Name=YP_169523.1;Parent=gene493;Note=ORF ftt0485;Dbxref=UniProtKB%2FTrEMBL:Q5NHG9,Genbank:YP_169523.1,GeneID:3191401;gbkey=CDS;product=hypothetical protein;protein_id=YP_169523.1;transl_table=11
NC_006570.2	RefSeq	gene	504862	506664	.	+	.	ID=gene494;Name=mutL;Dbxref=GeneID:3192051;gbkey=Gene;gene=mutL;locus_tag=FTT_0486
NC_006570.2	RefSeq	CDS	504862	506664	.	+	0	ID=cds440;Name=YP_169524.1;Parent=gene494;Note=Similar to MUTL_RICPR %28Q9ZC88%29 DNA mismatch repair protein mutL from Rickettsia prowazekii %28595 aa%29. FASTA: opt: 1236 Z-score: 1435.6 E%28%29: 4.5e-72 Smith-Waterman score: 1236%3B 37.291 identity in 598 aa overlap;Dbxref=GOA:Q5NHG8,InterPro:IPR014790,UniProtKB%2FTrEMBL:Q5NHG8,Genbank:YP_169524.1,GeneID:3192051;gbkey=CDS;product=DNA mismatch repair protein;protein_id=YP_169524.1;transl_table=11
NC_006570.2	RefSeq	gene	507021	507755	.	+	.	ID=gene495;Name=FTT_0487;Dbxref=GeneID:3191398;gbkey=Gene;locus_tag=FTT_0487
NC_006570.2	RefSeq	CDS	507021	507755	.	+	0	ID=cds441;Name=YP_169525.1;Parent=gene495;Note=Similar to Q83AI9 Membrane protein%2C from Coxiella burnetii %28401 aa%29. FASTA: 306 opt: 370 Z-score: 417.4 E%28%29: 2.3e-15 Smith-Waterman score: 370%3B 30.342 identity in 234 aa overlap ORF ftt0487;Dbxref=InterPro:IPR011701,UniProtKB%2FTrEMBL:Q5NHG7,Genbank:YP_169525.1,GeneID:3191398;gbkey=CDS;product=hypothetical protein;protein_id=YP_169525.1;transl_table=11
NC_006570.2	RefSeq	gene	507762	508895	.	-	.	ID=gene496;Name=FTT_0488c;Dbxref=GeneID:3191397;gbkey=Gene;locus_tag=FTT_0488c
NC_006570.2	RefSeq	CDS	507762	508895	.	-	0	ID=cds442;Name=YP_169526.1;Parent=gene496;Note=Similar to Q83BM0 Major facilitator family transporter from Coxiella burnetii %28428 aa%29. FASTA: opt: 319 Z-score: E%28%29: 3.7e-11 Smith-Waterman score: 319%3B 21.951 identity in 369 aa overlap ORF ftt0488c;Dbxref=InterPro:IPR011701,UniProtKB%2FTrEMBL:Q5NHG6,Genbank:YP_169526.1,GeneID:3191397;gbkey=CDS;product=major facilitator transporter;protein_id=YP_169526.1;transl_table=11
NC_006570.2	RefSeq	gene	509037	509987	.	-	.	ID=gene497;Name=trxB;Dbxref=GeneID:3191000;gbkey=Gene;gene=trxB;locus_tag=FTT_0489c
NC_006570.2	RefSeq	CDS	509037	509987	.	-	0	ID=cds443;Name=YP_169527.1;Parent=gene497;Note=Similar to Q8ZGC9 Thioredoxin reductase from Yersinia pestis %28320 aa%29. FASTA: opt: 1525 Z-score: 1798.2 E%28%29: 2.9e-92 Smith-Waterman score: 1525%3B 70.927 identity in 313 aa overlap;Dbxref=GOA:Q5NHG5,InterPro:IPR013027,UniProtKB%2FTrEMBL:Q5NHG5,Genbank:YP_169527.1,GeneID:3191000;gbkey=CDS;product=thioredoxin reductase;protein_id=YP_169527.1;transl_table=11
NC_006570.2	RefSeq	gene	510079	511296	.	-	.	ID=gene498;Name=FTT_0490c;Dbxref=GeneID:3191396;gbkey=Gene;locus_tag=FTT_0490c
NC_006570.2	RefSeq	CDS	510079	511296	.	-	0	ID=cds444;Name=YP_169528.1;Parent=gene498;Note=Similar Q888K0 Phospholipase D family protein from Pseudomonas syringae %28pv. tomato%29 %28422 aa%29. FASTA: opt: 440 Z-score: 514.4 E%28%29: 9.2e-21 Smith-Waterman score: 440%3B 25.840 identity in 387 aa overlap ORF ftt0490c;Dbxref=GOA:Q5NHG4,InterPro:IPR001736,UniProtKB%2FTrEMBL:Q5NHG4,Genbank:YP_169528.1,GeneID:3191396;gbkey=CDS;product=phospholipase D;protein_id=YP_169528.1;transl_table=11
NC_006570.2	RefSeq	gene	511339	512013	.	-	.	ID=gene499;Name=gph;Dbxref=GeneID:3192528;gbkey=Gene;gene=gph;locus_tag=FTT_0491c
NC_006570.2	RefSeq	CDS	511339	512013	.	-	0	ID=cds445;Name=YP_169529.1;Parent=gene499;Note=Similar to Q82SZ4 Phosphoglycolate phosphatase from Nitrosomonas europaea %28240 aa%29. FASTA: opt: 432 Z-score: 532.2 E%28%29: 9.4e-22 Smith-Waterman score: 432%3B 33.486 identity in 218 aa overlap;Dbxref=GOA:Q5NHG3,InterPro:IPR006439,UniProtKB%2FTrEMBL:Q5NHG3,Genbank:YP_169529.1,GeneID:3192528;gbkey=CDS;product=phosphoglycolate phosphatase;protein_id=YP_169529.1;transl_table=11
NC_006570.2	RefSeq	gene	512054	512980	.	-	.	ID=gene500;Name=lysR;Dbxref=GeneID:3190932;gbkey=Gene;gene=lysR;locus_tag=FTT_0492c
NC_006570.2	RefSeq	CDS	512054	512980	.	-	0	ID=cds446;Name=YP_169530.1;Parent=gene500;Note=Similar to Q87J66 Transcriptional regulator%2C LysR family from Vibrio parahaemolyticus %28311 aa%29. FASTA: opt: 675 Z-score: 768.6 E%28%29: 6.4e-35 Smith-Waterman score: 675%3B 33.115 identity in 305 aa overlap;Dbxref=GOA:Q5NHG2,InterPro:IPR011991,UniProtKB%2FTrEMBL:Q5NHG2,Genbank:YP_169530.1,GeneID:3190932;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=YP_169530.1;transl_table=11
NC_006570.2	RefSeq	gene	513093	514264	.	+	.	ID=gene501;Name=FTT_0493;Dbxref=GeneID:3191394;gbkey=Gene;locus_tag=FTT_0493;pseudo=true
NC_006570.2	RefSeq	gene	514279	515001	.	-	.	ID=gene502;Name=cutC;Dbxref=GeneID:3191903;gbkey=Gene;gene=cutC;locus_tag=FTT_0494c
NC_006570.2	RefSeq	CDS	514279	515001	.	-	0	ID=cds447;Name=YP_169531.1;Parent=gene502;Note=Similar Q9CNA6 Hypothetical protein PM0526 from Pasteurella multocida %28244 aa%29. FASTA: opt: 521 Z-score: 651.2 E%28%29: 2.2e-28 Smith-Waterman score: 521%3B 40.175 identity in 229 aa overlap;Dbxref=GOA:Q5NHG1,InterPro:IPR005627,UniProtKB%2FTrEMBL:Q5NHG1,Genbank:YP_169531.1,GeneID:3191903;gbkey=CDS;product=CutC family protein;protein_id=YP_169531.1;transl_table=11
NC_006570.2	RefSeq	gene	515334	515837	.	+	.	ID=gene503;Name=FTT_0495;Dbxref=GeneID:3191393;gbkey=Gene;locus_tag=FTT_0495
NC_006570.2	RefSeq	CDS	515334	515837	.	+	0	ID=cds448;Name=YP_169532.1;Parent=gene503;Note=Similar to Q9K0Q8 Hypothetical protein NMB0526 from Neisseria meningitidis %28serogroup B%29 %28172 aa%29. FASTA: opt: 455 Z-score: 573.9 E%28%29: 4.5e-24 Smith-Waterman score: 455%3B 42.353 identity in 170 aa overlap ORF ftt0495;Dbxref=InterPro:IPR011440,UniProtKB%2FTrEMBL:Q5NHG0,Genbank:YP_169532.1,GeneID:3191393;gbkey=CDS;product=hypothetical protein;protein_id=YP_169532.1;transl_table=11
NC_006570.2	RefSeq	gene	515843	516607	.	+	.	ID=gene504;Name=FTT_0496;Dbxref=GeneID:3191392;gbkey=Gene;locus_tag=FTT_0496
NC_006570.2	RefSeq	CDS	515843	516607	.	+	0	ID=cds449;Name=YP_169533.1;Parent=gene504;Note=Similar to Q935B8 Hypothetical protein HCM2.0044c from Salmonella typhi %28251 aa%29. FASTA: opt: 242 Z-score: 297.7 E%28%29: 1.1e-08 Smith-Waterman score: 296%3B 28.000 identity in 250 aa overlap ORF ftt0496;Dbxref=UniProtKB%2FTrEMBL:Q5NHF9,Genbank:YP_169533.1,GeneID:3191392;gbkey=CDS;product=hypothetical protein;protein_id=YP_169533.1;transl_table=11
NC_006570.2	RefSeq	gene	516613	517522	.	-	.	ID=gene505;Name=FTT_0497c;Dbxref=GeneID:3191390;gbkey=Gene;locus_tag=FTT_0497c;pseudo=true
NC_006570.2	RefSeq	gene	517526	518971	.	-	.	ID=gene506;Name=FTT_0498c;Dbxref=GeneID:3191391;gbkey=Gene;locus_tag=FTT_0498c;pseudo=true
NC_006570.2	RefSeq	gene	519198	519920	.	+	.	ID=gene507;Name=FTT_0499;Dbxref=GeneID:3191389;gbkey=Gene;locus_tag=FTT_0499
NC_006570.2	RefSeq	CDS	519198	519920	.	+	0	ID=cds450;Name=YP_169534.1;Parent=gene507;Note=Similar to Q8ZA05 Hypothetical protein YPO4021 from Yersinia pestis %28414 aa%29. FASTA: opt: 230 Z-score: 284.7 E%28%29: 5.7e-08 Smith-Waterman score: 230%3B 24.779 identity in 226 aa overlap ORF ftt0499;Dbxref=UniProtKB%2FTrEMBL:Q5NHF8,Genbank:YP_169534.1,GeneID:3191389;gbkey=CDS;product=hypothetical protein;protein_id=YP_169534.1;transl_table=11
NC_006570.2	RefSeq	gene	520150	520410	.	+	.	ID=gene508;Name=FTT_0500;Dbxref=GeneID:3191387;gbkey=Gene;locus_tag=FTT_0500
NC_006570.2	RefSeq	CDS	520150	520410	.	+	0	ID=cds451;Name=YP_169535.1;Parent=gene508;Note=ORF ftt0500;Dbxref=UniProtKB%2FTrEMBL:Q5NHF7,Genbank:YP_169535.1,GeneID:3191387;gbkey=CDS;product=hypothetical protein;protein_id=YP_169535.1;transl_table=11
NC_006570.2	RefSeq	gene	520542	521582	.	-	.	ID=gene509;Name=FTT_0501c;Dbxref=GeneID:3191386;gbkey=Gene;locus_tag=FTT_0501c
NC_006570.2	RefSeq	CDS	520542	521582	.	-	0	ID=cds452;Name=YP_169536.1;Parent=gene509;Note=Similar to Q9I0I7 Hypothetical protein PA2651 from Pseudomonas aeruginosa %28352 aa%29. FASTA: opt: 382 Z-score: 397.1 E%28%29: 3.2e-14 Smith-Waterman score: 382%3B 26.686 identity in 341 aa overlap ORF ftt0501c;Dbxref=InterPro:IPR002549,UniProtKB%2FTrEMBL:Q5NHF6,Genbank:YP_169536.1,GeneID:3191386;gbkey=CDS;product=hypothetical protein;protein_id=YP_169536.1;transl_table=11
NC_006570.2	RefSeq	gene	521966	522391	.	-	.	ID=gene510;Name=FTT_0502c;Dbxref=GeneID:3191385;gbkey=Gene;locus_tag=FTT_0502c
NC_006570.2	RefSeq	CDS	521966	522391	.	-	0	ID=cds453;Name=YP_169537.1;Parent=gene510;Note=ORF ftt0502c;Dbxref=UniProtKB%2FTrEMBL:Q5NHF5,Genbank:YP_169537.1,GeneID:3191385;gbkey=CDS;product=hypothetical protein;protein_id=YP_169537.1;transl_table=11
NC_006570.2	RefSeq	gene	522503	523375	.	-	.	ID=gene511;Name=sucD;Dbxref=GeneID:3190740;gbkey=Gene;gene=sucD;locus_tag=FTT_0503c
NC_006570.2	RefSeq	CDS	522503	523375	.	-	0	ID=cds454;Name=YP_169538.1;Parent=gene511;Note=Similar to Q9JUS9  succinyl-CoA synthetase alpha from Neisseria meningitidis %28serogroup A%29 %28296 aa%29. FASTA: opt: 1574 Z-score: 1817.5 E%28%29: 2.4e-93 Smith-Waterman score: 1574%3B 81.661identity in 289 aa overlap;Dbxref=GOA:Q5NHF4,InterPro:IPR017440,UniProtKB%2FTrEMBL:Q5NHF4,Genbank:YP_169538.1,GeneID:3190740;gbkey=CDS;product=succinyl-CoA synthetase%2C alpha subunit;protein_id=YP_169538.1;transl_table=11
NC_006570.2	RefSeq	gene	523407	524570	.	-	.	ID=gene512;Name=sucC;Dbxref=GeneID:3190738;gbkey=Gene;gene=sucC;locus_tag=FTT_0504c
NC_006570.2	RefSeq	CDS	523407	524570	.	-	0	ID=cds455;Name=YP_169539.1;Parent=gene512;Note=catalyzes the interconversion of succinyl-CoA and succinate;Dbxref=GOA:Q5NHF3,InterPro:IPR017866,UniProtKB%2FSwiss-Prot:Q5NHF3,Genbank:YP_169539.1,GeneID:3190738;gbkey=CDS;product=succinyl-CoA synthetase subunit beta;protein_id=YP_169539.1;transl_table=11
NC_006570.2	RefSeq	gene	524740	526653	.	+	.	ID=gene513;Name=FTT_0505;Dbxref=GeneID:3191381;gbkey=Gene;locus_tag=FTT_0505
NC_006570.2	RefSeq	CDS	524740	526653	.	+	0	ID=cds456;Name=YP_169540.1;Parent=gene513;Note=ORF ftt0505;Dbxref=UniProtKB%2FTrEMBL:Q5NHF2,Genbank:YP_169540.1,GeneID:3191381;gbkey=CDS;product=hypothetical protein;protein_id=YP_169540.1;transl_table=11
NC_006570.2	RefSeq	gene	526661	526975	.	-	.	ID=gene514;Name=FTT_0506c;Dbxref=GeneID:3191384;gbkey=Gene;locus_tag=FTT_0506c
NC_006570.2	RefSeq	CDS	526661	526975	.	-	0	ID=cds457;Name=YP_169541.1;Parent=gene514;Note=ORF ftt0506c;Dbxref=UniProtKB%2FTrEMBL:Q5NHF1,Genbank:YP_169541.1,GeneID:3191384;gbkey=CDS;product=hypothetical protein;protein_id=YP_169541.1;transl_table=11
NC_006570.2	RefSeq	gene	527634	528401	.	+	.	ID=gene515;Name=FTT_0507;Dbxref=GeneID:3191382;gbkey=Gene;locus_tag=FTT_0507
NC_006570.2	RefSeq	CDS	527634	528401	.	+	0	ID=cds458;Name=YP_169542.1;Parent=gene515;Note=Similar to Q9X610 BcfH from Salmonella typhimurium %28269 aa%29. FASTA: opt: 305 Z-score: 371.4 E%28%29: 8.5e-13 Smith-Waterman score: 305%3B 31.122 identity in 196 aa overlap ORF ftt0507;Dbxref=UniProtKB%2FTrEMBL:Q5NHF0,Genbank:YP_169542.1,GeneID:3191382;gbkey=CDS;product=lipoprotein;protein_id=YP_169542.1;transl_table=11
NC_006570.2	RefSeq	gene	528408	529391	.	-	.	ID=gene516;Name=dusA;Dbxref=GeneID:3191548;gbkey=Gene;gene=dusA;locus_tag=FTT_0508c
NC_006570.2	RefSeq	CDS	528408	529391	.	-	0	ID=cds459;Name=YP_169543.1;Parent=gene516;Note=Similar to Y926_SYNY3 %28P72872%29 Hypothetical protein sll0926 from Synechocystis sp. %28strain PCC 6803%29 %28334 aa%29. FASTA: opt: 1129 Z-score: 1337.0 E%28%29: 1.4e-66 Smith-Waterman score: 1129%3B 51.911 identity in 314 aa overlap;Dbxref=GOA:Q5NHE9,InterPro:IPR013785,UniProtKB%2FTrEMBL:Q5NHE9,Genbank:YP_169543.1,GeneID:3191548;gbkey=CDS;product=tRNA-dihydrouridine synthase A;protein_id=YP_169543.1;transl_table=11
NC_006570.2	RefSeq	gene	529425	530225	.	-	.	ID=gene517;Name=FTT_0509c;Dbxref=GeneID:3191380;gbkey=Gene;locus_tag=FTT_0509c
NC_006570.2	RefSeq	CDS	529425	530225	.	-	0	ID=cds460;Name=YP_169544.1;Parent=gene517;Note=Similar to Q8DBN3 Conserved hypothetical protein from Vibrio vulnificus %28184 aa%29. FASTA: opt: 275 Z-score: 356.8 E%28%29: 5.5e-12 Smith-Waterman score: 275%3B 30.208 identity in 192 aa overlap ORF ftt0509c;Dbxref=UniProtKB%2FTrEMBL:Q5NHE8,Genbank:YP_169544.1,GeneID:3191380;gbkey=CDS;product=hypothetical protein;protein_id=YP_169544.1;transl_table=11
NC_006570.2	RefSeq	gene	530401	532818	.	+	.	ID=gene518;Name=gyrB;Dbxref=GeneID:3192346;gbkey=Gene;gene=gyrB;locus_tag=FTT_0510
NC_006570.2	RefSeq	CDS	530401	532818	.	+	0	ID=cds461;Name=YP_169545.1;Parent=gene518;Note=Similar to GYRB_SALTY %28Q60008%29 DNA gyrase subunit B from Salmonella typhimurium %28803 aa%29. FASTA: opt: 3370 Z-score: 3873.3 E%28%29: 7.5e-208 Smith-Waterman score: 3370%3B 63.321 identity in 807 aa overlap;Dbxref=GOA:Q5NHE7,InterPro:IPR018522,UniProtKB%2FTrEMBL:Q5NHE7,Genbank:YP_169545.1,GeneID:3192346;gbkey=CDS;product=DNA gyrase subunit B;protein_id=YP_169545.1;transl_table=11
NC_006570.2	RefSeq	gene	532948	533811	.	+	.	ID=gene519;Name=FTT_0511;Dbxref=GeneID:3191379;gbkey=Gene;locus_tag=FTT_0511
NC_006570.2	RefSeq	CDS	532948	533811	.	+	0	ID=cds462;Name=YP_169546.1;Parent=gene519;Note=with PdxT forms pyridoxal 5%27-phosphate from glutamine%2C either ribose 5-phosphate or ribulose 5-phosphate%2C and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate;Dbxref=GOA:Q5NHE6,InterPro:IPR001852,UniProtKB%2FSwiss-Prot:Q5NHE6,Genbank:YP_169546.1,GeneID:3191379;gbkey=CDS;product=pyridoxal biosynthesis lyase PdxS;protein_id=YP_169546.1;transl_table=11
NC_006570.2	RefSeq	gene	533805	534353	.	+	.	ID=gene520;Name=FTT_0512;Dbxref=GeneID:3191376;gbkey=Gene;locus_tag=FTT_0512
NC_006570.2	RefSeq	CDS	533805	534353	.	+	0	ID=cds463;Name=YP_169547.3;Parent=gene520;Note=with PdxST is involved in the biosynthesis of pyridoxal 5%27-phosphate%3B PdxT catalyzes the hydrolysis of glutamine to glutamate and ammonia%3B PdxS utilizes the ammonia to synthesize pyridoxal 5%27-phosphate;Dbxref=GOA:Q5NHE5,InterPro:IPR002161,UniProtKB%2FSwiss-Prot:Q5NHE5,Genbank:YP_169547.3,GeneID:3191376;gbkey=CDS;product=glutamine amidotransferase subunit PdxT;protein_id=YP_169547.3;transl_table=11
NC_006570.2	RefSeq	repeat_region	534358	534369	.	-	.	ID=id88;Note=ISFtu1 12bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	gene	534457	535241	.	-	.	ID=gene521;Name=isftu1;Dbxref=GeneID:3190798;gbkey=Gene;gene=isftu1;locus_tag=FTT_0513c
NC_006570.2	RefSeq	CDS	534915	535241	.	-	0	ID=cds464;Name=YP_169548.1;Parent=gene521;Note=ISFtu1. Transposase%2C member of the IS630 Tc-1 mariner family. Identical to Q93EJ6  transposase from Francisella tularensis %28118 aa%29 from aa 144-261. Identical to Q93EJ7  transposase from Francisella tularensis %28126 aa%29 from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF%27s. ORF1 %28identical to Q93EJ7%29 contains a programmed ribosomal frameshifting motif%2C 5%27-AAAAAAAG-3%27 at aa position 109 which permits frameshifting to ORF2 %28identical to Q93EJ6%29 to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family%2C and also mariner elements%2C show that this transposase shares strongly conserved residues%2C including a fully conserved dipeptide%2CAsp-Glu %28DE%29%2C and a block consisting of a fully conserved Asp and highly conserved Glu%2C separated by 34 or 35 residues %28D35E%29. The conserved dipeptide is only present if ribosomal frameshifting occurs.;Dbxref=UniProtKB%2FTrEMBL:Q5NIH2,Genbank:YP_169548.1,GeneID:3190798;gbkey=CDS;product=transposase;protein_id=YP_169548.1;transl_table=11
NC_006570.2	RefSeq	CDS	534457	534915	.	-	0	ID=cds464;Name=YP_169548.1;Parent=gene521;Note=ISFtu1. Transposase%2C member of the IS630 Tc-1 mariner family. Identical to Q93EJ6  transposase from Francisella tularensis %28118 aa%29 from aa 144-261. Identical to Q93EJ7  transposase from Francisella tularensis %28126 aa%29 from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF%27s. ORF1 %28identical to Q93EJ7%29 contains a programmed ribosomal frameshifting motif%2C 5%27-AAAAAAAG-3%27 at aa position 109 which permits frameshifting to ORF2 %28identical to Q93EJ6%29 to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family%2C and also mariner elements%2C show that this transposase shares strongly conserved residues%2C including a fully conserved dipeptide%2CAsp-Glu %28DE%29%2C and a block consisting of a fully conserved Asp and highly conserved Glu%2C separated by 34 or 35 residues %28D35E%29. The conserved dipeptide is only present if ribosomal frameshifting occurs.;Dbxref=UniProtKB%2FTrEMBL:Q5NIH2,Genbank:YP_169548.1,GeneID:3190798;gbkey=CDS;product=transposase;protein_id=YP_169548.1;transl_table=11
NC_006570.2	RefSeq	repeat_region	535262	535277	.	-	.	ID=id89;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	535278	535293	.	-	.	ID=id90;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	535294	535305	.	-	.	ID=id91;Note=ISFtu1 12bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	gene	535309	536435	.	+	.	ID=gene522;Name=lldD2;Dbxref=GeneID:3190779;gbkey=Gene;gene=lldD2;locus_tag=FTT_0514;pseudo=true
NC_006570.2	RefSeq	gene	536458	536634	.	+	.	ID=gene523;Name=FTT_0515;Dbxref=GeneID:3191377;gbkey=Gene;locus_tag=FTT_0515
NC_006570.2	RefSeq	CDS	536458	536634	.	+	0	ID=cds465;Name=YP_169549.1;Parent=gene523;Note=ORF ftt0515;Dbxref=UniProtKB%2FTrEMBL:Q5NHE3,Genbank:YP_169549.1,GeneID:3191377;gbkey=CDS;product=hypothetical protein;protein_id=YP_169549.1;transl_table=11
NC_006570.2	RefSeq	gene	536773	539899	.	+	.	ID=gene524;Name=FTT_0516;Dbxref=GeneID:3191375;gbkey=Gene;locus_tag=FTT_0516;pseudo=true
NC_006570.2	RefSeq	gene	539917	541075	.	+	.	ID=gene525;Name=FTT_0517;Dbxref=GeneID:3191374;gbkey=Gene;locus_tag=FTT_0517;pseudo=true
NC_006570.2	RefSeq	gene	541312	542157	.	+	.	ID=gene526;Name=prmA;Dbxref=GeneID:3191234;gbkey=Gene;gene=prmA;locus_tag=FTT_0518
NC_006570.2	RefSeq	CDS	541312	542157	.	+	0	ID=cds466;Name=YP_169550.1;Parent=gene526;Note=Similar to Q9CLW2 PrmA %28Ribosomal protein L11 methyltransferase%29 from Pasteurella multocida %28293 aa%29. FASTA: opt: 572 Z-score: 685.5 E%28%29: 2.7e-30 Smith-Waterman score: 580%3B 33.677 identity in 291 aa overlap;Dbxref=GOA:Q5NHE2,InterPro:IPR010456,UniProtKB%2FTrEMBL:Q5NHE2,Genbank:YP_169550.1,GeneID:3191234;gbkey=CDS;product=50S ribosomal protein L11 methyltransferase;protein_id=YP_169550.1;transl_table=11
NC_006570.2	RefSeq	gene	542147	543130	.	+	.	ID=gene527;Name=FTT_0519;Dbxref=GeneID:3191226;gbkey=Gene;locus_tag=FTT_0519
NC_006570.2	RefSeq	CDS	542147	543130	.	+	0	ID=cds467;Name=YP_169551.1;Parent=gene527;Note=Similar to Q9KGG5 Transcriptional regulator involved in nitrogen regulation%2C NifR3%2FSmm1 family from Bacillus halodurans %28334 aa%29. FASTA: opt: 1134 Z-score: 1336.1 E%28%29: 1.6e-66 Smith-Waterman score: 1134%3B 52.484 identity in 322 aa overlap ORF ftt0519;Dbxref=GOA:Q5NHE1,InterPro:IPR018517,UniProtKB%2FTrEMBL:Q5NHE1,Genbank:YP_169551.1,GeneID:3191226;gbkey=CDS;product=Nif3 family protein;protein_id=YP_169551.1;transl_table=11
NC_006570.2	RefSeq	gene	543360	543953	.	+	.	ID=gene528;Name=FTT_0520;Dbxref=GeneID:3191224;gbkey=Gene;locus_tag=FTT_0520
NC_006570.2	RefSeq	CDS	543360	543953	.	+	0	ID=cds468;Name=YP_169552.1;Parent=gene528;Note=ORF ftt0520;Dbxref=UniProtKB%2FTrEMBL:Q5NHE0,Genbank:YP_169552.1,GeneID:3191224;gbkey=CDS;product=hypothetical protein;protein_id=YP_169552.1;transl_table=11
NC_006570.2	RefSeq	gene	543954	544361	.	+	.	ID=gene529;Name=FTT_0521;Dbxref=GeneID:3191222;gbkey=Gene;locus_tag=FTT_0521;pseudo=true
NC_006570.2	RefSeq	gene	544480	545457	.	+	.	ID=gene530;Name=FTT_0522;Dbxref=GeneID:3191223;gbkey=Gene;locus_tag=FTT_0522
NC_006570.2	RefSeq	CDS	544480	545457	.	+	0	ID=cds469;Name=YP_169553.1;Parent=gene530;Note=Similar to Q8EGY1 Type I restriction-modification system%2C M subunit%2C  from Shewanella oneidensis %28684 aa%29. FASTA: opt: 278 Z-score: 287.3 E%28%29: 4.1e-08 Smith-Waterman score: 291%3B 31.081 identity in 222 aa overlap ORF ftt0522;Dbxref=GOA:Q5NHD9,InterPro:IPR003356,UniProtKB%2FTrEMBL:Q5NHD9,Genbank:YP_169553.1,GeneID:3191223;gbkey=CDS;product=hypothetical protein;protein_id=YP_169553.1;transl_table=11
NC_006570.2	RefSeq	gene	545582	546808	.	+	.	ID=gene531;Name=FTT_0523;Dbxref=GeneID:3191219;gbkey=Gene;locus_tag=FTT_0523
NC_006570.2	RefSeq	CDS	545582	546808	.	+	0	ID=cds470;Name=YP_169554.1;Parent=gene531;Note=Similar to Q89Z57 Type I restriction enzyme EcoAI specificity protein from Bacteroides thetaiotamicron %28474 aa%29. FASTA: opt: 208 Z-score: 239.0 E%28%29: 2e-05 Smith-Waterman score: 246%3B 24.363 identity in 353 aa overlap ORF ftt0523;Dbxref=GOA:Q5NHD8,InterPro:IPR000055,UniProtKB%2FTrEMBL:Q5NHD8,Genbank:YP_169554.1,GeneID:3191219;gbkey=CDS;product=hypothetical protein;protein_id=YP_169554.1;transl_table=11
NC_006570.2	RefSeq	gene	547050	547436	.	+	.	ID=gene532;Name=FTT_0524;Dbxref=GeneID:3191220;gbkey=Gene;locus_tag=FTT_0524
NC_006570.2	RefSeq	CDS	547050	547436	.	+	0	ID=cds471;Name=YP_169555.1;Parent=gene532;Note=Similar to Q8KBB0 Hypothetical protein CT1879 from Chlorobium tepidum %28193 aa%29. FASTA: opt: 467 Z-score: 629.2 E%28%29: 3.7e-27 Smith-Waterman score: 467%3B 60.656 identity in 122 aa overlap ORF ftt0524;Dbxref=GOA:Q5NHD7,InterPro:IPR007569,UniProtKB%2FTrEMBL:Q5NHD7,Genbank:YP_169555.1,GeneID:3191220;gbkey=CDS;product=hypothetical protein;protein_id=YP_169555.1;transl_table=11
NC_006570.2	RefSeq	gene	547483	548139	.	+	.	ID=gene533;Name=FTT_0525;Dbxref=GeneID:3191218;gbkey=Gene;locus_tag=FTT_0525
NC_006570.2	RefSeq	CDS	547483	548139	.	+	0	ID=cds472;Name=YP_169556.1;Parent=gene533;Note=Similar to RA50_THEVO DNA double-strand break repair rad50 ATPase from Thermoplasma volcanicum %28895 aa%29. FASTA: opt: 188 Z-score: 215.6 E%28%29: 0.0004 Smith-Waterman score: 188%3B 25.926 identity in 216 aa overlap. Similarity to N terminal domain ORF ftt0525;Dbxref=UniProtKB%2FTrEMBL:Q5NHD6,Genbank:YP_169556.1,GeneID:3191218;gbkey=CDS;product=hypothetical protein;protein_id=YP_169556.1;transl_table=11
NC_006570.2	RefSeq	gene	548145	548351	.	+	.	ID=gene534;Name=FTT_0526;Dbxref=GeneID:3191216;gbkey=Gene;locus_tag=FTT_0526
NC_006570.2	RefSeq	CDS	548145	548351	.	+	0	ID=cds473;Name=YP_169557.1;Parent=gene534;Note=ORF ftt0526;Dbxref=UniProtKB%2FTrEMBL:Q5NHD5,Genbank:YP_169557.1,GeneID:3191216;gbkey=CDS;product=hypothetical protein;protein_id=YP_169557.1;transl_table=11
NC_006570.2	RefSeq	gene	548372	549175	.	+	.	ID=gene535;Name=FTT_0527;Dbxref=GeneID:3191213;gbkey=Gene;locus_tag=FTT_0527
NC_006570.2	RefSeq	CDS	548372	549175	.	+	0	ID=cds474;Name=YP_169558.1;Parent=gene535;Note=ORF ftt0527;Dbxref=UniProtKB%2FTrEMBL:Q5NHD4,Genbank:YP_169558.1,GeneID:3191213;gbkey=CDS;product=hypothetical protein;protein_id=YP_169558.1;transl_table=11
NC_006570.2	RefSeq	gene	549172	549549	.	+	.	ID=gene536;Name=FTT_0528;Dbxref=GeneID:3191214;gbkey=Gene;locus_tag=FTT_0528
NC_006570.2	RefSeq	CDS	549172	549549	.	+	0	ID=cds475;Name=YP_169559.1;Parent=gene536;Note=ORF ftt0528;Dbxref=UniProtKB%2FTrEMBL:Q5NHD3,Genbank:YP_169559.1,GeneID:3191214;gbkey=CDS;product=hypothetical protein;protein_id=YP_169559.1;transl_table=11
NC_006570.2	RefSeq	gene	549569	550617	.	-	.	ID=gene537;Name=dinP;Dbxref=GeneID:3191522;gbkey=Gene;gene=dinP;locus_tag=FTT_0529c;pseudo=true
NC_006570.2	RefSeq	gene	550624	551226	.	-	.	ID=gene538;Name=FTT_0530c;Dbxref=GeneID:3191211;gbkey=Gene;locus_tag=FTT_0530c
NC_006570.2	RefSeq	CDS	550624	551226	.	-	0	ID=cds476;Name=YP_169560.1;Parent=gene538;Note=Similar to Q97FB4 Intracellular protease%2Famidase related enzyme from Clostridium acetobutylicum %28201 aa%29. FASTA: opt: 703 Z-score: 884.5 E%28%29: 2.2e-41 Smith-Waterman score: 703%3B 51.531 identity in 196 aa overlap ORF ftt0530c;Dbxref=InterPro:IPR002818,UniProtKB%2FTrEMBL:Q5NHD2,Genbank:YP_169560.1,GeneID:3191211;gbkey=CDS;product=DJ-1%2FPfpI family protein;protein_id=YP_169560.1;transl_table=11
NC_006570.2	RefSeq	gene	551337	553231	.	+	.	ID=gene539;Name=FTT_0531;Dbxref=GeneID:3191212;gbkey=Gene;locus_tag=FTT_0531;pseudo=true
NC_006570.2	RefSeq	gene	553228	554460	.	-	.	ID=gene540;Name=grxC;Dbxref=GeneID:3191711;gbkey=Gene;gene=grxC;locus_tag=FTT_0532c
NC_006570.2	RefSeq	CDS	553228	554460	.	-	0	ID=cds477;Name=YP_169561.1;Parent=gene540;Note=Similar to %28glutaredoxin 3%29 Q8ZJM8 Glutaredoxin 3 from Yersinia pestis %2882 aa%29. FASTA: opt: 181 Z-score: 263.7 E%28%29: 8.5e-07 Smith-Waterman score: 181%3B 40.260 identity in 77 aa overlap%2C%28ribonucleoside-diphosphate reductase%29 Q8QYZ8 Ribonucleoside-diphosphate reductase%2C beta subunit-like protein from Rana tigrina ranavirus %28387 aa%29. FASTA: opt: 1124 Z-score: 1382.6 E%28%29: 4.1e-69 Smith-Waterman score: 1124%3B 51.703 identity in 323 aa overlap;Dbxref=GOA:Q5NHD1,InterPro:IPR014025,UniProtKB%2FTrEMBL:Q5NHD1,Genbank:YP_169561.1,GeneID:3191711;gbkey=CDS;product=bifunctional gluaredoxin%2Fribonucleoside-diphosphate reductase subunit beta;protein_id=YP_169561.1;transl_table=11
NC_006570.2	RefSeq	gene	554467	554727	.	-	.	ID=gene541;Name=grxA;Dbxref=GeneID:3192520;gbkey=Gene;gene=grxA;locus_tag=FTT_0533c
NC_006570.2	RefSeq	CDS	554467	554727	.	-	0	ID=cds478;Name=YP_169562.1;Parent=gene541;Note=Similar to GLR1_ECOLI %28P00277%29 Glutaredoxin 1 from Escherichia coli %2885 aa%29. FASTA: opt: 191 Z-score: 274.9 E%28%29: 2e-07 Smith-Waterman score: 191%3B 40.000identity in 80 aa overlap;Dbxref=GOA:Q5NHD0,InterPro:IPR014025,UniProtKB%2FTrEMBL:Q5NHD0,Genbank:YP_169562.1,GeneID:3192520;gbkey=CDS;product=glutaredoxin;protein_id=YP_169562.1;transl_table=11
NC_006570.2	RefSeq	gene	554731	556503	.	-	.	ID=gene542;Name=nrdA;Dbxref=GeneID:3191708;gbkey=Gene;gene=nrdA;locus_tag=FTT_0534c
NC_006570.2	RefSeq	CDS	554731	556503	.	-	0	ID=cds479;Name=YP_169563.1;Parent=gene542;Note=Catalyzes the rate-limiting step in dNTP synthesis;Dbxref=GOA:Q5NHC9,InterPro:IPR013509,UniProtKB%2FTrEMBL:Q5NHC9,Genbank:YP_169563.1,GeneID:3191708;gbkey=CDS;product=ribonucleotide-diphosphate reductase subunit alpha;protein_id=YP_169563.1;transl_table=11
NC_006570.2	RefSeq	gene	556707	557666	.	-	.	ID=gene543;Name=mdh;Dbxref=GeneID:3191869;gbkey=Gene;gene=mdh;locus_tag=FTT_0535c
NC_006570.2	RefSeq	CDS	556707	557666	.	-	0	ID=cds480;Name=YP_169564.1;Parent=gene543;Note=Catalyzes the reversible oxidation of malate to oxaloacetate;Dbxref=GOA:Q8G942,HSSP:1UR5,InterPro:IPR016040,UniProtKB%2FTrEMBL:Q8G942,Genbank:YP_169564.1,GeneID:3191869;gbkey=CDS;product=malate dehydrogenase;protein_id=YP_169564.1;transl_table=11
NC_006570.2	RefSeq	gene	557814	558329	.	+	.	ID=gene544;Name=FTT_0536;Dbxref=GeneID:3191210;gbkey=Gene;locus_tag=FTT_0536
NC_006570.2	RefSeq	CDS	557814	558329	.	+	0	ID=cds481;Name=YP_169565.1;Parent=gene544;Note=ORF ftt0536;Dbxref=UniProtKB%2FTrEMBL:Q5NHC7,Genbank:YP_169565.1,GeneID:3191210;gbkey=CDS;product=hypothetical protein;protein_id=YP_169565.1;transl_table=11
NC_006570.2	RefSeq	gene	558345	558980	.	+	.	ID=gene545;Name=FTT_0537;Dbxref=GeneID:3191209;gbkey=Gene;locus_tag=FTT_0537
NC_006570.2	RefSeq	CDS	558345	558980	.	+	0	ID=cds482;Name=YP_169566.1;Parent=gene545;Note=Similar to Q8PD67 Ubiquinone biosynthesis protein from Xanthomonas campestris %28217 aa%29. FASTA: opt: 710 Z-score: 878.4 E%28%29: 4.9e-41 Smith-Waterman score: 710%3B 51.887 identity in 212 aa overlap %282-211:8-217%29 ORF ftt0537;Dbxref=GOA:Q5NHC6,InterPro:IPR012347,UniProtKB%2FSwiss-Prot:Q5NHC6,Genbank:YP_169566.1,GeneID:3191209;gbkey=CDS;product=ubiquinone biosynthesis protein;protein_id=YP_169566.1;transl_table=11
NC_006570.2	RefSeq	gene	558989	559558	.	-	.	ID=gene546;Name=FTT_0538c;Dbxref=GeneID:3191206;gbkey=Gene;locus_tag=FTT_0538c
NC_006570.2	RefSeq	CDS	558989	559558	.	-	0	ID=cds483;Name=YP_169567.1;Parent=gene546;Note=Similar to Q87LS3 Hypothetical protein from Vibrio parahaemolyticus %28203 aa%29. FASTA: opt: 267 Z-score: 350.1 E%28%29: 1.3e-11 Smith-Waterman score: 320%3B 31.795 identity in 195 aa overlap ORF ftt0538c;Dbxref=InterPro:IPR008258,UniProtKB%2FTrEMBL:Q5NHC5,Genbank:YP_169567.1,GeneID:3191206;gbkey=CDS;product=lipoprotein;protein_id=YP_169567.1;transl_table=11
NC_006570.2	RefSeq	gene	559636	560379	.	-	.	ID=gene547;Name=FTT_0539c;Dbxref=GeneID:3191207;gbkey=Gene;locus_tag=FTT_0539c;pseudo=true
NC_006570.2	RefSeq	gene	560383	561873	.	-	.	ID=gene548;Name=FTT_0540c;Dbxref=GeneID:3191205;gbkey=Gene;locus_tag=FTT_0540c
NC_006570.2	RefSeq	CDS	560383	561873	.	-	0	ID=cds484;Name=YP_169568.1;Parent=gene548;Note=ORF ftt0540c;Dbxref=UniProtKB%2FTrEMBL:Q5NHC4,Genbank:YP_169568.1,GeneID:3191205;gbkey=CDS;product=hypothetical protein;protein_id=YP_169568.1;transl_table=11
NC_006570.2	RefSeq	gene	561928	562527	.	-	.	ID=gene549;Name=yqaB;Dbxref=GeneID:3192402;gbkey=Gene;gene=yqaB;locus_tag=FTT_0541c
NC_006570.2	RefSeq	CDS	561928	562527	.	-	0	ID=cds485;Name=YP_169569.1;Parent=gene549;Note=Similar to YQAB_ECOLI %28P77475%29 Hypothetical protein yqaB from Escherichia coli %28188 aa%29. FASTA: opt: 336 Z-score: 422.2 E%28%29: 1.3e-15 Smith-Waterman score: 336%3B 33.889 identity in 180 aa overlap;Dbxref=GOA:Q5NHC3,InterPro:IPR005834,UniProtKB%2FTrEMBL:Q5NHC3,Genbank:YP_169569.1,GeneID:3192402;gbkey=CDS;product=haloacid dehalogenase;protein_id=YP_169569.1;transl_table=11
NC_006570.2	RefSeq	gene	562605	563203	.	+	.	ID=gene550;Name=FTT_0542;Dbxref=GeneID:3191201;gbkey=Gene;locus_tag=FTT_0542;pseudo=true
NC_006570.2	RefSeq	gene	563268	564644	.	+	.	ID=gene551;Name=FTT_0543;Dbxref=GeneID:3191204;gbkey=Gene;locus_tag=FTT_0543
NC_006570.2	RefSeq	CDS	563268	564644	.	+	0	ID=cds486;Name=YP_169570.1;Parent=gene551;Note=ORF ftt0543;Dbxref=UniProtKB%2FTrEMBL:Q5NHC2,Genbank:YP_169570.1,GeneID:3191204;gbkey=CDS;product=hypothetical protein;protein_id=YP_169570.1;transl_table=11
NC_006570.2	RefSeq	gene	564750	565082	.	+	.	ID=gene552;Name=phnA;Dbxref=GeneID:3191136;gbkey=Gene;gene=phnA;locus_tag=FTT_0544
NC_006570.2	RefSeq	CDS	564750	565082	.	+	0	ID=cds487;Name=YP_169571.1;Parent=gene552;Note=Similar to PHNA_ECOLI PhnA protein from Escherichia coli %28111 aa%29. FASTA: opt: 521 Z-score: 674.6 E%28%29: 1.1e-29 Smith-Waterman score: 521%3B 66.972identity in 109 aa overlap;Dbxref=GOA:Q5NHC1,InterPro:IPR013988,UniProtKB%2FTrEMBL:Q5NHC1,Genbank:YP_169571.1,GeneID:3191136;gbkey=CDS;product=phosphonoacetate hydrolase;protein_id=YP_169571.1;transl_table=11
NC_006570.2	RefSeq	gene	565088	565303	.	+	.	ID=gene553;Name=FTT_0545;Dbxref=GeneID:3191203;gbkey=Gene;locus_tag=FTT_0545
NC_006570.2	RefSeq	CDS	565088	565303	.	+	0	ID=cds488;Name=YP_169572.1;Parent=gene553;Note=ORF ftt0545;Dbxref=UniProtKB%2FTrEMBL:Q5NHC0,Genbank:YP_169572.1,GeneID:3191203;gbkey=CDS;product=hypothetical protein;protein_id=YP_169572.1;transl_table=11
NC_006570.2	RefSeq	gene	565307	565918	.	+	.	ID=gene554;Name=FTT_0546;Dbxref=GeneID:3191202;gbkey=Gene;locus_tag=FTT_0546
NC_006570.2	RefSeq	CDS	565307	565918	.	+	0	ID=cds489;Name=YP_169573.1;Parent=gene554;Note=ORF ftt0546;Dbxref=UniProtKB%2FTrEMBL:Q5NHB9,Genbank:YP_169573.1,GeneID:3191202;gbkey=CDS;product=hypothetical protein;protein_id=YP_169573.1;transl_table=11
NC_006570.2	RefSeq	gene	566273	566806	.	+	.	ID=gene555;Name=FTT_0547;Dbxref=GeneID:3191199;gbkey=Gene;locus_tag=FTT_0547
NC_006570.2	RefSeq	CDS	566273	566806	.	+	0	ID=cds490;Name=YP_169574.1;Parent=gene555;Note=ORF ftt0547;Dbxref=UniProtKB%2FTrEMBL:Q5NHB8,Genbank:YP_169574.1,GeneID:3191199;gbkey=CDS;product=hypothetical protein;protein_id=YP_169574.1;transl_table=11
NC_006570.2	RefSeq	gene	566858	567550	.	+	.	ID=gene556;Name=dnaQ;Dbxref=GeneID:3191535;gbkey=Gene;gene=dnaQ;locus_tag=FTT_0548
NC_006570.2	RefSeq	CDS	566858	567550	.	+	0	ID=cds491;Name=YP_169575.1;Parent=gene556;Note=Similar to Q83EK2 DNA polymerase III%2C epsilon subunit from Coxiella burnetii %28232 aa%29. FASTA: opt: 699 Z-score: 870.8 E%28%29: 1.3e-40 Smith-Waterman score: 699%3B 49.550 identity in 222 aa overlap;Dbxref=GOA:Q5NHB7,InterPro:IPR013520,UniProtKB%2FTrEMBL:Q5NHB7,Genbank:YP_169575.1,GeneID:3191535;gbkey=CDS;product=DNA polymerase III subunit epsilon;protein_id=YP_169575.1;transl_table=11
NC_006570.2	RefSeq	gene	567544	568017	.	+	.	ID=gene557;Name=vanY;Dbxref=GeneID:3191938;gbkey=Gene;gene=vanY;locus_tag=FTT_0549
NC_006570.2	RefSeq	CDS	567544	568017	.	+	0	ID=cds492;Name=YP_169576.1;Parent=gene557;Note=Similar to Q87AM4 Peptidase %28202 aa%29. FASTA: opt: 481 Z-score: 603.7 E%28%29: 9.8e-26 Smith-Waterman score: 481%3B 50.000 identity in 142 aa overlap;Dbxref=GOA:Q5NHB6,InterPro:IPR003709,UniProtKB%2FTrEMBL:Q5NHB6,Genbank:YP_169576.1,GeneID:3191938;gbkey=CDS;product=D-alanyl-D-alanine carboxypeptidase;protein_id=YP_169576.1;transl_table=11
NC_006570.2	RefSeq	gene	567977	569413	.	+	.	ID=gene558;Name=FTT_0550;Dbxref=GeneID:3191200;gbkey=Gene;locus_tag=FTT_0550
NC_006570.2	RefSeq	CDS	567977	569413	.	+	0	ID=cds493;Name=YP_169577.1;Parent=gene558;Note=Similar to Q8EHZ3 TPR domain protein from Shewanella oneidensis %28466 aa%29. FASTA: opt: 304 Z-score: 346.2 E%28%29: 2.2e-11 Smith-Waterman score: 331%3B 23.333 identity%29 in 480 aa overlap ORF ftt0550;Dbxref=UniProtKB%2FTrEMBL:Q5NHB5,Genbank:YP_169577.1,GeneID:3191200;gbkey=CDS;product=hypothetical protein;protein_id=YP_169577.1;transl_table=11
NC_006570.2	RefSeq	gene	569774	570833	.	+	.	ID=gene559;Name=FTT_0551;Dbxref=GeneID:3191198;gbkey=Gene;locus_tag=FTT_0551;pseudo=true
NC_006570.2	RefSeq	gene	570846	572342	.	+	.	ID=gene560;Name=FTT_0552;Dbxref=GeneID:3191197;gbkey=Gene;locus_tag=FTT_0552
NC_006570.2	RefSeq	CDS	570846	572342	.	+	0	ID=cds494;Name=YP_169578.1;Parent=gene560;Note=Similar to Q8P9Q7 Aldehyde dehydrogenase from Xanthomonas campestris %28510 aa%29. FASTA: opt: 1972 Z-score: 2329.9 E%28%29: 6.9e-122 Smith-Waterman score: 1972%3B 60.285 identity in 491 aa overlap ORF ftt0552;Dbxref=GOA:Q5NHB4,InterPro:IPR016162,UniProtKB%2FTrEMBL:Q5NHB4,Genbank:YP_169578.1,GeneID:3191197;gbkey=CDS;product=aldehyde dehydrogenase;protein_id=YP_169578.1;transl_table=11
NC_006570.2	RefSeq	gene	572347	573126	.	+	.	ID=gene561;Name=FTT_0553;Dbxref=GeneID:3191762;gbkey=Gene;locus_tag=FTT_0553
NC_006570.2	RefSeq	CDS	572347	573126	.	+	0	ID=cds495;Name=YP_169579.1;Parent=gene561;Note=Similar to Q8EJ53 Conserved hypothetical protein from Shewanella oneidensis %28267 aa%29. FASTA: opt: 859 Z-score: 1057.9 E%28%29: 4.9e-51 Smith-Waterman score: 859%3B 52.809 identity in 267 aa overlap ORF ftt0553;Dbxref=UniProtKB%2FTrEMBL:Q5NHB3,Genbank:YP_169579.1,GeneID:3191762;gbkey=CDS;product=hypothetical protein;protein_id=YP_169579.1;transl_table=11
NC_006570.2	RefSeq	gene	573210	573482	.	+	.	ID=gene562;Name=FTT_0554;Dbxref=GeneID:3191196;gbkey=Gene;locus_tag=FTT_0554
NC_006570.2	RefSeq	CDS	573210	573482	.	+	0	ID=cds496;Name=YP_169580.1;Parent=gene562;Note=Similar to Q99SH0 Hypothetical protein SAV2087 from Stafylococcus aureus %2897 aa%29. FASTA: opt: 243 Z-score: 331.6 E%28%29: 1.4e-10 Smith-Waterman score: 243%3B 45.455 identity in 77 aa overlap ORF ftt0554;Dbxref=InterPro:IPR003735,UniProtKB%2FTrEMBL:Q5NHB2,Genbank:YP_169580.1,GeneID:3191196;gbkey=CDS;product=hypothetical protein;protein_id=YP_169580.1;transl_table=11
NC_006570.2	RefSeq	gene	573496	574227	.	+	.	ID=gene563;Name=FTT_0555;Dbxref=GeneID:3191193;gbkey=Gene;locus_tag=FTT_0555
NC_006570.2	RefSeq	CDS	573496	574227	.	+	0	ID=cds497;Name=YP_169581.1;Parent=gene563;Note=Similar to Q930P5 Hypothetical protein RA0150 from Rhizobium meliloti %28262 aa%29. FASTA: opt: 924 Z-score: 1048.2 E%28%29: 1.7e-50 Smith-Waterman score: 924%3B 54.202 identity in 238 aa overlap. Some similarity to glutaredoxin ORF ftt0555;Dbxref=GOA:Q5NHB1,InterPro:IPR014025,UniProtKB%2FTrEMBL:Q5NHB1,Genbank:YP_169581.1,GeneID:3191193;gbkey=CDS;product=hypothetical protein;protein_id=YP_169581.1;transl_table=11
NC_006570.2	RefSeq	gene	574230	575099	.	-	.	ID=gene564;Name=oxyR;Dbxref=GeneID:3191225;gbkey=Gene;gene=oxyR;locus_tag=FTT_0556c
NC_006570.2	RefSeq	CDS	574230	575099	.	-	0	ID=cds498;Name=YP_169582.1;Parent=gene564;Note=Similar to O06466 Oxidative stress transcriptional regulator from Xanthomonas campestris %28313 aa%29. FASTA: opt: 707 Z-score: 842.2 E%28%29: 5.1e-39 Smith-Waterman score: 707%3B 36.207 identity in 290 aa overlap;Dbxref=GOA:Q5NHB0,InterPro:IPR011991,UniProtKB%2FTrEMBL:Q5NHB0,Genbank:YP_169582.1,GeneID:3191225;gbkey=CDS;product=oxidative stress transcriptional regulator;protein_id=YP_169582.1;transl_table=11
NC_006570.2	RefSeq	gene	575197	575721	.	+	.	ID=gene565;Name=FTT_0557;Dbxref=GeneID:3191195;gbkey=Gene;locus_tag=FTT_0557
NC_006570.2	RefSeq	CDS	575197	575721	.	+	0	ID=cds499;Name=YP_169583.1;Parent=gene565;Note=Similar to Q92MY1 Hypothetical protein R02467 from Rhizobium meliloti %28180 aa%29. FASTA: opt: 821 Z-score: 1055.0 E%28%29: 7.2e-51 Smith-Waterman score: 821%3B 66.092 identity in 174 aa overlap ORF ftt0557;Dbxref=GOA:Q5NHA9,InterPro:IPR017936,UniProtKB%2FTrEMBL:Q5NHA9,Genbank:YP_169583.1,GeneID:3191195;gbkey=CDS;product=AhpC%2FTSA family protein;protein_id=YP_169583.1;transl_table=11
NC_006570.2	RefSeq	gene	575724	576335	.	+	.	ID=gene566;Name=FTT_0558;Dbxref=GeneID:3191194;gbkey=Gene;locus_tag=FTT_0558
NC_006570.2	RefSeq	CDS	575724	576335	.	+	0	ID=cds500;Name=YP_169584.1;Parent=gene566;Note=Similar to Q8XU62 Hypothetical protein RSc3331 from Ralstonia solanacearum %28201 aa%29. FASTA: opt: 602 Z-score: 724.0 E%28%29: 2e-32 Smith-Waterman score: 602%3B 48.020 identity in 202 aa overlap ORF ftt0558;Dbxref=GOA:Q5NHA8,InterPro:IPR016040,UniProtKB%2FTrEMBL:Q5NHA8,Genbank:YP_169584.1,GeneID:3191194;gbkey=CDS;product=short chain dehydrogenase;protein_id=YP_169584.1;transl_table=11
NC_006570.2	RefSeq	gene	576352	577017	.	-	.	ID=gene567;Name=cmk;Dbxref=GeneID:3192510;gbkey=Gene;gene=cmk;locus_tag=FTT_0559c
NC_006570.2	RefSeq	CDS	576352	577017	.	-	0	ID=cds501;Name=YP_169585.1;Parent=gene567;Note=Similar to KCY_PASMU %28P57875%29 Cytidylate kinase from Pasteurella multocida %28227 aa%29. FASTA: opt: 748 Z-score: 879.9 E%28%29: 4.1e-41 Smith-Waterman score: 748%3B 53.425 identity in 219 aa overlap;Dbxref=GOA:Q5NHA7,InterPro:IPR011994,UniProtKB%2FTrEMBL:Q5NHA7,Genbank:YP_169585.1,GeneID:3192510;gbkey=CDS;product=cytidylate kinase;protein_id=YP_169585.1;transl_table=11
NC_006570.2	RefSeq	gene	577004	578056	.	-	.	ID=gene568;Name=serC;Dbxref=GeneID:3190960;gbkey=Gene;gene=serC;locus_tag=FTT_0560c
NC_006570.2	RefSeq	CDS	577004	578056	.	-	0	ID=cds502;Name=YP_169586.1;Parent=gene568;Note=catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate%3B required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine;Dbxref=GOA:Q5NHA6,InterPro:IPR015422,UniProtKB%2FTrEMBL:Q5NHA6,Genbank:YP_169586.1,GeneID:3190960;gbkey=CDS;product=phosphoserine aminotransferase;protein_id=YP_169586.1;transl_table=11
NC_006570.2	RefSeq	repeat_region	578312	578323	.	+	.	ID=id92;Note=ISFtu1 12bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	578324	578339	.	+	.	ID=id93;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	578340	578355	.	+	.	ID=id94;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;gbkey=repeat_region
NC_006570.2	RefSeq	gene	578376	579160	.	+	.	ID=gene569;Name=isftu1;Dbxref=GeneID:3190912;gbkey=Gene;gene=isftu1;locus_tag=FTT_0561
NC_006570.2	RefSeq	CDS	578376	578702	.	+	0	ID=cds503;Name=YP_169587.1;Parent=gene569;Note=ISFtu1. Transposase%2C member of the IS630 Tc-1 mariner family. Identical to Q93EJ6  transposase from Francisella tularensis %28118 aa%29 from aa 144-261. Identical to Q93EJ7  transposase from Francisella tularensis %28126 aa%29 from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF%27s. ORF1 %28identical to Q93EJ7%29 contains a programmed ribosomal frameshifting motif%2C 5%27-AAAAAAAG-3%27 at aa position 109 which permits frameshifting to ORF2 %28identical to Q93EJ6%29 to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family%2C and also mariner elements%2C show that this transposase shares strongly conserved residues%2C including a fully conserved dipeptide%2CAsp-Glu %28DE%29%2C and a block consisting of a fully conserved Asp and highly conserved Glu%2C separated by 34 or 35 residues %28D35E%29. The conserved dipeptide is only present if ribosomal frameshifting occurs.;Dbxref=UniProtKB%2FTrEMBL:Q5NIH2,Genbank:YP_169587.1,GeneID:3190912;gbkey=CDS;product=transposase;protein_id=YP_169587.1;transl_table=11
NC_006570.2	RefSeq	CDS	578702	579160	.	+	0	ID=cds503;Name=YP_169587.1;Parent=gene569;Note=ISFtu1. Transposase%2C member of the IS630 Tc-1 mariner family. Identical to Q93EJ6  transposase from Francisella tularensis %28118 aa%29 from aa 144-261. Identical to Q93EJ7  transposase from Francisella tularensis %28126 aa%29 from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF%27s. ORF1 %28identical to Q93EJ7%29 contains a programmed ribosomal frameshifting motif%2C 5%27-AAAAAAAG-3%27 at aa position 109 which permits frameshifting to ORF2 %28identical to Q93EJ6%29 to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family%2C and also mariner elements%2C show that this transposase shares strongly conserved residues%2C including a fully conserved dipeptide%2CAsp-Glu %28DE%29%2C and a block consisting of a fully conserved Asp and highly conserved Glu%2C separated by 34 or 35 residues %28D35E%29. The conserved dipeptide is only present if ribosomal frameshifting occurs.;Dbxref=UniProtKB%2FTrEMBL:Q5NIH2,Genbank:YP_169587.1,GeneID:3190912;gbkey=CDS;product=transposase;protein_id=YP_169587.1;transl_table=11
NC_006570.2	RefSeq	repeat_region	579248	579259	.	+	.	ID=id95;Note=ISFtu1 12bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	gene	579542	580663	.	+	.	ID=gene570;Name=potG;Dbxref=GeneID:3191563;gbkey=Gene;gene=potG;locus_tag=FTT_0562
NC_006570.2	RefSeq	CDS	579542	580663	.	+	0	ID=cds504;Name=YP_169588.1;Parent=gene570;Note=Similar to Q8EHF2 Polyamine ABC transporter%2C ATP-binding protein from Shewanella oneidensis %28378 aa%29. FASTA: opt: 1366 Z-score: 1557.5 E%28%29: 7.3e-79 Smith-Waterman score: 1366%3B 55.496 identity in 373 aa overlap;Dbxref=GOA:Q5NHA4,InterPro:IPR017871,UniProtKB%2FTrEMBL:Q5NHA4,Genbank:YP_169588.1,GeneID:3191563;gbkey=CDS;product=polyamine transporter%2C ABC transporter%2CATP-binding protein;protein_id=YP_169588.1;transl_table=11
NC_006570.2	RefSeq	gene	580627	581544	.	+	.	ID=gene571;Name=potH;Dbxref=GeneID:3190974;gbkey=Gene;gene=potH;locus_tag=FTT_0563
NC_006570.2	RefSeq	CDS	580627	581544	.	+	0	ID=cds505;Name=YP_169589.1;Parent=gene571;Note=Similar to Q8FJE8 Putrescine transport system permease protein from Escherichia coli %28314 aa%29. FASTA: opt: 949 Z-score: 1040.4 E%28%29: 4.7e-50 Smith-Waterman score: 949%3B 43.878 identity in 294 aa overlap;Dbxref=GOA:Q5NHA3,InterPro:IPR000515,UniProtKB%2FTrEMBL:Q5NHA3,Genbank:YP_169589.1,GeneID:3190974;gbkey=CDS;product=polyamine transporter%2C subunit H%2C ABC transporter%2C membrane protein;protein_id=YP_169589.1;transl_table=11
NC_006570.2	RefSeq	gene	581558	582364	.	+	.	ID=gene572;Name=potI;Dbxref=GeneID:3191478;gbkey=Gene;gene=potI;locus_tag=FTT_0564
NC_006570.2	RefSeq	CDS	581558	582364	.	+	0	ID=cds506;Name=YP_169590.1;Parent=gene572;Note=Similar to Q8EHF0 Polyamine ABC transporter%2C permease protein from Shewanella oneidensis %28271 aa%29. FASTA: opt: 873 Z-score: 1010.7 E%28%29: 2.1e-48 Smith-Waterman score: 873%3B 46.241 identity in 266 aa overlap;Dbxref=GOA:Q5NHA2,InterPro:IPR000515,UniProtKB%2FTrEMBL:Q5NHA2,Genbank:YP_169590.1,GeneID:3191478;gbkey=CDS;product=polyamine transporter%2C subunit I%2C ABC transporter%2C membrane protein;protein_id=YP_169590.1;transl_table=11
NC_006570.2	RefSeq	repeat_region	582482	582500	.	-	.	ID=id96;Note=ISFtu2 19bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	gene	582508	583251	.	-	.	ID=gene573;Name=isftu2;Dbxref=GeneID:3190925;gbkey=Gene;gene=isftu2;locus_tag=FTT_0565c
NC_006570.2	RefSeq	CDS	582508	583251	.	-	0	ID=cds507;Name=YP_169591.1;Parent=gene573;Note=ISFtu2. Transposase%2C member of the IS5 family. Identical to Q8GM03  transposase from Francisella tularensis %28247 aa%29.;Dbxref=GOA:Q8GM03,InterPro:IPR002559,UniProtKB%2FTrEMBL:Q8GM03,Genbank:YP_169591.1,GeneID:3190925;gbkey=CDS;product=transposase;protein_id=YP_169591.1;transl_table=11
NC_006570.2	RefSeq	repeat_region	583328	583346	.	-	.	ID=id97;Note=ISFtu2 19bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	gene	583397	583663	.	+	.	ID=gene574;Name=FTT_0566;Dbxref=GeneID:3191192;gbkey=Gene;locus_tag=FTT_0566
NC_006570.2	RefSeq	CDS	583397	583663	.	+	0	ID=cds508;Name=YP_169592.1;Parent=gene574;Note=ORF ftt0566;Dbxref=UniProtKB%2FTrEMBL:Q5NHA0,Genbank:YP_169592.1,GeneID:3191192;gbkey=CDS;product=hypothetical protein;protein_id=YP_169592.1;transl_table=11
NC_006570.2	RefSeq	gene	583792	585251	.	-	.	ID=gene575;Name=FTT_0567c;Dbxref=GeneID:3191191;gbkey=Gene;locus_tag=FTT_0567c;pseudo=true
NC_006570.2	RefSeq	gene	585869	586519	.	+	.	ID=gene576;Name=FTT_0568;Dbxref=GeneID:3191190;gbkey=Gene;locus_tag=FTT_0568
NC_006570.2	RefSeq	CDS	585869	586519	.	+	0	ID=cds509;Name=YP_169593.1;Parent=gene576;Note=Similar to Q26545 Phosphoserine phosphohydrolase-like protein trans-spliced from Schistosoma mansoni %28223 aa%29. FASTA: opt: 319 Z-score: 380.8 E%28%29: 2.5e-13 Smith-Waterman score: 319%3B 29.493 identity in 217 aa overlap. Similar to eukaryotic proteins. Historical HGT-event%3F ORF ftt0568;Dbxref=GOA:Q5NH99,InterPro:IPR005834,UniProtKB%2FTrEMBL:Q5NH99,Genbank:YP_169593.1,GeneID:3191190;gbkey=CDS;product=hypothetical protein;protein_id=YP_169593.1;transl_table=11
NC_006570.2	RefSeq	gene	586508	587530	.	-	.	ID=gene577;Name=FTT_0569c;Dbxref=GeneID:3191188;gbkey=Gene;locus_tag=FTT_0569c
NC_006570.2	RefSeq	CDS	586508	587530	.	-	0	ID=cds510;Name=YP_169594.1;Parent=gene577;Note=Similar to Q8P3T2 Integral membrane protein from Xanthomonas campestris %28347 aa%29. FASTA: opt: 906 Z-score: 1071.1 E%28%29: 9e-52 Smith-Waterman score: 906%3B 41.739 identity in 345 aa overlap ORF ftt0569c;Dbxref=InterPro:IPR007427,UniProtKB%2FTrEMBL:Q5NH98,Genbank:YP_169594.1,GeneID:3191188;gbkey=CDS;product=hypothetical protein;protein_id=YP_169594.1;transl_table=11
NC_006570.2	RefSeq	gene	587610	588008	.	+	.	ID=gene578;Name=FTT_0570;Dbxref=GeneID:3191186;gbkey=Gene;locus_tag=FTT_0570
NC_006570.2	RefSeq	CDS	587610	588008	.	+	0	ID=cds511;Name=YP_169595.1;Parent=gene578;Note=ORF ftt0570;Dbxref=UniProtKB%2FTrEMBL:Q5NH97,Genbank:YP_169595.1,GeneID:3191186;gbkey=CDS;product=hypothetical protein;protein_id=YP_169595.1;transl_table=11
NC_006570.2	RefSeq	gene	588020	588727	.	+	.	ID=gene579;Name=FTT_0571;Dbxref=GeneID:3191185;gbkey=Gene;locus_tag=FTT_0571
NC_006570.2	RefSeq	CDS	588020	588727	.	+	0	ID=cds512;Name=YP_169596.1;Parent=gene579;Note=Partially similar to Q96F61 Hypothetical protein from Homo sapiens %28409 aa%29. FASTA: opt: 403 Z-score: 516.3 E%28%29: 7.3e-21 Smith-Waterman score: 403%3B 34.171 identity in 199 aa overlap ORF ftt0571;Dbxref=GOA:Q5NH96,InterPro:IPR012335,UniProtKB%2FTrEMBL:Q5NH96,Genbank:YP_169596.1,GeneID:3191185;gbkey=CDS;product=hypothetical protein;protein_id=YP_169596.1;transl_table=11
NC_006570.2	RefSeq	gene	588852	590306	.	+	.	ID=gene580;Name=FTT_0572;Dbxref=GeneID:3191184;gbkey=Gene;locus_tag=FTT_0572
NC_006570.2	RefSeq	CDS	588852	590306	.	+	0	ID=cds513;Name=YP_169597.1;Parent=gene580;Note=Similar to Q8Z269  PTR2 family transport protein from Salmonella typhi %28489 aa%29. FASTA: opt: 729 Z-score: 778.1 E%28%29: 1.9e-35 Smith-Waterman score: 770%3B 30.524identity in 439 aa overlap ORF ftt0572;Dbxref=GOA:Q5NH95,InterPro:IPR005279,UniProtKB%2FTrEMBL:Q5NH95,Genbank:YP_169597.1,GeneID:3191184;gbkey=CDS;product=proton-dependent oligopeptide transport %28POT%29 family protein;protein_id=YP_169597.1;transl_table=11
NC_006570.2	RefSeq	gene	590357	591454	.	+	.	ID=gene581;Name=alr;Dbxref=GeneID:3192353;gbkey=Gene;gene=alr;locus_tag=FTT_0573
NC_006570.2	RefSeq	CDS	590357	591454	.	+	0	ID=cds514;Name=YP_169598.1;Parent=gene581;Note=Similar to Q81EB9 Alanine racemase from Bacillus cereus %28408 aa%29. FASTA: opt: 573 Z-score: 679.1 E%28%29: 6.2e-30 Smith-Waterman score: 573%3B 29.863 identity in 365 aa overlap;Dbxref=GOA:Q5NH94,InterPro:IPR011079,UniProtKB%2FSwiss-Prot:Q5NH94,Genbank:YP_169598.1,GeneID:3192353;gbkey=CDS;product=alanine racemase;protein_id=YP_169598.1;transl_table=11
NC_006570.2	RefSeq	gene	591567	593143	.	+	.	ID=gene582;Name=FTT_0574;Dbxref=GeneID:3191183;gbkey=Gene;locus_tag=FTT_0574;pseudo=true
NC_006570.2	RefSeq	gene	593229	594071	.	+	.	ID=gene583;Name=pheA;Dbxref=GeneID:3191368;gbkey=Gene;gene=pheA;locus_tag=FTT_0575
NC_006570.2	RefSeq	CDS	593229	594071	.	+	0	ID=cds515;Name=YP_169599.1;Parent=gene583;Note=Similar to Q8KBW6 Prephenate dehydratase from chlorobium tepidum %28280 aa%29. FASTA: opt: 624 Z-score: 792.7 E%28%29: 2.9e-36 Smith-Waterman score: 624%3B 38.489 identity in 278 aa overlap;Dbxref=GOA:Q5NH93,InterPro:IPR018528,UniProtKB%2FTrEMBL:Q5NH93,Genbank:YP_169599.1,GeneID:3191368;gbkey=CDS;product=prephenate dehydratase;protein_id=YP_169599.1;transl_table=11
NC_006570.2	RefSeq	gene	594097	594765	.	+	.	ID=gene584;Name=FTT_0576;Dbxref=GeneID:3191182;gbkey=Gene;locus_tag=FTT_0576
NC_006570.2	RefSeq	CDS	594097	594765	.	+	0	ID=cds516;Name=YP_169600.1;Parent=gene584;Note=Similar to Q894N2  zinc metallopeptidase from Clostridium tetani %28236 aa%29. FASTA: opt: 434 Z-score: 526.0 E%28%29: 2.1e-21 Smith-Waterman score: 434%3B 36.245 identity in 229 aa overlap ORF ftt0576;Dbxref=InterPro:IPR002725,UniProtKB%2FTrEMBL:Q5NH92,Genbank:YP_169600.1,GeneID:3191182;gbkey=CDS;product=hypothetical protein;protein_id=YP_169600.1;transl_table=11
NC_006570.2	RefSeq	gene	594821	596194	.	+	.	ID=gene585;Name=sdaA;Dbxref=GeneID:3192275;gbkey=Gene;gene=sdaA;locus_tag=FTT_0577
NC_006570.2	RefSeq	CDS	594821	596194	.	+	0	ID=cds517;Name=YP_169601.1;Parent=gene585;Note=Similar to Q8EEW4 L-serine dehydratase 1 from Shewanella oneidensis %28458 aa%29. FASTA: opt: 1442 Z-score: 1806.4 E%28%29: 1e-92 Smith-Waterman score: 1442%3B 48.922 identity in 464 aa overlap;Dbxref=GOA:Q5NH91,InterPro:IPR005131,UniProtKB%2FTrEMBL:Q5NH91,Genbank:YP_169601.1,GeneID:3192275;gbkey=CDS;product=L-serine dehydratase 1;protein_id=YP_169601.1;transl_table=11
NC_006570.2	RefSeq	gene	596297	597520	.	+	.	ID=gene586;Name=csdB;Dbxref=GeneID:3191895;gbkey=Gene;gene=csdB;locus_tag=FTT_0578
NC_006570.2	RefSeq	CDS	596297	597520	.	+	0	ID=cds518;Name=YP_169602.1;Parent=gene586;Note=Similar to Q8ZDZ4  selenocysteine lyase from Yersinia pestis %28406 aa%29. FASTA: opt: 1343 Z-score: 1645.0 E%28%29: 9.9e-84 Smith-Waterman score: 1343%3B 48.507 identity in 402 aa overlap;Dbxref=GOA:Q5NH90,InterPro:IPR015421,UniProtKB%2FTrEMBL:Q5NH90,Genbank:YP_169602.1,GeneID:3191895;gbkey=CDS;product=selenocysteine lyase;protein_id=YP_169602.1;transl_table=11
NC_006570.2	RefSeq	gene	597541	597897	.	+	.	ID=gene587;Name=FTT_0579;Dbxref=GeneID:3191180;gbkey=Gene;locus_tag=FTT_0579
NC_006570.2	RefSeq	CDS	597541	597897	.	+	0	ID=cds519;Name=YP_169603.1;Parent=gene587;Note=Similar to AAP95950 HesB family protein from Haemophilus ducreyi %28107 aa%29. FASTA: opt: 288 Z-score: 392.8 E%28%29: 5.5e-14 Smith-Waterman score: 288%3B 41.121 identity in 107 aa overlap ORF ftt0579;Dbxref=GOA:Q5NH89,InterPro:IPR016092,UniProtKB%2FTrEMBL:Q5NH89,Genbank:YP_169603.1,GeneID:3191180;gbkey=CDS;product=hesB family protein;protein_id=YP_169603.1;transl_table=11
NC_006570.2	RefSeq	gene	597911	598462	.	+	.	ID=gene588;Name=FTT_0580;Dbxref=GeneID:3191179;gbkey=Gene;locus_tag=FTT_0580
NC_006570.2	RefSeq	CDS	597911	598462	.	+	0	ID=cds520;Name=YP_169604.1;Parent=gene588;Note=Similar to Q83BY3 Hypothetical protein from Coxiella burnetii %28180 aa%29. FASTA: opt: 593 Z-score: 750.6 E%28%29: 6.4e-34 Smith-Waterman score: 593%3B 48.045 identity in 179 aa overlap ORF ftt0580;Dbxref=InterPro:IPR017776,UniProtKB%2FTrEMBL:Q5NH88,Genbank:YP_169604.1,GeneID:3191179;gbkey=CDS;product=hypothetical protein;protein_id=YP_169604.1;transl_table=11
NC_006570.2	RefSeq	gene	598474	598962	.	+	.	ID=gene589;Name=coaD;Dbxref=GeneID:3192516;gbkey=Gene;gene=coaD;locus_tag=FTT_0581
NC_006570.2	RefSeq	CDS	598474	598962	.	+	0	ID=cds521;Name=YP_169605.1;Parent=gene589;Note=Catalyzes the conversion of ATP and pantetheine 4%27-phosphate to diphosphate and 3%27-dephospho-coA;Dbxref=GOA:Q5NH87,InterPro:IPR014729,UniProtKB%2FSwiss-Prot:Q5NH87,Genbank:YP_169605.1,GeneID:3192516;gbkey=CDS;product=phosphopantetheine adenylyltransferase;protein_id=YP_169605.1;transl_table=11
NC_006570.2	RefSeq	gene	598967	599212	.	+	.	ID=gene590;Name=fdx;Dbxref=GeneID:3191881;gbkey=Gene;gene=fdx;locus_tag=FTT_0582
NC_006570.2	RefSeq	CDS	598967	599212	.	+	0	ID=cds522;Name=YP_169606.1;Parent=gene590;Note=ferredoxin. Identical to Q47937 Ferredoxin from Francisella novicida. Similar to Q88AH4 Ferredoxin from pseudomonas syringae %2883 aa%29. FASTA: opt: 431 Z-score: 563.2 E%28%29: 1.8e-23 Smith-Waterman score: 431%3B 65.432 identity in 81 aa overlap;Dbxref=GOA:Q5NH86,InterPro:IPR017900,UniProtKB%2FTrEMBL:Q5NH86,Genbank:YP_169606.1,GeneID:3191881;gbkey=CDS;product=ferredoxin;protein_id=YP_169606.1;transl_table=11
NC_006570.2	RefSeq	gene	599319	600500	.	+	.	ID=gene591;Name=fopA1;Dbxref=GeneID:3192005;gbkey=Gene;gene=fopA1;locus_tag=FTT_0583
NC_006570.2	RefSeq	CDS	599319	600500	.	+	0	ID=cds523;Name=YP_169607.1;Parent=gene591;Note=No transmembrane helix predicted.;Dbxref=GOA:Q5NH85,InterPro:IPR011250,UniProtKB%2FTrEMBL:Q5NH85,Genbank:YP_169607.1,GeneID:3192005;gbkey=CDS;product=outer membrane associated protein;protein_id=YP_169607.1;transl_table=11
NC_006570.2	RefSeq	gene	601162	604533	.	+	.	ID=gene592;Name=FTT_0584;Dbxref=GeneID:3191177;gbkey=Gene;locus_tag=FTT_0584
NC_006570.2	RefSeq	CDS	601162	604533	.	+	0	ID=cds524;Name=YP_169608.1;Parent=gene592;Note=ORF ftt0584;Dbxref=InterPro:IPR018525,UniProtKB%2FTrEMBL:Q5NH84,Genbank:YP_169608.1,GeneID:3191177;gbkey=CDS;product=hypothetical protein;protein_id=YP_169608.1;transl_table=11
NC_006570.2	RefSeq	gene	604514	605469	.	+	.	ID=gene593;Name=FTT_0585;Dbxref=GeneID:3191176;gbkey=Gene;locus_tag=FTT_0585;pseudo=true
NC_006570.2	RefSeq	gene	605902	606480	.	+	.	ID=gene594;Name=FTT_0586;Dbxref=GeneID:3191175;gbkey=Gene;locus_tag=FTT_0586
NC_006570.2	RefSeq	CDS	605902	606480	.	+	0	ID=cds525;Name=YP_169609.1;Parent=gene594;Note=Similar to Q9YCL9 Hypothetical protein APE1239 from Aeropyrum pernix %28221 aa%29. FASTA: opt: 238 Z-score: 303.8 E%28%29: 5e-09 Smith-Waterman score: 238%3B 25.683 identity in 183 aa overlap. Weakly conserved. ORF ftt0586;Dbxref=InterPro:IPR013343,UniProtKB%2FTrEMBL:Q5NH83,Genbank:YP_169609.1,GeneID:3191175;gbkey=CDS;product=hypothetical protein;protein_id=YP_169609.1;transl_table=11
NC_006570.2	RefSeq	repeat_region	606878	606896	.	-	.	ID=id98;Note=ISFtu2 19bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	gene	606904	607647	.	-	.	ID=gene595;Name=isftu2;Dbxref=GeneID:3190840;gbkey=Gene;gene=isftu2;locus_tag=FTT_0587c
NC_006570.2	RefSeq	CDS	606904	607647	.	-	0	ID=cds526;Name=YP_169610.1;Parent=gene595;Note=ISFtu2. Transposase%2C member of the IS5 family. Identical to Q8GM03  transposase from Francisella tularensis %28247 aa%29.;Dbxref=GOA:Q8GM03,InterPro:IPR002559,UniProtKB%2FTrEMBL:Q8GM03,Genbank:YP_169610.1,GeneID:3190840;gbkey=CDS;product=transposase;protein_id=YP_169610.1;transl_table=11
NC_006570.2	RefSeq	repeat_region	607724	607742	.	-	.	ID=id99;Note=ISFtu2 19bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	gene	607810	609087	.	+	.	ID=gene596;Name=aroA;Dbxref=GeneID:3191078;gbkey=Gene;gene=aroA;locus_tag=FTT_0588
NC_006570.2	RefSeq	CDS	607810	609087	.	+	0	ID=cds527;Name=YP_169611.1;Parent=gene596;Note=Similar to AROA_VIBPA %28Q87QX9%29 3-phosphoshikimate 1-carboxyvinyltransferase from Vibrio parahaemolyticus %28426 aa%29. FASTA: opt: 928 Z-score: 1157.4 E%28%29: 1.4e-56 Smith-Waterman score: 928%3B 36.916 identity in 428 aa overlap;Dbxref=GOA:Q5NH81,InterPro:IPR016228,UniProtKB%2FTrEMBL:Q5NH81,Genbank:YP_169611.1,GeneID:3191078;gbkey=CDS;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=YP_169611.1;transl_table=11
NC_006570.2	RefSeq	gene	609090	609680	.	+	.	ID=gene597;Name=FTT_0589;Dbxref=GeneID:3191174;gbkey=Gene;locus_tag=FTT_0589
NC_006570.2	RefSeq	CDS	609090	609680	.	+	0	ID=cds528;Name=YP_169612.1;Parent=gene597;Note=ORF ftt0589;Dbxref=UniProtKB%2FTrEMBL:Q5NH80,Genbank:YP_169612.1,GeneID:3191174;gbkey=CDS;product=hypothetical protein;protein_id=YP_169612.1;transl_table=11
NC_006570.2	RefSeq	gene	609631	610113	.	+	.	ID=gene598;Name=rnhA;Dbxref=GeneID:3191605;gbkey=Gene;gene=rnhA;locus_tag=FTT_0590
NC_006570.2	RefSeq	CDS	609631	610113	.	+	0	ID=cds529;Name=YP_169613.1;Parent=gene598;Note=Similar to RNH_PSEAE %28Q9I2S9%29 Ribonuclease H from Pseudomonas aeruginosa %28148 aa%29. FASTA: opt: 673 Z-score: 830.4 E%28%29: 2.3e-38 Smith-Waterman score: 673%3B 62.937 identity in 143 aa overlap;Dbxref=GOA:Q5NH79,InterPro:IPR002156,UniProtKB%2FTrEMBL:Q5NH79,Genbank:YP_169613.1,GeneID:3191605;gbkey=CDS;product=ribonuclease H;protein_id=YP_169613.1;transl_table=11
NC_006570.2	RefSeq	gene	610115	611152	.	+	.	ID=gene599;Name=ansA;Dbxref=GeneID:3192357;gbkey=Gene;gene=ansA;locus_tag=FTT_0591
NC_006570.2	RefSeq	CDS	610115	611152	.	+	0	ID=cds530;Name=YP_169614.1;Parent=gene599;Note=Similar to Q8EEG1 L-asparaginase I from Shewanella oneidensis %28337 aa%29. FASTA: opt: 1041 Z-score: 1293.4 E%28%29: 3.7e-64 Smith-Waterman score: 1041%3B 49.258identity in 337 aa overlap;Dbxref=GOA:Q5NH78,InterPro:IPR006034,UniProtKB%2FTrEMBL:Q5NH78,Genbank:YP_169614.1,GeneID:3192357;gbkey=CDS;product=L-asparaginase;protein_id=YP_169614.1;transl_table=11
NC_006570.2	RefSeq	gene	611223	611909	.	+	.	ID=gene600;Name=cynT;Dbxref=GeneID:3191916;gbkey=Gene;gene=cynT;locus_tag=FTT_0592
NC_006570.2	RefSeq	CDS	611223	611909	.	+	0	ID=cds531;Name=YP_169615.1;Parent=gene600;Note=Similar to Q87AM3 Carbonic anhydrase from xylella fastidiosa %28220 aa%29. FASTA: opt: 577 Z-score: 733.9 E%28%29: 5.5e-33 Smith-Waterman score: 722%3B 45.536 identity in 224 aa overlap;Dbxref=GOA:Q5NH77,InterPro:IPR015892,UniProtKB%2FTrEMBL:Q5NH77,Genbank:YP_169615.1,GeneID:3191916;gbkey=CDS;product=carbonic anhydrase;protein_id=YP_169615.1;transl_table=11
NC_006570.2	RefSeq	gene	612196	612801	.	-	.	ID=gene601;Name=FTT_0593c;Dbxref=GeneID:3191172;gbkey=Gene;locus_tag=FTT_0593c
NC_006570.2	RefSeq	CDS	612196	612801	.	-	0	ID=cds532;Name=YP_169616.1;Parent=gene601;Note=ORF ftt0593c;Dbxref=UniProtKB%2FTrEMBL:Q5NH76,Genbank:YP_169616.1,GeneID:3191172;gbkey=CDS;product=hypothetical protein;protein_id=YP_169616.1;transl_table=11
NC_006570.2	RefSeq	gene	612865	613737	.	-	.	ID=gene602;Name=FTT_0594c;Dbxref=GeneID:3191171;gbkey=Gene;locus_tag=FTT_0594c
NC_006570.2	RefSeq	CDS	612865	613737	.	-	0	ID=cds533;Name=YP_169617.1;Parent=gene602;Note=Similar to Q87N89 Hypothetical protein from Vibrio parahaemolyticus %28344 aa%29. FASTA: opt: 706 Z-score: 859.6 E%28%29: 5.5e-40 Smith-Waterman score: 706%3B 42.160 identity in 287 aa overlap ORF ftt0594c;Dbxref=GOA:Q5NH75,UniProtKB%2FTrEMBL:Q5NH75,Genbank:YP_169617.1,GeneID:3191171;gbkey=CDS;product=hypothetical protein;protein_id=YP_169617.1;transl_table=11
NC_006570.2	RefSeq	gene	613746	613916	.	-	.	ID=gene603;Name=rubA;Dbxref=GeneID:3191088;gbkey=Gene;gene=rubA;locus_tag=FTT_0595c
NC_006570.2	RefSeq	CDS	613746	613916	.	-	0	ID=cds534;Name=YP_169618.1;Parent=gene603;Note=Similar to Q88C68 Rubredoxin from Pseudomonas putida %2855 aa%29. FASTA: opt: 334 Z-score: 465.9 E%28%29: 4.6e-18 Smith-Waterman score: 334%3B 78.431 identity in 51 aa overlap;Dbxref=GOA:Q5NH74,InterPro:IPR018527,UniProtKB%2FTrEMBL:Q5NH74,Genbank:YP_169618.1,GeneID:3191088;gbkey=CDS;product=rubredoxin;protein_id=YP_169618.1;transl_table=11
NC_006570.2	RefSeq	gene	614003	614620	.	-	.	ID=gene604;Name=FTT_0596c;Dbxref=GeneID:3191170;gbkey=Gene;locus_tag=FTT_0596c
NC_006570.2	RefSeq	CDS	614003	614620	.	-	0	ID=cds535;Name=YP_169619.1;Parent=gene604;Note=ORF ftt0596c;Dbxref=UniProtKB%2FTrEMBL:Q5NH73,Genbank:YP_169619.1,GeneID:3191170;gbkey=CDS;product=hypothetical protein;protein_id=YP_169619.1;transl_table=11
NC_006570.2	RefSeq	gene	614732	616126	.	+	.	ID=gene605;Name=FTT_0597;Dbxref=GeneID:3191169;gbkey=Gene;locus_tag=FTT_0597
NC_006570.2	RefSeq	CDS	614732	616126	.	+	0	ID=cds536;Name=YP_169620.1;Parent=gene605;Note=Similar to Q9K5Z6 Hypothetical UPF0061 protein BH393 from Bacillus halodurans %28492 aa%29. FASTA: opt: 1251 Z-score: 1519.2 E%28%29: 1e-76 Smith-Waterman score: 1357%3B 48.233 identity in 481 aa overlap ORF ftt0597;Dbxref=InterPro:IPR003846,UniProtKB%2FTrEMBL:Q5NH72,Genbank:YP_169620.1,GeneID:3191169;gbkey=CDS;product=hypothetical protein;protein_id=YP_169620.1;transl_table=11
NC_006570.2	RefSeq	gene	616158	617438	.	-	.	ID=gene606;Name=FTT_0598c;Dbxref=GeneID:3191168;gbkey=Gene;locus_tag=FTT_0598c
NC_006570.2	RefSeq	CDS	616158	617438	.	-	0	ID=cds537;Name=YP_169621.1;Parent=gene606;Note=Similar to Q8XLU3 Probable transmembrane symporter from Clostridium perfringens %28435 aa%29. FASTA: opt: 881 Z-score: 961.9 E%28%29: 1.1e-45 Smith-Waterman score: 881%3B 33.721identity in 430 aa overlap ORF ftt0598c;Dbxref=GOA:Q5NH71,InterPro:IPR001991,UniProtKB%2FTrEMBL:Q5NH71,Genbank:YP_169621.1,GeneID:3191168;gbkey=CDS;product=Sodium-dicarboxylate symporter family protein;protein_id=YP_169621.1;transl_table=11
NC_006570.2	RefSeq	gene	617634	618662	.	+	.	ID=gene607;Name=FTT_0599;Dbxref=GeneID:3191165;gbkey=Gene;locus_tag=FTT_0599
NC_006570.2	RefSeq	CDS	617634	618662	.	+	0	ID=cds538;Name=YP_169622.1;Parent=gene607;Note=Similar to Q9AAR1 SIS domain protein from Caulobacter crescentus %28358 aa%29. FASTA: opt: 864 Z-score: 1052.1 E%28%29: 1e-50 Smith-Waterman score: 864%3B 42.353 identity in 340 aa overlap.  Glucosamine-fructose-6-phosphate aminotransferase ORF ftt0599;Dbxref=GOA:Q5NH70,InterPro:IPR001347,UniProtKB%2FTrEMBL:Q5NH70,Genbank:YP_169622.1,GeneID:3191165;gbkey=CDS;product=SIS domain-containing protein;protein_id=YP_169622.1;transl_table=11
NC_006570.2	RefSeq	gene	618687	620092	.	+	.	ID=gene608;Name=FTT_0600;Dbxref=GeneID:3191166;gbkey=Gene;locus_tag=FTT_0600;pseudo=true
NC_006570.2	RefSeq	gene	620247	620366	.	+	.	ID=gene609;Name=FTT_0601;Dbxref=GeneID:3191164;gbkey=Gene;locus_tag=FTT_0601
NC_006570.2	RefSeq	CDS	620247	620366	.	+	0	ID=cds539;Name=YP_169623.1;Parent=gene609;Note=ORF ftt0601;Dbxref=UniProtKB%2FTrEMBL:Q5NH69,Genbank:YP_169623.1,GeneID:3191164;gbkey=CDS;product=hypothetical protein;protein_id=YP_169623.1;transl_table=11
NC_006570.2	RefSeq	gene	620993	622471	.	-	.	ID=gene610;Name=FTT_0602c;Dbxref=GeneID:3191163;gbkey=Gene;locus_tag=FTT_0602c
NC_006570.2	RefSeq	CDS	620993	622471	.	-	0	ID=cds540;Name=YP_169624.1;Parent=gene610;Note=ORF ftt0602c;Dbxref=UniProtKB%2FTrEMBL:Q5NH68,Genbank:YP_169624.1,GeneID:3191163;gbkey=CDS;product=hypothetical protein;protein_id=YP_169624.1;transl_table=11
NC_006570.2	RefSeq	gene	623031	623210	.	+	.	ID=gene611;Name=FTT_0603;Dbxref=GeneID:3191162;gbkey=Gene;locus_tag=FTT_0603
NC_006570.2	RefSeq	CDS	623031	623210	.	+	0	ID=cds541;Name=YP_169625.1;Parent=gene611;Note=ORF ftt0603;Dbxref=UniProtKB%2FTrEMBL:Q5NH67,Genbank:YP_169625.1,GeneID:3191162;gbkey=CDS;product=hypothetical protein;protein_id=YP_169625.1;transl_table=11
NC_006570.2	RefSeq	gene	623728	624162	.	+	.	ID=gene612;Name=FTT_0604;Dbxref=GeneID:3191159;gbkey=Gene;locus_tag=FTT_0604
NC_006570.2	RefSeq	CDS	623728	624162	.	+	0	ID=cds542;Name=YP_169626.1;Parent=gene612;Note=Similar to Q9CNR2 NhaP NA%2B%2FH%2B antiporter Conserved hypothetical membrane protein from Pasteurella multocida %28441 aa%29. FASTA: opt: 315 Z-score: 391.3 E%28%29: 6.6e-14 Smith-Waterman score: 315%3B 39.850 identity in 133 aa overlap. Matches to a central part of an Nhap protein ORF ftt0604;Dbxref=GOA:Q5NH66,InterPro:IPR006153,UniProtKB%2FTrEMBL:Q5NH66,Genbank:YP_169626.1,GeneID:3191159;gbkey=CDS;product=hypothetical protein;protein_id=YP_169626.1;transl_table=11
NC_006570.2	RefSeq	gene	624348	624536	.	-	.	ID=gene613;Name=FTT_0605c;Dbxref=GeneID:3191160;gbkey=Gene;locus_tag=FTT_0605c
NC_006570.2	RefSeq	CDS	624348	624536	.	-	0	ID=cds543;Name=YP_169627.1;Parent=gene613;Note=ORF ftt0605c;Dbxref=UniProtKB%2FTrEMBL:Q5NH65,Genbank:YP_169627.1,GeneID:3191160;gbkey=CDS;product=hypothetical protein;protein_id=YP_169627.1;transl_table=11
NC_006570.2	RefSeq	gene	624537	625240	.	-	.	ID=gene614;Name=FTT_0606c;Dbxref=GeneID:3191156;gbkey=Gene;locus_tag=FTT_0606c;pseudo=true
NC_006570.2	RefSeq	gene	625340	626557	.	+	.	ID=gene615;Name=ispG;Dbxref=GeneID:3190876;gbkey=Gene;gene=ispG;locus_tag=FTT_0607
NC_006570.2	RefSeq	CDS	625340	626557	.	+	0	ID=cds544;Name=YP_169628.1;Parent=gene615;Note=catalyzes the conversion of 2C-methyl-D-erythritol 2%2C4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate%3B involved in isoprenoid synthesis;Dbxref=GOA:Q5NH64,InterPro:IPR016425,UniProtKB%2FSwiss-Prot:Q5NH64,Genbank:YP_169628.1,GeneID:3190876;gbkey=CDS;product=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;protein_id=YP_169628.1;transl_table=11
NC_006570.2	RefSeq	gene	626572	627150	.	+	.	ID=gene616;Name=FTT_0608;Dbxref=GeneID:3191157;gbkey=Gene;locus_tag=FTT_0608
NC_006570.2	RefSeq	CDS	626572	627150	.	+	0	ID=cds545;Name=YP_169629.1;Parent=gene616;Note=Similar to Q9KHC2 Hypothetical 27.0 kDa protein from secondary endosymbiont of Glycaspis brimblecombei %28244 aa%29. FASTA: opt: 467 Z-score: 605.3 E%28%29: 8e-26 Smith-Waterman score: 467%3B 44.751identity in 181 aa overlap ORF ftt0608;Dbxref=InterPro:IPR003730,UniProtKB%2FTrEMBL:Q5NH63,Genbank:YP_169629.1,GeneID:3191157;gbkey=CDS;product=hypothetical protein;protein_id=YP_169629.1;transl_table=11
NC_006570.2	RefSeq	gene	627301	629094	.	+	.	ID=gene617;Name=FTT_0609;Dbxref=GeneID:3191155;gbkey=Gene;locus_tag=FTT_0609
NC_006570.2	RefSeq	CDS	627301	629094	.	+	0	ID=cds546;Name=YP_169630.1;Parent=gene617;Note=Similar to Q83F75 Peptidase%2C M24 family protein from Coxiella burnetii %28597 aa%29. FASTA: opt: 1665 Z-score: 1963.9 E%28%29: 1.7e-101 Smith-Waterman score: 1665%3B 45.286 identity in 594 aa overlap ORF ftt0609;Dbxref=GOA:Q5NH62,InterPro:IPR000994,UniProtKB%2FTrEMBL:Q5NH62,Genbank:YP_169630.1,GeneID:3191155;gbkey=CDS;product=peptidase%2C M24 family protein;protein_id=YP_169630.1;transl_table=11
NC_006570.2	RefSeq	gene	629192	630256	.	+	.	ID=gene618;Name=FTT_0610;Dbxref=GeneID:3191154;gbkey=Gene;locus_tag=FTT_0610
NC_006570.2	RefSeq	CDS	629192	630256	.	+	0	ID=cds547;Name=YP_169631.1;Parent=gene618;Note=Similar to Q8DFB3 DNA%2FRNA endonuclease G from Vibrio vulnificus %28247 aa%29. FASTA: opt: 682 Z-score: 838.7 E%28%29: 8e-39 Smith-Waterman score: 682%3B 46.311 identity in 244 aa overlap ORF ftt0610;Dbxref=GOA:Q5NH61,InterPro:IPR018524,UniProtKB%2FTrEMBL:Q5NH61,Genbank:YP_169631.1,GeneID:3191154;gbkey=CDS;product=DNA%2FRNA endonuclease family protein;protein_id=YP_169631.1;transl_table=11
NC_006570.2	RefSeq	gene	630247	631110	.	-	.	ID=gene619;Name=FTT_0611c;Dbxref=GeneID:3191153;gbkey=Gene;locus_tag=FTT_0611c
NC_006570.2	RefSeq	CDS	630247	631110	.	-	0	ID=cds548;Name=YP_169632.1;Parent=gene619;Note=Similar to Q9L6I3 Extended-spectrum beta-lactamase BES-1 from Serratia marcescens %28292 aa%29.FASTA: opt: 621 Z-score: 723.1 E%28%29: 2.2e-32 Smith-Waterman score: 621%3B 34.397 identity in 282 aa overlap ORF ftt0611c;Dbxref=GOA:Q5NH60,InterPro:IPR001466,UniProtKB%2FTrEMBL:Q5NH60,Genbank:YP_169632.1,GeneID:3191153;gbkey=CDS;product=beta-lactamase;protein_id=YP_169632.1;transl_table=11
NC_006570.2	RefSeq	gene	631546	632358	.	+	.	ID=gene620;Name=FTT_0612;Dbxref=GeneID:3191152;gbkey=Gene;locus_tag=FTT_0612
NC_006570.2	RefSeq	CDS	631546	632358	.	+	0	ID=cds549;Name=YP_169633.1;Parent=gene620;Note=ORF ftt0612;Dbxref=UniProtKB%2FTrEMBL:Q5NH59,Genbank:YP_169633.1,GeneID:3191152;gbkey=CDS;product=hypothetical protein;protein_id=YP_169633.1;transl_table=11
NC_006570.2	RefSeq	gene	632679	633098	.	-	.	ID=gene621;Name=FTT_0613c;Dbxref=GeneID:3191151;gbkey=Gene;locus_tag=FTT_0613c
NC_006570.2	RefSeq	CDS	632679	633098	.	-	0	ID=cds550;Name=YP_169634.1;Parent=gene621;Note=This ORF is longer. ORF ftt0613c;Dbxref=InterPro:IPR010694,UniProtKB%2FTrEMBL:Q5NH58,Genbank:YP_169634.1,GeneID:3191151;gbkey=CDS;product=hypothetical protein;protein_id=YP_169634.1;transl_table=11
NC_006570.2	RefSeq	gene	633344	634834	.	-	.	ID=gene622;Name=FTT_0614c;Dbxref=GeneID:3191149;gbkey=Gene;locus_tag=FTT_0614c
NC_006570.2	RefSeq	CDS	633344	634834	.	-	0	ID=cds551;Name=YP_169635.1;Parent=gene622;Note=Similar to Q820B4 Apolipoprotein N-acyltransferase from Coxiella burnetii %28485 aa%29. FASTA: opt: 984 Z-score: 1082.0 E%28%29: 2.2e-52 Smith-Waterman score: 984%3B 35.903 identity in 493 aa overlap ORF ftt0614c;Dbxref=GOA:Q5NH57,InterPro:IPR004563,UniProtKB%2FTrEMBL:Q5NH57,Genbank:YP_169635.1,GeneID:3191149;gbkey=CDS;product=apolipoprotein N-acyltransferase;protein_id=YP_169635.1;transl_table=11
NC_006570.2	RefSeq	gene	634834	635694	.	-	.	ID=gene623;Name=FTT_0615c;Dbxref=GeneID:3191148;gbkey=Gene;locus_tag=FTT_0615c
NC_006570.2	RefSeq	CDS	634834	635694	.	-	0	ID=cds552;Name=YP_169636.1;Parent=gene623;Note=Similar to Q8EHP0 Magnesium and cobalt efflux protein CorC from Shewanella oneidensis %28291 aa%29. FASTA: opt: 676 Z-score: 772.4 E%28%29: 3.9e-35 Smith-Waterman score: 676%3B 39.847 identity in 261 aa overlap ORF ftt0615c;Dbxref=InterPro:IPR005170,UniProtKB%2FTrEMBL:Q5NH56,Genbank:YP_169636.1,GeneID:3191148;gbkey=CDS;product=metal ion transporter protein;protein_id=YP_169636.1;transl_table=11
NC_006570.2	RefSeq	gene	635666	636172	.	-	.	ID=gene624;Name=FTT_0616c;Dbxref=GeneID:3191147;gbkey=Gene;locus_tag=FTT_0616c
NC_006570.2	RefSeq	CDS	635666	636172	.	-	0	ID=cds553;Name=YP_169637.1;Parent=gene624;Note=Similar to Q8EHN9 Hypothetical UPF0054 protein SO117 from Shewanella oneidensis %28153 aa%29. FATSA: opt: 433 Z-score: 547.4 E%28%29: 1.3e-22 Smith-Waterman score: 433%3B 44.025identity in 159 aa overlap ORF ftt0616c;Dbxref=GOA:Q5NH55,InterPro:IPR002036,UniProtKB%2FSwiss-Prot:Q5NH55,Genbank:YP_169637.1,GeneID:3191147;gbkey=CDS;product=hypothetical protein;protein_id=YP_169637.1;transl_table=11
NC_006570.2	RefSeq	gene	636147	637130	.	-	.	ID=gene625;Name=phoH;Dbxref=GeneID:3191788;gbkey=Gene;gene=phoH;locus_tag=FTT_0617c
NC_006570.2	RefSeq	CDS	636147	637130	.	-	0	ID=cds554;Name=YP_169638.1;Parent=gene625;Note=Simliar to Q87VY0 PhoH-like protein from Pseudomonas syringae %28340 aa%29. FASTA: opt: 1132 Z-score: 1306.4 E%28%29: 7.1e-65 Smith-Waterman score: 1132%3B 52.923 identity in 325 aa overlap;Dbxref=GOA:Q5NH54,InterPro:IPR003714,UniProtKB%2FTrEMBL:Q5NH54,Genbank:YP_169638.1,GeneID:3191788;gbkey=CDS;product=phoH-like protein;protein_id=YP_169638.1;transl_table=11
NC_006570.2	RefSeq	gene	637149	638477	.	-	.	ID=gene626;Name=yleA;Dbxref=GeneID:3192397;gbkey=Gene;gene=yleA;locus_tag=FTT_0618c
NC_006570.2	RefSeq	CDS	637149	638477	.	-	0	ID=cds555;Name=YP_169639.1;Parent=gene626;Note=catalyzes the formation of 2-methylthio-N6-%28dimethylallyl%29adenosine %28ms%282%29i%286%29A%29 at position 37 in tRNAs that read codons beginning with uridine from N6-%28dimethylallyl%29adenosine %28i%286%29A%29;Dbxref=GOA:Q5NH53,InterPro:IPR013848,UniProtKB%2FSwiss-Prot:Q5NH53,Genbank:YP_169639.1,GeneID:3192397;gbkey=CDS;product=%28dimethylallyl%29adenosine tRNA methylthiotransferase;protein_id=YP_169639.1;transl_table=11
NC_006570.2	RefSeq	gene	638700	639374	.	+	.	ID=gene627;Name=FTT_0619;Dbxref=GeneID:3191146;gbkey=Gene;locus_tag=FTT_0619
NC_006570.2	RefSeq	CDS	638700	639374	.	+	0	ID=cds556;Name=YP_169640.1;Parent=gene627;Note=Similar to O67476 O-methyltransferase from Aquifex aeolicus %28212 aa%29. FASTA: opt: 382 Z-score: 477.6 E%28%29: 1e-18 Smith-Waterman score: 382%3B 33.495 identity in 206 aa overlap. ORF ftt0619;Dbxref=GOA:Q5NH52,InterPro:IPR002935,UniProtKB%2FTrEMBL:Q5NH52,Genbank:YP_169640.1,GeneID:3191146;gbkey=CDS;product=o-methyltransferase family protein;protein_id=YP_169640.1;transl_table=11
NC_006570.2	RefSeq	gene	639383	640126	.	+	.	ID=gene628;Name=FTT_0620;Dbxref=GeneID:3191144;gbkey=Gene;locus_tag=FTT_0620
NC_006570.2	RefSeq	CDS	639383	640126	.	+	0	ID=cds557;Name=YP_169641.1;Parent=gene628;Note=Similar to Q8PER3 Acid phosphatase from Xanthomonas axonopodis %28310 aa%29. FASTA: opt: 238 Z-score: 293.2 E%28%29: 1.9e-08 Smith-Waterman score: 238%3B 24.583 identity in 240 aa overlap. ORF ftt0620;Dbxref=GOA:Q5NH51,InterPro:IPR005519,UniProtKB%2FTrEMBL:Q5NH51,Genbank:YP_169641.1,GeneID:3191144;gbkey=CDS;product=HAD superfamily protein;protein_id=YP_169641.1;transl_table=11
NC_006570.2	RefSeq	gene	640142	640735	.	+	.	ID=gene629;Name=tdk;Dbxref=GeneID:3190754;gbkey=Gene;gene=tdk;locus_tag=FTT_0621
NC_006570.2	RefSeq	CDS	640142	640735	.	+	0	ID=cds558;Name=YP_169642.1;Parent=gene629;Note=catalyzes the formation of thymidine 5%27-phosphate from thymidine;Dbxref=GOA:Q5NH50,InterPro:IPR001267,UniProtKB%2FSwiss-Prot:Q5NH50,Genbank:YP_169642.1,GeneID:3190754;gbkey=CDS;product=thymidine kinase;protein_id=YP_169642.1;transl_table=11
NC_006570.2	RefSeq	gene	640778	641242	.	-	.	ID=gene630;Name=FTT_0622c;Dbxref=GeneID:3191145;gbkey=Gene;locus_tag=FTT_0622c
NC_006570.2	RefSeq	CDS	640778	641242	.	-	0	ID=cds559;Name=YP_169643.1;Parent=gene630;Note=ORF ftt0622c;Dbxref=UniProtKB%2FTrEMBL:Q5NH49,Genbank:YP_169643.1,GeneID:3191145;gbkey=CDS;product=hypothetical protein;protein_id=YP_169643.1;transl_table=11
NC_006570.2	RefSeq	gene	641397	642713	.	+	.	ID=gene631;Name=tig;Dbxref=GeneID:3190785;gbkey=Gene;gene=tig;locus_tag=FTT_0623
NC_006570.2	RefSeq	CDS	641397	642713	.	+	0	ID=cds560;Name=YP_169644.1;Parent=gene631;Note=Tig%3B RopA%3B peptidyl-prolyl cis%2Ftrans isomerase%3B promotes folding of newly synthesized proteins%3B binds ribosomal 50S subunit%3B forms a homodimer;Dbxref=GOA:Q5NH48,InterPro:IPR008881,UniProtKB%2FSwiss-Prot:Q5NH48,Genbank:YP_169644.1,GeneID:3190785;gbkey=CDS;product=trigger factor;protein_id=YP_169644.1;transl_table=11
NC_006570.2	RefSeq	gene	642739	643344	.	+	.	ID=gene632;Name=clpP;Dbxref=GeneID:3192361;gbkey=Gene;gene=clpP;locus_tag=FTT_0624
NC_006570.2	RefSeq	CDS	642739	643344	.	+	0	ID=cds561;Name=YP_169645.1;Parent=gene632;Note=hydrolyzes proteins to small peptides%3B with the ATPase subunits ClpA or ClpX%2C ClpP degrades specific substrates;Dbxref=GOA:Q5NH47,InterPro:IPR018215,UniProtKB%2FSwiss-Prot:Q5NH47,Genbank:YP_169645.1,GeneID:3192361;gbkey=CDS;product=ATP-dependent Clp protease proteolytic subunit;protein_id=YP_169645.1;transl_table=11
NC_006570.2	RefSeq	gene	643368	644621	.	+	.	ID=gene633;Name=clpX;Dbxref=GeneID:3192507;gbkey=Gene;gene=clpX;locus_tag=FTT_0625
NC_006570.2	RefSeq	CDS	643368	644621	.	+	0	ID=cds562;Name=YP_169646.1;Parent=gene633;Note=binds and unfolds substrates as part of the ClpXP protease;Dbxref=GOA:Q5NH46,InterPro:IPR013093,UniProtKB%2FSwiss-Prot:Q5NH46,Genbank:YP_169646.1,GeneID:3192507;gbkey=CDS;product=ATP-dependent protease ATP-binding subunit ClpX;protein_id=YP_169646.1;transl_table=11
NC_006570.2	RefSeq	gene	644646	646970	.	+	.	ID=gene634;Name=lon;Dbxref=GeneID:3190802;gbkey=Gene;gene=lon;locus_tag=FTT_0626
NC_006570.2	RefSeq	CDS	644646	646970	.	+	0	ID=cds563;Name=YP_169647.1;Parent=gene634;Note=Similar to Q8Z8V0 Lon protease from Salmonella typhi %28784 aa%29. FASTA: opt: 2734 Z-score: 2797.3 E%28%29: 6.4e-148 Smith-Waterman score: 2734%3B 54.450 identity in 764 aa overlap.;Dbxref=GOA:Q5NH45,InterPro:IPR008269,UniProtKB%2FTrEMBL:Q5NH45,Genbank:YP_169647.1,GeneID:3190802;gbkey=CDS;product=DNA-binding%2C ATP-dependent protease La;protein_id=YP_169647.1;transl_table=11
NC_006570.2	RefSeq	gene	647057	647329	.	+	.	ID=gene635;Name=hupB;Dbxref=GeneID:3191898;gbkey=Gene;gene=hupB;locus_tag=FTT_0627
NC_006570.2	RefSeq	CDS	647057	647329	.	+	0	ID=cds564;Name=YP_169648.1;Parent=gene635;Note=Similar to Q93TM3 Histone-like protein HU form B from Pseudomonas putida %28strain KT2440%29 %2890 aa%29. FASTA: opt: 380 Z-score: 519.0 E%28%29: 5.2e-21 Smith-Waterman score: 380%3B 68.539 identity in 89 aa overlap.;Dbxref=GOA:Q5NH44,InterPro:IPR000119,UniProtKB%2FTrEMBL:Q5NH44,Genbank:YP_169648.1,GeneID:3191898;gbkey=CDS;product=histone-like protein HU form B;protein_id=YP_169648.1;transl_table=11
NC_006570.2	RefSeq	gene	647441	648871	.	+	.	ID=gene636;Name=FTT_0628;Dbxref=GeneID:3191142;gbkey=Gene;locus_tag=FTT_0628
NC_006570.2	RefSeq	CDS	647441	648871	.	+	0	ID=cds565;Name=YP_169649.1;Parent=gene636;Note=Similar to PPID_BUCAP %28Q8K987%29 Peptidyl-prolyl cis-trans isomerase from Buchnera aphidicola %28subsp. Schizaphis graminum%29 %28621 aa%29. FASTA: opt: 298 Z-score: 309.1E%28%29: 2.5e-09 Smith-Waterman score: 298%3B 23.362 identity in 351 aa overlap. 200 aa shorter %28in C-term%29 than most of the homologs. ORF ftt0628;Dbxref=UniProtKB%2FTrEMBL:Q5NH43,Genbank:YP_169649.1,GeneID:3191142;gbkey=CDS;product=hypothetical protein;protein_id=YP_169649.1;transl_table=11
NC_006570.2	RefSeq	gene	648872	649798	.	+	.	ID=gene637;Name=miaA;Dbxref=GeneID:3190845;gbkey=Gene;gene=miaA;locus_tag=FTT_0629
NC_006570.2	RefSeq	CDS	648872	649798	.	+	0	ID=cds566;Name=YP_169650.1;Parent=gene637;Note=IPP transferase%3B isopentenyltransferase%3B involved in tRNA modification%3B in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil%3B further tRNA modifications may occur%3B mutations in miaA result in defects in translation efficiency and fidelity;Dbxref=GOA:Q5NH42,InterPro:IPR018022,UniProtKB%2FSwiss-Prot:Q5NH42,Genbank:YP_169650.1,GeneID:3190845;gbkey=CDS;product=tRNA delta%282%29-isopentenylpyrophosphate transferase;protein_id=YP_169650.1;transl_table=11
NC_006570.2	RefSeq	gene	649909	650238	.	+	.	ID=gene638;Name=hfq;Dbxref=GeneID:3192428;gbkey=Gene;gene=hfq;locus_tag=FTT_0630
NC_006570.2	RefSeq	CDS	649909	650238	.	+	0	ID=cds567;Name=YP_169651.1;Parent=gene638;Note=Similar to HFQ_PASMU %28Q9CMC6%29 Hfq protein from Pasteurella multocida %2895 aa%29. FASTA: opt: 384 Z-score: 504.4 E%28%29: 3.3e-20 Smith-Waterman score: 384%3B 68.182 identity in 88 aa overlap. Plays a role in degradation of RNA transcripts.;Dbxref=GOA:Q5NH41,InterPro:IPR005001,UniProtKB%2FSwiss-Prot:Q5NH41,Genbank:YP_169651.1,GeneID:3192428;gbkey=CDS;product=host factor I for bacteriophage Q beta replication;protein_id=YP_169651.1;transl_table=11
NC_006570.2	RefSeq	gene	650290	651597	.	+	.	ID=gene639;Name=hflX;Dbxref=GeneID:3192427;gbkey=Gene;gene=hflX;locus_tag=FTT_0631
NC_006570.2	RefSeq	CDS	650290	651597	.	+	0	ID=cds568;Name=YP_169652.1;Parent=gene639;Note=Similar to Q87VJ5 GTP-binding protein HflX from Pseudomonas syringae %28pv. tomato%29 %28433 aa%29. FASTA: opt: 1331 Z-score: 1520.3 E%28%29: 8.6e-77 Smith-Waterman score: 1331%3B 49.302 identity in 430 aa overlap. Together with HflC-HflK involved in stability of phage lambda cII repressor;Dbxref=GOA:Q5NH40,InterPro:IPR016496,UniProtKB%2FTrEMBL:Q5NH40,Genbank:YP_169652.1,GeneID:3192427;gbkey=CDS;product=protease%2C GTP-binding subunit;protein_id=YP_169652.1;transl_table=11
NC_006570.2	RefSeq	gene	651608	652798	.	-	.	ID=gene640;Name=FTT_0632c;Dbxref=GeneID:3191141;gbkey=Gene;locus_tag=FTT_0632c
NC_006570.2	RefSeq	CDS	651608	652798	.	-	0	ID=cds569;Name=YP_169653.1;Parent=gene640;Note=Similar to O53772  oxidoreductase %28Monooxygenase%29 from Mycobacterium tuberculosis %28388 aa%29. FASTA: opt: 832 Z-score: 997.9 E%28%29: 1.1e-47 Smith-Waterman score: 832%3B 35.550 identity in 391 aa overlap. ORF ftt0632c;Dbxref=GOA:Q5NH39,InterPro:IPR006076,UniProtKB%2FTrEMBL:Q5NH39,Genbank:YP_169653.1,GeneID:3191141;gbkey=CDS;product=hypothetical protein;protein_id=YP_169653.1;transl_table=11
NC_006570.2	RefSeq	gene	652970	654037	.	+	.	ID=gene641;Name=hflK;Dbxref=GeneID:3192426;gbkey=Gene;gene=hflK;locus_tag=FTT_0633
NC_006570.2	RefSeq	CDS	652970	654037	.	+	0	ID=cds570;Name=YP_169654.1;Parent=gene641;Note=Similar to Q8FAK7 HflK protein from Escherichia coli %28419 aa%29. FASTA: opt: 843 Z-score: 932.9 E%28%29: 4.5e-44 Smith-Waterman score: 843%3B 40.0 identity in 330 aa overlap. With HflC%2C part of modulator for protease specific for FtsH phage lambda cII repressor.;Dbxref=GOA:Q5NH38,InterPro:IPR010201,UniProtKB%2FTrEMBL:Q5NH38,Genbank:YP_169654.1,GeneID:3192426;gbkey=CDS;product=hypothetical protein;protein_id=YP_169654.1;transl_table=11
NC_006570.2	RefSeq	gene	654039	654965	.	+	.	ID=gene642;Name=hflC;Dbxref=GeneID:3192425;gbkey=Gene;gene=hflC;locus_tag=FTT_0634
NC_006570.2	RefSeq	CDS	654039	654965	.	+	0	ID=cds571;Name=YP_169655.1;Parent=gene642;Note=Similar to Q8EJ66 HflC protein from Shewanella oneidensis %28297 aa%29. FASTA: opt: 799 Z-score: 895.3 E%28%29: 5.6e-42 Smith-Waterman score: 799%3B 42.466 identity in 292 aa overlap. With HflK%2C part of modulator for protease specific for FtsH phage lambda cII repressor.;Dbxref=GOA:Q5NH37,InterPro:IPR010200,UniProtKB%2FTrEMBL:Q5NH37,Genbank:YP_169655.1,GeneID:3192425;gbkey=CDS;product=hypothetical protein;protein_id=YP_169655.1;transl_table=11
NC_006570.2	RefSeq	gene	654966	655451	.	+	.	ID=gene643;Name=wzb;Dbxref=GeneID:3192102;gbkey=Gene;gene=wzb;locus_tag=FTT_0635
NC_006570.2	RefSeq	CDS	654966	655451	.	+	0	ID=cds572;Name=YP_169656.1;Parent=gene643;Note=Similar to O35016 YFKJ protein from Bacillus subtilis %28156 aa%29. FASTA: opt: 391 Z-score: 494.5 E%28%29: 1.2e-19 Smith-Waterman score: 391%3B 38.608 identity in 158 aa overlap.;Dbxref=GOA:Q5NH36,InterPro:IPR017867,UniProtKB%2FTrEMBL:Q5NH36,Genbank:YP_169656.1,GeneID:3192102;gbkey=CDS;product=low molecular weight %28LMW%29 phosphotyrosine protein phosphatase;protein_id=YP_169656.1;transl_table=11
NC_006570.2	RefSeq	gene	655448	656041	.	+	.	ID=gene644;Name=engB;Dbxref=GeneID:3191566;gbkey=Gene;gene=engB;locus_tag=FTT_0636
NC_006570.2	RefSeq	CDS	655448	656041	.	+	0	ID=cds573;Name=YP_169657.1;Parent=gene644;Note=binds guanine nucleotides%3B in Escherichia coli depletion results in defective cell division and filamentation%3B in Bacillus subtilis this gene is essential;Dbxref=GOA:Q5NH35,InterPro:IPR002917,UniProtKB%2FSwiss-Prot:Q5NH35,Genbank:YP_169657.1,GeneID:3191566;gbkey=CDS;product=ribosome biogenesis GTP-binding protein YsxC;protein_id=YP_169657.1;transl_table=11
NC_006570.2	RefSeq	gene	656184	657500	.	+	.	ID=gene645;Name=thrC2;Dbxref=GeneID:3190773;gbkey=Gene;gene=thrC2;locus_tag=FTT_0637;pseudo=true
NC_006570.2	RefSeq	gene	657478	657828	.	+	.	ID=gene646;Name=FTT_0638;Dbxref=GeneID:3191139;gbkey=Gene;locus_tag=FTT_0638
NC_006570.2	RefSeq	CDS	657478	657828	.	+	0	ID=cds574;Name=YP_169658.1;Parent=gene646;Note=fragment. Weak similarity to leuA LE12_METJA %28Q58595%29 2-isopropylmalate synthase 2 from Methanococcus jannaschii %28518 aa%29. FASTA: opt: 119 Z-score: 151.8 E%28%29: 1.5 Smith-Waterman score: 119%3B 26.316 identity in 114 aa overlap %286-115:356-467%29. Next downstream ORF also has similarity to leuA. ORF ftt0638;Dbxref=GOA:Q5NH34,InterPro:IPR013709,UniProtKB%2FTrEMBL:Q5NH34,Genbank:YP_169658.1,GeneID:3191139;gbkey=CDS;product=hypothetical protein;protein_id=YP_169658.1;transl_table=11
NC_006570.2	RefSeq	gene	657870	657980	.	+	.	ID=gene647;Name=FTT_0639;Dbxref=GeneID:3191138;gbkey=Gene;locus_tag=FTT_0639
NC_006570.2	RefSeq	CDS	657870	657980	.	+	0	ID=cds575;Name=YP_169659.1;Parent=gene647;Note=fragment. Weak similarity to leuA LE12_METJA %28Q58595%29 2-isopropylmalate synthase 2 from Methanococcus jannaschii %28518 aa%29. FASTA: opt: 86 Z-score: 142.0 E%28%29: 5.1 Smith-Waterman score: 86%3B 50.000 identity in 32 aa overlap %281-32:479-510%29. Next upstream ORF also have similarity to leuA. ORF ftt0639;Dbxref=GOA:Q5NH33,InterPro:IPR013709,UniProtKB%2FTrEMBL:Q5NH33,Genbank:YP_169659.1,GeneID:3191138;gbkey=CDS;product=hypothetical protein;protein_id=YP_169659.1;transl_table=11
NC_006570.2	RefSeq	gene	658004	659659	.	+	.	ID=gene648;Name=ilvD;Dbxref=GeneID:3191790;gbkey=Gene;gene=ilvD;locus_tag=FTT_0640
NC_006570.2	RefSeq	CDS	658004	659659	.	+	0	ID=cds576;Name=YP_169660.1;Parent=gene648;Note=catalyzes the dehydration of 2%2C3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis;Dbxref=GOA:Q5NH32,InterPro:IPR004404,UniProtKB%2FSwiss-Prot:Q5NH32,Genbank:YP_169660.1,GeneID:3191790;gbkey=CDS;product=dihydroxy-acid dehydratase;protein_id=YP_169660.1;transl_table=11
NC_006570.2	RefSeq	gene	659797	661517	.	+	.	ID=gene649;Name=ilvB;Dbxref=GeneID:3191521;gbkey=Gene;gene=ilvB;locus_tag=FTT_0641;pseudo=true
NC_006570.2	RefSeq	gene	661522	661839	.	+	.	ID=gene650;Name=ilvH;Dbxref=GeneID:3191561;gbkey=Gene;gene=ilvH;locus_tag=FTT_0642
NC_006570.2	RefSeq	CDS	661522	661839	.	+	0	ID=cds577;Name=YP_169661.1;Parent=gene650;Note=Similar to Q8A610 Acetohydroxyacid synthase small subunit %28187 aa%29. FASTA: opt: 159 Z-score: 221.3 E%28%29: 0.0002 Smith-Waterman score: 159%3B 33.333 identity in 75 aa overlap.;Dbxref=GOA:Q5NH31,InterPro:IPR002912,UniProtKB%2FTrEMBL:Q5NH31,Genbank:YP_169661.1,GeneID:3191561;gbkey=CDS;product=acetolactate synthase small subunit;protein_id=YP_169661.1;transl_table=11
NC_006570.2	RefSeq	gene	661867	662911	.	+	.	ID=gene651;Name=ilvC;Dbxref=GeneID:3192343;gbkey=Gene;gene=ilvC;locus_tag=FTT_0643;pseudo=true
NC_006570.2	RefSeq	gene	663034	666459	.	-	.	ID=gene652;Name=mfd;Dbxref=GeneID:3192296;gbkey=Gene;gene=mfd;locus_tag=FTT_0644c
NC_006570.2	RefSeq	CDS	663034	666459	.	-	0	ID=cds578;Name=YP_169662.1;Parent=gene652;Note=Similar to Q9CM06 Mfd from Pasteurella multocida %281145 aa%29. FASTA: opt: 3312 Z-score: 3697.7 E%28%29: 4.5e-198 Smith-Waterman score: 3312%3B 44.794 identity in 1143 aa overlap.;Dbxref=GOA:Q5NH30,InterPro:IPR014021,UniProtKB%2FTrEMBL:Q5NH30,Genbank:YP_169662.1,GeneID:3192296;gbkey=CDS;product=transcription-repair coupling factor;protein_id=YP_169662.1;transl_table=11
NC_006570.2	RefSeq	gene	666504	667190	.	-	.	ID=gene653;Name=FTT_0645c;Dbxref=GeneID:3191066;gbkey=Gene;locus_tag=FTT_0645c
NC_006570.2	RefSeq	CDS	666504	667190	.	-	0	ID=cds579;Name=YP_169663.1;Parent=gene653;Note=Similar to YCCA_ECOLI %28P06967%29 Hypothetical protein yccA from Escherichia coli %28219 aa%29. FASTA: opt: 588 Z-score: 603.2 E%28%29: 1.1e-25 Smith-Waterman score: 588%3B 48.416 identity in 221 aa overlap. ORF ftt0645c;Dbxref=GOA:Q5NH29,InterPro:IPR006214,UniProtKB%2FTrEMBL:Q5NH29,Genbank:YP_169663.1,GeneID:3191066;gbkey=CDS;product=hypothetical protein;protein_id=YP_169663.1;transl_table=11
NC_006570.2	RefSeq	gene	667306	668565	.	-	.	ID=gene654;Name=FTT_0646c;Dbxref=GeneID:3191065;gbkey=Gene;locus_tag=FTT_0646c
NC_006570.2	RefSeq	CDS	667306	668565	.	-	0	ID=cds580;Name=YP_169664.1;Parent=gene654;Note=ORF ftt0646c;Dbxref=UniProtKB%2FTrEMBL:Q5NH28,Genbank:YP_169664.1,GeneID:3191065;gbkey=CDS;product=hypothetical protein;protein_id=YP_169664.1;transl_table=11
NC_006570.2	RefSeq	gene	668565	668996	.	-	.	ID=gene655;Name=FTT_0647c;Dbxref=GeneID:3191064;gbkey=Gene;locus_tag=FTT_0647c
NC_006570.2	RefSeq	CDS	668565	668996	.	-	0	ID=cds581;Name=YP_169665.1;Parent=gene655;Note=Similar to Q82WE7 Hypothetical protein from Nitrosomonas europaea %28164 aa%29. FASTA: opt: 383 Z-score: 490.4 E%28%29: 2e-19 Smith-Waterman score: 383%3B 41.606 identity in 137 aa overlap. ORF ftt0647c;Dbxref=InterPro:IPR014993,UniProtKB%2FTrEMBL:Q5NH27,Genbank:YP_169665.1,GeneID:3191064;gbkey=CDS;product=hypothetical protein;protein_id=YP_169665.1;transl_table=11
NC_006570.2	RefSeq	gene	668993	669631	.	-	.	ID=gene656;Name=nth;Dbxref=GeneID:3191739;gbkey=Gene;gene=nth;locus_tag=FTT_0648c
NC_006570.2	RefSeq	CDS	668993	669631	.	-	0	ID=cds582;Name=YP_169666.1;Parent=gene656;Note=Similar to Q9HYB4 Endonuclease III from Pseudomonas aeruginosa %28212 aa%29. FASTA: opt: 916 Z-score: 1153.9 E%28%29: 2.2e-56 Smith-Waterman score: 916%3B 67.308identity in 208 aa overlap.;Dbxref=GOA:Q5NH26,InterPro:IPR005759,UniProtKB%2FTrEMBL:Q5NH26,Genbank:YP_169666.1,GeneID:3191739;gbkey=CDS;product=endonuclease III;protein_id=YP_169666.1;transl_table=11
NC_006570.2	RefSeq	gene	669624	670253	.	-	.	ID=gene657;Name=rnfB;Dbxref=GeneID:3191608;gbkey=Gene;gene=rnfB;locus_tag=FTT_0649c
NC_006570.2	RefSeq	CDS	669624	670253	.	-	0	ID=cds583;Name=YP_169667.1;Parent=gene657;Note=Similar to Q83B23 4Fe-4S binding domain protein from Coxiella burnetii %28213 aa%29. FASTA: opt: 552 Z-score: 680.7 E%28%29: 5e-30 Smith-Waterman score: 552%3B 42.788 identity in 208 aa overlap.;Dbxref=GOA:Q5NH25,InterPro:IPR017900,UniProtKB%2FTrEMBL:Q5NH25,Genbank:YP_169667.1,GeneID:3191608;gbkey=CDS;product=%28Fe-S%29-binding protein;protein_id=YP_169667.1;transl_table=11
NC_006570.2	RefSeq	gene	670255	670899	.	-	.	ID=gene658;Name=grxB;Dbxref=GeneID:3192277;gbkey=Gene;gene=grxB;locus_tag=FTT_0650c
NC_006570.2	RefSeq	CDS	670255	670899	.	-	0	ID=cds584;Name=YP_169668.1;Parent=gene658;Note=cofactor involved in the reduction of disulfides;Dbxref=InterPro:IPR017933,UniProtKB%2FTrEMBL:Q5NH24,Genbank:YP_169668.1,GeneID:3192277;gbkey=CDS;product=glutaredoxin;protein_id=YP_169668.1;transl_table=11
NC_006570.2	RefSeq	gene	670961	672529	.	+	.	ID=gene659;Name=FTT_0651;Dbxref=GeneID:3191063;gbkey=Gene;locus_tag=FTT_0651
NC_006570.2	RefSeq	CDS	670961	672529	.	+	0	ID=cds585;Name=YP_169669.1;Parent=gene659;Note=Similar to Q9L9P6 IraB from Legionella pneumophila %28501 aa%29. FASTA: opt: 1486 Z-score: 1640.1 E%28%29: 1.8e-83 Smith-Waterman score: 1486%3B 46.708 identity in 486 aa overlap. ORF ftt0651;Dbxref=GOA:Q5NH23,InterPro:IPR005279,UniProtKB%2FTrEMBL:Q5NH23,Genbank:YP_169669.1,GeneID:3191063;gbkey=CDS;product=proton-dependent oligopeptide transport %28POT%29 family protein;protein_id=YP_169669.1;transl_table=11
NC_006570.2	RefSeq	gene	672532	673029	.	-	.	ID=gene660;Name=ftnA;Dbxref=GeneID:3191830;gbkey=Gene;gene=ftnA;locus_tag=FTT_0652c
NC_006570.2	RefSeq	CDS	672532	673029	.	-	0	ID=cds586;Name=YP_169670.1;Parent=gene660;Note=Similar to Q899N4 Ferritin from Clostridium tetani %28169 aa%29. FASTA: opt: 527 Z-score: 679.5 E%28%29: 5.9e-30 Smith-Waterman score: 527%3B 45.783identity in 166 aa overlap.;Dbxref=GOA:Q5NH22,InterPro:IPR012347,UniProtKB%2FTrEMBL:Q5NH22,Genbank:YP_169670.1,GeneID:3191830;gbkey=CDS;product=ferritin;protein_id=YP_169670.1;transl_table=11
NC_006570.2	RefSeq	gene	673236	674219	.	+	.	ID=gene661;Name=lipA;Dbxref=GeneID:3190780;gbkey=Gene;gene=lipA;locus_tag=FTT_0653
NC_006570.2	RefSeq	CDS	673236	674219	.	+	0	ID=cds587;Name=YP_169671.1;Parent=gene661;Note=catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein %28ACP%29 bound to an octanoyl group to produce a lipoyl group;Dbxref=GOA:Q5NH21,InterPro:IPR013785,UniProtKB%2FSwiss-Prot:Q5NH21,Genbank:YP_169671.1,GeneID:3190780;gbkey=CDS;product=lipoyl synthase;protein_id=YP_169671.1;transl_table=11
NC_006570.2	RefSeq	gene	674249	674908	.	+	.	ID=gene662;Name=elbB;Dbxref=GeneID:3191558;gbkey=Gene;gene=elbB;locus_tag=FTT_0654
NC_006570.2	RefSeq	CDS	674249	674908	.	+	0	ID=cds588;Name=YP_169672.1;Parent=gene662;Note=Similar to Q87IN9 Sigma cross-reacting protein 27A from Vibrio parahaemolyticus %28216 aa%29. FASTA: opt: 683 Z-score: 873.4 E%28%29: 9.3e-41 Smith-Waterman score: 683%3B 49.074 identity in 216 aa overlap.;Dbxref=InterPro:IPR002818,UniProtKB%2FTrEMBL:Q5NH20,Genbank:YP_169672.1,GeneID:3191558;gbkey=CDS;product=isoprenoid biosynthesis protein with amidotransferase-like domain;protein_id=YP_169672.1;transl_table=11
NC_006570.2	RefSeq	gene	674924	675670	.	+	.	ID=gene663;Name=FTT_0655;Dbxref=GeneID:3191062;gbkey=Gene;locus_tag=FTT_0655
NC_006570.2	RefSeq	CDS	674924	675670	.	+	0	ID=cds589;Name=YP_169673.1;Parent=gene663;Note=Similar to YO32_SHEON %28Q8EEF0%29 Hypothetical UPF0082 protein SO2432 from Shewanella oneidensis %28248 aa%29. FASTA: opt: 1090 Z-score: 1308.8 E%28%29: 5.2e-65 Smith-Waterman score: 1090%3B 64.516 identity in 248 aa overlap. ORF ftt0655;Dbxref=InterPro:IPR017856,UniProtKB%2FSwiss-Prot:Q5NH19,Genbank:YP_169673.1,GeneID:3191062;gbkey=CDS;product=hypothetical protein;protein_id=YP_169673.1;transl_table=11
NC_006570.2	RefSeq	gene	675746	676282	.	+	.	ID=gene664;Name=ruvC;Dbxref=GeneID:3192532;gbkey=Gene;gene=ruvC;locus_tag=FTT_0656
NC_006570.2	RefSeq	CDS	675746	676282	.	+	0	ID=cds590;Name=YP_169674.1;Parent=gene664;Note=endonuclease%3B resolves Holliday structures%3B forms a complex of RuvABC%3B the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration%3B RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity;Dbxref=GOA:Q5NH18,InterPro:IPR002176,UniProtKB%2FSwiss-Prot:Q5NH18,Genbank:YP_169674.1,GeneID:3192532;gbkey=CDS;product=Holliday junction resolvase;protein_id=YP_169674.1;transl_table=11
NC_006570.2	RefSeq	gene	676355	677548	.	+	.	ID=gene665;Name=FTT_0657;Dbxref=GeneID:3191061;gbkey=Gene;locus_tag=FTT_0657;pseudo=true
NC_006570.2	RefSeq	gene	677567	678220	.	+	.	ID=gene666;Name=ruvA;Dbxref=GeneID:3191358;gbkey=Gene;gene=ruvA;locus_tag=FTT_0658
NC_006570.2	RefSeq	CDS	677567	678220	.	+	0	ID=cds591;Name=YP_169675.1;Parent=gene666;Note=plays an essential role in ATP-dependent branch migration of the Holliday junction;Dbxref=GOA:Q5NH17,InterPro:IPR013849,UniProtKB%2FSwiss-Prot:Q5NH17,Genbank:YP_169675.1,GeneID:3191358;gbkey=CDS;product=Holliday junction DNA helicase RuvA;protein_id=YP_169675.1;transl_table=11
NC_006570.2	RefSeq	gene	678246	679658	.	+	.	ID=gene667;Name=FTT_0659;Dbxref=GeneID:3191059;gbkey=Gene;locus_tag=FTT_0659
NC_006570.2	RefSeq	CDS	678246	679658	.	+	0	ID=cds592;Name=YP_169676.1;Parent=gene667;Note=Similar to Q87TH5 Conserved hypothetical protein from Vibrio parahaemolyticus %28514 aa%29. FASTA: opt: 1129 Z-score: 1083.4 E%28%29: 1.9e-52 Smith-Waterman score: 1132%3B 42.000 identity in 450 aa overlap ORF ftt0659;Dbxref=InterPro:IPR003798,UniProtKB%2FTrEMBL:Q5NH16,Genbank:YP_169676.1,GeneID:3191059;gbkey=CDS;product=DNA recombination protein RmuC family protein;protein_id=YP_169676.1;transl_table=11
NC_006570.2	RefSeq	gene	679707	680294	.	+	.	ID=gene668;Name=FTT_0660;Dbxref=GeneID:3191060;gbkey=Gene;locus_tag=FTT_0660
NC_006570.2	RefSeq	CDS	679707	680294	.	+	0	ID=cds593;Name=YP_169677.1;Parent=gene668;Note=ORF ftt0660;Dbxref=UniProtKB%2FTrEMBL:Q5NH15,Genbank:YP_169677.1,GeneID:3191060;gbkey=CDS;product=hypothetical protein;protein_id=YP_169677.1;transl_table=11
NC_006570.2	RefSeq	gene	680316	680612	.	-	.	ID=gene669;Name=FTT_0661c;Dbxref=GeneID:3191057;gbkey=Gene;locus_tag=FTT_0661c
NC_006570.2	RefSeq	CDS	680316	680612	.	-	0	ID=cds594;Name=YP_169678.1;Parent=gene669;Note=Similar to Q82LF3 Hypothetical protein from Streptomyces avermitilis %28109 aa%29. FASTA: opt: 260 Z-score: 364.1 E%28%29: 2.2e-12 Smith-Waterman score: 260%3B 47.778 identity in 90 aa overlap. The homologs are of different sizes. ORF ftt0661c;Dbxref=UniProtKB%2FTrEMBL:Q5NH14,Genbank:YP_169678.1,GeneID:3191057;gbkey=CDS;product=hypothetical protein;protein_id=YP_169678.1;transl_table=11
NC_006570.2	RefSeq	gene	680775	681158	.	-	.	ID=gene670;Name=FTT_0662c;Dbxref=GeneID:3191058;gbkey=Gene;locus_tag=FTT_0662c
NC_006570.2	RefSeq	CDS	680775	681158	.	-	0	ID=cds595;Name=YP_169679.1;Parent=gene670;Note=Similar to Q9KMT3 Hypothetical protein VCA0237 from Vibrio cholerae %28189 aa%29. FASTA: opt: 308 Z-score: 400.0 E%28%29: 2.2e-14 Smith-Waterman score: 308%3B 42.857 identity in 112 aa overlap. ORF ftt0662c;Dbxref=InterPro:IPR016878,UniProtKB%2FTrEMBL:Q5NH13,Genbank:YP_169679.1,GeneID:3191058;gbkey=CDS;product=hypothetical protein;protein_id=YP_169679.1;transl_table=11
NC_006570.2	RefSeq	gene	681271	682083	.	+	.	ID=gene671;Name=FTT_0663;Dbxref=GeneID:3191056;gbkey=Gene;locus_tag=FTT_0663
NC_006570.2	RefSeq	CDS	681271	682083	.	+	0	ID=cds596;Name=YP_169680.1;Parent=gene671;Note=ORF ftt0663;Dbxref=GOA:Q5NH12,InterPro:IPR006992,UniProtKB%2FTrEMBL:Q5NH12,Genbank:YP_169680.1,GeneID:3191056;gbkey=CDS;product=hypothetical protein;protein_id=YP_169680.1;transl_table=11
NC_006570.2	RefSeq	gene	682070	683206	.	-	.	ID=gene672;Name=hdc;Dbxref=GeneID:3192413;gbkey=Gene;gene=hdc;locus_tag=FTT_0664c
NC_006570.2	RefSeq	CDS	682070	683206	.	-	0	ID=cds597;Name=YP_169681.1;Parent=gene672;Note=catalyzes the formation of histamine from L-histidine;Dbxref=GOA:Q5NH11,InterPro:IPR015421,UniProtKB%2FTrEMBL:Q5NH11,Genbank:YP_169681.1,GeneID:3192413;gbkey=CDS;product=histidine decarboxylase;protein_id=YP_169681.1;transl_table=11
NC_006570.2	RefSeq	gene	683314	683919	.	-	.	ID=gene673;Name=FTT_0665c;Dbxref=GeneID:3191054;gbkey=Gene;locus_tag=FTT_0665c
NC_006570.2	RefSeq	CDS	683314	683919	.	-	0	ID=cds598;Name=YP_169682.1;Parent=gene673;Note=Similar to Q88IX8 Class II aldolase%2Fadducin domain protein from Pseudomonas putida %28strain KT2440%29 %28251 aa%29. FASTA: opt: 472 Z-score: 599.3 E%28%29: 1.7e-25 Smith-Waterman score: 472%3B 38.579identity in 197 aa overlap. ORF ftt0665c;Dbxref=GOA:Q5NH10,InterPro:IPR001303,UniProtKB%2FTrEMBL:Q5NH10,Genbank:YP_169682.1,GeneID:3191054;gbkey=CDS;product=aldolase;protein_id=YP_169682.1;transl_table=11
NC_006570.2	RefSeq	gene	684010	684591	.	-	.	ID=gene674;Name=FTT_0666c;Dbxref=GeneID:3191052;gbkey=Gene;locus_tag=FTT_0666c
NC_006570.2	RefSeq	CDS	684010	684591	.	-	0	ID=cds599;Name=YP_169683.1;Parent=gene674;Note=Similar to Q896H4 DNA-3-methyladenine glycosylase from Clostridium tetani %28203 aa%29. FASTA: opt: 451 Z-score: 589.0 E%28%29: 6.4e-25 Smith-Waterman score: 451%3B 42.784 identity in 194 aa overlap. ORF ftt0666c;Dbxref=GOA:Q5NH09,InterPro:IPR003180,UniProtKB%2FSwiss-Prot:Q5NH09,Genbank:YP_169683.1,GeneID:3191052;gbkey=CDS;product=methylpurine-DNA glycosylase family protein;protein_id=YP_169683.1;transl_table=11
NC_006570.2	RefSeq	gene	684719	685222	.	+	.	ID=gene675;Name=FTT_0667;Dbxref=GeneID:3191053;gbkey=Gene;locus_tag=FTT_0667
NC_006570.2	RefSeq	CDS	684719	685222	.	+	0	ID=cds600;Name=YP_169684.1;Parent=gene675;Note=ORF ftt0667;Dbxref=GOA:Q5NH08,InterPro:IPR000868,UniProtKB%2FTrEMBL:Q5NH08,Genbank:YP_169684.1,GeneID:3191053;gbkey=CDS;product=hypothetical protein;protein_id=YP_169684.1;transl_table=11
NC_006570.2	RefSeq	gene	685222	685854	.	+	.	ID=gene676;Name=FTT_0668;Dbxref=GeneID:3191048;gbkey=Gene;locus_tag=FTT_0668
NC_006570.2	RefSeq	CDS	685222	685854	.	+	0	ID=cds601;Name=YP_169685.1;Parent=gene676;Note=Similar to Q8A546  membrane transporter involved in nicotinamide mononucleotide transport from Bacteroides thetaiotaomicron %28188 aa%29. FASTA: opt: 333 Z-score: 403.8 E%28%29: 1.3e-14 Smith-Waterman score: 333%3B 29.016identity in 193 aa overlap. ORF ftt0668;Dbxref=GOA:Q5NH07,InterPro:IPR006419,UniProtKB%2FTrEMBL:Q5NH07,Genbank:YP_169685.1,GeneID:3191048;gbkey=CDS;product=nicotinamide mononucleotide transport %28NMT%29 family protein;protein_id=YP_169685.1;transl_table=11
NC_006570.2	RefSeq	gene	685952	687127	.	+	.	ID=gene677;Name=FTT_0669;Dbxref=GeneID:3191049;gbkey=Gene;locus_tag=FTT_0669
NC_006570.2	RefSeq	CDS	685952	687127	.	+	0	ID=cds602;Name=YP_169686.1;Parent=gene677;Note=Similar to Q8GRF6 MagA protein from Magnetospirillum magnetotacticum %28Aquaspirillum magnetotacticum%29 %28432 aa%29. FASTA: opt: 769 Z-score: 826.0 E%28%29: 4.1e-38 Smith-Waterman score: 769%3B 31.635identity in 373 aa overlap. ORF ftt0669;Dbxref=GOA:Q5NH06,InterPro:IPR006153,UniProtKB%2FTrEMBL:Q5NH06,Genbank:YP_169686.1,GeneID:3191049;gbkey=CDS;product=Sodium%2Fhydrogen exchanger family protein;protein_id=YP_169686.1;transl_table=11
NC_006570.2	RefSeq	gene	687460	687924	.	-	.	ID=gene678;Name=FTT_0670c;Dbxref=GeneID:3191047;gbkey=Gene;locus_tag=FTT_0670c
NC_006570.2	RefSeq	CDS	687460	687924	.	-	0	ID=cds603;Name=YP_169687.1;Parent=gene678;Note=ORF ftt0670c;Dbxref=GOA:Q5NH05,InterPro:IPR006685,UniProtKB%2FTrEMBL:Q5NH05,Genbank:YP_169687.1,GeneID:3191047;gbkey=CDS;product=hypothetical protein;protein_id=YP_169687.1;transl_table=11
NC_006570.2	RefSeq	gene	688237	689517	.	+	.	ID=gene679;Name=FTT_0671;Dbxref=GeneID:3191045;gbkey=Gene;locus_tag=FTT_0671
NC_006570.2	RefSeq	CDS	688237	689517	.	+	0	ID=cds604;Name=YP_169688.1;Parent=gene679;Note=Similar to Q83DX6 Major facilitator family transporter from Coxiella burnetii %28421 aa%29. FASTA: opt: 689 Z-score: 731.9 E%28%29: 7.1e-33 Smith-Waterman score: 689%3B 29.197identity in 411 aa overlap. ORF ftt0671;Dbxref=InterPro:IPR011701,UniProtKB%2FTrEMBL:Q5NH04,Genbank:YP_169688.1,GeneID:3191045;gbkey=CDS;product=major facilitator transporter;protein_id=YP_169688.1;transl_table=11
NC_006570.2	RefSeq	gene	689524	690811	.	-	.	ID=gene680;Name=FTT_0672c;Dbxref=GeneID:3191044;gbkey=Gene;locus_tag=FTT_0672c;pseudo=true
NC_006570.2	RefSeq	gene	690789	691796	.	-	.	ID=gene681;Name=FTT_0673c;Dbxref=GeneID:3191042;gbkey=Gene;locus_tag=FTT_0673c
NC_006570.2	RefSeq	CDS	690789	691796	.	-	0	ID=cds605;Name=YP_169689.1;Parent=gene681;Note=Similar to Q8DF84 Predicted deacylase from Vibrio vulnificus %28352 aa%29. FASTA: opt: 789 Z-score: 951.5 E%28%29: 4.2e-45 Smith-Waterman score: 789%3B 34.328 identity in 335 aa overlap. ORF ftt0673c;Dbxref=GOA:Q5NH03,InterPro:IPR007036,UniProtKB%2FTrEMBL:Q5NH03,Genbank:YP_169689.1,GeneID:3191042;gbkey=CDS;product=hypothetical protein;protein_id=YP_169689.1;transl_table=11
NC_006570.2	RefSeq	gene	692007	692975	.	+	.	ID=gene682;Name=prsA;Dbxref=GeneID:3191230;gbkey=Gene;gene=prsA;locus_tag=FTT_0674
NC_006570.2	RefSeq	CDS	692007	692975	.	+	0	ID=cds606;Name=YP_169690.1;Parent=gene682;Note=Similar to KPRS_RALSO %28Q8Y2E1%29 Ribose-phosphate pyrophosphokinase from Ralstonia solanacearum %28Pseudomonas solanacearum%29 %28316 aa%29. FASTA: opt: 1269 Z-score: 1520.3 E%28%29: 8.6e-77 Smith-Waterman score: 1269%3B 58.413 identity in 315 aa overlap.;Dbxref=GOA:Q5NH02,InterPro:IPR005946,UniProtKB%2FTrEMBL:Q5NH02,Genbank:YP_169690.1,GeneID:3191230;gbkey=CDS;product=ribose-phosphate pyrophosphokinase;protein_id=YP_169690.1;transl_table=11
NC_006570.2	RefSeq	gene	693075	693365	.	+	.	ID=gene683;Name=rplY;Dbxref=GeneID:3191997;gbkey=Gene;gene=rplY;locus_tag=FTT_0675
NC_006570.2	RefSeq	CDS	693075	693365	.	+	0	ID=cds607;Name=YP_169691.1;Parent=gene683;Note=the Ctc family of proteins consists of two types%2C one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response;Dbxref=GOA:Q5NH01,InterPro:IPR001021,UniProtKB%2FSwiss-Prot:Q5NH01,Genbank:YP_169691.1,GeneID:3191997;gbkey=CDS;product=50S ribosomal protein L25;protein_id=YP_169691.1;transl_table=11
NC_006570.2	RefSeq	gene	693461	694720	.	+	.	ID=gene684;Name=FTT_0676;Dbxref=GeneID:3191043;gbkey=Gene;locus_tag=FTT_0676
NC_006570.2	RefSeq	CDS	693461	694720	.	+	0	ID=cds608;Name=YP_169692.1;Parent=gene684;Note=Similar to Q83E77 Hypothetical protein from Coxiella burnetii %28417 aa%29. FASTA: opt: 1049 Z-score: 1211.5 E%28%29: 1.4e-59 Smith-Waterman score: 1049%3B 40.049 identity in 407 aa overlap. ORF ftt0676;Dbxref=GOA:Q5NH00,InterPro:IPR005170,UniProtKB%2FTrEMBL:Q5NH00,Genbank:YP_169692.1,GeneID:3191043;gbkey=CDS;product=hypothetical protein;protein_id=YP_169692.1;transl_table=11
NC_006570.2	RefSeq	gene	694925	695701	.	-	.	ID=gene685;Name=FTT_0677c;Dbxref=GeneID:3191041;gbkey=Gene;locus_tag=FTT_0677c
NC_006570.2	RefSeq	CDS	694925	695701	.	-	0	ID=cds609;Name=YP_169693.1;Parent=gene685;Note=Similar to Q8Z984  methyltransferase from Salmonella typhi %28256 aa%29. FASTA: opt: 707 Z-score: 818.1 E%28%29: 1.1e-37 Smith-Waterman score: 707%3B 42.570 identity in 249 aa overlap. ORF ftt0677c;Dbxref=GOA:Q5NGZ9,InterPro:IPR013216,UniProtKB%2FTrEMBL:Q5NGZ9,Genbank:YP_169693.1,GeneID:3191041;gbkey=CDS;product=hypothetical protein;protein_id=YP_169693.1;transl_table=11
NC_006570.2	RefSeq	gene	696310	696585	.	-	.	ID=gene686;Name=FTT_0678c;Dbxref=GeneID:3191039;gbkey=Gene;locus_tag=FTT_0678c
NC_006570.2	RefSeq	CDS	696310	696585	.	-	0	ID=cds610;Name=YP_169694.1;Parent=gene686;Note=ORF ftt0678c;Dbxref=UniProtKB%2FTrEMBL:Q5NGZ8,Genbank:YP_169694.1,GeneID:3191039;gbkey=CDS;product=hypothetical protein;protein_id=YP_169694.1;transl_table=11
NC_006570.2	RefSeq	gene	696600	697691	.	-	.	ID=gene687;Name=FTT_0679c;Dbxref=GeneID:3191040;gbkey=Gene;locus_tag=FTT_0679c
NC_006570.2	RefSeq	CDS	696600	697691	.	-	0	ID=cds611;Name=YP_169695.1;Parent=gene687;Note=translation-associated GTPase%3B the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure %28PDB: 1NI3%29%3B fluorescence spectroscopy revealed nucleic acid binding%3B the yeast protein YBR025c interacts with the translation elongation factor eEF1;Dbxref=GOA:Q5NGZ7,InterPro:IPR013029,UniProtKB%2FTrEMBL:Q5NGZ7,Genbank:YP_169695.1,GeneID:3191040;gbkey=CDS;product=GTP-dependent nucleic acid-binding protein EngD;protein_id=YP_169695.1;transl_table=11
NC_006570.2	RefSeq	gene	697710	698285	.	-	.	ID=gene688;Name=pth;Dbxref=GeneID:3191676;gbkey=Gene;gene=pth;locus_tag=FTT_0680c
NC_006570.2	RefSeq	CDS	697710	698285	.	-	0	ID=cds612;Name=YP_169696.1;Parent=gene688;Note=Enables the recycling of peptidyl-tRNAs produced at termination of translation;Dbxref=GOA:Q5NGZ6,InterPro:IPR018171,UniProtKB%2FSwiss-Prot:Q5NGZ6,Genbank:YP_169696.1,GeneID:3191676;gbkey=CDS;product=peptidyl-tRNA hydrolase;protein_id=YP_169696.1;transl_table=11
NC_006570.2	RefSeq	gene	698278	699162	.	-	.	ID=gene689;Name=blaA;Dbxref=GeneID:3190964;gbkey=Gene;gene=blaA;locus_tag=FTT_0681c
NC_006570.2	RefSeq	CDS	698278	699162	.	-	0	ID=cds613;Name=YP_169697.1;Parent=gene689;Note=Similar to BLAC_YEREN %28Q01166%29 Beta-lactamase precursor from Yersinia enterocolitica %28294 aa%29. FASTA: opt: 670 Z-score: 829.7 E%28%29: 2.5e-38 Smith-Waterman score: 670%3B 36.268 identity in 284 aa overlap.;Dbxref=GOA:Q5NGZ5,InterPro:IPR001466,UniProtKB%2FTrEMBL:Q5NGZ5,Genbank:YP_169697.1,GeneID:3190964;gbkey=CDS;product=Beta-lactamase class A;protein_id=YP_169697.1;transl_table=11
NC_006570.2	RefSeq	gene	699171	700016	.	-	.	ID=gene690;Name=FTT_0682c;Dbxref=GeneID:3191037;gbkey=Gene;locus_tag=FTT_0682c
NC_006570.2	RefSeq	CDS	699171	700016	.	-	0	ID=cds614;Name=YP_169698.1;Parent=gene690;Note=ORF ftt0682c;Dbxref=InterPro:IPR012335,UniProtKB%2FTrEMBL:Q5NGZ4,Genbank:YP_169698.1,GeneID:3191037;gbkey=CDS;product=hypothetical protein;protein_id=YP_169698.1;transl_table=11
NC_006570.2	RefSeq	gene	700056	700874	.	-	.	ID=gene691;Name=pilD;Dbxref=GeneID:3191481;gbkey=Gene;gene=pilD;locus_tag=FTT_0683c
NC_006570.2	RefSeq	CDS	700056	700874	.	-	0	ID=cds615;Name=YP_169699.1;Parent=gene691;Note=Similar to Q888U2 Type IV pilus prepilin peptidase PilD from Pseudomonas syringae %28pv. tomato%29 %28290 aa%29. FASTA: opt: 784 Z-score: 898.0 E%28%29: 4e-42 Smith-Waterman score: 784%3B 44.531identity in 256 aa overlap. Cleaves the leader peptide of the fiber building block proteins and methylates the resulting N-terminal residue.;Dbxref=GOA:Q5NGZ3,InterPro:IPR014032,UniProtKB%2FTrEMBL:Q5NGZ3,Genbank:YP_169699.1,GeneID:3191481;gbkey=CDS;product=Type IV pili leader peptidase and methylase;protein_id=YP_169699.1;transl_table=11
NC_006570.2	RefSeq	gene	700878	702293	.	-	.	ID=gene692;Name=sthA;Dbxref=GeneID:3190728;gbkey=Gene;gene=sthA;locus_tag=FTT_0684c
NC_006570.2	RefSeq	CDS	700878	702293	.	-	0	ID=cds616;Name=YP_169700.1;Parent=gene692;Note=catalyzes the conversion of NADPH to NADH;Dbxref=GOA:Q5NGZ2,InterPro:IPR013027,UniProtKB%2FTrEMBL:Q5NGZ2,Genbank:YP_169700.1,GeneID:3190728;gbkey=CDS;product=soluble pyridine nucleotide transhydrogenase;protein_id=YP_169700.1;transl_table=11
NC_006570.2	RefSeq	gene	702547	703530	.	-	.	ID=gene693;Name=FTT_0685c;Dbxref=GeneID:3191036;gbkey=Gene;locus_tag=FTT_0685c
NC_006570.2	RefSeq	CDS	702547	703530	.	-	0	ID=cds617;Name=YP_169701.1;Parent=gene693;Note=Similar to KCH_ECOLI %28P31069%29  potassium channel protein %28417 aa%29. FASTA: opt: 381 Z-score: 423.3 E%28%29: 1.1e-15 Smith-Waterman score: 381%3B 31.203identity in 266 aa overlap. ORF ftt0685c;Dbxref=GOA:Q5NGZ1,InterPro:IPR013099,UniProtKB%2FTrEMBL:Q5NGZ1,Genbank:YP_169701.1,GeneID:3191036;gbkey=CDS;product=potassium channel protein;protein_id=YP_169701.1;transl_table=11
NC_006570.2	RefSeq	gene	703610	704914	.	-	.	ID=gene694;Name=FTT_0686c;Dbxref=GeneID:3191033;gbkey=Gene;locus_tag=FTT_0686c
NC_006570.2	RefSeq	CDS	703610	704914	.	-	0	ID=cds618;Name=YP_169702.1;Parent=gene694;Note=Similar to Q83E30 Proton%2Fpeptide symporter family protein from Coxiella burnetii %28492 aa%29. FASTA: opt: 609 Z-score: 644.8 E%28%29: 5e-28 Smith-Waterman score: 609%3B 26.545 identity in 437 aa overlap. The start is approx 55 aa later than the homologs. ORF ftt0686c;Dbxref=GOA:Q5NGZ0,InterPro:IPR005279,UniProtKB%2FTrEMBL:Q5NGZ0,Genbank:YP_169702.1,GeneID:3191033;gbkey=CDS;product=proton-dependent oligopeptide transport %28POT%29 family protein;protein_id=YP_169702.1;transl_table=11
NC_006570.2	RefSeq	gene	705161	706528	.	-	.	ID=gene695;Name=hslU;Dbxref=GeneID:3192080;gbkey=Gene;gene=hslU;locus_tag=FTT_0687c
NC_006570.2	RefSeq	CDS	705161	706528	.	-	0	ID=cds619;Name=YP_169703.1;Parent=gene695;Note=heat shock protein involved in degradation of misfolded proteins;Dbxref=GOA:Q5NGY9,InterPro:IPR013093,UniProtKB%2FSwiss-Prot:Q5NGY9,Genbank:YP_169703.1,GeneID:3192080;gbkey=CDS;product=ATP-dependent protease ATP-binding subunit HslU;protein_id=YP_169703.1;transl_table=11
NC_006570.2	RefSeq	gene	706536	707087	.	-	.	ID=gene696;Name=hslV;Dbxref=GeneID:3191560;gbkey=Gene;gene=hslV;locus_tag=FTT_0688c
NC_006570.2	RefSeq	CDS	706536	707087	.	-	0	ID=cds620;Name=YP_169704.1;Parent=gene696;Note=heat shock protein involved in degradation of misfolded proteins;Dbxref=GOA:Q5NGY8,InterPro:IPR001353,UniProtKB%2FTrEMBL:Q5NGY8,Genbank:YP_169704.1,GeneID:3191560;gbkey=CDS;product=ATP-dependent protease peptidase subunit;protein_id=YP_169704.1;transl_table=11
NC_006570.2	RefSeq	gene	707279	708028	.	+	.	ID=gene697;Name=FTT_0689;Dbxref=GeneID:3191031;gbkey=Gene;locus_tag=FTT_0689
NC_006570.2	RefSeq	CDS	707279	708028	.	+	0	ID=cds621;Name=YP_169705.1;Parent=gene697;Note=ORF ftt0689;Dbxref=UniProtKB%2FTrEMBL:Q5NGY7,Genbank:YP_169705.1,GeneID:3191031;gbkey=CDS;product=hypothetical protein;protein_id=YP_169705.1;transl_table=11
NC_006570.2	RefSeq	gene	708031	708933	.	-	.	ID=gene698;Name=lplA;Dbxref=GeneID:3192472;gbkey=Gene;gene=lplA;locus_tag=FTT_0690c
NC_006570.2	RefSeq	CDS	708031	708933	.	-	0	ID=cds622;Name=YP_169706.1;Parent=gene698;Note=Similar to Q9KS71 Lipoate-protein ligase A from Vibrio cholerae %28338 aa%29. FASTA: opt: 699 Z-score: 831.1 E%28%29: 2.1e-38 Smith-Waterman score: 699%3B 38.545identity in 275 aa overlap.;Dbxref=GOA:Q5NGY6,InterPro:IPR004562,UniProtKB%2FTrEMBL:Q5NGY6,Genbank:YP_169706.1,GeneID:3192472;gbkey=CDS;product=lipoate-protein ligase A;protein_id=YP_169706.1;transl_table=11
NC_006570.2	RefSeq	gene	709046	710236	.	+	.	ID=gene699;Name=tyrS;Dbxref=GeneID:3191006;gbkey=Gene;gene=tyrS;locus_tag=FTT_0691
NC_006570.2	RefSeq	CDS	709046	710236	.	+	0	ID=cds623;Name=YP_169707.1;Parent=gene699;Note=catalyzes the formation of tyrosyl-tRNA%28Tyr%29 from tyrosine and tRNA%28Tyr%29;Dbxref=GOA:Q5NGY5,InterPro:IPR014729,UniProtKB%2FSwiss-Prot:Q5NGY5,Genbank:YP_169707.1,GeneID:3191006;gbkey=CDS;product=tyrosyl-tRNA synthetase;protein_id=YP_169707.1;transl_table=11
NC_006570.2	RefSeq	repeat_region	710638	710649	.	-	.	ID=id100;Note=ISFtu1 12bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	gene	710737	711521	.	-	.	ID=gene700;Name=isftu1;Dbxref=GeneID:3190809;gbkey=Gene;gene=isftu1;locus_tag=FTT_0692c
NC_006570.2	RefSeq	CDS	711195	711521	.	-	0	ID=cds624;Name=YP_169708.1;Parent=gene700;Note=ISFtu1. Transposase%2C member of the IS630 Tc-1 mariner family. Identical to Q93EJ6  transposase from Francisella tularensis %28118 aa%29 from aa 144-261. Identical to Q93EJ7  transposase from Francisella tularensis %28126 aa%29 from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF%27s. ORF1 %28identical to Q93EJ7%29 contains a programmed ribosomal frameshifting motif%2C 5%27-AAAAAAAG-3%27 at aa position 109 which permits frameshifting to ORF2 %28identical to Q93EJ6%29 to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family%2C and also mariner elements%2C show that this transposase shares strongly conserved residues%2C including a fully conserved dipeptide%2CAsp-Glu %28DE%29%2C and a block consisting of a fully conserved Asp and highly conserved Glu%2C separated by 34 or 35 residues %28D35E%29. The conserved dipeptide is only present if ribosomal frameshifting occurs.;Dbxref=UniProtKB%2FTrEMBL:Q5NIH2,Genbank:YP_169708.1,GeneID:3190809;gbkey=CDS;product=transposase;protein_id=YP_169708.1;transl_table=11
NC_006570.2	RefSeq	CDS	710737	711195	.	-	0	ID=cds624;Name=YP_169708.1;Parent=gene700;Note=ISFtu1. Transposase%2C member of the IS630 Tc-1 mariner family. Identical to Q93EJ6  transposase from Francisella tularensis %28118 aa%29 from aa 144-261. Identical to Q93EJ7  transposase from Francisella tularensis %28126 aa%29 from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF%27s. ORF1 %28identical to Q93EJ7%29 contains a programmed ribosomal frameshifting motif%2C 5%27-AAAAAAAG-3%27 at aa position 109 which permits frameshifting to ORF2 %28identical to Q93EJ6%29 to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family%2C and also mariner elements%2C show that this transposase shares strongly conserved residues%2C including a fully conserved dipeptide%2CAsp-Glu %28DE%29%2C and a block consisting of a fully conserved Asp and highly conserved Glu%2C separated by 34 or 35 residues %28D35E%29. The conserved dipeptide is only present if ribosomal frameshifting occurs.;Dbxref=UniProtKB%2FTrEMBL:Q5NIH2,Genbank:YP_169708.1,GeneID:3190809;gbkey=CDS;product=transposase;protein_id=YP_169708.1;transl_table=11
NC_006570.2	RefSeq	repeat_region	711542	711557	.	-	.	ID=id101;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	711558	711573	.	-	.	ID=id102;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	711574	711585	.	-	.	ID=id103;Note=ISFtu1 12bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	gene	711592	712416	.	-	.	ID=gene701;Name=mutM;Dbxref=GeneID:3192054;gbkey=Gene;gene=mutM;locus_tag=FTT_0693c
NC_006570.2	RefSeq	CDS	711592	712416	.	-	0	ID=cds625;Name=YP_169709.1;Parent=gene701;Note=Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases;Dbxref=GOA:Q5NGY3,InterPro:IPR015887,UniProtKB%2FSwiss-Prot:Q5NGY3,Genbank:YP_169709.1,GeneID:3192054;gbkey=CDS;product=formamidopyrimidine-DNA glycosylase;protein_id=YP_169709.1;transl_table=11
NC_006570.2	RefSeq	gene	712510	714609	.	+	.	ID=gene702;Name=FTT_0694;Dbxref=GeneID:3191030;gbkey=Gene;locus_tag=FTT_0694
NC_006570.2	RefSeq	CDS	712510	714609	.	+	0	ID=cds626;Name=YP_169710.1;Parent=gene702;Note=Similar to AAP18158 2-acyl-glycerophospho-ethanolamine acyltransferase%2Cacyl-acyl-carrier protein synthetase from Shigella flexneri %28719 aa%29. FASTA: opt: 735 Z-score: 862.5 E%28%29: 3.8e-40 Smith-Waterman score: 826%3B 33.661identity in 508 aa overlap. n. b. No match between aa 1 and 196. Several domains missing compared to AAP18158 ORF ftt0694;Dbxref=GOA:Q5NGY2,InterPro:IPR000873,UniProtKB%2FTrEMBL:Q5NGY2,Genbank:YP_169710.1,GeneID:3191030;gbkey=CDS;product=hypothetical protein;protein_id=YP_169710.1;transl_table=11
NC_006570.2	RefSeq	gene	714615	715532	.	+	.	ID=gene703;Name=mraW;Dbxref=GeneID:3191607;gbkey=Gene;gene=mraW;locus_tag=FTT_0695
NC_006570.2	RefSeq	CDS	714615	715532	.	+	0	ID=cds627;Name=YP_169711.1;Parent=gene703;Note=Similar to AAP95225 S-adenosyl-methyltransferase MraW from Haemophilus ducreyi %28313 aa%29. FASTA: opt: 918 Z-score: 1107.1 E%28%29: 8.9e-54 Smith-Waterman score: 918%3B 49.677identity in 310 aa overlap.;Dbxref=GOA:Q5NGY1,InterPro:IPR002903,UniProtKB%2FSwiss-Prot:Q5NGY1,Genbank:YP_169711.1,GeneID:3191607;gbkey=CDS;product=S-adenosyl-methyltransferase MraW;protein_id=YP_169711.1;transl_table=11
NC_006570.2	RefSeq	gene	715529	715879	.	+	.	ID=gene704;Name=FTT_0696;Dbxref=GeneID:3191028;gbkey=Gene;locus_tag=FTT_0696
NC_006570.2	RefSeq	CDS	715529	715879	.	+	0	ID=cds628;Name=YP_169712.1;Parent=gene704;Note=Weak similarity to cell division protein ftsL. ORF ftt0696;Dbxref=GOA:Q5NGY0,InterPro:IPR011922,UniProtKB%2FTrEMBL:Q5NGY0,Genbank:YP_169712.1,GeneID:3191028;gbkey=CDS;product=hypothetical protein;protein_id=YP_169712.1;transl_table=11
NC_006570.2	RefSeq	gene	715872	717566	.	+	.	ID=gene705;Name=ftsI;Dbxref=GeneID:3191383;gbkey=Gene;gene=ftsI;locus_tag=FTT_0697
NC_006570.2	RefSeq	CDS	715872	717566	.	+	0	ID=cds629;Name=YP_169713.1;Parent=gene705;Note=Similar to Q83F33 Penicillin-binding protein 3 from Coxiella burnetii %28548 aa%29. FASTA: opt: 1361 Z-score: 1597.9 E%28%29: 4.1e-81 Smith-Waterman score: 1361%3B 40.325 identity in 553 aa overlap.;Dbxref=GOA:Q5NGX9,InterPro:IPR005311,UniProtKB%2FTrEMBL:Q5NGX9,Genbank:YP_169713.1,GeneID:3191383;gbkey=CDS;product=penicillin binding protein %28peptidoglycan synthetase%29;protein_id=YP_169713.1;transl_table=11
NC_006570.2	RefSeq	gene	717672	717938	.	+	.	ID=gene706;Name=rpsO;Dbxref=GeneID:3191158;gbkey=Gene;gene=rpsO;locus_tag=FTT_0698
NC_006570.2	RefSeq	CDS	717672	717938	.	+	0	ID=cds630;Name=YP_169714.1;Parent=gene706;Note=primary rRNA binding protein%3B helps nucleate assembly of 30S%3B binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA%3B autoregulates translation through interactions with the mRNA leader sequence;Dbxref=GOA:Q5NGX8,InterPro:IPR009068,UniProtKB%2FSwiss-Prot:Q5NGX8,Genbank:YP_169714.1,GeneID:3191158;gbkey=CDS;product=30S ribosomal protein S15;protein_id=YP_169714.1;transl_table=11
NC_006570.2	RefSeq	gene	717995	720076	.	+	.	ID=gene707;Name=pnp;Dbxref=GeneID:3191115;gbkey=Gene;gene=pnp;locus_tag=FTT_0699
NC_006570.2	RefSeq	CDS	717995	720076	.	+	0	ID=cds631;Name=YP_169715.1;Parent=gene707;Note=Similar to Q83D87 Polyribonucleotide nucleotidyltransferase from Coxiella burnetii %28696 aa%29. FASTA: opt: 2437 Z-score: 2800.2 E%28%29: 4.4e-148 Smith-Waterman score: 2437%3B 54.401identity in 693 aa overlap.;Dbxref=GOA:Q5NGX7,InterPro:IPR018111,UniProtKB%2FSwiss-Prot:Q5NGX7,Genbank:YP_169715.1,GeneID:3191115;gbkey=CDS;product=polynucleotide phosphorylase;protein_id=YP_169715.1;transl_table=11
NC_006570.2	RefSeq	gene	720082	720432	.	+	.	ID=gene708;Name=FTT_0700;Dbxref=GeneID:3191027;gbkey=Gene;locus_tag=FTT_0700
NC_006570.2	RefSeq	CDS	720082	720432	.	+	0	ID=cds632;Name=YP_169716.1;Parent=gene708;Note=essential respiratory protein A%3B may be involved in the transfer of iron-sulfur clusters%3B essential for growth using oxygen or alternate electron acceptors;Dbxref=GOA:Q5NGX6,InterPro:IPR017870,UniProtKB%2FSwiss-Prot:Q5NGX6,Genbank:YP_169716.1,GeneID:3191027;gbkey=CDS;product=iron-sulfur cluster insertion protein ErpA;protein_id=YP_169716.1;transl_table=11
NC_006570.2	RefSeq	gene	720442	721290	.	+	.	ID=gene709;Name=kdsA;Dbxref=GeneID:3192149;gbkey=Gene;gene=kdsA;locus_tag=FTT_0701
NC_006570.2	RefSeq	CDS	720442	721290	.	+	0	ID=cds633;Name=YP_169717.1;Parent=gene709;Note=catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis;Dbxref=GOA:Q5NGX5,InterPro:IPR013785,UniProtKB%2FTrEMBL:Q5NGX5,Genbank:YP_169717.1,GeneID:3192149;gbkey=CDS;product=2-dehydro-3-deoxyphosphooctonate aldolase;protein_id=YP_169717.1;transl_table=11
NC_006570.2	RefSeq	gene	721301	721966	.	+	.	ID=gene710;Name=udk;Dbxref=GeneID:3192488;gbkey=Gene;gene=udk;locus_tag=FTT_0702
NC_006570.2	RefSeq	CDS	721301	721966	.	+	0	ID=cds634;Name=YP_169718.1;Parent=gene710;Note=functions in pyrimidine salvage%3B pyrimidine ribonucleoside kinase%3B phosphorylates nucleosides or dinucleosides to make UMP or CMP using ATP or GTP as the donor;Dbxref=GOA:Q5NGX4,InterPro:IPR006083,UniProtKB%2FTrEMBL:Q5NGX4,Genbank:YP_169718.1,GeneID:3192488;gbkey=CDS;product=uridine kinase;protein_id=YP_169718.1;transl_table=11
NC_006570.2	RefSeq	gene	721959	722177	.	+	.	ID=gene711;Name=rpoZ;Dbxref=GeneID:3191977;gbkey=Gene;gene=rpoZ;locus_tag=FTT_0703
NC_006570.2	RefSeq	CDS	721959	722177	.	+	0	ID=cds635;Name=YP_169719.1;Parent=gene711;Note=Similar to RPOZ_PSEPK %28Q88C82%29 Probable DNA-directed RNA polymerase omega chain from Pseudomonas putida %28strain KT2440%29 %2887 aa%29. FASTA: opt: 194 Z-score: 293.6 E%28%29: 1.8e-08 Smith-Waterman score: 194%3B 52.857 identity in 70 aa overlap.;Dbxref=GOA:Q5NGX3,InterPro:IPR006110,UniProtKB%2FSwiss-Prot:Q5NGX3,Genbank:YP_169719.1,GeneID:3191977;gbkey=CDS;product=DNA-directed RNA polymerase subunit omega;protein_id=YP_169719.1;transl_table=11
NC_006570.2	RefSeq	gene	722243	722315	.	+	.	ID=gene712;Name=tRNA-Val %28TAC%29;Dbxref=GeneID:3190978;description=tRNA-Val %28TAC%29;gbkey=Gene;gene=tRNA-Val %28TAC%29;locus_tag=FTT_t09
NC_006570.2	RefSeq	tRNA	722243	722315	.	+	.	ID=rna9;Dbxref=GeneID:3190978;codons=50;gbkey=tRNA;product=tRNA-Val
NC_006570.2	RefSeq	exon	722243	722315	.	+	.	ID=id104;Parent=rna9;Dbxref=GeneID:3190978;codons=50;gbkey=tRNA;product=tRNA-Val
NC_006570.2	RefSeq	gene	722442	723014	.	+	.	ID=gene713;Name=FTT_0704;Dbxref=GeneID:3191026;gbkey=Gene;locus_tag=FTT_0704
NC_006570.2	RefSeq	CDS	722442	723014	.	+	0	ID=cds636;Name=YP_169720.1;Parent=gene713;Note=ORF ftt0704;Dbxref=UniProtKB%2FTrEMBL:Q5NGX2,Genbank:YP_169720.1,GeneID:3191026;gbkey=CDS;product=hypothetical protein;protein_id=YP_169720.1;transl_table=11
NC_006570.2	RefSeq	gene	723103	724452	.	+	.	ID=gene714;Name=rumA;Dbxref=GeneID:3191516;gbkey=Gene;gene=rumA;locus_tag=FTT_0705
NC_006570.2	RefSeq	CDS	723103	724452	.	+	0	ID=cds637;Name=YP_169721.1;Parent=gene714;Note=in Escherichia coli this enzyme catalyzes the SAM-dependent methylation of U1939 in the 23S ribomal RNA%3B binds an iron-sulfur cluster %5B4Fe-4S%5D;Dbxref=GOA:Q5NGX1,InterPro:IPR010280,UniProtKB%2FSwiss-Prot:Q5NGX1,Genbank:YP_169721.1,GeneID:3191516;gbkey=CDS;product=23S rRNA 5-methyluridine methyltransferase;protein_id=YP_169721.1;transl_table=11
NC_006570.2	RefSeq	gene	724462	725393	.	+	.	ID=gene715;Name=glk2;Dbxref=GeneID:3190972;gbkey=Gene;gene=glk2;locus_tag=FTT_0706;pseudo=true
NC_006570.2	RefSeq	gene	725383	726177	.	+	.	ID=gene716;Name=FTT_0707;Dbxref=GeneID:3191025;gbkey=Gene;locus_tag=FTT_0707
NC_006570.2	RefSeq	CDS	725383	726177	.	+	0	ID=cds638;Name=YP_169722.1;Parent=gene716;Note=Similar to Q9CK00 Hypothetical protein PM1838 from Pasteurella multocida %28234 aa%29. FASTA: opt: 456 Z-score: 507.2 E%28%29: 2.3e-20 Smith-Waterman score: 456%3B 34.483identity in 232 aa overlap. ORF ftt0707;Dbxref=GOA:Q5NGX0,InterPro:IPR006419,UniProtKB%2FTrEMBL:Q5NGX0,Genbank:YP_169722.1,GeneID:3191025;gbkey=CDS;product=nicotinamide mononucleotide transport %28NMT%29 family protein;protein_id=YP_169722.1;transl_table=11
NC_006570.2	RefSeq	gene	726265	727518	.	+	.	ID=gene717;Name=FTT_0708;Dbxref=GeneID:3191024;gbkey=Gene;locus_tag=FTT_0708
NC_006570.2	RefSeq	CDS	726265	727518	.	+	0	ID=cds639;Name=YP_169723.1;Parent=gene717;Note=Similar to Q83BD8 Major facilitator family transporter from Coxiella burnetii %28411 aa%29. FASTA: opt: 868 Z-score: 941.6 E%28%29: 1.5e-44 Smith-Waterman score: 868%3B 37.912identity in 364 aa overlap. ORF ftt0708;Dbxref=InterPro:IPR011701,UniProtKB%2FTrEMBL:Q5NGW9,Genbank:YP_169723.1,GeneID:3191024;gbkey=CDS;product=major facilitator transporter;protein_id=YP_169723.1;transl_table=11
NC_006570.2	RefSeq	gene	727627	728997	.	+	.	ID=gene718;Name=eno;Dbxref=GeneID:3191859;gbkey=Gene;gene=eno;locus_tag=FTT_0709
NC_006570.2	RefSeq	CDS	727627	728997	.	+	0	ID=cds640;Name=YP_169724.1;Parent=gene718;Note=enolase%3B catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis;Dbxref=GOA:Q5NGW8,InterPro:IPR000941,UniProtKB%2FSwiss-Prot:Q5NGW8,Genbank:YP_169724.1,GeneID:3191859;gbkey=CDS;product=phosphopyruvate hydratase;protein_id=YP_169724.1;transl_table=11
NC_006570.2	RefSeq	gene	729005	729295	.	+	.	ID=gene719;Name=ftsB;Dbxref=GeneID:3191079;gbkey=Gene;gene=ftsB;locus_tag=FTT_0710
NC_006570.2	RefSeq	CDS	729005	729295	.	+	0	ID=cds641;Name=YP_169725.1;Parent=gene719;Note=Similar to FTSB_VIBPA %28Q87LQ1%29 Cell division protein ftsB homolog from Vibrio parahaemolyticus %2893 aa%29. FASTA: opt: 198 Z-score: 273.8 E%28%29: 2.3e-07 Smith-Waterman score: 198%3B 37.209 identity in 86 aa overlap.;Dbxref=GOA:Q5NGW7,InterPro:IPR007060,UniProtKB%2FTrEMBL:Q5NGW7,Genbank:YP_169725.1,GeneID:3191079;gbkey=CDS;product=cell division protein;protein_id=YP_169725.1;transl_table=11
NC_006570.2	RefSeq	gene	729285	729974	.	+	.	ID=gene720;Name=ispD;Dbxref=GeneID:3190877;gbkey=Gene;gene=ispD;locus_tag=FTT_0711
NC_006570.2	RefSeq	CDS	729285	729974	.	+	0	ID=cds642;Name=YP_169726.1;Parent=gene720;Note=Similar to ISPD_PASMU %28P57953%29 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase %28238 aa%29. FASTA: opt: 506 Z-score: 656.8 E%28%29: 1.1e-28 Smith-Waterman score: 506%3B 39.381 identity in 226 aa overlap.;Dbxref=GOA:Q5NGW6,InterPro:IPR001228,UniProtKB%2FTrEMBL:Q5NGW6,Genbank:YP_169726.1,GeneID:3190877;gbkey=CDS;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=YP_169726.1;transl_table=11
NC_006570.2	RefSeq	gene	729979	731241	.	-	.	ID=gene721;Name=sdaC1;Dbxref=GeneID:3192377;gbkey=Gene;gene=sdaC1;locus_tag=FTT_0712c
NC_006570.2	RefSeq	CDS	729979	731241	.	-	0	ID=cds643;Name=YP_169727.1;Parent=gene721;Note=Similar to SDAC_HAEIN %28P44615%29 Serine transporter from Haemophilus influenzae %28412 aa%29. FASTA: opt: 785 Z-score: 854.1 E%28%29: 1.1e-39 Smith-Waterman score: 785%3B 33.099 identity in 426 aa overlap.;Dbxref=UniProtKB%2FTrEMBL:Q5NGW5,Genbank:YP_169727.1,GeneID:3192377;gbkey=CDS;product=serine transporter;protein_id=YP_169727.1;transl_table=11
NC_006570.2	RefSeq	gene	731243	732298	.	-	.	ID=gene722;Name=tdh;Dbxref=GeneID:3190755;gbkey=Gene;gene=tdh;locus_tag=FTT_0713c
NC_006570.2	RefSeq	CDS	731243	732298	.	-	0	ID=cds644;Name=YP_169728.1;Parent=gene722;Note=converts threonine and NAD to 1%2C2-amino-3-oxobutanoate and NADH%3B functions in threonine catabolism;Dbxref=GOA:Q5NGW4,InterPro:IPR013154,UniProtKB%2FSwiss-Prot:Q5NGW4,Genbank:YP_169728.1,GeneID:3190755;gbkey=CDS;product=L-threonine 3-dehydrogenase;protein_id=YP_169728.1;transl_table=11
NC_006570.2	RefSeq	gene	732321	733517	.	-	.	ID=gene723;Name=kbl;Dbxref=GeneID:3192112;gbkey=Gene;gene=kbl;locus_tag=FTT_0714c
NC_006570.2	RefSeq	CDS	732321	733517	.	-	0	ID=cds645;Name=YP_169729.1;Parent=gene723;Note=catalyzes the formation of 2-amino-3-oxobutanoate from acetyl-CoA and glycine;Dbxref=GOA:Q5NGW3,InterPro:IPR015421,UniProtKB%2FTrEMBL:Q5NGW3,Genbank:YP_169729.1,GeneID:3192112;gbkey=CDS;product=2-amino-3-ketobutyrate CoA ligase;protein_id=YP_169729.1;transl_table=11
NC_006570.2	RefSeq	gene	734050	736332	.	+	.	ID=gene724;Name=FTT_0715;Dbxref=GeneID:3191020;gbkey=Gene;locus_tag=FTT_0715
NC_006570.2	RefSeq	CDS	734050	736332	.	+	0	ID=cds646;Name=YP_169730.1;Parent=gene724;Note=Similar to Q9ZIX2 Chitinase c from Pseudoalteromonas sp. S9 %28869 aa%29. FASTA: opt: 331 Z-score: 370.4 E%28%29: 9.6e-13 Smith-Waterman score: 583%3B 24.111 identity in 900 aa overlap. The homologs are of varying sizes. ORF ftt0715;Dbxref=GOA:Q5NGW2,InterPro:IPR013781,UniProtKB%2FTrEMBL:Q5NGW2,Genbank:YP_169730.1,GeneID:3191020;gbkey=CDS;product=chitinase;protein_id=YP_169730.1;transl_table=11
NC_006570.2	RefSeq	gene	736511	737155	.	+	.	ID=gene725;Name=upp;Dbxref=GeneID:3191905;gbkey=Gene;gene=upp;locus_tag=FTT_0716
NC_006570.2	RefSeq	CDS	736511	737155	.	+	0	ID=cds647;Name=YP_169731.1;Parent=gene725;Note=Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate;Dbxref=GOA:Q5NGW1,InterPro:IPR005765,UniProtKB%2FSwiss-Prot:Q5NGW1,Genbank:YP_169731.1,GeneID:3191905;gbkey=CDS;product=uracil phosphoribosyltransferase;protein_id=YP_169731.1;transl_table=11
NC_006570.2	RefSeq	gene	737240	738072	.	+	.	ID=gene726;Name=purU;Dbxref=GeneID:3191661;gbkey=Gene;gene=purU;locus_tag=FTT_0717;pseudo=true
NC_006570.2	RefSeq	gene	738163	738507	.	+	.	ID=gene727;Name=FTT_0718;Dbxref=GeneID:3191021;gbkey=Gene;locus_tag=FTT_0718
NC_006570.2	RefSeq	CDS	738163	738507	.	+	0	ID=cds648;Name=YP_169732.1;Parent=gene727;Note=ORF ftt0718;Dbxref=InterPro:IPR014347,UniProtKB%2FTrEMBL:Q5NGW0,Genbank:YP_169732.1,GeneID:3191021;gbkey=CDS;product=hypothetical protein;protein_id=YP_169732.1;transl_table=11
NC_006570.2	RefSeq	gene	738564	739787	.	+	.	ID=gene728;Name=FTT_0719;Dbxref=GeneID:3191018;gbkey=Gene;locus_tag=FTT_0719
NC_006570.2	RefSeq	CDS	738564	739787	.	+	0	ID=cds649;Name=YP_169733.1;Parent=gene728;Note=Aa 139-320 identical to AAP97846 Hypothetical protein %28Fragment%29 from Francisella tularensis ssp. tularensis strain SchuS4 %28184 aa%29. Similar to Q881T0 Proline%2Fbetaine transporter from Pseudomonas syringae %28pv. tomato%29 %28438 aa%29. FASTA: opt: 561 Z-score: 633.8 E%28%29: 2.1e-27 Smith-Waterman score: 561%3B 25.616 identity in 406 aa overlap. ORF ftt0719;Dbxref=InterPro:IPR011701,UniProtKB%2FTrEMBL:Q5NGV9,Genbank:YP_169733.1,GeneID:3191018;gbkey=CDS;product=major facilitator transporter;protein_id=YP_169733.1;transl_table=11
NC_006570.2	RefSeq	gene	739771	741096	.	-	.	ID=gene729;Name=dgt;Dbxref=GeneID:3191520;gbkey=Gene;gene=dgt;locus_tag=FTT_0720c
NC_006570.2	RefSeq	CDS	739771	741096	.	-	0	ID=cds650;Name=YP_169734.1;Parent=gene729;Note=Similar to DGT1_VIBPA %28Q87R73%29 Deoxyguanosinetriphosphate triphosphohydrolase-like protein from Vibrio parahaemolyticus %28440 aa%29. FASTA: opt: 587 Z-score: 683.8 E%28%29: 3.4e-30 Smith-Waterman score: 661%3B 33.781identity in 447 aa overlap.;Dbxref=GOA:Q5NGV8,InterPro:IPR006674,UniProtKB%2FTrEMBL:Q5NGV8,Genbank:YP_169734.1,GeneID:3191520;gbkey=CDS;product=deoxyguanosinetriphosphate triphosphohydrolase;protein_id=YP_169734.1;transl_table=11
NC_006570.2	RefSeq	gene	741200	743425	.	-	.	ID=gene730;Name=katG;Dbxref=GeneID:3192098;gbkey=Gene;gene=katG;locus_tag=FTT_0721c
NC_006570.2	RefSeq	CDS	741200	743425	.	-	0	ID=cds651;Name=YP_169735.1;Parent=gene730;Note=Similar to CATA_YERPE %28Q9X6B0%29 Peroxidase%2Fcatalase %28EC 1.11.1.6%29 from Yersinia pestis %28737 aa%29. FASTA: opt: 3041 Z-score: 3508.0 E%28%29: 1.7e-187 Smith-Waterman score: 3041%3B 59.189 identity in 740 aa overlap.;Dbxref=GOA:Q5NGV7,InterPro:IPR019794,UniProtKB%2FSwiss-Prot:Q5NGV7,Genbank:YP_169735.1,GeneID:3192098;gbkey=CDS;product=peroxidase%2Fcatalase;protein_id=YP_169735.1;transl_table=11
NC_006570.2	RefSeq	repeat_region	744190	744201	.	-	.	ID=id105;Note=ISFtu1 12bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	gene	744289	745073	.	-	.	ID=gene731;Name=isftu1;Dbxref=GeneID:3191796;gbkey=Gene;gene=isftu1;locus_tag=FTT_0722c
NC_006570.2	RefSeq	CDS	744747	745073	.	-	0	ID=cds652;Name=YP_169736.1;Parent=gene731;Note=ISFtu1. Transposase%2C member of the IS630 Tc-1 mariner family. Identical to Q93EJ6  transposase from Francisella tularensis %28118 aa%29 from aa 144-261. Identical to Q93EJ7  transposase from Francisella tularensis %28126 aa%29 from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF%27s. ORF1 %28identical to Q93EJ7%29 contains a programmed ribosomal frameshifting motif%2C 5%27-AAAAAAAG-3%27 at aa position 109 which permits frameshifting to ORF2 %28identical to Q93EJ6%29 to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family%2C and also mariner elements%2C show that this transposase shares strongly conserved residues%2C including a fully conserved dipeptide%2CAsp-Glu %28DE%29%2C and a block consisting of a fully conserved Asp and highly conserved Glu%2C separated by 34 or 35 residues %28D35E%29. The conserved dipeptide is only present if ribosomal frameshifting occurs.;Dbxref=UniProtKB%2FTrEMBL:Q5NIH2,Genbank:YP_169736.1,GeneID:3191796;gbkey=CDS;product=transposase;protein_id=YP_169736.1;transl_table=11
NC_006570.2	RefSeq	CDS	744289	744747	.	-	0	ID=cds652;Name=YP_169736.1;Parent=gene731;Note=ISFtu1. Transposase%2C member of the IS630 Tc-1 mariner family. Identical to Q93EJ6  transposase from Francisella tularensis %28118 aa%29 from aa 144-261. Identical to Q93EJ7  transposase from Francisella tularensis %28126 aa%29 from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF%27s. ORF1 %28identical to Q93EJ7%29 contains a programmed ribosomal frameshifting motif%2C 5%27-AAAAAAAG-3%27 at aa position 109 which permits frameshifting to ORF2 %28identical to Q93EJ6%29 to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family%2C and also mariner elements%2C show that this transposase shares strongly conserved residues%2C including a fully conserved dipeptide%2CAsp-Glu %28DE%29%2C and a block consisting of a fully conserved Asp and highly conserved Glu%2C separated by 34 or 35 residues %28D35E%29. The conserved dipeptide is only present if ribosomal frameshifting occurs.;Dbxref=UniProtKB%2FTrEMBL:Q5NIH2,Genbank:YP_169736.1,GeneID:3191796;gbkey=CDS;product=transposase;protein_id=YP_169736.1;transl_table=11
NC_006570.2	RefSeq	repeat_region	745094	745109	.	-	.	ID=id106;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	745110	745125	.	-	.	ID=id107;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	745126	745137	.	-	.	ID=id108;Note=ISFtu1 12bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	gene	745380	746168	.	-	.	ID=gene732;Name=FTT_0723c;Dbxref=GeneID:3191019;gbkey=Gene;locus_tag=FTT_0723c
NC_006570.2	RefSeq	CDS	745380	746168	.	-	0	ID=cds653;Name=YP_169737.1;Parent=gene732;Note=Similar to Q88H18 Oxidoreductase%2C short chain dehydrogenase%2Freductase family Pseudomonas putida %28strain KT2440%29 %28248 aa%29. FASTA: opt: 792 Z-score: 881.9 E%28%29: 3.1e-41 Smith-Waterman score: 792%3B 47.984 identity in 248 aa overlap. ORF ftt0723c;Dbxref=GOA:Q5NGV5,InterPro:IPR016040,UniProtKB%2FTrEMBL:Q5NGV5,Genbank:YP_169737.1,GeneID:3191019;gbkey=CDS;product=short-chain dehydrogenase;protein_id=YP_169737.1;transl_table=11
NC_006570.2	RefSeq	gene	746162	747555	.	-	.	ID=gene733;Name=dacB2;Dbxref=GeneID:3191496;gbkey=Gene;gene=dacB2;locus_tag=FTT_0724c;pseudo=true
NC_006570.2	RefSeq	gene	747571	748887	.	-	.	ID=gene734;Name=glpT;Dbxref=GeneID:3190969;gbkey=Gene;gene=glpT;locus_tag=FTT_0725c
NC_006570.2	RefSeq	CDS	747571	748887	.	-	0	ID=cds654;Name=YP_169738.1;Parent=gene734;Note=Similar to Q81V41 Glycerol-3-phosphate transporter from Bacillus anthracis %28strain Ames%29 %28449 aa%29. FASTA: opt: 1382 Z-score: 1521.3 E%28%29: 7.6e-77 Smith-Waterman score: 1382%3B 48.268identity in 433 aa overlap.;Dbxref=InterPro:IPR011701,UniProtKB%2FTrEMBL:Q5NGV4,Genbank:YP_169738.1,GeneID:3190969;gbkey=CDS;product=glycerol-3-phosphate transporter;protein_id=YP_169738.1;transl_table=11
NC_006570.2	RefSeq	gene	748994	750028	.	-	.	ID=gene735;Name=FTT_0726c;Dbxref=GeneID:3191017;gbkey=Gene;locus_tag=FTT_0726c
NC_006570.2	RefSeq	CDS	748994	750028	.	-	0	ID=cds655;Name=YP_169739.1;Parent=gene735;Note=Similar to Q89FW5 Blr6584 protein from Bradyrhizobium japonicum %28342 aa%29. FASTA: opt: 636 Z-score: 743.1 E%28%29: 1.7e-33 Smith-Waterman score: 743%3B 36.336identity in 333 aa overlap. ORF ftt0726c;Dbxref=GOA:Q5NGV3,InterPro:IPR017946,UniProtKB%2FTrEMBL:Q5NGV3,Genbank:YP_169739.1,GeneID:3191017;gbkey=CDS;product=glycerophosphoryl diester phosphodiesterase family protein;protein_id=YP_169739.1;transl_table=11
NC_006570.2	RefSeq	gene	750166	750846	.	+	.	ID=gene736;Name=FTT_0727;Dbxref=GeneID:3191016;gbkey=Gene;locus_tag=FTT_0727
NC_006570.2	RefSeq	CDS	750166	750846	.	+	0	ID=cds656;Name=YP_169740.1;Parent=gene736;Note=Similar to Q83FA0 Lipoprotein%2C  from Coxiella burnetii %28326 aa%29. FASTA: opt: 255 Z-score: 290.7 E%28%29: 2.7e-08 Smith-Waterman score: 255%3B 26.606 identity in 218 aa overlap. n. b. The ORF is 100 aa shorter than all homologs %28C-term%29. ORF ftt0727;Dbxref=GOA:Q5NGV2,InterPro:IPR006143,UniProtKB%2FTrEMBL:Q5NGV2,Genbank:YP_169740.1,GeneID:3191016;gbkey=CDS;product=hypothetical protein;protein_id=YP_169740.1;transl_table=11
NC_006570.2	RefSeq	gene	751119	752051	.	+	.	ID=gene737;Name=ybhF;Dbxref=GeneID:3192154;gbkey=Gene;gene=ybhF;locus_tag=FTT_0728
NC_006570.2	RefSeq	CDS	751119	752051	.	+	0	ID=cds657;Name=YP_169741.1;Parent=gene737;Note=Similar to Q89II5 ABC transporter ATP-binding protein %28310 aa%29. FASTA: opt: 1060 Z-score: 1223.8 E%28%29: 2.8e-60 Smith-Waterman score: 1060%3B 54.605 identity in 304 aa overlap.;Dbxref=GOA:Q5NGV1,InterPro:IPR017871,UniProtKB%2FTrEMBL:Q5NGV1,Genbank:YP_169741.1,GeneID:3192154;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=YP_169741.1;transl_table=11
NC_006570.2	RefSeq	gene	752048	753166	.	+	.	ID=gene738;Name=ybhR;Dbxref=GeneID:3192155;gbkey=Gene;gene=ybhR;locus_tag=FTT_0729
NC_006570.2	RefSeq	CDS	752048	753166	.	+	0	ID=cds658;Name=YP_169742.1;Parent=gene738;Note=Similar to Q8Y316 Probable transmembrane protein from Ralstonia solanacearum %28Pseudomonas solanacearum%29 %28381 aa%29. FASTA: opt: 1138 Z-score: 1260.3 E%28%29: 2.6e-62 Smith-Waterman score: 1138%3B 45.722 identity in 374 aa overlap.;Dbxref=GOA:Q5NGV0,InterPro:IPR013525,UniProtKB%2FTrEMBL:Q5NGV0,Genbank:YP_169742.1,GeneID:3192155;gbkey=CDS;product=ABC transporter membrane protein;protein_id=YP_169742.1;transl_table=11
NC_006570.2	RefSeq	repeat_region	753169	753187	.	+	.	ID=id109;Note=ISFtu2 19bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	gene	753264	754007	.	+	.	ID=gene739;Name=isftu2;Dbxref=GeneID:3190910;gbkey=Gene;gene=isftu2;locus_tag=FTT_0730
NC_006570.2	RefSeq	CDS	753264	754007	.	+	0	ID=cds659;Name=YP_169743.1;Parent=gene739;Note=ISFtu2. Transposase%2C member of the IS5 family. Identical to Q8GM03  transposase from Francisella tularensis %28247 aa%29.;Dbxref=GOA:Q8GM03,InterPro:IPR002559,UniProtKB%2FTrEMBL:Q8GM03,Genbank:YP_169743.1,GeneID:3190910;gbkey=CDS;product=transposase;protein_id=YP_169743.1;transl_table=11
NC_006570.2	RefSeq	repeat_region	754015	754033	.	+	.	ID=id110;Note=ISFtu2 19bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	gene	754247	754693	.	-	.	ID=gene740;Name=FTT_0731c;Dbxref=GeneID:3191015;gbkey=Gene;locus_tag=FTT_0731c
NC_006570.2	RefSeq	CDS	754247	754693	.	-	0	ID=cds660;Name=YP_169744.1;Parent=gene740;Note=ORF ftt0731c;Dbxref=UniProtKB%2FTrEMBL:Q5NGU8,Genbank:YP_169744.1,GeneID:3191015;gbkey=CDS;product=hypothetical protein;protein_id=YP_169744.1;transl_table=11
NC_006570.2	RefSeq	gene	754790	755137	.	+	.	ID=gene741;Name=FTT_0732;Dbxref=GeneID:3192185;gbkey=Gene;locus_tag=FTT_0732
NC_006570.2	RefSeq	CDS	754790	755137	.	+	0	ID=cds661;Name=YP_169745.1;Parent=gene741;Note=ORF ftt0732;Dbxref=GOA:Q5NGU7,InterPro:IPR002701,UniProtKB%2FTrEMBL:Q5NGU7,Genbank:YP_169745.1,GeneID:3192185;gbkey=CDS;product=hypothetical protein;protein_id=YP_169745.1;transl_table=11
NC_006570.2	RefSeq	gene	755166	755636	.	+	.	ID=gene742;Name=FTT_0733;Dbxref=GeneID:3192183;gbkey=Gene;locus_tag=FTT_0733
NC_006570.2	RefSeq	CDS	755166	755636	.	+	0	ID=cds662;Name=YP_169746.1;Parent=gene742;Note=Similar to Q9A7J3 Glutathione peroxidase from Caulobacter crescentus %28160 aa%29. FASTA: opt: 605 Z-score: 801.1 E%28%29: 9.9e-37 Smith-Waterman score: 605%3B 55.696 identity in 158 aa overlap. ORF ftt0733;Dbxref=GOA:Q5NGU6,InterPro:IPR012335,UniProtKB%2FTrEMBL:Q5NGU6,Genbank:YP_169746.1,GeneID:3192183;gbkey=CDS;product=glutathione peroxidase;protein_id=YP_169746.1;transl_table=11
NC_006570.2	RefSeq	gene	755678	756844	.	+	.	ID=gene743;Name=FTT_0734;Dbxref=GeneID:3192182;gbkey=Gene;locus_tag=FTT_0734;pseudo=true
NC_006570.2	RefSeq	gene	756841	757911	.	+	.	ID=gene744;Name=FTT_0735;Dbxref=GeneID:3192181;gbkey=Gene;locus_tag=FTT_0735;pseudo=true
NC_006570.2	RefSeq	gene	757924	758571	.	+	.	ID=gene745;Name=FTT_0736;Dbxref=GeneID:3192180;gbkey=Gene;locus_tag=FTT_0736
NC_006570.2	RefSeq	CDS	757924	758571	.	+	0	ID=cds663;Name=YP_169747.1;Parent=gene745;Note=Similar to Q8REM4 Hypothetical protein FN1075 %28215 aa%29. FASTA: opt: 221 Z-score: 288.5 E%28%29: 3.5e-08 Smith-Waterman score: 221%3B 25.463identity in 216 aa overlap. ORF ftt0736;Dbxref=InterPro:IPR007751,UniProtKB%2FTrEMBL:Q5NGU5,Genbank:YP_169747.1,GeneID:3192180;gbkey=CDS;product=hypothetical protein;protein_id=YP_169747.1;transl_table=11
NC_006570.2	RefSeq	gene	758582	758710	.	-	.	ID=gene746;Name=FTT_0737c;Dbxref=GeneID:3192178;gbkey=Gene;locus_tag=FTT_0737c
NC_006570.2	RefSeq	CDS	758582	758710	.	-	0	ID=cds664;Name=YP_169748.1;Parent=gene746;Note=ORF ftt0737c;Dbxref=UniProtKB%2FTrEMBL:Q5NGU4,Genbank:YP_169748.1,GeneID:3192178;gbkey=CDS;product=hypothetical protein;protein_id=YP_169748.1;transl_table=11
NC_006570.2	RefSeq	gene	758878	760422	.	+	.	ID=gene747;Name=yjeF;Dbxref=GeneID:3192390;gbkey=Gene;gene=yjeF;locus_tag=FTT_0738
NC_006570.2	RefSeq	CDS	758878	760422	.	+	0	ID=cds665;Name=YP_169749.1;Parent=gene747;Note=Similar to Q82Y67 Possible sugar kinase from Nitrosomonas europaea %28505 aa%29. FASTA: Z-score: 922.3 E%28%29: 1.8e-43 Smith-Waterman score: 856%3B 35.529 identity in 501 aa overlap.;Dbxref=GOA:Q5NGU3,InterPro:IPR017953,UniProtKB%2FTrEMBL:Q5NGU3,Genbank:YP_169749.1,GeneID:3192390;gbkey=CDS;product=carbohydrate kinase family protein %28YjeF-related protein%29;protein_id=YP_169749.1;transl_table=11
NC_006570.2	RefSeq	gene	760406	760774	.	-	.	ID=gene748;Name=hslR;Dbxref=GeneID:3190937;gbkey=Gene;gene=hslR;locus_tag=FTT_0739c
NC_006570.2	RefSeq	CDS	760406	760774	.	-	0	ID=cds666;Name=YP_169750.1;Parent=gene748;Note=Similar to Q88AZ6 Heat shock protein 15 from Pseudomonas syringae %28pv. tomato%29 %28135 aa%29. FASTA: Z-score: 549.3 E%28%29: 1.1e-22 Smith-Waterman score: 447%3B 58.824 identity in 119 aa overlap.;Dbxref=GOA:Q5NGU2,InterPro:IPR002942,UniProtKB%2FTrEMBL:Q5NGU2,Genbank:YP_169750.1,GeneID:3190937;gbkey=CDS;product=heat shock protein 15 %28HSP15%29;protein_id=YP_169750.1;transl_table=11
NC_006570.2	RefSeq	gene	761178	763343	.	-	.	ID=gene749;Name=ostA2;Dbxref=GeneID:3191221;gbkey=Gene;gene=ostA2;locus_tag=FTT_0740c
NC_006570.2	RefSeq	CDS	761178	763343	.	-	0	ID=cds667;Name=YP_169751.1;Parent=gene749;Note=Similar to OSTA_XYLFT %28Q87AI9%29 Organic solvent tolerance protein from Xylella fastidiosa %28strain Temecula1 %2F ATCC 700964%29 %28792 aa%29. FASTA: opt: 653 Z-score: 763.8 E%28%29: 1.2e-34 Smith-Waterman score: 678%3B 24.212 identity in 698 aa overlap.;Dbxref=GOA:Q5NGU1,InterPro:IPR007543,UniProtKB%2FTrEMBL:Q5NGU1,Genbank:YP_169751.1,GeneID:3191221;gbkey=CDS;product=organic solvent tolerance protein;protein_id=YP_169751.1;transl_table=11
NC_006570.2	RefSeq	gene	763365	763595	.	-	.	ID=gene750;Name=FTT_0741c;Dbxref=GeneID:3192177;gbkey=Gene;locus_tag=FTT_0741c
NC_006570.2	RefSeq	CDS	763365	763595	.	-	0	ID=cds668;Name=YP_169752.1;Parent=gene750;Note=ORF ftt0741c;Dbxref=UniProtKB%2FTrEMBL:Q5NGU0,Genbank:YP_169752.1,GeneID:3192177;gbkey=CDS;product=hypothetical protein;protein_id=YP_169752.1;transl_table=11
NC_006570.2	RefSeq	gene	763903	765891	.	+	.	ID=gene751;Name=FTT_0742;Dbxref=GeneID:3192174;gbkey=Gene;locus_tag=FTT_0742
NC_006570.2	RefSeq	CDS	763903	765891	.	+	0	ID=cds669;Name=YP_169753.1;Parent=gene751;Note=ORF ftt0742;Dbxref=UniProtKB%2FTrEMBL:Q5NGT9,Genbank:YP_169753.1,GeneID:3192174;gbkey=CDS;product=lipoprotein;protein_id=YP_169753.1;transl_table=11
NC_006570.2	RefSeq	gene	766572	767387	.	+	.	ID=gene752;Name=FTT_0743;Dbxref=GeneID:3192172;gbkey=Gene;locus_tag=FTT_0743
NC_006570.2	RefSeq	CDS	766572	767387	.	+	0	ID=cds670;Name=YP_169754.1;Parent=gene752;Note=Similar to Q87Q96 Conserved hypothetical protein from Vibrio parahaemolyticus %28274 aa%29. FASTA: opt: 950 Z-score: 1132.9 E%28%29: 3.3e-55 Smith-Waterman score: 950%3B 49.259 identity in 270 aa overlap. ORF ftt0743;Dbxref=UniProtKB%2FTrEMBL:Q5NGT8,Genbank:YP_169754.1,GeneID:3192172;gbkey=CDS;product=hypothetical protein;protein_id=YP_169754.1;transl_table=11
NC_006570.2	RefSeq	gene	767486	767905	.	-	.	ID=gene753;Name=FTT_0744c;Dbxref=GeneID:3191856;gbkey=Gene;locus_tag=FTT_0744c
NC_006570.2	RefSeq	CDS	767486	767905	.	-	0	ID=cds671;Name=YP_169755.1;Parent=gene753;Note=ORF ftt0744c;Dbxref=UniProtKB%2FTrEMBL:Q5NGT7,Genbank:YP_169755.1,GeneID:3191856;gbkey=CDS;product=hypothetical protein;protein_id=YP_169755.1;transl_table=11
NC_006570.2	RefSeq	gene	767927	768283	.	-	.	ID=gene754;Name=FTT_0745c;Dbxref=GeneID:3192169;gbkey=Gene;locus_tag=FTT_0745c
NC_006570.2	RefSeq	CDS	767927	768283	.	-	0	ID=cds672;Name=YP_169756.1;Parent=gene754;Note=ORF ftt0745c;Dbxref=InterPro:IPR006726,UniProtKB%2FTrEMBL:Q5NGT6,Genbank:YP_169756.1,GeneID:3192169;gbkey=CDS;product=hypothetical protein;protein_id=YP_169756.1;transl_table=11
NC_006570.2	RefSeq	gene	768381	769172	.	-	.	ID=gene755;Name=FTT_0746c;Dbxref=GeneID:3191855;gbkey=Gene;locus_tag=FTT_0746c
NC_006570.2	RefSeq	CDS	768381	769172	.	-	0	ID=cds673;Name=YP_169757.1;Parent=gene755;Note=Similar to Q88NQ5 Membrane protein%2C  from Pseudomonas putida %28strain KT2440%29 %28662 aa%29. FASTA: opt: 267 Z-score: 319.4 E%28%29: 6.8e-10 Smith-Waterman score: 269%3B 27.179 identity in 195 aa overlap. ORF ftt0746c;Dbxref=UniProtKB%2FTrEMBL:Q5NGT5,Genbank:YP_169757.1,GeneID:3191855;gbkey=CDS;product=hypothetical protein;protein_id=YP_169757.1;transl_table=11
NC_006570.2	RefSeq	gene	769162	769947	.	-	.	ID=gene756;Name=FTT_0747c;Dbxref=GeneID:3191854;gbkey=Gene;locus_tag=FTT_0747c
NC_006570.2	RefSeq	CDS	769162	769947	.	-	0	ID=cds674;Name=YP_169758.1;Parent=gene756;Note=Similar to Q88NQ3 Membrane fusion protein%2C %28289 aa%29. FASTA: opt: 721 Z-score: 853.4 E%28%29: 1.2e-39 Smith-Waterman score: 721%3B 41.434identity in 251 aa overlap. Similar to ydhJ and yhcQ in E. coli. ORF ftt0747c;Dbxref=GOA:Q5NGT4,InterPro:IPR006143,UniProtKB%2FTrEMBL:Q5NGT4,Genbank:YP_169758.1,GeneID:3191854;gbkey=CDS;product=hypothetical protein;protein_id=YP_169758.1;transl_table=11
NC_006570.2	RefSeq	gene	770327	771046	.	+	.	ID=gene757;Name=FTT_0748;Dbxref=GeneID:3191851;gbkey=Gene;locus_tag=FTT_0748
NC_006570.2	RefSeq	CDS	770327	771046	.	+	0	ID=cds675;Name=YP_169759.1;Parent=gene757;Note=Similar to Q93PU6  regulatory protein TtgV from Pseudomonas putida %28259 aa%29. FASTA: opt: 485 Z-score: 588.0 E%28%29: 7.4e-25 Smith-Waterman score: 485%3B 33.473 identity in 239 aa overlap. ORF ftt0748;Dbxref=GOA:Q5NGT3,InterPro:IPR014757,UniProtKB%2FTrEMBL:Q5NGT3,Genbank:YP_169759.1,GeneID:3191851;gbkey=CDS;product=hypothetical protein;protein_id=YP_169759.1;transl_table=11
NC_006570.2	RefSeq	gene	771106	772092	.	-	.	ID=gene758;Name=FTT_0749c;Dbxref=GeneID:3191849;gbkey=Gene;locus_tag=FTT_0749c
NC_006570.2	RefSeq	CDS	771106	772092	.	-	0	ID=cds676;Name=YP_169760.1;Parent=gene758;Note=Aa 8-183 identical to AAP97845 Hypothetical protein %28Fragment%29 from Francisella tularensis ssp. tularensis strain SchuS4 %28176 aa%29. Similar to Q8CL71 Hypothetical from Yersinia pestis %28311 aa%29. FASTA: opt: 842 Z-score: 992.9 E%28%29: 2e-47 Smith-Waterman score: 842%3B 44.710 identity in 293 aa overlap ORF ftt0749c;Dbxref=GOA:Q5NGT2,InterPro:IPR013094,UniProtKB%2FTrEMBL:Q5NGT2,Genbank:YP_169760.1,GeneID:3191849;gbkey=CDS;product=hypothetical protein;protein_id=YP_169760.1;transl_table=11
NC_006570.2	RefSeq	gene	772298	773284	.	+	.	ID=gene759;Name=FTT_0750;Dbxref=GeneID:3191848;gbkey=Gene;locus_tag=FTT_0750
NC_006570.2	RefSeq	CDS	772298	773284	.	+	0	ID=cds677;Name=YP_169761.1;Parent=gene759;Note=Similar to Q83AM1 Radical SAM domain protein from Coxiella burnetii %28342 aa%29. FASTA: opt: 1094 Z-score: 1304.2 E%28%29: 9.4e-65 Smith-Waterman score: 1094%3B 48.930 identity in 327 aa overlap. ORF ftt0750;Dbxref=GOA:Q5NGT1,InterPro:IPR007197,UniProtKB%2FTrEMBL:Q5NGT1,Genbank:YP_169761.1,GeneID:3191848;gbkey=CDS;product=hypothetical protein;protein_id=YP_169761.1;transl_table=11
NC_006570.2	RefSeq	gene	773355	773558	.	-	.	ID=gene760;Name=cspA;Dbxref=GeneID:3191900;gbkey=Gene;gene=cspA;locus_tag=FTT_0751c
NC_006570.2	RefSeq	CDS	773355	773558	.	-	0	ID=cds678;Name=YP_169762.1;Parent=gene760;Note=Similar to Q89UH2 Cold shock protein from Bradyrhizobium japonicum %2870 aa%29. FASTA: opt: 297 Z-score: 443.7 E%28%29: 8e-17 Smith-Waterman score: 297%3B 66.176 identity in 68 aa overlap.;Dbxref=GOA:Q5NGT0,InterPro:IPR012340,UniProtKB%2FTrEMBL:Q5NGT0,Genbank:YP_169762.1,GeneID:3191900;gbkey=CDS;product=cold shock protein;protein_id=YP_169762.1;transl_table=11
NC_006570.2	RefSeq	gene	773757	773954	.	-	.	ID=gene761;Name=FTT_0752c;Dbxref=GeneID:3191847;gbkey=Gene;locus_tag=FTT_0752c
NC_006570.2	RefSeq	CDS	773757	773954	.	-	0	ID=cds679;Name=YP_169763.1;Parent=gene761;Note=ORF ftt0752c;Dbxref=UniProtKB%2FTrEMBL:Q5NGS9,Genbank:YP_169763.1,GeneID:3191847;gbkey=CDS;product=hypothetical protein;protein_id=YP_169763.1;transl_table=11
NC_006570.2	RefSeq	gene	774330	774530	.	+	.	ID=gene762;Name=rpsU;Dbxref=GeneID:3191263;gbkey=Gene;gene=rpsU;locus_tag=FTT_0753
NC_006570.2	RefSeq	CDS	774330	774530	.	+	0	ID=cds680;Name=YP_169764.1;Parent=gene762;Note=a small basic protein that is one of the last in the subunit assembly%3B omission does not prevent assembly but the subunit is inactive%3B binds central domain of 16S rRNA;Dbxref=GOA:Q5NGS8,InterPro:IPR018278,UniProtKB%2FSwiss-Prot:Q5NGS8,Genbank:YP_169764.1,GeneID:3191263;gbkey=CDS;product=30S ribosomal protein S21;protein_id=YP_169764.1;transl_table=11
NC_006570.2	RefSeq	gene	774588	774767	.	-	.	ID=gene763;Name=FTT_0754c;Dbxref=GeneID:3191844;gbkey=Gene;locus_tag=FTT_0754c
NC_006570.2	RefSeq	CDS	774588	774767	.	-	0	ID=cds681;Name=YP_169765.1;Parent=gene763;Note=ORF ftt0754c;Dbxref=UniProtKB%2FTrEMBL:Q5NGS7,Genbank:YP_169765.1,GeneID:3191844;gbkey=CDS;product=hypothetical protein;protein_id=YP_169765.1;transl_table=11
NC_006570.2	RefSeq	gene	774956	775040	.	-	.	ID=gene764;Name=tRNA-Ser %28TGA%29;Dbxref=GeneID:3192276;description=tRNA-Ser %28TGA%29;gbkey=Gene;gene=tRNA-Ser %28TGA%29;locus_tag=FTT_t10
NC_006570.2	RefSeq	tRNA	774956	775040	.	-	.	ID=rna10;Dbxref=GeneID:3192276;codons=6;gbkey=tRNA;product=tRNA-Ser
NC_006570.2	RefSeq	exon	774956	775040	.	-	.	ID=id111;Parent=rna10;Dbxref=GeneID:3192276;codons=6;gbkey=tRNA;product=tRNA-Ser
NC_006570.2	RefSeq	gene	775183	775677	.	+	.	ID=gene765;Name=FTT_0755;Dbxref=GeneID:3191846;gbkey=Gene;locus_tag=FTT_0755
NC_006570.2	RefSeq	CDS	775183	775677	.	+	0	ID=cds682;Name=YP_169766.1;Parent=gene765;Note=ORF ftt0755;Dbxref=UniProtKB%2FTrEMBL:Q5NGS6,Genbank:YP_169766.1,GeneID:3191846;gbkey=CDS;product=hypothetical protein;protein_id=YP_169766.1;transl_table=11
NC_006570.2	RefSeq	gene	775768	776907	.	+	.	ID=gene766;Name=FTT_0756;Dbxref=GeneID:3191842;gbkey=Gene;locus_tag=FTT_0756
NC_006570.2	RefSeq	CDS	775768	776907	.	+	0	ID=cds683;Name=YP_169767.1;Parent=gene766;Note=Similar to Q83BX5 Cation-efflux family protein from Coxiella burnetii %28378 aa%29. FASTA: opt: 773 Z-score: 908.9 E%28%29: 9.8e-43 Smith-Waterman score: 774%3B 34.605 identity in 367 aa overlap. ORF ftt0756;Dbxref=GOA:Q5NGS5,InterPro:IPR002524,UniProtKB%2FTrEMBL:Q5NGS5,Genbank:YP_169767.1,GeneID:3191842;gbkey=CDS;product=cation-efflux family protein;protein_id=YP_169767.1;transl_table=11
NC_006570.2	RefSeq	gene	776924	777787	.	+	.	ID=gene767;Name=galU;Dbxref=GeneID:3191600;gbkey=Gene;gene=galU;locus_tag=FTT_0757
NC_006570.2	RefSeq	CDS	776924	777787	.	+	0	ID=cds684;Name=YP_169768.1;Parent=gene767;Note=Similar to Q9K0G7 UTP--glucose-1-phosphate uridylyltransferase from Neisseria meningitidis %28serogroup B%29 %28289 aa%29. FASTA: opt: 1017 Z-score: 1291.1 E%28%29: 5e-64 Smith-Waterman score: 1017%3B 57.439 identity in 289 aa overlap.;Dbxref=GOA:Q5NGS4,InterPro:IPR005835,UniProtKB%2FTrEMBL:Q5NGS4,Genbank:YP_169768.1,GeneID:3191600;gbkey=CDS;product=UTP-glucose-1-phosphate uridylyltransferase;protein_id=YP_169768.1;transl_table=11
NC_006570.2	RefSeq	gene	777909	779248	.	+	.	ID=gene768;Name=acs;Dbxref=GeneID:3192401;gbkey=Gene;gene=acs;locus_tag=FTT_0758;pseudo=true
NC_006570.2	RefSeq	gene	779260	780177	.	+	.	ID=gene769;Name=FTT_0759;Dbxref=GeneID:3191841;gbkey=Gene;locus_tag=FTT_0759
NC_006570.2	RefSeq	CDS	779260	780177	.	+	0	ID=cds685;Name=YP_169769.1;Parent=gene769;Note=Similar to YYAM_BACSU %28P37511%29 Hypothetical transport protein yyaM from Bacillus subtilis %28305 aa%29. FASTA: opt: 402 Z-score: 452.6 E%28%29: 2.6e-17 Smith-Waterman score: 402%3B 25.614 identity in 285 aa overlap. ORF ftt0759;Dbxref=GOA:Q5NGS3,InterPro:IPR000620,UniProtKB%2FTrEMBL:Q5NGS3,Genbank:YP_169769.1,GeneID:3191841;gbkey=CDS;product=hypothetical protein;protein_id=YP_169769.1;transl_table=11
NC_006570.2	RefSeq	gene	780180	780386	.	-	.	ID=gene770;Name=FTT_0760c;Dbxref=GeneID:3191837;gbkey=Gene;locus_tag=FTT_0760c
NC_006570.2	RefSeq	CDS	780180	780386	.	-	0	ID=cds686;Name=YP_169770.1;Parent=gene770;Note=ORF ftt0760c;Dbxref=UniProtKB%2FTrEMBL:Q5NGS2,Genbank:YP_169770.1,GeneID:3191837;gbkey=CDS;product=lipoprotein;protein_id=YP_169770.1;transl_table=11
NC_006570.2	RefSeq	gene	780471	780764	.	-	.	ID=gene771;Name=FTT_0761c;Dbxref=GeneID:3191840;gbkey=Gene;locus_tag=FTT_0761c
NC_006570.2	RefSeq	CDS	780471	780764	.	-	0	ID=cds687;Name=YP_169771.1;Parent=gene771;Note=ORF ftt0761c;Dbxref=UniProtKB%2FTrEMBL:Q5NGS1,Genbank:YP_169771.1,GeneID:3191840;gbkey=CDS;product=hypothetical protein;protein_id=YP_169771.1;transl_table=11
NC_006570.2	RefSeq	gene	780786	781835	.	-	.	ID=gene772;Name=recF;Dbxref=GeneID:3191639;gbkey=Gene;gene=recF;locus_tag=FTT_0762c
NC_006570.2	RefSeq	CDS	780786	781835	.	-	0	ID=cds688;Name=YP_169772.1;Parent=gene772;Note=Similar to RECF_PROMI %28P22839%29 DNA replication and repair protein from Proteus mirabilis %28362 aa%29. FASTA: opt: 874 Z-score: 1010.7 E%28%29: 2.1e-48 Smith-Waterman score: 874%3B 37.394 identity in 353 aa overlap.;Dbxref=GOA:Q5NGS0,InterPro:IPR018078,UniProtKB%2FTrEMBL:Q5NGS0,Genbank:YP_169772.1,GeneID:3191639;gbkey=CDS;product=DNA replication and repair protein RecF;protein_id=YP_169772.1;transl_table=11
NC_006570.2	RefSeq	gene	781839	782585	.	-	.	ID=gene773;Name=yjjV;Dbxref=GeneID:3192399;gbkey=Gene;gene=yjjV;locus_tag=FTT_0763c
NC_006570.2	RefSeq	CDS	781839	782585	.	-	0	ID=cds689;Name=YP_169773.1;Parent=gene773;Note=Similar to YJJV_ECOLI %28P39408%29  deoxyribonuclease yjjV %28259 aa%29. FASTA: opt: 503 Z-score: 595.3 E%28%29: 2.9e-25 Smith-Waterman score: 503%3B 31.048 identity in 248 aa overlap.;Dbxref=GOA:Q5NGR9,InterPro:IPR018228,UniProtKB%2FTrEMBL:Q5NGR9,Genbank:YP_169773.1,GeneID:3192399;gbkey=CDS;product=TatD related DNAse family protein;protein_id=YP_169773.1;transl_table=11
NC_006570.2	RefSeq	gene	782778	784862	.	+	.	ID=gene774;Name=glyS;Dbxref=GeneID:3191775;gbkey=Gene;gene=glyS;locus_tag=FTT_0764
NC_006570.2	RefSeq	CDS	782778	784862	.	+	0	ID=cds690;Name=YP_169774.1;Parent=gene774;Note=Similar to SYGB_COXBU %28P45651%29 Glycyl-tRNA synthetase beta chain from Coxiella burnetii %28689 aa%29. FASTA: opt: 1810 Z-score: 2108.8 E%28%29: 1.4e-109 Smith-Waterman score: 1810%3B 42.939 identity in 694 aa overlap.;Dbxref=GOA:Q5NGR8,InterPro:IPR015944,UniProtKB%2FTrEMBL:Q5NGR8,Genbank:YP_169774.1,GeneID:3191775;gbkey=CDS;product=glycyl-tRNA synthetase subunit beta;protein_id=YP_169774.1;transl_table=11
NC_006570.2	RefSeq	repeat_region	784938	784949	.	+	.	ID=id112;Note=ISFtu1 12bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	784950	784965	.	+	.	ID=id113;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	784966	784981	.	+	.	ID=id114;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;gbkey=repeat_region
NC_006570.2	RefSeq	gene	785002	785786	.	+	.	ID=gene775;Name=isftu1;Dbxref=GeneID:3190913;gbkey=Gene;gene=isftu1;locus_tag=FTT_0765
NC_006570.2	RefSeq	CDS	785002	785328	.	+	0	ID=cds691;Name=YP_169775.1;Parent=gene775;Note=ISFtu1. Transposase%2C member of the IS630 Tc-1 mariner family. Identical to Q93EJ6  transposase from Francisella tularensis %28118 aa%29 from aa 144-261. Identical to Q93EJ7  transposase from Francisella tularensis %28126 aa%29 from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF%27s. ORF1 %28identical to Q93EJ7%29 contains a programmed ribosomal frameshifting motif%2C 5%27-AAAAAAAG-3%27 at aa position 109 which permits frameshifting to ORF2 %28identical to Q93EJ6%29 to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family%2C and also mariner elements%2C show that this transposase shares strongly conserved residues%2C including a fully conserved dipeptide%2CAsp-Glu %28DE%29%2C and a block consisting of a fully conserved Asp and highly conserved Glu%2C separated by 34 or 35 residues %28D35E%29. The conserved dipeptide is only present if ribosomal frameshifting occurs.;Dbxref=UniProtKB%2FTrEMBL:Q5NIH2,Genbank:YP_169775.1,GeneID:3190913;gbkey=CDS;product=transposase;protein_id=YP_169775.1;transl_table=11
NC_006570.2	RefSeq	CDS	785328	785786	.	+	0	ID=cds691;Name=YP_169775.1;Parent=gene775;Note=ISFtu1. Transposase%2C member of the IS630 Tc-1 mariner family. Identical to Q93EJ6  transposase from Francisella tularensis %28118 aa%29 from aa 144-261. Identical to Q93EJ7  transposase from Francisella tularensis %28126 aa%29 from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF%27s. ORF1 %28identical to Q93EJ7%29 contains a programmed ribosomal frameshifting motif%2C 5%27-AAAAAAAG-3%27 at aa position 109 which permits frameshifting to ORF2 %28identical to Q93EJ6%29 to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family%2C and also mariner elements%2C show that this transposase shares strongly conserved residues%2C including a fully conserved dipeptide%2CAsp-Glu %28DE%29%2C and a block consisting of a fully conserved Asp and highly conserved Glu%2C separated by 34 or 35 residues %28D35E%29. The conserved dipeptide is only present if ribosomal frameshifting occurs.;Dbxref=UniProtKB%2FTrEMBL:Q5NIH2,Genbank:YP_169775.1,GeneID:3190913;gbkey=CDS;product=transposase;protein_id=YP_169775.1;transl_table=11
NC_006570.2	RefSeq	repeat_region	785874	785885	.	+	.	ID=id115;Note=ISFtu1 12bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	gene	785955	786677	.	+	.	ID=gene776;Name=deoD;Dbxref=GeneID:3191517;gbkey=Gene;gene=deoD;locus_tag=FTT_0766
NC_006570.2	RefSeq	CDS	785955	786677	.	+	0	ID=cds692;Name=YP_169776.1;Parent=gene776;Note=Similar to Q9PQL0 Purine-nucleoside phosphorylase from Ureaplasma parvum %28Ureaplasma urealyticum biotype 1%29 %28239 aa%29. FASTA: opt: 697 Z-score: 837.2 E%28%29: 9.7e-39 Smith-Waterman score: 697%3B 47.534 identity in 223 aa overlap.;Dbxref=GOA:Q5NGR6,InterPro:IPR018017,UniProtKB%2FTrEMBL:Q5NGR6,Genbank:YP_169776.1,GeneID:3191517;gbkey=CDS;product=purine nucleoside phosphorylase;protein_id=YP_169776.1;transl_table=11
NC_006570.2	RefSeq	gene	786674	787123	.	-	.	ID=gene777;Name=FTT_0767c;Dbxref=GeneID:3191838;gbkey=Gene;locus_tag=FTT_0767c
NC_006570.2	RefSeq	CDS	786674	787123	.	-	0	ID=cds693;Name=YP_169777.1;Parent=gene777;Note=ORF ftt0767c;Dbxref=UniProtKB%2FTrEMBL:Q5NGR5,Genbank:YP_169777.1,GeneID:3191838;gbkey=CDS;product=hypothetical protein;protein_id=YP_169777.1;transl_table=11
NC_006570.2	RefSeq	gene	787127	788155	.	-	.	ID=gene778;Name=FTT_0768c;Dbxref=GeneID:3191836;gbkey=Gene;locus_tag=FTT_0768c
NC_006570.2	RefSeq	CDS	787127	788155	.	-	0	ID=cds694;Name=YP_169778.1;Parent=gene778;Note=ORF ftt0768c;Dbxref=UniProtKB%2FTrEMBL:Q5NGR4,Genbank:YP_169778.1,GeneID:3191836;gbkey=CDS;product=hypothetical protein;protein_id=YP_169778.1;transl_table=11
NC_006570.2	RefSeq	gene	788287	791007	.	+	.	ID=gene779;Name=secA;Dbxref=GeneID:3192077;gbkey=Gene;gene=secA;locus_tag=FTT_0769
NC_006570.2	RefSeq	CDS	788287	791007	.	+	0	ID=cds695;Name=YP_169779.1;Parent=gene779;Note=functions in protein export%3B can interact with acidic membrane phospholipids and the SecYEG protein complex%3B binds to preproteins%3B binds to ATP and undergoes a conformational change to promote membrane insertion of SecA%2Fbound preprotein%3B ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane%3B additional proteins SecD%2FF%2FYajC aid SecA recycling%3B exists in an equilibrium between monomers and dimers%3B may possibly form higher order oligomers%3B proteins in this cluster correspond SecA1%3B SecA2 is not essential and seems to play a role in secretion of a subset of proteins;Dbxref=GOA:Q5NGR3,InterPro:IPR014018,UniProtKB%2FSwiss-Prot:Q5NGR3,Genbank:YP_169779.1,GeneID:3192077;gbkey=CDS;product=preprotein translocase subunit SecA;protein_id=YP_169779.1;transl_table=11
NC_006570.2	RefSeq	gene	791117	791683	.	+	.	ID=gene780;Name=tag;Dbxref=GeneID:3190750;gbkey=Gene;gene=tag;locus_tag=FTT_0770;pseudo=true
NC_006570.2	RefSeq	gene	791675	792805	.	-	.	ID=gene781;Name=glxK;Dbxref=GeneID:3190908;gbkey=Gene;gene=glxK;locus_tag=FTT_0771c;pseudo=true
NC_006570.2	RefSeq	gene	793076	793390	.	+	.	ID=gene782;Name=rplU;Dbxref=GeneID:3192001;gbkey=Gene;gene=rplU;locus_tag=FTT_0772
NC_006570.2	RefSeq	CDS	793076	793390	.	+	0	ID=cds696;Name=YP_169780.1;Parent=gene782;Note=Similar to AAP95195 50S ribosomal protein L21 from Haemophilus ducreyi %28103 aa%29. FASTA: opt: 435 Z-score: 570.3 E%28%29: 7.1e-24 Smith-Waterman score: 435%3B 66.019 identity in 103 aa overlap.;Dbxref=GOA:Q5NGR2,InterPro:IPR018258,UniProtKB%2FSwiss-Prot:Q5NGR2,Genbank:YP_169780.1,GeneID:3192001;gbkey=CDS;product=50S ribosomal protein L21;protein_id=YP_169780.1;transl_table=11
NC_006570.2	RefSeq	gene	793421	793675	.	+	.	ID=gene783;Name=rpmA;Dbxref=GeneID:3191996;gbkey=Gene;gene=rpmA;locus_tag=FTT_0773
NC_006570.2	RefSeq	CDS	793421	793675	.	+	0	ID=cds697;Name=YP_169781.1;Parent=gene783;Note=involved in the peptidyltransferase reaction during translation;Dbxref=GOA:Q5NGR1,InterPro:IPR018261,UniProtKB%2FSwiss-Prot:Q5NGR1,Genbank:YP_169781.1,GeneID:3191996;gbkey=CDS;product=50S ribosomal protein L27;protein_id=YP_169781.1;transl_table=11
NC_006570.2	RefSeq	gene	794062	794439	.	+	.	ID=gene784;Name=FTT_0774;Dbxref=GeneID:3191834;gbkey=Gene;locus_tag=FTT_0774
NC_006570.2	RefSeq	CDS	794062	794439	.	+	0	ID=cds698;Name=YP_169782.1;Parent=gene784;Note=Similar to Q8DJY4 Tll1086 protein from Synechococcus elongatus %28Thermosynechococcus elongatus%29 %28126 aa%29. FASTA: opt: 516 Z-score: 715.9 E%28%29: 5.5e-32 Smith-Waterman score: 516%3B 64.348 identity in 115 aa overlap. ORF ftt0774;Dbxref=InterPro:IPR018714,UniProtKB%2FTrEMBL:Q5NGR0,Genbank:YP_169782.1,GeneID:3191834;gbkey=CDS;product=hypothetical protein;protein_id=YP_169782.1;transl_table=11
NC_006570.2	RefSeq	gene	794436	795646	.	-	.	ID=gene785;Name=bcr2;Dbxref=GeneID:3191771;gbkey=Gene;gene=bcr2;locus_tag=FTT_0775c;pseudo=true
NC_006570.2	RefSeq	gene	795675	796769	.	-	.	ID=gene786;Name=rnd;Dbxref=GeneID:3191611;gbkey=Gene;gene=rnd;locus_tag=FTT_0776c
NC_006570.2	RefSeq	CDS	795675	796769	.	-	0	ID=cds699;Name=YP_169783.1;Parent=gene786;Note=Similar to Q8YGF6 Ribonuclease D from Brucella melitensis %28385 aa%29. FASTA: opt: 538 Z-score: 584.5 E%28%29: 1.2e-24 Smith-Waterman score: 538%3B 28.919 identity in 370 aa overlap.;Dbxref=GOA:Q5NGQ9,InterPro:IPR002562,UniProtKB%2FTrEMBL:Q5NGQ9,Genbank:YP_169783.1,GeneID:3191611;gbkey=CDS;product=ribonuclease D;protein_id=YP_169783.1;transl_table=11
NC_006570.2	RefSeq	gene	796878	798716	.	+	.	ID=gene787;Name=uvrC;Dbxref=GeneID:3191927;gbkey=Gene;gene=uvrC;locus_tag=FTT_0777
NC_006570.2	RefSeq	CDS	796878	798716	.	+	0	ID=cds700;Name=YP_169784.1;Parent=gene787;Note=The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5%27 and 3%27 sides of the lesion. The N-terminal half is responsible for the 3%27 incision and the C-terminal half is responsible for the 5%27 incision;Dbxref=GOA:Q5NGQ8,InterPro:IPR004791,UniProtKB%2FSwiss-Prot:Q5NGQ8,Genbank:YP_169784.1,GeneID:3191927;gbkey=CDS;product=excinuclease ABC subunit C;protein_id=YP_169784.1;transl_table=11
NC_006570.2	RefSeq	gene	798783	799157	.	+	.	ID=gene788;Name=FTT_0778;Dbxref=GeneID:3192437;gbkey=Gene;locus_tag=FTT_0778
NC_006570.2	RefSeq	CDS	798783	799157	.	+	0	ID=cds701;Name=YP_169785.1;Parent=gene788;Note=ORF ftt0778;Dbxref=UniProtKB%2FTrEMBL:Q5NGQ7,Genbank:YP_169785.1,GeneID:3192437;gbkey=CDS;product=hypothetical protein;protein_id=YP_169785.1;transl_table=11
NC_006570.2	RefSeq	repeat_region	799171	799182	.	+	.	ID=id116;Note=ISFtu1 12bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	799183	799198	.	+	.	ID=id117;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	799199	799214	.	+	.	ID=id118;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;gbkey=repeat_region
NC_006570.2	RefSeq	gene	799235	800019	.	+	.	ID=gene789;Name=isftu1;Dbxref=GeneID:3190822;gbkey=Gene;gene=isftu1;locus_tag=FTT_0779
NC_006570.2	RefSeq	CDS	799235	799561	.	+	0	ID=cds702;Name=YP_169786.1;Parent=gene789;Note=ISFtu1. Transposase%2C member of the IS630 Tc-1 mariner family. Identical to Q93EJ6  transposase from Francisella tularensis %28118 aa%29 from aa 144-261. Identical to Q93EJ7  transposase from Francisella tularensis %28126 aa%29 from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF%27s. ORF1 %28identical to Q93EJ7%29 contains a programmed ribosomal frameshifting motif%2C 5%27-AAAAAAAG-3%27 at aa position 109 which permits frameshifting to ORF2 %28identical to Q93EJ6%29 to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family%2C and also mariner elements%2C show that this transposase shares strongly conserved residues%2C including a fully conserved dipeptide%2CAsp-Glu %28DE%29%2C and a block consisting of a fully conserved Asp and highly conserved Glu%2C separated by 34 or 35 residues %28D35E%29. The conserved dipeptide is only present if ribosomal frameshifting occurs.;Dbxref=UniProtKB%2FTrEMBL:Q5NIH2,Genbank:YP_169786.1,GeneID:3190822;gbkey=CDS;product=transposase;protein_id=YP_169786.1;transl_table=11
NC_006570.2	RefSeq	CDS	799561	800019	.	+	0	ID=cds702;Name=YP_169786.1;Parent=gene789;Note=ISFtu1. Transposase%2C member of the IS630 Tc-1 mariner family. Identical to Q93EJ6  transposase from Francisella tularensis %28118 aa%29 from aa 144-261. Identical to Q93EJ7  transposase from Francisella tularensis %28126 aa%29 from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF%27s. ORF1 %28identical to Q93EJ7%29 contains a programmed ribosomal frameshifting motif%2C 5%27-AAAAAAAG-3%27 at aa position 109 which permits frameshifting to ORF2 %28identical to Q93EJ6%29 to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family%2C and also mariner elements%2C show that this transposase shares strongly conserved residues%2C including a fully conserved dipeptide%2CAsp-Glu %28DE%29%2C and a block consisting of a fully conserved Asp and highly conserved Glu%2C separated by 34 or 35 residues %28D35E%29. The conserved dipeptide is only present if ribosomal frameshifting occurs.;Dbxref=UniProtKB%2FTrEMBL:Q5NIH2,Genbank:YP_169786.1,GeneID:3190822;gbkey=CDS;product=transposase;protein_id=YP_169786.1;transl_table=11
NC_006570.2	RefSeq	repeat_region	800107	800118	.	+	.	ID=id119;Note=ISFtu1 12bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	gene	800295	800564	.	-	.	ID=gene790;Name=FTT_0780c;Dbxref=GeneID:3192438;gbkey=Gene;locus_tag=FTT_0780c
NC_006570.2	RefSeq	CDS	800295	800564	.	-	0	ID=cds703;Name=YP_169787.1;Parent=gene790;Note=ORF ftt0780c;Dbxref=UniProtKB%2FTrEMBL:Q5NGQ5,Genbank:YP_169787.1,GeneID:3192438;gbkey=CDS;product=hypothetical protein;protein_id=YP_169787.1;transl_table=11
NC_006570.2	RefSeq	gene	800554	801267	.	-	.	ID=gene791;Name=FTT_0781c;Dbxref=GeneID:3191831;gbkey=Gene;locus_tag=FTT_0781c
NC_006570.2	RefSeq	CDS	800554	801267	.	-	0	ID=cds704;Name=YP_169788.1;Parent=gene791;Note=Similar to Q82UL5 Hypothetical protein from Nitrosomonas europaea %28239 aa%29. FASTA: opt: 736 Z-score: 920.8 E%28%29: 2.1e-43 Smith-Waterman score: 736%3B 54.680 identity in 203 aa overlap. The family of possible lysine decarboxylase proteins shares a highly conserved motif PGGXGTXXE that is probably functionally important. This protein has that motif. ORF ftt0781c;Dbxref=InterPro:IPR005269,UniProtKB%2FTrEMBL:Q5NGQ4,Genbank:YP_169788.1,GeneID:3191831;gbkey=CDS;product=hypothetical protein;protein_id=YP_169788.1;transl_table=11
NC_006570.2	RefSeq	gene	801553	802335	.	+	.	ID=gene792;Name=fabI;Dbxref=GeneID:3191864;gbkey=Gene;gene=fabI;locus_tag=FTT_0782
NC_006570.2	RefSeq	CDS	801553	802335	.	+	0	ID=cds705;Name=YP_169789.1;Parent=gene792;Note=Similar to Q87YS1 Enoyl-%28acyl-carrier-protein%29 reductase from Pseudomonas syringae %28pv. tomato%29 %28264 aa%29. FASTA: opt: 1071 Z-score: 1313.1 E%28%29: 3e-65 Smith-Waterman score: 1071%3B 62.595 identity in 262 aa overlap.;Dbxref=GOA:Q5NGQ3,InterPro:IPR016040,UniProtKB%2FTrEMBL:Q5NGQ3,Genbank:YP_169789.1,GeneID:3191864;gbkey=CDS;product=enoyl-ACP reductase;protein_id=YP_169789.1;transl_table=11
NC_006570.2	RefSeq	gene	802482	803444	.	+	.	ID=gene793;Name=ars;Dbxref=GeneID:3190951;gbkey=Gene;gene=ars;locus_tag=FTT_0783
NC_006570.2	RefSeq	CDS	802482	803444	.	+	0	ID=cds706;Name=YP_169790.1;Parent=gene793;Note=Similar to Q9CPJ8 Arylsulfatase from Pasteurella multocida %28327 aa%29. FASTA: opt: 544 Z-score: 669.4 E%28%29: 2.2e-29 Smith-Waterman score: 544%3B 31.420 identity in 331 aa overlap.;Dbxref=GOA:Q5NGQ2,InterPro:IPR001279,UniProtKB%2FTrEMBL:Q5NGQ2,Genbank:YP_169790.1,GeneID:3190951;gbkey=CDS;product=arylsulfatase;protein_id=YP_169790.1;transl_table=11
NC_006570.2	RefSeq	gene	803456	803785	.	+	.	ID=gene794;Name=FTT_0784;Dbxref=GeneID:3191824;gbkey=Gene;locus_tag=FTT_0784
NC_006570.2	RefSeq	CDS	803456	803785	.	+	0	ID=cds707;Name=YP_169791.1;Parent=gene794;Note=ORF ftt0784;Dbxref=UniProtKB%2FTrEMBL:Q5NGQ1,Genbank:YP_169791.1,GeneID:3191824;gbkey=CDS;product=hypothetical protein;protein_id=YP_169791.1;transl_table=11
NC_006570.2	RefSeq	gene	803773	804594	.	+	.	ID=gene795;Name=FTT_0785;Dbxref=GeneID:3191822;gbkey=Gene;locus_tag=FTT_0785
NC_006570.2	RefSeq	CDS	803773	804594	.	+	0	ID=cds708;Name=YP_169792.1;Parent=gene795;Note=Similar to Q88K93 Conserved hypothetical protein %28277 aa%29. FASTA: opt: 718 Z-score: 855.8 E%28%29: 8.9e-40 Smith-Waterman score: 718%3B 42.308identity in 260 aa overlap. ORF ftt0785;Dbxref=InterPro:IPR007801,UniProtKB%2FTrEMBL:Q5NGQ0,Genbank:YP_169792.1,GeneID:3191822;gbkey=CDS;product=hypothetical protein;protein_id=YP_169792.1;transl_table=11
NC_006570.2	RefSeq	gene	804591	805289	.	+	.	ID=gene796;Name=FTT_0786;Dbxref=GeneID:3191821;gbkey=Gene;locus_tag=FTT_0786
NC_006570.2	RefSeq	CDS	804591	805289	.	+	0	ID=cds709;Name=YP_169793.1;Parent=gene796;Note=ORF ftt0786;Dbxref=InterPro:IPR018640,UniProtKB%2FTrEMBL:Q5NGP9,Genbank:YP_169793.1,GeneID:3191821;gbkey=CDS;product=hypothetical protein;protein_id=YP_169793.1;transl_table=11
NC_006570.2	RefSeq	gene	805300	805890	.	+	.	ID=gene797;Name=FTT_0787;Dbxref=GeneID:3191820;gbkey=Gene;locus_tag=FTT_0787
NC_006570.2	RefSeq	CDS	805300	805890	.	+	0	ID=cds710;Name=YP_169794.1;Parent=gene797;Note=Similar to Q8EDN3 Conserved hypothetical protein from Shewanella oneidensis %28197 aa%29. FASTA: opt: 435 Z-score: 540.9 E%28%29: 3.1e-22 Smith-Waterman score: 435%3B 42.935 identity in 184 aa overlap. ORF ftt0787;Dbxref=InterPro:IPR011637,UniProtKB%2FTrEMBL:Q5NGP8,Genbank:YP_169794.1,GeneID:3191820;gbkey=CDS;product=DoxD-like family protein;protein_id=YP_169794.1;transl_table=11
NC_006570.2	RefSeq	gene	805894	806877	.	-	.	ID=gene798;Name=kdsD;Dbxref=GeneID:3192129;gbkey=Gene;gene=kdsD;locus_tag=FTT_0788c
NC_006570.2	RefSeq	CDS	805894	806877	.	-	0	ID=cds711;Name=YP_169795.1;Parent=gene798;Note=Similar to Q8KLW6 Hypothetical protein from Pseudomonas stutzeri %28Pseudomonas perfectomarina%29 %28324 aa%29. FASTA: opt: 1095 Z-score: 1307.1 E%28%29: 6.5e-65 Smith-Waterman score: 1095%3B 54.489 identity in 323 aa overlap. Homologs are involved in sialic acid capsule biosynthesis in some pathogenic strains of Escherichia coli.;Dbxref=GOA:Q5NGP7,InterPro:IPR004800,UniProtKB%2FTrEMBL:Q5NGP7,Genbank:YP_169795.1,GeneID:3192129;gbkey=CDS;product=arabinose phosphate isomerase;protein_id=YP_169795.1;transl_table=11
NC_006570.2	RefSeq	gene	807002	807670	.	+	.	ID=gene799;Name=rpe;Dbxref=GeneID:3192026;gbkey=Gene;gene=rpe;locus_tag=FTT_0789
NC_006570.2	RefSeq	CDS	807002	807670	.	+	0	ID=cds712;Name=YP_169796.1;Parent=gene799;Note=Similar to Q8EK14 Ribulose-phosphate 3-epimerase %28225 aa%29. FASTA: opt: 953 Z-score: 1164.4 E%28%29: 5.8e-57 Smith-Waterman score: 953%3B 65.766identity in 222 aa overlap.;Dbxref=GOA:Q5NGP6,InterPro:IPR013785,UniProtKB%2FTrEMBL:Q5NGP6,Genbank:YP_169796.1,GeneID:3192026;gbkey=CDS;product=D-ribulose-phosphate 3-epimerase;protein_id=YP_169796.1;transl_table=11
NC_006570.2	RefSeq	gene	807651	809045	.	+	.	ID=gene800;Name=FTT_0790;Dbxref=GeneID:3191819;gbkey=Gene;locus_tag=FTT_0790
NC_006570.2	RefSeq	CDS	807651	809045	.	+	0	ID=cds713;Name=YP_169797.1;Parent=gene800;Note=Similar to Q9FDJ5  glycosyltransferase from Lactobacillus rhamnosus %28466 aa%29. FASTA: opt: 733 Z-score: 876.0 E%28%29: 6.7e-41 Smith-Waterman score: 733%3B 33.333 identity in 399 aa overlap. ORF ftt0790;Dbxref=GOA:Q5NGP5,InterPro:IPR017475,UniProtKB%2FTrEMBL:Q5NGP5,Genbank:YP_169797.1,GeneID:3191819;gbkey=CDS;product=sugar transferase;protein_id=YP_169797.1;transl_table=11
NC_006570.2	RefSeq	gene	809038	810057	.	+	.	ID=gene801;Name=galE;Dbxref=GeneID:3191584;gbkey=Gene;gene=galE;locus_tag=FTT_0791
NC_006570.2	RefSeq	CDS	809038	810057	.	+	0	ID=cds714;Name=YP_169798.1;Parent=gene801;Dbxref=GOA:Q8G8U0,HSSP:1EK6,InterPro:IPR016040,UniProtKB%2FTrEMBL:Q8G8U0,Genbank:YP_169798.1,GeneID:3191584;gbkey=CDS;product=UDP-glucose 4-epimerase;protein_id=YP_169798.1;transl_table=11
NC_006570.2	RefSeq	gene	810061	811290	.	+	.	ID=gene802;Name=FTT_0792;Dbxref=GeneID:3191845;gbkey=Gene;locus_tag=FTT_0792
NC_006570.2	RefSeq	CDS	810061	811290	.	+	0	ID=cds715;Name=YP_169799.1;Parent=gene802;Note=Similar to Q9HTC0 Glycosyltransferase WbpZ from Pseudomonas aeruginosa %28381 aa%29. FASTA: opt: 621 Z-score: 721.7 E%28%29: 2.6e-32 Smith-Waterman score: 1019%3B 38.725 identity in 408 aa overlap. ORF ftt0792;Dbxref=GOA:Q5NGP3,InterPro:IPR001296,UniProtKB%2FTrEMBL:Q5NGP3,Genbank:YP_169799.1,GeneID:3191845;gbkey=CDS;product=glycosyl transferase family protein;protein_id=YP_169799.1;transl_table=11
NC_006570.2	RefSeq	gene	811287	812969	.	+	.	ID=gene803;Name=FTT_0793;Dbxref=GeneID:3191818;gbkey=Gene;locus_tag=FTT_0793
NC_006570.2	RefSeq	CDS	811287	812969	.	+	0	ID=cds716;Name=YP_169800.1;Parent=gene803;Note=Similar to Q8DMA7 ATP-binding protein of ABC transporter from Synechococcus elongatus %28Thermosynechococcus elongatus%29 %28610 aa%29. FASTA: opt: 1084 Z-score: 1105.1 E%28%29: 1.2e-53 Smith-Waterman score: 1084%3B 35.159 identity in 566 aa overlap. ORF ftt0793;Dbxref=GOA:Q5NGP2,InterPro:IPR017940,UniProtKB%2FTrEMBL:Q5NGP2,Genbank:YP_169800.1,GeneID:3191818;gbkey=CDS;product=ABC transporter ATP-binding and membrane protein;protein_id=YP_169800.1;transl_table=11
NC_006570.2	RefSeq	gene	812983	814269	.	+	.	ID=gene804;Name=FTT_0794;Dbxref=GeneID:3191816;gbkey=Gene;locus_tag=FTT_0794
NC_006570.2	RefSeq	CDS	812983	814269	.	+	0	ID=cds717;Name=YP_169801.1;Parent=gene804;Note=Similar to AAP76675 Phosphoserine phosphatase from Helicobacter hepaticus %28199 aa%29. FASTA: opt: 751 Z-score: 908.2 E%28%29: 1.1e-42 Smith-Waterman score: 751%3B 55.385 identity in 195 aa overlap %2818-212:4-198%29 AND to AAP76674 Hypothetical protein from Helicobacter hepaticus %28213 aa%29. FASTA: opt: 823 Z-score: 994.3 E%28%29: 1.7e-47 Smith-Waterman score: 823%3B 57.212 identity in 208 aa overlap %28221-428:6-213%29. Seems to be two genes in some organisms. ORF ftt0794;Dbxref=GOA:Q5NGP1,InterPro:IPR006383,UniProtKB%2FTrEMBL:Q5NGP1,Genbank:YP_169801.1,GeneID:3191816;gbkey=CDS;product=hypothetical protein;protein_id=YP_169801.1;transl_table=11
NC_006570.2	RefSeq	gene	814208	814891	.	+	.	ID=gene805;Name=FTT_0795;Dbxref=GeneID:3191817;gbkey=Gene;locus_tag=FTT_0795
NC_006570.2	RefSeq	CDS	814208	814891	.	+	0	ID=cds718;Name=YP_169802.1;Parent=gene805;Note=Similar to AAP76671 Hypothetical protein cfa from Helicobacter hepaticus %28210 aa%29. FASTA: opt: 627 Z-score: 745.4 E%28%29: 1.3e-33 Smith-Waterman score: 627%3B 44.660 identity in 206 aa overlap. ORF ftt0795;Dbxref=InterPro:IPR013217,UniProtKB%2FTrEMBL:Q5NGP0,Genbank:YP_169802.1,GeneID:3191817;gbkey=CDS;product=hypothetical protein;protein_id=YP_169802.1;transl_table=11
NC_006570.2	RefSeq	gene	814895	815656	.	+	.	ID=gene806;Name=FTT_0796;Dbxref=GeneID:3191828;gbkey=Gene;locus_tag=FTT_0796
NC_006570.2	RefSeq	CDS	814895	815656	.	+	0	ID=cds719;Name=YP_169803.1;Parent=gene806;Note=ORF ftt0796;Dbxref=InterPro:IPR007074,UniProtKB%2FTrEMBL:Q5NGN9,Genbank:YP_169803.1,GeneID:3191828;gbkey=CDS;product=hypothetical protein;protein_id=YP_169803.1;transl_table=11
NC_006570.2	RefSeq	gene	815665	816624	.	+	.	ID=gene807;Name=FTT_0797;Dbxref=GeneID:3191827;gbkey=Gene;locus_tag=FTT_0797
NC_006570.2	RefSeq	CDS	815665	816624	.	+	0	ID=cds720;Name=YP_169804.1;Parent=gene807;Note=Similar to O85000 Galactosyl transferase from Streptococcus pneumoniae %28323 aa%29. FASTA: opt: 577 Z-score: 682.7 E%28%29: 3.9e-30 Smith-Waterman score: 577%3B 40.171 identity in 234 aa overlap. Same homolog as for next downstream ORF. ORF ftt0797;Dbxref=GOA:Q5NGN8,InterPro:IPR001173,UniProtKB%2FTrEMBL:Q5NGN8,Genbank:YP_169804.1,GeneID:3191827;gbkey=CDS;product=glycosyl transferase family protein;protein_id=YP_169804.1;transl_table=11
NC_006570.2	RefSeq	gene	816641	817648	.	+	.	ID=gene808;Name=FTT_0798;Dbxref=GeneID:3191812;gbkey=Gene;locus_tag=FTT_0798
NC_006570.2	RefSeq	CDS	816641	817648	.	+	0	ID=cds721;Name=YP_169805.1;Parent=gene808;Note=Similar to O85000 Galactosyl transferase from Streptococcus pneumoniae %28323 aa%29. FASTA: opt: 499 Z-score: 609.1 E%28%29: 4.9e-26 Smith-Waterman score: 499%3B 34.454 identity in 238 aa overlap. Same homolog as for next upstream ORF. ORF ftt0798;Dbxref=GOA:Q5NGN7,InterPro:IPR001173,UniProtKB%2FTrEMBL:Q5NGN7,Genbank:YP_169805.1,GeneID:3191812;gbkey=CDS;product=glycosyl transferase family protein;protein_id=YP_169805.1;transl_table=11
NC_006570.2	RefSeq	gene	817651	818664	.	+	.	ID=gene809;Name=FTT_0799;Dbxref=GeneID:3191811;gbkey=Gene;locus_tag=FTT_0799
NC_006570.2	RefSeq	CDS	817651	818664	.	+	0	ID=cds722;Name=YP_169806.1;Parent=gene809;Note=Similar to Q00481 Second mannosyl transferase from Salmonella enterica %28336 aa%29. FASTA: opt: 651 Z-score: 775.2 E%28%29: 2.7e-35 Smith-Waterman score: 651%3B 35.455 identity in 330 aa overlap. ORF ftt0799;Dbxref=GOA:Q5NGN6,InterPro:IPR001296,UniProtKB%2FTrEMBL:Q5NGN6,Genbank:YP_169806.1,GeneID:3191811;gbkey=CDS;product=glycosyl transferases group 1 family protein;protein_id=YP_169806.1;transl_table=11
NC_006570.2	RefSeq	gene	818683	819345	.	+	.	ID=gene810;Name=FTT_0800;Dbxref=GeneID:3191810;gbkey=Gene;locus_tag=FTT_0800
NC_006570.2	RefSeq	CDS	818683	819345	.	+	0	ID=cds723;Name=YP_169807.1;Parent=gene810;Note=Similar to Q8FV27 Hydrolase%2C haloacid dehalogenase-like family from Brucella suis %28234 aa%29. FASTA: opt: 422 Z-score: 503.3 E%28%29: 3.8e-20 Smith-Waterman score: 422%3B 33.486identity in 218 aa overlap. ORF ftt0800;Dbxref=GOA:Q5NGN5,InterPro:IPR010237,UniProtKB%2FTrEMBL:Q5NGN5,Genbank:YP_169807.1,GeneID:3191810;gbkey=CDS;product=haloacid dehalogenase;protein_id=YP_169807.1;transl_table=11
NC_006570.2	RefSeq	gene	819627	820733	.	-	.	ID=gene811;Name=FTT_0801c;Dbxref=GeneID:3191809;gbkey=Gene;locus_tag=FTT_0801c
NC_006570.2	RefSeq	CDS	819627	820733	.	-	0	ID=cds724;Name=YP_169808.1;Parent=gene811;Note=Similar to Q9YG89 310AA long hypothetical sugar kinase from Aeropyrum pernix %28310 aa%29. FASTA: opt: 245 Z-score: 292.6 E%28%29: 2.1e-08 Smith-Waterman score: 311%3B 25.795 identity in 283 aa overlap. ORF ftt0801c;Dbxref=GOA:Q5NGN4,InterPro:IPR011611,UniProtKB%2FTrEMBL:Q5NGN4,Genbank:YP_169808.1,GeneID:3191809;gbkey=CDS;product=carbohydrate%2Fpurine kinase pfkB family protein;protein_id=YP_169808.1;transl_table=11
NC_006570.2	RefSeq	gene	820936	821754	.	+	.	ID=gene812;Name=cphB;Dbxref=GeneID:3191887;gbkey=Gene;gene=cphB;locus_tag=FTT_0802
NC_006570.2	RefSeq	CDS	820936	821754	.	+	0	ID=cds725;Name=YP_169809.1;Parent=gene812;Note=Similar to CPHB_SYNY8 %28P56946%29 Cyanophycinase from Synechocystis sp. %28strain PCC 6308%29 %28272 aa%29. FASTA: opt: 701 Z-score: 857.3 E%28%29: 7.4e-40 Smith-Waterman score: 701%3B 41.667 identity in 264 aa overlap.;Dbxref=GOA:Q5NGN3,InterPro:IPR011811,UniProtKB%2FTrEMBL:Q5NGN3,Genbank:YP_169809.1,GeneID:3191887;gbkey=CDS;product=cyanophycinase;protein_id=YP_169809.1;transl_table=11
NC_006570.2	RefSeq	gene	821970	822833	.	+	.	ID=gene813;Name=ans;Dbxref=GeneID:3190806;gbkey=Gene;gene=ans;locus_tag=FTT_0803
NC_006570.2	RefSeq	CDS	821970	822833	.	+	0	ID=cds726;Name=YP_169810.1;Parent=gene813;Note=Similar to Q9ABX3 Asparaginase family protein from Caulobacter crescentus %28292 aa%29. FASTA: 146 opt: 465 Z-score: 567.7 E%28%29: 1e-23 Smith-Waterman score: 465%3B 35.606 identity in 264 aa overlap.;Dbxref=GOA:Q5NGN2,InterPro:IPR000246,UniProtKB%2FTrEMBL:Q5NGN2,Genbank:YP_169810.1,GeneID:3190806;gbkey=CDS;product=asparaginase;protein_id=YP_169810.1;transl_table=11
NC_006570.2	RefSeq	gene	822892	822967	.	+	.	ID=gene814;Name=tRNA-Phe %28GAA%29;Dbxref=GeneID:3192266;description=tRNA-Phe %28GAA%29;gbkey=Gene;gene=tRNA-Phe %28GAA%29;locus_tag=FTT_t11
NC_006570.2	RefSeq	tRNA	822892	822967	.	+	.	ID=rna11;Dbxref=GeneID:3192266;codons=1;gbkey=tRNA;product=tRNA-Phe
NC_006570.2	RefSeq	exon	822892	822967	.	+	.	ID=id120;Parent=rna11;Dbxref=GeneID:3192266;codons=1;gbkey=tRNA;product=tRNA-Phe
NC_006570.2	RefSeq	gene	822985	823061	.	+	.	ID=gene815;Name=tRNA-Pro %28TGG%29;Dbxref=GeneID:3192268;description=tRNA-Pro %28TGG%29;gbkey=Gene;gene=tRNA-Pro %28TGG%29;locus_tag=FTT_t12
NC_006570.2	RefSeq	tRNA	822985	823061	.	+	.	ID=rna12;Dbxref=GeneID:3192268;codons=22;gbkey=tRNA;product=tRNA-Pro
NC_006570.2	RefSeq	exon	822985	823061	.	+	.	ID=id121;Parent=rna12;Dbxref=GeneID:3192268;codons=22;gbkey=tRNA;product=tRNA-Pro
NC_006570.2	RefSeq	gene	823070	823146	.	+	.	ID=gene816;Name=tRNA-Arg %28TCT%29;Dbxref=GeneID:3192219;description=tRNA-Arg %28TCT%29;gbkey=Gene;gene=tRNA-Arg %28TCT%29;locus_tag=FTT_t13
NC_006570.2	RefSeq	tRNA	823070	823146	.	+	.	ID=rna13;Dbxref=GeneID:3192219;codons=46;gbkey=tRNA;product=tRNA-Arg
NC_006570.2	RefSeq	exon	823070	823146	.	+	.	ID=id122;Parent=rna13;Dbxref=GeneID:3192219;codons=46;gbkey=tRNA;product=tRNA-Arg
NC_006570.2	RefSeq	gene	823174	823246	.	+	.	ID=gene817;Name=tRNA-His %28GTG%29;Dbxref=GeneID:3192243;description=tRNA-His %28GTG%29;gbkey=Gene;gene=tRNA-His %28GTG%29;locus_tag=FTT_t14
NC_006570.2	RefSeq	tRNA	823174	823246	.	+	.	ID=rna14;Dbxref=GeneID:3192243;codons=25;gbkey=tRNA;product=tRNA-His
NC_006570.2	RefSeq	exon	823174	823246	.	+	.	ID=id123;Parent=rna14;Dbxref=GeneID:3192243;codons=25;gbkey=tRNA;product=tRNA-His
NC_006570.2	RefSeq	gene	823256	823338	.	+	.	ID=gene818;Name=tRNA-Leu %28TAG%29;Dbxref=GeneID:3192263;description=tRNA-Leu %28TAG%29;gbkey=Gene;gene=tRNA-Leu %28TAG%29;locus_tag=FTT_t15
NC_006570.2	RefSeq	tRNA	823256	823338	.	+	.	ID=rna15;Dbxref=GeneID:3192263;codons=18;gbkey=tRNA;product=tRNA-Leu
NC_006570.2	RefSeq	exon	823256	823338	.	+	.	ID=id124;Parent=rna15;Dbxref=GeneID:3192263;codons=18;gbkey=tRNA;product=tRNA-Leu
NC_006570.2	RefSeq	gene	823505	824761	.	+	.	ID=gene819;Name=FTT_0804;Dbxref=GeneID:3191808;gbkey=Gene;locus_tag=FTT_0804
NC_006570.2	RefSeq	CDS	823505	824761	.	+	0	ID=cds727;Name=YP_169811.1;Parent=gene819;Note=Similar to O54543 %28O54543%29 CITA from Legionella pneumophila %28418 aa%29. FASTA: opt: 905 Z-score: 915.1 E%28%29: 4.5e-43 Smith-Waterman score: 905%3B 33.254 identity in 418 aa overlap. ORF ftt0804;Dbxref=GOA:Q5NGN1,InterPro:IPR005829,UniProtKB%2FTrEMBL:Q5NGN1,Genbank:YP_169811.1,GeneID:3191808;gbkey=CDS;product=major facilitator transporter;protein_id=YP_169811.1;transl_table=11
NC_006570.2	RefSeq	gene	824837	826054	.	+	.	ID=gene820;Name=capB;Dbxref=GeneID:3190971;gbkey=Gene;gene=capB;locus_tag=FTT_0805
NC_006570.2	RefSeq	CDS	824837	826054	.	+	0	ID=cds728;Name=YP_169812.1;Parent=gene820;Note=Similar to CAD71904 Capsule biosynthesis protein CapB from Rhodopirellula baltica %28441 aa%29. FASTA: opt: 1155 Z-score: 1414.5 E%28%29: 6.8e-71 Smith-Waterman score: 1156%3B 46.763 identity %2850.914 ungapped%29 in 417 aa overlap.;Dbxref=GOA:Q5NGN0,InterPro:IPR013221,UniProtKB%2FTrEMBL:Q5NGN0,Genbank:YP_169812.1,GeneID:3190971;gbkey=CDS;product=capsule biosynthesis protein capB;protein_id=YP_169812.1;transl_table=11
NC_006570.2	RefSeq	gene	826079	826543	.	+	.	ID=gene821;Name=capC;Dbxref=GeneID:3192366;gbkey=Gene;gene=capC;locus_tag=FTT_0806
NC_006570.2	RefSeq	CDS	826079	826543	.	+	0	ID=cds729;Name=YP_169813.1;Parent=gene821;Note=Similar to Q8REZ4 CapC protein from Fusobacterium nucleatum %28152 aa%29. FASTA: opt: 360 Z-score: 420.9 E%28%29: 1.5e-15 Smith-Waterman score: 360%3B 35.616 identity in 146 aa overlap.;Dbxref=GOA:Q5NGM9,InterPro:IPR008338,UniProtKB%2FTrEMBL:Q5NGM9,Genbank:YP_169813.1,GeneID:3192366;gbkey=CDS;product=capsule biosynthesis protein CapC;protein_id=YP_169813.1;transl_table=11
NC_006570.2	RefSeq	gene	826545	827756	.	+	.	ID=gene822;Name=FTT_0807;Dbxref=GeneID:3191829;gbkey=Gene;locus_tag=FTT_0807
NC_006570.2	RefSeq	CDS	826545	827756	.	+	0	ID=cds730;Name=YP_169814.2;Parent=gene822;Note=Similar to CAD71902 Hypothetical protein from Rhodopirellula baltica %28404 aa%29. FASTA: opt: 477 Z-score: 563.9 E%28%29: 1.6e-23 Smith-Waterman score: 553%3B 31.633 identity in 392 aa overlap. ORF ftt0807;Dbxref=UniProtKB%2FTrEMBL:Q5NGM8,Genbank:YP_169814.2,GeneID:3191829;gbkey=CDS;product=hypothetical protein;protein_id=YP_169814.2;transl_table=11
NC_006570.2	RefSeq	gene	827816	829939	.	+	.	ID=gene823;Name=spoT;Dbxref=GeneID:3190723;gbkey=Gene;gene=spoT;locus_tag=FTT_0808
NC_006570.2	RefSeq	CDS	827816	829939	.	+	0	ID=cds731;Name=YP_169815.1;Parent=gene823;Note=Similar to SPOT_ECOLI Guanosine-3%27%2C5%27-bis%28Diphosphate%29 3%27-pyrophosphohydrolase from Escherichia coli %28702 aa%29. FASTA: opt: 1849 Z-score: 2107.7 E%28%29: 1.7e-109 Smith-Waterman score: 1849%3B 41.210 identity in 711 aa overlap.;Dbxref=GOA:Q5NGM7,InterPro:IPR012675,UniProtKB%2FTrEMBL:Q5NGM7,Genbank:YP_169815.1,GeneID:3190723;gbkey=CDS;product=guanosine-3%27%2C5%27-bis%28diphosphate%29 3%27-pyrophosphohydrolase;protein_id=YP_169815.1;transl_table=11
NC_006570.2	RefSeq	gene	829947	830549	.	-	.	ID=gene824;Name=recR;Dbxref=GeneID:3191634;gbkey=Gene;gene=recR;locus_tag=FTT_0809c
NC_006570.2	RefSeq	CDS	829947	830549	.	-	0	ID=cds732;Name=YP_169816.1;Parent=gene824;Note=involved in a recombinational process of DNA repair%2C independent of the recBC complex;Dbxref=GOA:Q5NGM6,InterPro:IPR015967,UniProtKB%2FSwiss-Prot:Q5NGM6,Genbank:YP_169816.1,GeneID:3191634;gbkey=CDS;product=recombination protein RecR;protein_id=YP_169816.1;transl_table=11
NC_006570.2	RefSeq	gene	830549	830887	.	-	.	ID=gene825;Name=ybaB;Dbxref=GeneID:3192128;gbkey=Gene;gene=ybaB;locus_tag=FTT_0810c
NC_006570.2	RefSeq	CDS	830549	830887	.	-	0	ID=cds733;Name=YP_169817.1;Parent=gene825;Note=Similar to YBAB_ECOLI Hypothetical UPF0133 protein ybaB from Escherichia coli %28109 aa%29. FASTA: opt: 332 Z-score: 403.8 E%28%29: 1.3e-14 Smith-Waterman score: 332%3B 49.074identity in 108 aa overlap.;Dbxref=InterPro:IPR004401,UniProtKB%2FSwiss-Prot:Q5NGM5,Genbank:YP_169817.1,GeneID:3192128;gbkey=CDS;product=hypothetical protein;protein_id=YP_169817.1;transl_table=11
NC_006570.2	RefSeq	gene	830897	832012	.	-	.	ID=gene826;Name=murG;Dbxref=GeneID:3192028;gbkey=Gene;gene=murG;locus_tag=FTT_0811c
NC_006570.2	RefSeq	CDS	830897	832012	.	-	0	ID=cds734;Name=YP_169818.1;Parent=gene826;Note=UDP-N-acetylglucosamine--N-acetylmuramyl-%28pentapeptide%29 pyrophosphoryl-undecaprenol N-acetylglucosamine transferase%3B involved in cell wall formation%3B inner membrane-associated%3B last step of peptidoglycan synthesis;Dbxref=GOA:Q5NGM4,InterPro:IPR007235,UniProtKB%2FSwiss-Prot:Q5NGM4,Genbank:YP_169818.1,GeneID:3192028;gbkey=CDS;product=undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase;protein_id=YP_169818.1;transl_table=11
NC_006570.2	RefSeq	gene	832116	832496	.	+	.	ID=gene827;Name=gcvH2;Dbxref=GeneID:3191479;gbkey=Gene;gene=gcvH2;locus_tag=FTT_0812
NC_006570.2	RefSeq	CDS	832116	832496	.	+	0	ID=cds735;Name=YP_169819.1;Parent=gene827;Note=Similar to GCS1_SULTO Probable glycine cleavage system H from Sulfolobus tokodaii %28142 aa%29. FASTA: opt: 397 Z-score: 525.8 E%28%29: 2.1e-21 Smith-Waterman score: 397%3B 43.089 identity in 123 aa overlap.;Dbxref=GOA:Q5NGM3,InterPro:IPR017453,UniProtKB%2FTrEMBL:Q5NGM3,Genbank:YP_169819.1,GeneID:3191479;gbkey=CDS;product=glycine cleavage system protein H;protein_id=YP_169819.1;transl_table=11
NC_006570.2	RefSeq	gene	832486	832782	.	+	.	ID=gene828;Name=FTT_0813;Dbxref=GeneID:3190926;gbkey=Gene;locus_tag=FTT_0813
NC_006570.2	RefSeq	CDS	832486	832782	.	+	0	ID=cds736;Name=YP_169820.1;Parent=gene828;Note=ORF ftt0813;Dbxref=UniProtKB%2FTrEMBL:Q5NGM2,Genbank:YP_169820.1,GeneID:3190926;gbkey=CDS;product=hypothetical protein;protein_id=YP_169820.1;transl_table=11
NC_006570.2	RefSeq	gene	832868	833467	.	-	.	ID=gene829;Name=FTT_0814c;Dbxref=GeneID:3191806;gbkey=Gene;locus_tag=FTT_0814c
NC_006570.2	RefSeq	CDS	832868	833467	.	-	0	ID=cds737;Name=YP_169821.1;Parent=gene829;Note=ORF ftt0814c;Dbxref=UniProtKB%2FTrEMBL:Q5NGM1,Genbank:YP_169821.1,GeneID:3191806;gbkey=CDS;product=hypothetical protein;protein_id=YP_169821.1;transl_table=11
NC_006570.2	RefSeq	gene	833475	833723	.	-	.	ID=gene830;Name=FTT_0815c;Dbxref=GeneID:3192175;gbkey=Gene;locus_tag=FTT_0815c
NC_006570.2	RefSeq	CDS	833475	833723	.	-	0	ID=cds738;Name=YP_169822.1;Parent=gene830;Note=ORF ftt0815c;Dbxref=UniProtKB%2FTrEMBL:Q5NGM0,Genbank:YP_169822.1,GeneID:3192175;gbkey=CDS;product=hypothetical protein;protein_id=YP_169822.1;transl_table=11
NC_006570.2	RefSeq	gene	833767	834660	.	-	.	ID=gene831;Name=FTT_0816c;Dbxref=GeneID:3191803;gbkey=Gene;locus_tag=FTT_0816c
NC_006570.2	RefSeq	CDS	833767	834660	.	-	0	ID=cds739;Name=YP_169823.1;Parent=gene831;Note=Similar to Q8EHY2 Chitin-binding protein%2C from Shewanella oneidensis %28491 aa%29. FASTA: opt: 532 Z-score: 628.3 E%28%29: 4.2e-27 Smith-Waterman score: 532%3B 43.500 identity in 200 aa overlap. ORF ftt0816c;Dbxref=GOA:Q5NGL9,InterPro:IPR004302,UniProtKB%2FTrEMBL:Q5NGL9,Genbank:YP_169823.1,GeneID:3191803;gbkey=CDS;product=chitin binding protein;protein_id=YP_169823.1;transl_table=11
NC_006570.2	RefSeq	gene	835100	837004	.	+	.	ID=gene832;Name=thrS;Dbxref=GeneID:3190763;gbkey=Gene;gene=thrS;locus_tag=FTT_0817
NC_006570.2	RefSeq	CDS	835100	837004	.	+	0	ID=cds740;Name=YP_169824.1;Parent=gene832;Note=catalyzes a two-step reaction%2C first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B catalyzes the formation of threonyl-tRNA%28Thr%29 from threonine and tRNA%28Thr%29;Dbxref=GOA:Q5NGL8,InterPro:IPR018158,UniProtKB%2FSwiss-Prot:Q5NGL8,Genbank:YP_169824.1,GeneID:3190763;gbkey=CDS;product=threonyl-tRNA synthetase;protein_id=YP_169824.1;transl_table=11
NC_006570.2	RefSeq	gene	837080	837547	.	+	.	ID=gene833;Name=infC;Dbxref=GeneID:3191791;gbkey=Gene;gene=infC;locus_tag=FTT_0818
NC_006570.2	RefSeq	CDS	837080	837547	.	+	0	ID=cds741;Name=YP_169825.1;Parent=gene833;Note=Similar to IF3_ECOLI Translation initiation factor IF-3 from Escherichia coli %28180 aa%29. FASTA: opt: 674 Z-score: 836.1 E%28%29: 1.1e-38 Smith-Waterman score: 674%3B 64.103 identity in 156 aa overlap.;Dbxref=GOA:Q5NGL7,InterPro:IPR001288,UniProtKB%2FTrEMBL:Q5NGL7,Genbank:YP_169825.1,GeneID:3191791;gbkey=CDS;product=translation initiation factor IF-3;protein_id=YP_169825.1;transl_table=11
NC_006570.2	RefSeq	gene	837590	837787	.	+	.	ID=gene834;Name=rpmI;Dbxref=GeneID:3191986;gbkey=Gene;gene=rpmI;locus_tag=FTT_0819
NC_006570.2	RefSeq	CDS	837590	837787	.	+	0	ID=cds742;Name=YP_169826.1;Parent=gene834;Note=Similar to RL35_ECOLI 50S ribosomal protein L35 from Escherichia coli %2864 aa%29. FASTA: opt: 247 Z-score: 385.9 E%28%29: 1.3e-13 Smith-Waterman score: 247%3B 62.500 identity in 64 aa overlap.;Dbxref=GOA:Q5NGL6,InterPro:IPR018265,UniProtKB%2FSwiss-Prot:Q5NGL6,Genbank:YP_169826.1,GeneID:3191986;gbkey=CDS;product=50S ribosomal protein L35;protein_id=YP_169826.1;transl_table=11
NC_006570.2	RefSeq	gene	837823	838179	.	+	.	ID=gene835;Name=rplT;Dbxref=GeneID:3192002;gbkey=Gene;gene=rplT;locus_tag=FTT_0820
NC_006570.2	RefSeq	CDS	837823	838179	.	+	0	ID=cds743;Name=YP_169827.1;Parent=gene835;Note=binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit;Dbxref=GOA:Q5NGL5,InterPro:IPR005813,UniProtKB%2FSwiss-Prot:Q5NGL5,Genbank:YP_169827.1,GeneID:3192002;gbkey=CDS;product=50S ribosomal protein L20;protein_id=YP_169827.1;transl_table=11
NC_006570.2	RefSeq	gene	838221	838925	.	+	.	ID=gene836;Name=FTT_0821;Dbxref=GeneID:3192335;gbkey=Gene;locus_tag=FTT_0821
NC_006570.2	RefSeq	CDS	838221	838925	.	+	0	ID=cds744;Name=YP_169828.1;Parent=gene836;Note=Similar to Q9KRB9 Hypothetical protein VC1723 from Vibrio cholerae %28229 aa%29. FASTA: opt: 344 Z-score: 394.7 E%28%29: 4.3e-14 Smith-Waterman score: 344%3B 29.075 identity in 227 aa overlap. ORF ftt0821;Dbxref=InterPro:IPR015414,UniProtKB%2FTrEMBL:Q5NGL4,Genbank:YP_169828.1,GeneID:3192335;gbkey=CDS;product=hypothetical protein;protein_id=YP_169828.1;transl_table=11
NC_006570.2	RefSeq	repeat_region	839153	839164	.	+	.	ID=id125;Note=ISFtu1 12bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	839165	839180	.	+	.	ID=id126;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	839181	839196	.	+	.	ID=id127;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;gbkey=repeat_region
NC_006570.2	RefSeq	gene	839217	840001	.	+	.	ID=gene837;Name=isftu1;Dbxref=GeneID:3191797;gbkey=Gene;gene=isftu1;locus_tag=FTT_0822
NC_006570.2	RefSeq	CDS	839217	839543	.	+	0	ID=cds745;Name=YP_169829.1;Parent=gene837;Note=ISFtu1. Transposase%2C member of the IS630 Tc-1 mariner family. Identical to Q93EJ6  transposase from Francisella tularensis %28118 aa%29 from aa 144-261. Identical to Q93EJ7  transposase from Francisella tularensis %28126 aa%29 from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF%27s. ORF1 %28identical to Q93EJ7%29 contains a programmed ribosomal frameshifting motif%2C 5%27-AAAAAAAG-3%27 at aa position 109 which permits frameshifting to ORF2 %28identical to Q93EJ6%29 to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family%2C and also mariner elements%2C show that this transposase shares strongly conserved residues%2C including a fully conserved dipeptide%2CAsp-Glu %28DE%29%2C and a block consisting of a fully conserved Asp and highly conserved Glu%2C separated by 34 or 35 residues %28D35E%29. The conserved dipeptide is only present if ribosomal frameshifting occurs.;Dbxref=UniProtKB%2FTrEMBL:Q5NIH2,Genbank:YP_169829.1,GeneID:3191797;gbkey=CDS;product=transposase;protein_id=YP_169829.1;transl_table=11
NC_006570.2	RefSeq	CDS	839543	840001	.	+	0	ID=cds745;Name=YP_169829.1;Parent=gene837;Note=ISFtu1. Transposase%2C member of the IS630 Tc-1 mariner family. Identical to Q93EJ6  transposase from Francisella tularensis %28118 aa%29 from aa 144-261. Identical to Q93EJ7  transposase from Francisella tularensis %28126 aa%29 from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF%27s. ORF1 %28identical to Q93EJ7%29 contains a programmed ribosomal frameshifting motif%2C 5%27-AAAAAAAG-3%27 at aa position 109 which permits frameshifting to ORF2 %28identical to Q93EJ6%29 to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family%2C and also mariner elements%2C show that this transposase shares strongly conserved residues%2C including a fully conserved dipeptide%2CAsp-Glu %28DE%29%2C and a block consisting of a fully conserved Asp and highly conserved Glu%2C separated by 34 or 35 residues %28D35E%29. The conserved dipeptide is only present if ribosomal frameshifting occurs.;Dbxref=UniProtKB%2FTrEMBL:Q5NIH2,Genbank:YP_169829.1,GeneID:3191797;gbkey=CDS;product=transposase;protein_id=YP_169829.1;transl_table=11
NC_006570.2	RefSeq	repeat_region	840089	840100	.	+	.	ID=id128;Note=ISFtu1 12bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	gene	840225	840872	.	+	.	ID=gene838;Name=FTT_0823;Dbxref=GeneID:3191835;gbkey=Gene;locus_tag=FTT_0823
NC_006570.2	RefSeq	CDS	840225	840872	.	+	0	ID=cds746;Name=YP_169830.1;Parent=gene838;Note=Similar to Q9K8B7 Mutator MutT protein from Bacillus halodurans %28207 aa%29. FASTA: opt: 413 Z-score: 505.4 E%28%29: 2.9e-20 Smith-Waterman score: 413%3B 36.649identity in 191 aa overlap. ORF ftt0823;Dbxref=GOA:Q5NGL2,InterPro:IPR000086,UniProtKB%2FTrEMBL:Q5NGL2,Genbank:YP_169830.1,GeneID:3191835;gbkey=CDS;product=MutT protein;protein_id=YP_169830.1;transl_table=11
NC_006570.2	RefSeq	gene	840890	841243	.	+	.	ID=gene839;Name=arsC1;Dbxref=GeneID:3192546;gbkey=Gene;gene=arsC1;locus_tag=FTT_0824
NC_006570.2	RefSeq	CDS	840890	841243	.	+	0	ID=cds747;Name=YP_169831.1;Parent=gene839;Note=Similar to Q8CPW9 Arsenate reductase from Staphylococcus epidermidis %28117 aa%29. FASTA: opt: 276 Z-score: 376.2 E%28%29: 4.6e-13 Smith-Waterman score: 276%3B 32.759 identity in 116 aa overlap.;Dbxref=GOA:Q5NGL1,InterPro:IPR012335,UniProtKB%2FTrEMBL:Q5NGL1,Genbank:YP_169831.1,GeneID:3192546;gbkey=CDS;product=arsenate reductase;protein_id=YP_169831.1;transl_table=11
NC_006570.2	RefSeq	gene	841267	841602	.	-	.	ID=gene840;Name=FTT_0825c;Dbxref=GeneID:3191761;gbkey=Gene;locus_tag=FTT_0825c
NC_006570.2	RefSeq	CDS	841267	841602	.	-	0	ID=cds748;Name=YP_169832.1;Parent=gene840;Note=hypothetical lipoprotein%2C no significant homologs. ORF ftt0825c;Dbxref=UniProtKB%2FTrEMBL:Q5NGL0,Genbank:YP_169832.1,GeneID:3191761;gbkey=CDS;product=hypothetical protein;protein_id=YP_169832.1;transl_table=11
NC_006570.2	RefSeq	gene	841779	842024	.	-	.	ID=gene841;Name=FTT_0826c;Dbxref=GeneID:3191760;gbkey=Gene;locus_tag=FTT_0826c
NC_006570.2	RefSeq	CDS	841779	842024	.	-	0	ID=cds749;Name=YP_169833.1;Parent=gene841;Note=ORF ftt0826c;Dbxref=UniProtKB%2FTrEMBL:Q5NGK9,Genbank:YP_169833.1,GeneID:3191760;gbkey=CDS;product=lipoprotein;protein_id=YP_169833.1;transl_table=11
NC_006570.2	RefSeq	gene	842102	843415	.	-	.	ID=gene842;Name=FTT_0827c;Dbxref=GeneID:3191758;gbkey=Gene;locus_tag=FTT_0827c
NC_006570.2	RefSeq	CDS	842102	843415	.	-	0	ID=cds750;Name=YP_169834.1;Parent=gene842;Note=Similar to YIEG_ECOLI Hypothetical protein yieG from Escherichia coli %28445 aa%29. FASTA: opt: 945 Z-score: 1037.7 E%28%29: 6.6e-50 Smith-Waterman score: 945%3B 34.633 identity in 436 aa overlap. ORF ftt0827c;Dbxref=GOA:Q5NGK8,InterPro:IPR006043,UniProtKB%2FTrEMBL:Q5NGK8,Genbank:YP_169834.1,GeneID:3191758;gbkey=CDS;product=hypothetical protein;protein_id=YP_169834.1;transl_table=11
NC_006570.2	RefSeq	gene	843485	845067	.	-	.	ID=gene843;Name=FTT_0828c;Dbxref=GeneID:3191757;gbkey=Gene;locus_tag=FTT_0828c;pseudo=true
NC_006570.2	RefSeq	gene	845080	846795	.	-	.	ID=gene844;Name=FTT_0829c;Dbxref=GeneID:3191754;gbkey=Gene;locus_tag=FTT_0829c
NC_006570.2	RefSeq	CDS	845080	846795	.	-	0	ID=cds751;Name=YP_169835.1;Parent=gene844;Note=Similar to Q845W9 Aspartate:alanine antiporter from Pseudomonas dacunhae %28561 aa%29. FASTA: opt: 1359 Z-score: 1502.2 bits: 287.8 E%28%29: 8.8e-76 Smith-Waterman score: 1359%3B 38.351 identity in 558 aa overlap. ORF ftt0829c;Dbxref=GOA:Q5NGK7,InterPro:IPR006512,UniProtKB%2FSwiss-Prot:Q5NGK7,Genbank:YP_169835.1,GeneID:3191754;gbkey=CDS;product=aspartate:alanine antiporter;protein_id=YP_169835.1;transl_table=11
NC_006570.2	RefSeq	gene	846842	847950	.	-	.	ID=gene845;Name=FTT_0830c;Dbxref=GeneID:3191753;gbkey=Gene;locus_tag=FTT_0830c;pseudo=true
NC_006570.2	RefSeq	gene	847950	849203	.	-	.	ID=gene846;Name=FTT_0831c;Dbxref=GeneID:3191752;gbkey=Gene;locus_tag=FTT_0831c
NC_006570.2	RefSeq	CDS	847950	849203	.	-	0	ID=cds752;Name=YP_169836.1;Parent=gene846;Note=Weakly similar to Q8A8H3 Outer membrane protein%2COmpA family from Bacteroides thetaiotaomicron %28266 aa%29. FASTA: opt: 184 Z-score: 220.7 E%28%29: 0.00021 Smith-Waterman score: 184%3B 29.299 identity in 157 aa overlap. ORF ftt0831c;Dbxref=GOA:Q5NGK6,InterPro:IPR006665,UniProtKB%2FTrEMBL:Q5NGK6,Genbank:YP_169836.1,GeneID:3191752;gbkey=CDS;product=OmpA family protein;protein_id=YP_169836.1;transl_table=11
NC_006570.2	RefSeq	gene	849395	849859	.	+	.	ID=gene847;Name=fkpB;Dbxref=GeneID:3191946;gbkey=Gene;gene=fkpB;locus_tag=FTT_0832
NC_006570.2	RefSeq	CDS	849395	849859	.	+	0	ID=cds753;Name=YP_169837.1;Parent=gene847;Note=Similar to FKBX_ECOLI %28P22563%29 FKBP-type 16 kDa peptidyl-prolyl cis-trans isomerase from Escherichia coli %28148 aa%29. FASTA: opt: 357 Z-score: 475.0 E%28%29: 1.4e-18 Smith-Waterman score: 357%3B 38.129 identity in 139 aa overlap.;Dbxref=GOA:Q5NGK5,InterPro:IPR001179,UniProtKB%2FTrEMBL:Q5NGK5,Genbank:YP_169837.1,GeneID:3191946;gbkey=CDS;product=FKBP-type peptidylprolyl isomerase;protein_id=YP_169837.1;transl_table=11
NC_006570.2	RefSeq	gene	849840	850796	.	+	.	ID=gene848;Name=ispH;Dbxref=GeneID:3190808;gbkey=Gene;gene=ispH;locus_tag=FTT_0833
NC_006570.2	RefSeq	CDS	849840	850796	.	+	0	ID=cds754;Name=YP_169838.1;Parent=gene848;Note=catalyzes the conversion of 1-hydroxy-2-methyl-2-%28E%29-butenyl 4-diphosphate into isopentenyl diphosphate %28IPP%29 and dimethylallyl diphosphate %28DMAPP%29%3B functions in the nonmevalonate isoprenoid biosynthesis pathway;Dbxref=GOA:Q5NGK4,InterPro:IPR003451,UniProtKB%2FSwiss-Prot:Q5NGK4,Genbank:YP_169838.1,GeneID:3190808;gbkey=CDS;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=YP_169838.1;transl_table=11
NC_006570.2	RefSeq	gene	850798	851160	.	+	.	ID=gene849;Name=aroQ;Dbxref=GeneID:3190933;gbkey=Gene;gene=aroQ;locus_tag=FTT_0834
NC_006570.2	RefSeq	CDS	850798	851160	.	+	0	ID=cds755;Name=YP_169839.1;Parent=gene849;Note=Similar to CHMU_BACSU Chorismate mutase from Bacillus subtilis %28127 aa%29. FASTA: opt: 360 Z-score: 492.8 E%28%29: 1.5e-19 Smith-Waterman score: 360%3B 48.305identity in 118 aa overlap.;Dbxref=GOA:Q5NGK3,InterPro:IPR013813,UniProtKB%2FTrEMBL:Q5NGK3,Genbank:YP_169839.1,GeneID:3190933;gbkey=CDS;product=chorismate mutase;protein_id=YP_169839.1;transl_table=11
NC_006570.2	RefSeq	gene	851169	851990	.	+	.	ID=gene850;Name=FTT_0835;Dbxref=GeneID:3191751;gbkey=Gene;locus_tag=FTT_0835
NC_006570.2	RefSeq	CDS	851169	851990	.	+	0	ID=cds756;Name=YP_169840.1;Parent=gene850;Note=Similar to Q8EBE8 CDP-diacylglycerol--serine O-phosphatidyltransferase from Shewanella oneidensis %28269 aa%29. FASTA: opt: 456 Z-score: 550.1 E%28%29: 9.5e-23 Smith-Waterman score: 564%3B 37.209 identity in 258 aa overlap. ORF ftt0835;Dbxref=GOA:Q5NGK2,InterPro:IPR000462,UniProtKB%2FTrEMBL:Q5NGK2,Genbank:YP_169840.1,GeneID:3191751;gbkey=CDS;product=CDP-alcohol phosphatidyltransferase;protein_id=YP_169840.1;transl_table=11
NC_006570.2	RefSeq	gene	851995	852219	.	-	.	ID=gene851;Name=FTT_0836c;Dbxref=GeneID:3191749;gbkey=Gene;locus_tag=FTT_0836c
NC_006570.2	RefSeq	CDS	851995	852219	.	-	0	ID=cds757;Name=YP_169841.1;Parent=gene851;Note=ORF ftt0836c;Dbxref=UniProtKB%2FTrEMBL:Q5NGK1,Genbank:YP_169841.1,GeneID:3191749;gbkey=CDS;product=hypothetical protein;protein_id=YP_169841.1;transl_table=11
NC_006570.2	RefSeq	gene	852360	853079	.	+	.	ID=gene852;Name=tolQ;Dbxref=GeneID:3191457;gbkey=Gene;gene=tolQ;locus_tag=FTT_0837
NC_006570.2	RefSeq	CDS	852360	853079	.	+	0	ID=cds758;Name=YP_169842.1;Parent=gene852;Note=Similar to TOLQ_ECOLI TolQ protein from Escherichia coli %28230 aa%29. FASTA: opt: 568 Z-score: 690.3 E%28%29: 1.5e-30 Smith-Waterman score: 568%3B 38.991 identity in 218 aa overlap.;Dbxref=GOA:Q5NGK0,InterPro:IPR014163,UniProtKB%2FTrEMBL:Q5NGK0,Genbank:YP_169842.1,GeneID:3191457;gbkey=CDS;product=TolQ protein;protein_id=YP_169842.1;transl_table=11
NC_006570.2	RefSeq	gene	853089	853535	.	+	.	ID=gene853;Name=tolR;Dbxref=GeneID:3191469;gbkey=Gene;gene=tolR;locus_tag=FTT_0838
NC_006570.2	RefSeq	CDS	853089	853535	.	+	0	ID=cds759;Name=YP_169843.1;Parent=gene853;Note=Similar to TOLR_ECOLI TolR protein from Escherichia coli %28142 aa%29. FASTA: opt: 303 Z-score: 379.2 bits: 76.1 E%28%29: 3.2e-13 Smith-Waterman score: 303%3B 39.259identity in 135 aa overlap.;Dbxref=GOA:Q5NGJ9,InterPro:IPR014168,UniProtKB%2FTrEMBL:Q5NGJ9,Genbank:YP_169843.1,GeneID:3191469;gbkey=CDS;product=TolR protein;protein_id=YP_169843.1;transl_table=11
NC_006570.2	RefSeq	gene	853522	854433	.	+	.	ID=gene854;Name=tolA;Dbxref=GeneID:3191750;gbkey=Gene;gene=tolA;locus_tag=FTT_0839
NC_006570.2	RefSeq	CDS	853522	854433	.	+	0	ID=cds760;Name=YP_169844.1;Parent=gene854;Note=FTT0839 Contains similarity to Pfam domain PF06519 %28TolA protein%29%2C Score%3D-66.2%2C E-value%3D1.4e-05;Dbxref=InterPro:IPR014161,UniProtKB%2FTrEMBL:Q5NGJ8,Genbank:YP_169844.1,GeneID:3191750;gbkey=CDS;product=hypothetical protein;protein_id=YP_169844.1;transl_table=11
NC_006570.2	RefSeq	gene	854433	855752	.	+	.	ID=gene855;Name=tolB;Dbxref=GeneID:3190788;gbkey=Gene;gene=tolB;locus_tag=FTT_0840
NC_006570.2	RefSeq	CDS	854433	855752	.	+	0	ID=cds761;Name=YP_169845.1;Parent=gene855;Note=Similar to TOLB_ECOLI TolB protein precursor from Eschericia coli %28430 aa%29. FASTA: opt: 692 Z-score: 785.2 E%28%29: 7.6e-36 Smith-Waterman score: 717%3B 31.685identity in 445 aa overlap. TolB appears more highly conserved in other species: potential paralog;Dbxref=GOA:Q5NGJ7,InterPro:IPR011659,UniProtKB%2FSwiss-Prot:Q5NGJ7,Genbank:YP_169845.1,GeneID:3190788;gbkey=CDS;product=TolB protein precursor;protein_id=YP_169845.1;transl_table=11
NC_006570.2	RefSeq	gene	855756	856007	.	+	.	ID=gene856;Name=FTT_0841;Dbxref=GeneID:3191747;gbkey=Gene;locus_tag=FTT_0841
NC_006570.2	RefSeq	CDS	855756	856007	.	+	0	ID=cds762;Name=YP_169846.1;Parent=gene856;Note=ORF ftt0841;Dbxref=UniProtKB%2FTrEMBL:Q5NGJ6,Genbank:YP_169846.1,GeneID:3191747;gbkey=CDS;product=lipoprotein;protein_id=YP_169846.1;transl_table=11
NC_006570.2	RefSeq	gene	856026	856649	.	+	.	ID=gene857;Name=FTT_0842;Dbxref=GeneID:3191746;gbkey=Gene;locus_tag=FTT_0842
NC_006570.2	RefSeq	CDS	856026	856649	.	+	0	ID=cds763;Name=YP_169847.1;Parent=gene857;Note=Similar to PAL_ECOLI Peptidoglycan-associated lipoprotein from Escherichia coli %28173 aa%29. FASTA: opt: 306 Z-score: 383.2 E%28%29: 1.9e-13 Smith-Waterman score: 306%3B 33.333 identity in 162 aa overlap. ORF ftt0842;Dbxref=GOA:Q5NGJ5,InterPro:IPR006690,UniProtKB%2FTrEMBL:Q5NGJ5,Genbank:YP_169847.1,GeneID:3191746;gbkey=CDS;product=peptidoglycan-associated lipoprotein;protein_id=YP_169847.1;transl_table=11
NC_006570.2	RefSeq	gene	856738	858074	.	+	.	ID=gene858;Name=FTT_0843;Dbxref=GeneID:3191744;gbkey=Gene;locus_tag=FTT_0843;pseudo=true
NC_006570.2	RefSeq	gene	858177	858899	.	+	.	ID=gene859;Name=FTT_0844;Dbxref=GeneID:3191745;gbkey=Gene;locus_tag=FTT_0844;pseudo=true
NC_006570.2	RefSeq	gene	858877	859152	.	+	.	ID=gene860;Name=FTT_0845;Dbxref=GeneID:3191743;gbkey=Gene;locus_tag=FTT_0845
NC_006570.2	RefSeq	CDS	858877	859152	.	+	0	ID=cds764;Name=YP_169848.1;Parent=gene860;Note=Similar to Q9K315 Hypothetical protein VCA0343 OR VCA029 from Vibrio cholerae %2883 aa%29. FASTA: opt: 250 Z-score: 356.2 E%28%29: 6e-12 Smith-Waterman score: 250%3B 58.462 identity %2858.4620ngapped%29 in 65 aa overlap. ORF ftt0845;Dbxref=UniProtKB%2FTrEMBL:Q5NGJ4,Genbank:YP_169848.1,GeneID:3191743;gbkey=CDS;product=hypothetical protein;protein_id=YP_169848.1;transl_table=11
NC_006570.2	RefSeq	gene	859133	860632	.	+	.	ID=gene861;Name=FTT_0846;Dbxref=GeneID:3191742;gbkey=Gene;locus_tag=FTT_0846
NC_006570.2	RefSeq	CDS	859133	860632	.	+	0	ID=cds765;Name=YP_169849.1;Parent=gene861;Note=Similar to Q9KS67 Deoxyribodipyrimidine photolyase%2C  from Vibrio cholerae %28504 aa%29. FASTA: opt: 1071 Z-score: 1263.0 E%28%29: 1.8e-62 Smith-Waterman score: 1097%3B 37.817 identity in 513 aa overlap. ORF ftt0846;Dbxref=GOA:Q5NGJ3,InterPro:IPR018394,UniProtKB%2FTrEMBL:Q5NGJ3,Genbank:YP_169849.1,GeneID:3191742;gbkey=CDS;product=deoxyribodipyrimidine photolyase;protein_id=YP_169849.1;transl_table=11
NC_006570.2	RefSeq	gene	860686	862161	.	+	.	ID=gene862;Name=FTT_0847;Dbxref=GeneID:3191738;gbkey=Gene;locus_tag=FTT_0847
NC_006570.2	RefSeq	CDS	860686	862161	.	+	0	ID=cds766;Name=YP_169850.1;Parent=gene862;Note=Similar to Q8U6P2 Hypothetical protein Atu4765 %28507 aa%29. FASTA: opt: 1800 Z-score: 2192.9 415.3 E%28%29: 3e-114 Smith-Waterman score: 1800%3B 53.608identity in 485 aa overlap. ORF ftt0847;Dbxref=GOA:Q5NGJ2,InterPro:IPR007357,UniProtKB%2FTrEMBL:Q5NGJ2,Genbank:YP_169850.1,GeneID:3191738;gbkey=CDS;product=hypothetical protein;protein_id=YP_169850.1;transl_table=11
NC_006570.2	RefSeq	gene	862158	862295	.	+	.	ID=gene863;Name=FTT_0848;Dbxref=GeneID:3191736;gbkey=Gene;locus_tag=FTT_0848
NC_006570.2	RefSeq	CDS	862158	862295	.	+	0	ID=cds767;Name=YP_169851.1;Parent=gene863;Note=Similar to Q8P3G1 Hypothetical protein XCC4110 from Xanthomonas campestris %2851 aa%29. FASTA: opt: 243 Z-score: 366.5 E%28%29: 1.6e-12 Smith-Waterman score: 243%3B 63.636 identity in 44 aa overlap ORF ftt0848;Dbxref=InterPro:IPR017136,UniProtKB%2FTrEMBL:Q5NGJ1,Genbank:YP_169851.1,GeneID:3191736;gbkey=CDS;product=hypothetical protein;protein_id=YP_169851.1;transl_table=11
NC_006570.2	RefSeq	gene	862421	863350	.	+	.	ID=gene864;Name=FTT_0849;Dbxref=GeneID:3191737;gbkey=Gene;locus_tag=FTT_0849
NC_006570.2	RefSeq	CDS	862421	863350	.	+	0	ID=cds768;Name=YP_169852.1;Parent=gene864;Note=Similar to Q81YH5 Bile acid transporter family protein from Bacillus anthracis %28322 aa%29. FASTA: initn: 551 init1: 399 opt: 605 Z-score: 641.1 E%28%29: 8.1e-28 Smith-Waterman score: 605%3B 32.432identity in 296 aa overlap. ORF ftt0849;Dbxref=GOA:Q5NGJ0,InterPro:IPR002657,UniProtKB%2FTrEMBL:Q5NGJ0,Genbank:YP_169852.1,GeneID:3191737;gbkey=CDS;product=bile acid symporter family protein;protein_id=YP_169852.1;transl_table=11
NC_006570.2	RefSeq	gene	863400	864023	.	+	.	ID=gene865;Name=FTT_0850;Dbxref=GeneID:3191735;gbkey=Gene;locus_tag=FTT_0850
NC_006570.2	RefSeq	CDS	863400	864023	.	+	0	ID=cds769;Name=YP_169853.1;Parent=gene865;Note=Similar to Q930D7 Hypothetical protein RA0261 Rhizobium meliloti %28222 aa%29. FASTA: opt: 521 Z-score: 614.9 E%28%29: 2.3e-26 Smith-Waterman score: 521%3B 42.424 identity in 198 aa overlap. ORF ftt0850;Dbxref=InterPro:IPR013559,UniProtKB%2FTrEMBL:Q5NGI9,Genbank:YP_169853.1,GeneID:3191735;gbkey=CDS;product=hypothetical protein;protein_id=YP_169853.1;transl_table=11
NC_006570.2	RefSeq	gene	864047	864805	.	+	.	ID=gene866;Name=FTT_0851;Dbxref=GeneID:3191740;gbkey=Gene;locus_tag=FTT_0851
NC_006570.2	RefSeq	CDS	864047	864805	.	+	0	ID=cds770;Name=YP_169854.1;Parent=gene866;Note=Similar to Q83C04 Membrane protein%2C  from Coxiella burnetii %28263 aa%29. FASTA: opt: 338 Z-score: 387.6 E%28%29: 1.1e-13 Smith-Waterman score: 341%3B 28.625 identity in 269 aa overlap. ORF ftt0851;Dbxref=GOA:Q5NGI8,InterPro:IPR002781,UniProtKB%2FTrEMBL:Q5NGI8,Genbank:YP_169854.1,GeneID:3191740;gbkey=CDS;product=hypothetical protein;protein_id=YP_169854.1;transl_table=11
NC_006570.2	RefSeq	gene	864851	864937	.	+	.	ID=gene867;Name=tRNA-Ser %28GGA%29;Dbxref=GeneID:3192269;description=tRNA-Ser %28GGA%29;gbkey=Gene;gene=tRNA-Ser %28GGA%29;locus_tag=FTT_t16
NC_006570.2	RefSeq	tRNA	864851	864937	.	+	.	ID=rna16;Dbxref=GeneID:3192269;codons=5;gbkey=tRNA;product=tRNA-Ser
NC_006570.2	RefSeq	exon	864851	864937	.	+	.	ID=id129;Parent=rna16;Dbxref=GeneID:3192269;codons=5;gbkey=tRNA;product=tRNA-Ser
NC_006570.2	RefSeq	gene	865343	866325	.	+	.	ID=gene868;Name=FTT_0852;Dbxref=GeneID:3191734;gbkey=Gene;locus_tag=FTT_0852;pseudo=true
NC_006570.2	RefSeq	gene	866499	867737	.	+	.	ID=gene869;Name=FTT_0853;Dbxref=GeneID:3191733;gbkey=Gene;locus_tag=FTT_0853
NC_006570.2	RefSeq	CDS	866499	867737	.	+	0	ID=cds771;Name=YP_169855.1;Parent=gene869;Note=Similar to Q8PY17 Arsenite permease from Methanosarcina mazei %28420 aa%29. FASTA: opt: 1294 Z-score: 1359.3 E%28%29: 8e-68 Smith-Waterman score: 1294%3B 49.144 identity in 409 aa overlap. ORF ftt0853;Dbxref=GOA:Q5NGI7,InterPro:IPR004680,UniProtKB%2FTrEMBL:Q5NGI7,Genbank:YP_169855.1,GeneID:3191733;gbkey=CDS;product=arsenite permease family protein;protein_id=YP_169855.1;transl_table=11
NC_006570.2	RefSeq	gene	867716	868138	.	-	.	ID=gene870;Name=FTT_0854c;Dbxref=GeneID:3191732;gbkey=Gene;locus_tag=FTT_0854c
NC_006570.2	RefSeq	CDS	867716	868138	.	-	0	ID=cds772;Name=YP_169856.1;Parent=gene870;Note=Similar to Q8EM34 Hypothetical conserved protein from Oceanobacillus iheyensis %28123 aa%29. FASTA: opt: 271 Z-score: 341.6 E%28%29: 3.9e-11 Smith-Waterman score: 271%3B 37.190 identity in 121 aa overlap. ORF ftt0854c;Dbxref=InterPro:IPR006696,UniProtKB%2FTrEMBL:Q5NGI6,Genbank:YP_169856.1,GeneID:3191732;gbkey=CDS;product=hypothetical protein;protein_id=YP_169856.1;transl_table=11
NC_006570.2	RefSeq	gene	868158	868517	.	-	.	ID=gene871;Name=FTT_0855c;Dbxref=GeneID:3191731;gbkey=Gene;locus_tag=FTT_0855c
NC_006570.2	RefSeq	CDS	868158	868517	.	-	0	ID=cds773;Name=YP_169857.1;Parent=gene871;Note=Weakly similar to Q9KR35 Hypothetical protein VC1812 from Vibrio cholerae %28139 aa%29. FASTA: opt: 184 Z-score: 256.0 E%28%29: 2.3e-06 Smith-Waterman score: 184%3B 29.245 identity in 106 aa overlap. ORF ftt0855c;Dbxref=InterPro:IPR007263,UniProtKB%2FTrEMBL:Q5NGI5,Genbank:YP_169857.1,GeneID:3191731;gbkey=CDS;product=hypothetical protein;protein_id=YP_169857.1;transl_table=11
NC_006570.2	RefSeq	gene	868531	869385	.	-	.	ID=gene872;Name=ubiA;Dbxref=GeneID:3192470;gbkey=Gene;gene=ubiA;locus_tag=FTT_0856c
NC_006570.2	RefSeq	CDS	868531	869385	.	-	0	ID=cds774;Name=YP_169858.1;Parent=gene872;Note=UbiA prenyltransferase family catalyzes the transfer of a prenyl group to various acceptors with hydrophobic ring structures in the biosynthesis of respiratory quinones%2C hemes%2C chlorophylls%2C vitamin E%2C and shikonin;Dbxref=GOA:Q5NGI4,InterPro:IPR006370,UniProtKB%2FSwiss-Prot:Q5NGI4,Genbank:YP_169858.1,GeneID:3192470;gbkey=CDS;product=4-hydroxybenzoate polyprenyltransferase;protein_id=YP_169858.1;transl_table=11
NC_006570.2	RefSeq	gene	869388	869894	.	-	.	ID=gene873;Name=FTT_0857c;Dbxref=GeneID:3191729;gbkey=Gene;locus_tag=FTT_0857c
NC_006570.2	RefSeq	CDS	869388	869894	.	-	0	ID=cds775;Name=YP_169859.1;Parent=gene873;Note=Weakly similar to similar to Q83F94 Chorismate--pyruvate lyase%2C  from Coxiella burnetii %28185 aa%29. FASTA: opt: 178 Z-score: 231.0 E%28%29: 5.6e-05 Smith-Waterman score: 178%3B 27.215identity in 158 aa overlap ORF ftt0857c;Dbxref=GOA:Q5NGI3,InterPro:IPR007440,UniProtKB%2FTrEMBL:Q5NGI3,Genbank:YP_169859.1,GeneID:3191729;gbkey=CDS;product=hypothetical protein;protein_id=YP_169859.1;transl_table=11
NC_006570.2	RefSeq	gene	869993	870700	.	+	.	ID=gene874;Name=rph;Dbxref=GeneID:3192025;gbkey=Gene;gene=rph;locus_tag=FTT_0858
NC_006570.2	RefSeq	CDS	869993	870700	.	+	0	ID=cds776;Name=YP_169860.1;Parent=gene874;Note=RNase PH%3B tRNA nucleotidyltransferase%3B forms hexamers in Bacillus subtilis%3B phosphoroltic 3%27-5%27 exoribonuclease%3B involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs;Dbxref=GOA:Q5NGI2,InterPro:IPR018336,UniProtKB%2FSwiss-Prot:Q5NGI2,Genbank:YP_169860.1,GeneID:3192025;gbkey=CDS;product=ribonuclease PH;protein_id=YP_169860.1;transl_table=11
NC_006570.2	RefSeq	gene	870754	871077	.	-	.	ID=gene875;Name=FTT_0859c;Dbxref=GeneID:3191728;gbkey=Gene;locus_tag=FTT_0859c
NC_006570.2	RefSeq	CDS	870754	871077	.	-	0	ID=cds777;Name=YP_169861.1;Parent=gene875;Note=ORF ftt0859c;Dbxref=UniProtKB%2FTrEMBL:Q5NGI1,Genbank:YP_169861.1,GeneID:3191728;gbkey=CDS;product=hypothetical protein;protein_id=YP_169861.1;transl_table=11
NC_006570.2	RefSeq	gene	871182	871433	.	-	.	ID=gene876;Name=FTT_0860c;Dbxref=GeneID:3191726;gbkey=Gene;locus_tag=FTT_0860c
NC_006570.2	RefSeq	CDS	871182	871433	.	-	0	ID=cds778;Name=YP_169862.1;Parent=gene876;Note=ORF ftt0860c;Dbxref=UniProtKB%2FTrEMBL:Q5NGI0,Genbank:YP_169862.1,GeneID:3191726;gbkey=CDS;product=hypothetical protein;protein_id=YP_169862.1;transl_table=11
NC_006570.2	RefSeq	gene	871496	872089	.	-	.	ID=gene877;Name=FTT_0861c;Dbxref=GeneID:3191727;gbkey=Gene;locus_tag=FTT_0861c
NC_006570.2	RefSeq	CDS	871496	872089	.	-	0	ID=cds779;Name=YP_169863.1;Parent=gene877;Note=Similar to FMA2_BACNO %28P17824%29 Fimbrial protein precursor %28Pilin%29 from Bacteroides nodosus %28Dichelobacter nodosus%29 %28160 aa%29. FASTA: opt: 169 Z-score: 222.1 E%28%29: 0.00018 Smith-Waterman score: 169%3B 34.646 identity in 127 aa overlap The pili fiber building block protein has a highly distinct primary structure%3B a short positively charged leader sequence%2C and a highly conserved and highly hydrophobic amino-terminal domain which forms the core of the pilus fiber%3B A variety of studies suggest that the invariant glycine %28G%29 at -1 is required for prepilin cleavage and assembly and that the glutamate %28E%29 at %2B 5 is essential for assembly and efficient N-terminal methylation but not cleavage. The region near the carboxy terminus is often hydrophilic and is stabilized by one or two disulfide bridges that may be involved in recognition of receptors. The genes with these characteristics are usually termed pilA%2C pilE%2C pilV%2C pilW%2C pilX and FimU. %28Mattick John S.. %27Type IV Pili and twitching motility%27. Annu. Rev. Microbiol. 2002. 56:289-314.%29 This protein has all the characteristics described above%2C but shows a weak global homology. ORF ftt0861c;Dbxref=InterPro:IPR012902,UniProtKB%2FTrEMBL:Q5NGH9,Genbank:YP_169863.1,GeneID:3191727;gbkey=CDS;product=Type IV pili fiber building block protein;protein_id=YP_169863.1;transl_table=11
NC_006570.2	RefSeq	gene	872194	873267	.	-	.	ID=gene878;Name=htpX;Dbxref=GeneID:3191549;gbkey=Gene;gene=htpX;locus_tag=FTT_0862c
NC_006570.2	RefSeq	CDS	872194	873267	.	-	0	ID=cds780;Name=YP_169864.1;Parent=gene878;Note=metalloprotease;Dbxref=GOA:Q5NGH8,InterPro:IPR001915,UniProtKB%2FTrEMBL:Q5NGH8,Genbank:YP_169864.1,GeneID:3191549;gbkey=CDS;product=heat shock protein HtpX;protein_id=YP_169864.1;transl_table=11
NC_006570.2	RefSeq	gene	873271	873846	.	-	.	ID=gene879;Name=FTT_0863c;Dbxref=GeneID:3191725;gbkey=Gene;locus_tag=FTT_0863c
NC_006570.2	RefSeq	CDS	873271	873846	.	-	0	ID=cds781;Name=YP_169865.1;Parent=gene879;Note=Similar to Q83DZ3 LemA protein from Coxiella burnetii %28192 aa%29 initn: 723 init1: 655 opt: 732 Z-score: 803.2 bits: 155.4 E%28%29: 7.6e-37 Smith-Waterman score: 732%3B 60.417 identity in 192 aa overlap. ORF ftt0863c;Dbxref=InterPro:IPR007156,UniProtKB%2FTrEMBL:Q5NGH7,Genbank:YP_169865.1,GeneID:3191725;gbkey=CDS;product=LemA-like protein;protein_id=YP_169865.1;transl_table=11
NC_006570.2	RefSeq	gene	873894	874790	.	-	.	ID=gene880;Name=FTT_0864c;Dbxref=GeneID:3191724;gbkey=Gene;locus_tag=FTT_0864c
NC_006570.2	RefSeq	CDS	873894	874790	.	-	0	ID=cds782;Name=YP_169866.1;Parent=gene880;Note=Similar to Q87XZ5 Transcriptional regulator%2C LysR family%2C from Pseudomonas syringae %28308 aa%29. FASTA: opt: 591 Z-score: 726.5 E%28%29: 1.4e-32 Smith-Waterman score: 591%3B 34.948 identity in 289 aa overlap. ORF ftt0864c;Dbxref=GOA:Q5NGH6,InterPro:IPR011991,UniProtKB%2FTrEMBL:Q5NGH6,Genbank:YP_169866.1,GeneID:3191724;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=YP_169866.1;transl_table=11
NC_006570.2	RefSeq	gene	874929	875982	.	+	.	ID=gene881;Name=FTT_0865;Dbxref=GeneID:3191723;gbkey=Gene;locus_tag=FTT_0865;pseudo=true
NC_006570.2	RefSeq	gene	875990	879016	.	-	.	ID=gene882;Name=FTT_0866c;Dbxref=GeneID:3191722;gbkey=Gene;locus_tag=FTT_0866c;pseudo=true
NC_006570.2	RefSeq	repeat_region	876670	876688	.	+	.	ID=id130;Note=ISFtu2 19bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	gene	876765	877508	.	+	.	ID=gene883;Name=isftu2;Dbxref=GeneID:3190911;gbkey=Gene;gene=isftu2;locus_tag=FTT_0867
NC_006570.2	RefSeq	CDS	876765	877508	.	+	0	ID=cds783;Name=YP_169867.1;Parent=gene883;Note=ISFtu2. Transposase%2C member of the IS5 family. Identical to Q8GM03  transposase from Francisella tularensis %28247 aa%29.;Dbxref=GOA:Q8GM03,InterPro:IPR002559,UniProtKB%2FTrEMBL:Q8GM03,Genbank:YP_169867.1,GeneID:3190911;gbkey=CDS;product=transposase;protein_id=YP_169867.1;transl_table=11
NC_006570.2	RefSeq	repeat_region	877516	877534	.	+	.	ID=id131;Note=ISFtu2 19bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	gene	879013	879378	.	-	.	ID=gene884;Name=FTT_0868c;Dbxref=GeneID:3191721;gbkey=Gene;locus_tag=FTT_0868c
NC_006570.2	RefSeq	CDS	879013	879378	.	-	0	ID=cds784;Name=YP_169868.1;Parent=gene884;Note=Similar to Q9RA93 ArsR from Sinorhizobium sp. As4 %28115 aa%29. FASTA: opt: 185 Z-score: 259.0 bits: 53.3 E%28%29: 1.6e-06 Smith-Waterman score: 185%3B 27.184 identity in 103 aa overlap. ORF ftt0868c;Dbxref=GOA:Q5NGH4,InterPro:IPR011991,UniProtKB%2FTrEMBL:Q5NGH4,Genbank:YP_169868.1,GeneID:3191721;gbkey=CDS;product=arsenical restistance operon repressor;protein_id=YP_169868.1;transl_table=11
NC_006570.2	RefSeq	gene	879521	880174	.	+	.	ID=gene885;Name=FTT_0869;Dbxref=GeneID:3191720;gbkey=Gene;locus_tag=FTT_0869
NC_006570.2	RefSeq	CDS	879521	880174	.	+	0	ID=cds785;Name=YP_169869.1;Parent=gene885;Note=ORF ftt0869;Dbxref=UniProtKB%2FTrEMBL:Q5NGH3,Genbank:YP_169869.1,GeneID:3191720;gbkey=CDS;product=hypothetical protein;protein_id=YP_169869.1;transl_table=11
NC_006570.2	RefSeq	gene	880186	880317	.	-	.	ID=gene886;Name=FTT_0870c;Dbxref=GeneID:3191718;gbkey=Gene;locus_tag=FTT_0870c
NC_006570.2	RefSeq	CDS	880186	880317	.	-	0	ID=cds786;Name=YP_169870.1;Parent=gene886;Note=ORF ftt0870c;Dbxref=UniProtKB%2FTrEMBL:Q5NGH2,Genbank:YP_169870.1,GeneID:3191718;gbkey=CDS;product=hypothetical protein;protein_id=YP_169870.1;transl_table=11
NC_006570.2	RefSeq	gene	880494	881492	.	+	.	ID=gene887;Name=gpsA;Dbxref=GeneID:3192551;gbkey=Gene;gene=gpsA;locus_tag=FTT_0871
NC_006570.2	RefSeq	CDS	880494	881492	.	+	0	ID=cds787;Name=YP_169871.1;Parent=gene887;Note=catalyzes the NAD%28P%29H-dependent reduction of glycerol 3-phosphate to glycerone phosphate;Dbxref=GOA:Q5NGH1,InterPro:IPR016040,UniProtKB%2FSwiss-Prot:Q5NGH1,Genbank:YP_169871.1,GeneID:3192551;gbkey=CDS;product=NAD%28P%29H-dependent glycerol-3-phosphate dehydrogenase;protein_id=YP_169871.1;transl_table=11
NC_006570.2	RefSeq	gene	881493	882029	.	-	.	ID=gene888;Name=FTT_0872c;Dbxref=GeneID:3191717;gbkey=Gene;locus_tag=FTT_0872c
NC_006570.2	RefSeq	CDS	881493	882029	.	-	0	ID=cds788;Name=YP_169872.1;Parent=gene888;Note=ORF ftt0872c;Dbxref=GOA:Q5NGH0,InterPro:IPR003825,UniProtKB%2FTrEMBL:Q5NGH0,Genbank:YP_169872.1,GeneID:3191717;gbkey=CDS;product=hypothetical protein;protein_id=YP_169872.1;transl_table=11
NC_006570.2	RefSeq	gene	882034	883404	.	-	.	ID=gene889;Name=radA;Dbxref=GeneID:3191647;gbkey=Gene;gene=radA;locus_tag=FTT_0873c
NC_006570.2	RefSeq	CDS	882034	883404	.	-	0	ID=cds789;Name=YP_169873.1;Parent=gene889;Note=Sms%3B stabilizes the strand-invasion intermediate during the DNA repair%3B involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents;Dbxref=GOA:Q5NGG9,InterPro:IPR004504,UniProtKB%2FTrEMBL:Q5NGG9,Genbank:YP_169873.1,GeneID:3191647;gbkey=CDS;product=DNA repair protein RadA;protein_id=YP_169873.1;transl_table=11
NC_006570.2	RefSeq	gene	883412	884182	.	-	.	ID=gene890;Name=FTT_0874c;Dbxref=GeneID:3191715;gbkey=Gene;locus_tag=FTT_0874c
NC_006570.2	RefSeq	CDS	883412	884182	.	-	0	ID=cds790;Name=YP_169874.1;Parent=gene890;Note=ORF ftt0874c;Dbxref=UniProtKB%2FTrEMBL:Q5NGG8,Genbank:YP_169874.1,GeneID:3191715;gbkey=CDS;product=hypothetical protein;protein_id=YP_169874.1;transl_table=11
NC_006570.2	RefSeq	gene	884179	884778	.	-	.	ID=gene891;Name=FTT_0875c;Dbxref=GeneID:3191716;gbkey=Gene;locus_tag=FTT_0875c
NC_006570.2	RefSeq	CDS	884179	884778	.	-	0	ID=cds791;Name=YP_169875.1;Parent=gene891;Note=Similar to YOHD_ECOLI %28P33366%29 Hypothetical protein yohD from Escherichia coli %28192 aa%29. FASTA: opt: 311 Z-score: 379.7 bits: 77.1 E%28%29: 2.9e-13 Smith-Waterman score: 311%3B 24.870 identity %2825.806 ungapped%29 in 193 aa overlap. ORF ftt0875c;Dbxref=InterPro:IPR015414,UniProtKB%2FTrEMBL:Q5NGG7,Genbank:YP_169875.1,GeneID:3191716;gbkey=CDS;product=hypothetical protein;protein_id=YP_169875.1;transl_table=11
NC_006570.2	RefSeq	gene	884781	885839	.	-	.	ID=gene892;Name=aroC;Dbxref=GeneID:3190943;gbkey=Gene;gene=aroC;locus_tag=FTT_0876c
NC_006570.2	RefSeq	CDS	884781	885839	.	-	0	ID=cds792;Name=YP_169876.1;Parent=gene892;Note=catalyzes the formation of chorismate from 5-O-%281-carboxyvinyl%29-3-phosphoshikimate in aromatic amino acid biosynthesis;Dbxref=GOA:Q5NGG6,InterPro:IPR000453,UniProtKB%2FSwiss-Prot:Q5NGG6,Genbank:YP_169876.1,GeneID:3190943;gbkey=CDS;product=chorismate synthase;protein_id=YP_169876.1;transl_table=11
NC_006570.2	RefSeq	gene	886004	886633	.	-	.	ID=gene893;Name=FTT_0877c;Dbxref=GeneID:3191714;gbkey=Gene;locus_tag=FTT_0877c
NC_006570.2	RefSeq	CDS	886004	886633	.	-	0	ID=cds793;Name=YP_169877.1;Parent=gene893;Note=ORF ftt0877c;Dbxref=InterPro:IPR006603,UniProtKB%2FTrEMBL:Q5NGG5,Genbank:YP_169877.1,GeneID:3191714;gbkey=CDS;product=hypothetical protein;protein_id=YP_169877.1;transl_table=11
NC_006570.2	RefSeq	gene	886652	887164	.	-	.	ID=gene894;Name=msrB;Dbxref=GeneID:3191245;gbkey=Gene;gene=msrB;locus_tag=FTT_0878c
NC_006570.2	RefSeq	CDS	886652	887164	.	-	0	ID=cds794;Name=YP_169878.1;Parent=gene894;Note=this stereospecific enzymes reduces the R isomer of methionine sulfoxide while MsrA reduces the S form%3B provides protection against oxidative stress;Dbxref=GOA:Q5NGG4,InterPro:IPR002579,UniProtKB%2FTrEMBL:Q5NGG4,Genbank:YP_169878.1,GeneID:3191245;gbkey=CDS;product=methionine sulfoxide reductase B;protein_id=YP_169878.1;transl_table=11
NC_006570.2	RefSeq	gene	887325	887882	.	+	.	ID=gene895;Name=sodC;Dbxref=GeneID:3190715;gbkey=Gene;gene=sodC;locus_tag=FTT_0879
NC_006570.2	RefSeq	CDS	887325	887882	.	+	0	ID=cds795;Name=YP_169879.1;Parent=gene895;Note=superoxide dismutase %28Cu-Zn%29 precusor. Identical to SODC_FRATU from F. tularensis LVS.;Dbxref=GOA:Q5NGG3,InterPro:IPR018152,UniProtKB%2FTrEMBL:Q5NGG3,Genbank:YP_169879.1,GeneID:3190715;gbkey=CDS;product=superoxide dismuate %28Cu-Zn%29 precusor;protein_id=YP_169879.1;transl_table=11
NC_006570.2	RefSeq	gene	887886	888675	.	+	.	ID=gene896;Name=FTT_0880;Dbxref=GeneID:3191713;gbkey=Gene;locus_tag=FTT_0880;pseudo=true
NC_006570.2	RefSeq	gene	888650	890044	.	-	.	ID=gene897;Name=FTT_0881c;Dbxref=GeneID:3191712;gbkey=Gene;locus_tag=FTT_0881c
NC_006570.2	RefSeq	CDS	888650	890044	.	-	0	ID=cds796;Name=YP_169880.1;Parent=gene897;Note=Similar to AAP09927 Arginine permease from Bacillus cereus %28474 aa%29. FASTA: opt: 1041 Z-score: 1224.1 E%28%29: 2.5e-60 Smith-Waterman score: 1041%3B 35.604 identity in 455 aa overlap. ORF ftt0881c;Dbxref=GOA:Q5NGG2,InterPro:IPR004841,UniProtKB%2FTrEMBL:Q5NGG2,Genbank:YP_169880.1,GeneID:3191712;gbkey=CDS;product=amino acid permease;protein_id=YP_169880.1;transl_table=11
NC_006570.2	RefSeq	gene	890182	890556	.	+	.	ID=gene898;Name=FTT_0882;Dbxref=GeneID:3191710;gbkey=Gene;locus_tag=FTT_0882;pseudo=true
NC_006570.2	RefSeq	gene	890649	891757	.	+	.	ID=gene899;Name=FTT_0883;Dbxref=GeneID:3191709;gbkey=Gene;locus_tag=FTT_0883;pseudo=true
NC_006570.2	RefSeq	gene	891809	892999	.	-	.	ID=gene900;Name=aspC1;Dbxref=GeneID:3190956;gbkey=Gene;gene=aspC1;locus_tag=FTT_0884c
NC_006570.2	RefSeq	CDS	891809	892999	.	-	0	ID=cds797;Name=YP_169881.1;Parent=gene900;Note=catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate;Dbxref=GOA:Q5NGG1,InterPro:IPR015421,UniProtKB%2FTrEMBL:Q5NGG1,Genbank:YP_169881.1,GeneID:3190956;gbkey=CDS;product=aspartate aminotransferase;protein_id=YP_169881.1;transl_table=11
NC_006570.2	RefSeq	gene	893288	894067	.	+	.	ID=gene901;Name=FTT_0885;Dbxref=GeneID:3191707;gbkey=Gene;locus_tag=FTT_0885
NC_006570.2	RefSeq	CDS	893288	894067	.	+	0	ID=cds798;Name=YP_169882.1;Parent=gene901;Note=Similar to Q8D6R6 Predicted Co%2FZn%2FCd cation transporter from Vibrio vulnificus %28297 aa%29. FASTA: opt: 344 Z-score: 414.1 E%28%29: 3.3e-15 Smith-Waterman score: 344%3B 25.296 identity in 253 aa overlap. ORF ftt0885;Dbxref=GOA:Q5NGG0,InterPro:IPR002524,UniProtKB%2FTrEMBL:Q5NGG0,Genbank:YP_169882.1,GeneID:3191707;gbkey=CDS;product=cation transporter;protein_id=YP_169882.1;transl_table=11
NC_006570.2	RefSeq	gene	894173	895822	.	+	.	ID=gene902;Name=FTT_0886;Dbxref=GeneID:3191706;gbkey=Gene;locus_tag=FTT_0886
NC_006570.2	RefSeq	CDS	894173	895822	.	+	0	ID=cds799;Name=YP_169883.1;Parent=gene902;Note=Similar to P52118 DNA repair protein recN %28Recombination protein %28554 aa%29 fasta scores%3B opt: 1371 Z-score: 1221.7 E%28%29: 3.4e-60 Smith-Waterman score: 1371%3B 39.674 identity in 552 aa overlap. ORF ftt0886;Dbxref=GOA:Q5NGF9,InterPro:IPR004604,UniProtKB%2FTrEMBL:Q5NGF9,Genbank:YP_169883.1,GeneID:3191706;gbkey=CDS;product=DNA repair protein recN;protein_id=YP_169883.1;transl_table=11
NC_006570.2	RefSeq	gene	896394	896768	.	-	.	ID=gene903;Name=FTT_0887c;Dbxref=GeneID:3191705;gbkey=Gene;locus_tag=FTT_0887c
NC_006570.2	RefSeq	CDS	896394	896768	.	-	0	ID=cds800;Name=YP_169884.1;Parent=gene903;Note=ORF ftt0887c;Dbxref=UniProtKB%2FTrEMBL:Q5NGF8,Genbank:YP_169884.1,GeneID:3191705;gbkey=CDS;product=hypothetical protein;protein_id=YP_169884.1;transl_table=11
NC_006570.2	RefSeq	gene	896761	897357	.	-	.	ID=gene904;Name=FTT_0888c;Dbxref=GeneID:3191703;gbkey=Gene;locus_tag=FTT_0888c
NC_006570.2	RefSeq	CDS	896761	897357	.	-	0	ID=cds801;Name=YP_169885.1;Parent=gene904;Note=Similar to Q59607 Pilin precursor from Neisseria gonorrhoeae %28169 aa%29. FASTA: opt: 244 Z-score: 305.7 E%28%29: 3.5e-09 Smith-Waterman score: 244%3B 30.435 identity in 138 aa overlap. The pili fiber building block protein has a highly distinct primary structure%3B a short positively charged leader sequence%2C and a highly conserved and highly hydrophobic amino-terminal domain which forms the core of the pilus fiber%3B A variety of studies suggest that the invariant glycine %28G%29 at -1 is required for prepilin cleavage and assembly and that the glutamate %28E%29 at %2B 5 is essential for assembly and efficient N-terminal methylation but not cleavage. The region near the carboxy terminus is often hydrophilic and is stabilized by one or two disulfide bridges that may be involved in recognition of receptors. The genes with these characteristics are usually termed pilA%2C pilE%2C pilV%2C pilW%2C pilX and FimU. %28Mattick John S.. %27Type IV Pili and twitching motility%27. Annu. Rev. Microbiol. 2002. 56:289-314.%29 This protein has all the characteristics described above. ORF ftt0888c;Dbxref=InterPro:IPR012902,UniProtKB%2FTrEMBL:Q5NGF7,Genbank:YP_169885.1,GeneID:3191703;gbkey=CDS;product=Type IV pili fiber building block protein;protein_id=YP_169885.1;transl_table=11
NC_006570.2	RefSeq	gene	898027	898467	.	-	.	ID=gene905;Name=FTT_0889c;Dbxref=GeneID:3191704;gbkey=Gene;locus_tag=FTT_0889c
NC_006570.2	RefSeq	CDS	898027	898467	.	-	0	ID=cds802;Name=YP_169886.1;Parent=gene905;Note=Similar to Q820M2 Fimbrial protein pilin:bacterial general secretion pathway protein H from Nitrosomonas europaea %28136 aa%29. FASTA: opt: 216 Z-score: 280.1 E%28%29: 1e-07 Smith-Waterman score: 218%3B 32.639 identity in 144 aa overlap. The pili fiber building block protein has a highly distinct primary structure%3B a short positively charged leader sequence%2C and a highly conserved and highly hydrophobic amino-terminal domain which forms the core of the pilus fiber%3B A variety of studies suggest that the invariant glycine %28G%29 at -1 is required for prepilin cleavage and assembly and that the glutamate %28E%29 at %2B 5 is essential for assembly and efficient N-terminal methylation but not cleavage. The region near the carboxy terminus is often hydrophilic and is stabilized by one or two disulfide bridges that may be involved in recognition of receptors. The genes with these characteristics are usually termed pilA%2C pilE%2C pilV%2C pilW%2C pilX and FimU. %28Mattick John S.. %27Type IV Pili and twitching motility%27. Annu. Rev. Microbiol. 2002. 56:289-314.%29 This protein has all the characteristics described above. ORF ftt0889c;Dbxref=InterPro:IPR012902,UniProtKB%2FTrEMBL:Q5NGF6,Genbank:YP_169886.1,GeneID:3191704;gbkey=CDS;product=Type IV pili fiber building block protein;protein_id=YP_169886.1;transl_table=11
NC_006570.2	RefSeq	gene	898598	899005	.	-	.	ID=gene906;Name=FTT_0890c;Dbxref=GeneID:3191700;gbkey=Gene;locus_tag=FTT_0890c
NC_006570.2	RefSeq	CDS	898598	899005	.	-	0	ID=cds803;Name=YP_169887.1;Parent=gene906;Note=Similar to Q8Y1X9 Type 4 fimbrial pilin signal peptide protein from Ralstonia solanacearum %28168 aa%29. FASTA: opt: 278 Z-score: 327.6 E%28%29: 2.1e-10 Smith-Waterman score: 292%3B 38.095identity in 147 aa overlap. The pili fiber building block protein has a highly distinct primary structure%3B a short positively charged leader sequence%2C and a highly conserved and highly hydrophobic amino-terminal domain which forms the core of the pilus fiber%3B A variety of studies suggest that the invariant glycine %28G%29 at -1 is required for prepilin cleavage and assembly and that the glutamate %28E%29 at %2B 5 is essential for assembly and efficient N-terminal methylation but not cleavage. The region near the carboxy terminus is often hydrophilic and is stabilized by one or two disulfide bridges that may be involved in recognition of receptors. The genes with these characteristics are usually termed pilA%2C pilE%2C pilV%2C pilW%2C pilX and FimU. %28Mattick John S.. %27Type IV Pili and twitching motility%27. Annu. Rev. Microbiol. 2002. 56:289-314.%29 This protein has all the characteristics described above. ORF ftt0890c;Dbxref=InterPro:IPR012902,UniProtKB%2FTrEMBL:Q5NGF5,Genbank:YP_169887.1,GeneID:3191700;gbkey=CDS;product=Type IV pili fiber building block protein;protein_id=YP_169887.1;transl_table=11
NC_006570.2	RefSeq	gene	899389	900108	.	+	.	ID=gene907;Name=FTT_0891;Dbxref=GeneID:3191699;gbkey=Gene;locus_tag=FTT_0891
NC_006570.2	RefSeq	CDS	899389	900108	.	+	0	ID=cds804;Name=YP_169888.1;Parent=gene907;Note=Similar to Q98NS1 Hypothetical protein mlr0012 from Rhizobium loti %28244 aa%29. FASTA: opt: 327 Z-score: 404.4 bits: 82.2 E%28%29: 1.2e-14 Smith-Waterman score: 327%3B 32.308 identity in 195 aa overlap. ORF ftt0891;Dbxref=GOA:Q5NGF4,InterPro:IPR016118,UniProtKB%2FTrEMBL:Q5NGF4,Genbank:YP_169888.1,GeneID:3191699;gbkey=CDS;product=hypothetical protein;protein_id=YP_169888.1;transl_table=11
NC_006570.2	RefSeq	gene	900247	901095	.	+	.	ID=gene908;Name=folD;Dbxref=GeneID:3191934;gbkey=Gene;gene=folD;locus_tag=FTT_0892
NC_006570.2	RefSeq	CDS	900247	901095	.	+	0	ID=cds805;Name=YP_169889.1;Parent=gene908;Note=catalyzes the formation of 5%2C10-methenyltetrahydrofolate from 5%2C10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5%2C10-methenyltetrahydrofolate;Dbxref=GOA:Q5NGF3,InterPro:IPR016040,UniProtKB%2FSwiss-Prot:Q5NGF3,Genbank:YP_169889.1,GeneID:3191934;gbkey=CDS;product=bifunctional 5%2C10-methylene-tetrahydrofolate dehydrogenase%2F 5%2C10-methylene-tetrahydrofolate cyclohydrolase;protein_id=YP_169889.1;transl_table=11
NC_006570.2	RefSeq	gene	901329	902372	.	+	.	ID=gene909;Name=purM;Dbxref=GeneID:3191664;gbkey=Gene;gene=purM;locus_tag=FTT_0893
NC_006570.2	RefSeq	CDS	901329	902372	.	+	0	ID=cds806;Name=YP_169890.1;Parent=gene909;Note=catalyzes the formation of 1-%285-phosphoribosyl%29-5-aminoimidazole from 2-%28formamido%29-N1-%285-phosphoribosyl%29acetamidine and ATP in purine biosynthesis;Dbxref=GOA:Q5NGF2,InterPro:IPR010918,UniProtKB%2FTrEMBL:Q5NGF2,Genbank:YP_169890.1,GeneID:3191664;gbkey=CDS;product=phosphoribosylaminoimidazole synthetase;protein_id=YP_169890.1;transl_table=11
NC_006570.2	RefSeq	gene	902372	904684	.	+	.	ID=gene910;Name=purCD;Dbxref=GeneID:3191239;gbkey=Gene;gene=purCD;locus_tag=FTT_0894
NC_006570.2	RefSeq	CDS	902372	904684	.	+	0	ID=cds807;Name=YP_169891.1;Parent=gene910;Note=Amino acids 1-327 %28PurC%29 similar to AAR06292 SAICAR synthetase from Nicotiana tabacum %28399 aa%29. BLAST: Expect %3D e-105 Identities %3D 187%2F322 %2858%29%2C Positives %3D 236%2F322 %2873%29%2C Gaps %3D 6%2F322 %281%29. Amino acids 328-770 %28PurD%29 similar to ZP_00077753 Phosphoribosylamine-glycine ligase from Methanosarcina barkeri %28433%29. BLAST: Expect %3D e-108 Identities %3D 204%2F436 %2846%29%2C Positives %3D 285%2F436 %2865%29%2C Gaps %3D 3%2F436 %280%29;Dbxref=GOA:Q5NGF1,InterPro:IPR018236,UniProtKB%2FTrEMBL:Q5NGF1,Genbank:YP_169891.1,GeneID:3191239;gbkey=CDS;product=fusion protein PurC%2FPurD;protein_id=YP_169891.1;transl_table=11
NC_006570.2	RefSeq	gene	904688	905263	.	+	.	ID=gene911;Name=purN;Dbxref=GeneID:3191663;gbkey=Gene;gene=purN;locus_tag=FTT_0895
NC_006570.2	RefSeq	CDS	904688	905263	.	+	0	ID=cds808;Name=YP_169892.1;Parent=gene911;Note=Similar to Q8DBC3 Folate-dependent phosphoribosylglycinamide formyltransferase from Vibrio vulnificus %28212 aa%29. FASTA: opt: 530 Z-score: 633.0 E%28%29: 2.1e-27 Smith-Waterman score: 530%3B 45.263 identity in 190 aa overlap.;Dbxref=GOA:Q5NGF0,InterPro:IPR004607,UniProtKB%2FTrEMBL:Q5NGF0,Genbank:YP_169892.1,GeneID:3191663;gbkey=CDS;product=phosphoribosylglycinamide formyltransferase;protein_id=YP_169892.1;transl_table=11
NC_006570.2	RefSeq	gene	905380	905871	.	+	.	ID=gene912;Name=purE;Dbxref=GeneID:3191675;gbkey=Gene;gene=purE;locus_tag=FTT_0896
NC_006570.2	RefSeq	CDS	905380	905871	.	+	0	ID=cds809;Name=YP_169893.1;Parent=gene912;Note=Similar to P72157 Phosphoribosylaminoimidazole carboxylase catalytic subunit from Psudomonas aeruginosa %28163 aa%29. FASTA: opt: 719 Z-score: 894.1 E%28%29: 6.6e-42 Smith-Waterman score: 719%3B 70.988 identity n 162 aa overlap;Dbxref=GOA:Q5NGE9,InterPro:IPR000031,UniProtKB%2FTrEMBL:Q5NGE9,Genbank:YP_169893.1,GeneID:3191675;gbkey=CDS;product=phosphoribosylaminoimidazole carboxylase%2Ccatalyic subunit;protein_id=YP_169893.1;transl_table=11
NC_006570.2	RefSeq	gene	905875	906972	.	+	.	ID=gene913;Name=purK;Dbxref=GeneID:3191666;gbkey=Gene;gene=purK;locus_tag=FTT_0897
NC_006570.2	RefSeq	CDS	905875	906972	.	+	0	ID=cds810;Name=YP_169894.1;Parent=gene913;Note=With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway;Dbxref=GOA:Q5NGE8,InterPro:IPR013817,UniProtKB%2FTrEMBL:Q5NGE8,Genbank:YP_169894.1,GeneID:3191666;gbkey=CDS;product=phosphoribosylaminoimidazole carboxylase ATPase subunit;protein_id=YP_169894.1;transl_table=11
NC_006570.2	RefSeq	gene	906969	907322	.	-	.	ID=gene914;Name=FTT_0898c;Dbxref=GeneID:3191698;gbkey=Gene;locus_tag=FTT_0898c
NC_006570.2	RefSeq	CDS	906969	907322	.	-	0	ID=cds811;Name=YP_169895.1;Parent=gene914;Note=Similar to Q88N88 Conserved hypothetical protein TIGR002 from Pseudomonas putida %28124 aa%29. FASTA: opt: 291 Z-score: 402.6 E%28%29: 1.6e-14 Smith-Waterman score: 291%3B 38.938 identity in 113 aa overlap. ORF ftt0898c;Dbxref=GOA:Q5NGE7,InterPro:IPR003509,UniProtKB%2FSwiss-Prot:Q5NGE7,Genbank:YP_169895.1,GeneID:3191698;gbkey=CDS;product=hypothetical protein;protein_id=YP_169895.1;transl_table=11
NC_006570.2	RefSeq	gene	907389	909410	.	-	.	ID=gene915;Name=prlC;Dbxref=GeneID:3191236;gbkey=Gene;gene=prlC;locus_tag=FTT_0899c
NC_006570.2	RefSeq	CDS	907389	909410	.	-	0	ID=cds812;Name=YP_169896.1;Parent=gene915;Note=Similar to P27298 Oligopeptidase A from Escherichia coli %28680 aa%29. FASTA: opt: 1936 Z-score: 2040.0 E%28%29: 8.9e-106 Smith-Waterman score: 1936%3B 43.722 identity in 677 aa overlap.;Dbxref=GOA:Q5NGE6,InterPro:IPR001567,UniProtKB%2FTrEMBL:Q5NGE6,Genbank:YP_169896.1,GeneID:3191236;gbkey=CDS;product=oligopeptidase A;protein_id=YP_169896.1;transl_table=11
NC_006570.2	RefSeq	gene	909502	909873	.	+	.	ID=gene916;Name=FTT_0900;Dbxref=GeneID:3191697;gbkey=Gene;locus_tag=FTT_0900
NC_006570.2	RefSeq	CDS	909502	909873	.	+	0	ID=cds813;Name=YP_169897.1;Parent=gene916;Note=ORF ftt0900;Dbxref=InterPro:IPR007523,UniProtKB%2FTrEMBL:Q5NGE5,Genbank:YP_169897.1,GeneID:3191697;gbkey=CDS;product=hypothetical protein;protein_id=YP_169897.1;transl_table=11
NC_006570.2	RefSeq	gene	909954	910403	.	+	.	ID=gene917;Name=lpnA;Dbxref=GeneID:3191792;gbkey=Gene;gene=lpnA;locus_tag=FTT_0901
NC_006570.2	RefSeq	CDS	909954	910403	.	+	0	ID=cds814;Name=YP_169898.1;Parent=gene917;Note=Paralog to conserved hypothetical lipoprotein lpnB.;Dbxref=UniProtKB%2FTrEMBL:Q5NGE4,Genbank:YP_169898.1,GeneID:3191792;gbkey=CDS;product=lipoprotein;protein_id=YP_169898.1;transl_table=11
NC_006570.2	RefSeq	gene	910562	911041	.	+	.	ID=gene918;Name=FTT_0902;Dbxref=GeneID:3191696;gbkey=Gene;locus_tag=FTT_0902
NC_006570.2	RefSeq	CDS	910562	911041	.	+	0	ID=cds815;Name=YP_169899.1;Parent=gene918;Note=paralog of FTT0903 ORF ftt0902;Dbxref=UniProtKB%2FTrEMBL:Q5NGE3,Genbank:YP_169899.1,GeneID:3191696;gbkey=CDS;product=hypothetical protein;protein_id=YP_169899.1;transl_table=11
NC_006570.2	RefSeq	gene	911141	911644	.	+	.	ID=gene919;Name=FTT_0903;Dbxref=GeneID:3191693;gbkey=Gene;locus_tag=FTT_0903
NC_006570.2	RefSeq	CDS	911141	911644	.	+	0	ID=cds816;Name=YP_169900.1;Parent=gene919;Note=paralog of FTT0902 ORF ftt0903;Dbxref=UniProtKB%2FTrEMBL:Q5NGE2,Genbank:YP_169900.1,GeneID:3191693;gbkey=CDS;product=hypothetical protein;protein_id=YP_169900.1;transl_table=11
NC_006570.2	RefSeq	gene	911677	912144	.	+	.	ID=gene920;Name=lpnB;Dbxref=GeneID:3190834;gbkey=Gene;gene=lpnB;locus_tag=FTT_0904
NC_006570.2	RefSeq	CDS	911677	912144	.	+	0	ID=cds817;Name=YP_169901.1;Parent=gene920;Note=Similar to P18149 17 kDa major membrane protein precursor from Francisella tularensis ssp. holarctica strain LVS %28149 aa%29. FASTA: opt: 274 Z-score: 359.1 E%28%29: 4.1e-12 Smith-Waterman score: 274%3B 32.468 identity %2833.5570ngapped%29 in 154 aa overlap. Paralog to conserved hypothetical lipoprotein lpnA.;Dbxref=UniProtKB%2FTrEMBL:Q5NGE1,Genbank:YP_169901.1,GeneID:3190834;gbkey=CDS;product=lipoprotein;protein_id=YP_169901.1;transl_table=11
NC_006570.2	RefSeq	gene	912217	913659	.	+	.	ID=gene921;Name=FTT_0905;Dbxref=GeneID:3191692;gbkey=Gene;locus_tag=FTT_0905
NC_006570.2	RefSeq	CDS	912217	913659	.	+	0	ID=cds818;Name=YP_169902.1;Parent=gene921;Note=Similar to Q8KQ19 PilO from Pseudomonas aeruginosa %28461 aa%29. FASTA: opt: 283 Z-score: 329.7 E%28%29: 1.6e-10 Smith-Waterman score: 283%3B 25.284 identity in 352 aa overlap. PilO is required for glycosylation of Pseudomonas aeruginosa pilin. ORF ftt0905;Dbxref=InterPro:IPR007016,UniProtKB%2FTrEMBL:Q5NGE0,Genbank:YP_169902.1,GeneID:3191692;gbkey=CDS;product=Type IV pili glycosylation protein;protein_id=YP_169902.1;transl_table=11
NC_006570.2	RefSeq	gene	913713	916007	.	-	.	ID=gene922;Name=topA;Dbxref=GeneID:3190793;gbkey=Gene;gene=topA;locus_tag=FTT_0906c
NC_006570.2	RefSeq	CDS	913713	916007	.	-	0	ID=cds819;Name=YP_169903.1;Parent=gene922;Note=catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining%3B maintains net negative superhelicity;Dbxref=GOA:Q5NGD9,InterPro:IPR013826,UniProtKB%2FTrEMBL:Q5NGD9,Genbank:YP_169903.1,GeneID:3190793;gbkey=CDS;product=DNA topoisomerase I;protein_id=YP_169903.1;transl_table=11
NC_006570.2	RefSeq	gene	916206	916847	.	+	.	ID=gene923;Name=parA;Dbxref=GeneID:3191395;gbkey=Gene;gene=parA;locus_tag=FTT_0907
NC_006570.2	RefSeq	CDS	916206	916847	.	+	0	ID=cds820;Name=YP_169904.1;Parent=gene923;Note=Similar to Q9F260 Partition protein from Actinobacillus actinomycetemcomitans %28213 aa%29. FASTA: opt: 286 Z-score: 339.2 E%28%29: 4.8e-11 mith-Waterman score: 286%3B 29.245 identity in 212 aa overlap;Dbxref=GOA:Q5NGD8,InterPro:IPR002586,UniProtKB%2FTrEMBL:Q5NGD8,Genbank:YP_169904.1,GeneID:3191395;gbkey=CDS;product=chmomosome partition protein A;protein_id=YP_169904.1;transl_table=11
NC_006570.2	RefSeq	gene	916840	917754	.	+	.	ID=gene924;Name=parB;Dbxref=GeneID:3191409;gbkey=Gene;gene=parB;locus_tag=FTT_0908
NC_006570.2	RefSeq	CDS	916840	917754	.	+	0	ID=cds821;Name=YP_169905.1;Parent=gene924;Note=Similar to Q9CJA4 Chromosome partitioning protein from Lactococcus lactis %28261 aa%29. FASTA: opt: 399 Z-score: 442.0 E%28%29: 9e-17 Smith-Waterman score: 399%3B 33.333 identity in 264 aa overlap;Dbxref=GOA:Q5NGD7,InterPro:IPR013741,UniProtKB%2FTrEMBL:Q5NGD7,Genbank:YP_169905.1,GeneID:3191409;gbkey=CDS;product=chromosome partition protein B;protein_id=YP_169905.1;transl_table=11
NC_006570.2	RefSeq	gene	917768	918475	.	+	.	ID=gene925;Name=FTT_0909;Dbxref=GeneID:3191690;gbkey=Gene;locus_tag=FTT_0909
NC_006570.2	RefSeq	CDS	917768	918475	.	+	0	ID=cds822;Name=YP_169906.1;Parent=gene925;Note=Similar to Q88LT5 Glutamine amidotransferase%2C class I from Pseudomonas putida %28244 aa%29. FASTA: opt: 589 Z-score: 771.5 bits: 150.1 E%28%29: 4.4e-35 Smith-Waterman score: 589%3B 36.325identity in 234 aa overlap. ORF ftt0909;Dbxref=GOA:Q5NGD6,InterPro:IPR017926,UniProtKB%2FTrEMBL:Q5NGD6,Genbank:YP_169906.1,GeneID:3191690;gbkey=CDS;product=glutamine amidotransferase;protein_id=YP_169906.1;transl_table=11
NC_006570.2	RefSeq	gene	918478	919359	.	+	.	ID=gene926;Name=FTT_0910;Dbxref=GeneID:3191688;gbkey=Gene;locus_tag=FTT_0910
NC_006570.2	RefSeq	CDS	918478	919359	.	+	0	ID=cds823;Name=YP_169907.1;Parent=gene926;Note=Weakly similar to Q8GNM7 Lysophospholipase A from Legionella pneumophila %28309 aa%29. FASTA: 86 opt: 302 Z-score: 378.8 bits: 78.1 E%28%29: 3.3e-13 Smith-Waterman score: 360%3B 29.795 identity in 292 aa overlap. ORF ftt0910;Dbxref=GOA:Q5NGD5,InterPro:IPR001087,UniProtKB%2FTrEMBL:Q5NGD5,Genbank:YP_169907.1,GeneID:3191688;gbkey=CDS;product=hypothetical protein;protein_id=YP_169907.1;transl_table=11
NC_006570.2	RefSeq	gene	919356	919946	.	+	.	ID=gene927;Name=FTT_0911;Dbxref=GeneID:3191687;gbkey=Gene;locus_tag=FTT_0911
NC_006570.2	RefSeq	CDS	919356	919946	.	+	0	ID=cds824;Name=YP_169908.1;Parent=gene927;Note=Similar with Q87NK1 Hypothetical protein from Vibrio parahaemolyticus %28195 aa%29 fasta scores%3B opt: 523 Z-score: 649.0 E%28%29: 2.7e-28 Smith-Waterman score: 523%3B 42.857 identity in 189 aa overlap ORF ftt0911;Dbxref=GOA:Q5NGD4,InterPro:IPR006674,UniProtKB%2FTrEMBL:Q5NGD4,Genbank:YP_169908.1,GeneID:3191687;gbkey=CDS;product=hypothetical protein;protein_id=YP_169908.1;transl_table=11
NC_006570.2	RefSeq	gene	920006	920626	.	-	.	ID=gene928;Name=rrmJ;Dbxref=GeneID:3191489;gbkey=Gene;gene=rrmJ;locus_tag=FTT_0912c
NC_006570.2	RefSeq	CDS	920006	920626	.	-	0	ID=cds825;Name=YP_169909.1;Parent=gene928;Note=Similar to Q8EHM3 Ribosomal RNA large subunit methyltransferase J from Shewanella oneidensis %28209 aa%29. FASTA: opt: 730 Z-score: 844.0 E%28%29: 3.7e-39 Smith-Waterman score: 730%3B 53.202identity in 203 aa overlap;Dbxref=GOA:Q5NGD3,InterPro:IPR016448,UniProtKB%2FSwiss-Prot:Q5NGD3,Genbank:YP_169909.1,GeneID:3191489;gbkey=CDS;product=ribosomal large subunit methyltransferase J;protein_id=YP_169909.1;transl_table=11
NC_006570.2	RefSeq	gene	920784	921251	.	+	.	ID=gene929;Name=FTT_0913;Dbxref=GeneID:3191683;gbkey=Gene;locus_tag=FTT_0913
NC_006570.2	RefSeq	CDS	920784	921251	.	+	0	ID=cds826;Name=YP_169910.1;Parent=gene929;Note=ORF ftt0913;Dbxref=UniProtKB%2FTrEMBL:Q5NGD2,Genbank:YP_169910.1,GeneID:3191683;gbkey=CDS;product=hypothetical protein;protein_id=YP_169910.1;transl_table=11
NC_006570.2	RefSeq	gene	921246	921731	.	-	.	ID=gene930;Name=lspA;Dbxref=GeneID:3190811;gbkey=Gene;gene=lspA;locus_tag=FTT_0914c
NC_006570.2	RefSeq	CDS	921246	921731	.	-	0	ID=cds827;Name=YP_169911.1;Parent=gene930;Note=lipoprotein signal peptidase%3B integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis;Dbxref=GOA:Q5NGD1,InterPro:IPR001872,UniProtKB%2FSwiss-Prot:Q5NGD1,Genbank:YP_169911.1,GeneID:3190811;gbkey=CDS;product=lipoprotein signal peptidase;protein_id=YP_169911.1;transl_table=11
NC_006570.2	RefSeq	gene	921718	924525	.	-	.	ID=gene931;Name=ileS;Dbxref=GeneID:3192543;gbkey=Gene;gene=ileS;locus_tag=FTT_0915c
NC_006570.2	RefSeq	CDS	921718	924525	.	-	0	ID=cds828;Name=YP_169912.1;Parent=gene931;Note=IleRS%3B catalyzes the formation of isoleucyl-tRNA%28Ile%29 from isoleucine and tRNA%28Ile%29%3B since isoleucine and other amino acids such as valine are similar%2C there are additional editing function in this enzyme%3B one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA%28Ile%29%3B there are two active sites%2C one for aminoacylation and one for editing%3B class-I aminoacyl-tRNA synthetase family type 1 subfamily%3B some organisms carry two different copies of this enzyme;Dbxref=GOA:Q5NGD0,InterPro:IPR018353,UniProtKB%2FSwiss-Prot:Q5NGD0,Genbank:YP_169912.1,GeneID:3192543;gbkey=CDS;product=isoleucyl-tRNA synthetase;protein_id=YP_169912.1;transl_table=11
NC_006570.2	RefSeq	gene	924618	925538	.	-	.	ID=gene932;Name=ribF;Dbxref=GeneID:3191623;gbkey=Gene;gene=ribF;locus_tag=FTT_0916c
NC_006570.2	RefSeq	CDS	924618	925538	.	-	0	ID=cds829;Name=YP_169913.1;Parent=gene932;Note=Similar to Q9CKF8 RibF from Pasteurella multocida %28311 aa%29. FASTA: opt: 845 Z-score: 994.4 E%28%29: 1.5e-47 Smith-Waterman score: 845%3B 44.481 identity in 308 aa overlap;Dbxref=GOA:Q5NGC9,InterPro:IPR015865,UniProtKB%2FTrEMBL:Q5NGC9,Genbank:YP_169913.1,GeneID:3191623;gbkey=CDS;product=riboflavin biosynthesis protein RibF;protein_id=YP_169913.1;transl_table=11
NC_006570.2	RefSeq	gene	925689	927503	.	+	.	ID=gene933;Name=maeA;Dbxref=GeneID:3192386;gbkey=Gene;gene=maeA;locus_tag=FTT_0917
NC_006570.2	RefSeq	CDS	925689	927503	.	+	0	ID=cds830;Name=YP_169914.1;Parent=gene933;Note=malic enzyme%3B oxaloacetate-decarboxylating%3B NAD-dependent%3B catalyzes the formation of pyruvate form malate;Dbxref=GOA:Q5NGC8,InterPro:IPR016040,UniProtKB%2FTrEMBL:Q5NGC8,Genbank:YP_169914.1,GeneID:3192386;gbkey=CDS;product=malate dehydrogenase;protein_id=YP_169914.1;transl_table=11
NC_006570.2	RefSeq	gene	927666	929339	.	+	.	ID=gene934;Name=FTT_0918;Dbxref=GeneID:3191684;gbkey=Gene;locus_tag=FTT_0918
NC_006570.2	RefSeq	CDS	927666	929339	.	+	0	ID=cds831;Name=YP_169915.1;Parent=gene934;Note=ORF ftt0918;Dbxref=InterPro:IPR018073,UniProtKB%2FTrEMBL:Q5NGC7,Genbank:YP_169915.1,GeneID:3191684;gbkey=CDS;product=hypothetical protein;protein_id=YP_169915.1;transl_table=11
NC_006570.2	RefSeq	gene	929356	930801	.	+	.	ID=gene935;Name=FTT_0919;Dbxref=GeneID:3191682;gbkey=Gene;locus_tag=FTT_0919
NC_006570.2	RefSeq	CDS	929356	930801	.	+	0	ID=cds832;Name=YP_169916.1;Parent=gene935;Note=ORF ftt0919;Dbxref=UniProtKB%2FTrEMBL:Q5NGC6,Genbank:YP_169916.1,GeneID:3191682;gbkey=CDS;product=hypothetical protein;protein_id=YP_169916.1;transl_table=11
NC_006570.2	RefSeq	repeat_region	930872	930883	.	+	.	ID=id132;Note=ISFtu1 12bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	930884	930899	.	+	.	ID=id133;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	930900	930915	.	+	.	ID=id134;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;gbkey=repeat_region
NC_006570.2	RefSeq	gene	930936	931720	.	+	.	ID=gene936;Name=isftu1;Dbxref=GeneID:3190914;gbkey=Gene;gene=isftu1;locus_tag=FTT_0920
NC_006570.2	RefSeq	CDS	930936	931262	.	+	0	ID=cds833;Name=YP_169917.1;Parent=gene936;Note=ISFtu1. Transposase%2C member of the IS630 Tc-1 mariner family. Identical to Q93EJ6  transposase from Francisella tularensis %28118 aa%29 from aa 144-261. Identical to Q93EJ7  transposase from Francisella tularensis %28126 aa%29 from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF%27s. ORF1 %28identical to Q93EJ7%29 contains a programmed ribosomal frameshifting motif%2C 5%27-AAAAAAAG-3%27 at aa position 109 which permits frameshifting to ORF2 %28identical to Q93EJ6%29 to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family%2C and also mariner elements%2C show that this transposase shares strongly conserved residues%2C including a fully conserved dipeptide%2CAsp-Glu %28DE%29%2C and a block consisting of a fully conserved Asp and highly conserved Glu%2C separated by 34 or 35 residues %28D35E%29. The conserved dipeptide is only present if ribosomal frameshifting occurs.;Dbxref=UniProtKB%2FTrEMBL:Q5NIH2,Genbank:YP_169917.1,GeneID:3190914;gbkey=CDS;product=transposase;protein_id=YP_169917.1;transl_table=11
NC_006570.2	RefSeq	CDS	931262	931720	.	+	0	ID=cds833;Name=YP_169917.1;Parent=gene936;Note=ISFtu1. Transposase%2C member of the IS630 Tc-1 mariner family. Identical to Q93EJ6  transposase from Francisella tularensis %28118 aa%29 from aa 144-261. Identical to Q93EJ7  transposase from Francisella tularensis %28126 aa%29 from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF%27s. ORF1 %28identical to Q93EJ7%29 contains a programmed ribosomal frameshifting motif%2C 5%27-AAAAAAAG-3%27 at aa position 109 which permits frameshifting to ORF2 %28identical to Q93EJ6%29 to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family%2C and also mariner elements%2C show that this transposase shares strongly conserved residues%2C including a fully conserved dipeptide%2CAsp-Glu %28DE%29%2C and a block consisting of a fully conserved Asp and highly conserved Glu%2C separated by 34 or 35 residues %28D35E%29. The conserved dipeptide is only present if ribosomal frameshifting occurs.;Dbxref=UniProtKB%2FTrEMBL:Q5NIH2,Genbank:YP_169917.1,GeneID:3190914;gbkey=CDS;product=transposase;protein_id=YP_169917.1;transl_table=11
NC_006570.2	RefSeq	repeat_region	931808	931819	.	+	.	ID=id135;Note=ISFtu1 12bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	gene	932217	932687	.	+	.	ID=gene937;Name=FTT_0921;Dbxref=GeneID:3191680;gbkey=Gene;locus_tag=FTT_0921;pseudo=true
NC_006570.2	RefSeq	region	932217	932687	.	+	.	ID=id136;Note=Truncated early to prevent overlap with tRNA-val. Possible point mutation resulting in lost stop codon and run-through of sequence ORF ftt0921 hypothetical membrane protein;Dbxref=GeneID:3191680;gbkey=misc_feature
NC_006570.2	RefSeq	gene	932688	932761	.	-	.	ID=gene938;Name=tRNA-Val %28GAC%29;Dbxref=GeneID:3190976;description=tRNA-Val %28GAC%29;gbkey=Gene;gene=tRNA-Val %28GAC%29;locus_tag=FTT_t17
NC_006570.2	RefSeq	tRNA	932688	932761	.	-	.	ID=rna17;Dbxref=GeneID:3190976;codons=49;gbkey=tRNA;product=tRNA-Val
NC_006570.2	RefSeq	exon	932688	932761	.	-	.	ID=id137;Parent=rna17;Dbxref=GeneID:3190976;codons=49;gbkey=tRNA;product=tRNA-Val
NC_006570.2	RefSeq	gene	932888	933442	.	+	.	ID=gene939;Name=FTT_0922;Dbxref=GeneID:3191679;gbkey=Gene;locus_tag=FTT_0922
NC_006570.2	RefSeq	CDS	932888	933442	.	+	0	ID=cds834;Name=YP_169918.1;Parent=gene939;Note=Similarity to Q98JM3 Probable fatty acid hydroxylase from Rhizobium loti %28164 aa%29. FASTA: opt: 305 Z-score: 383.8 E%28%29: 1.6e-13 Smith-Waterman score: 305%3B 31.902 identity in 163 aa overlap. ORF ftt0922;Dbxref=GOA:Q5NGC4,InterPro:IPR006694,UniProtKB%2FTrEMBL:Q5NGC4,Genbank:YP_169918.1,GeneID:3191679;gbkey=CDS;product=fatty acid hydroxylase;protein_id=YP_169918.1;transl_table=11
NC_006570.2	RefSeq	gene	933517	935670	.	+	.	ID=gene940;Name=rlmL;Dbxref=GeneID:3192468;gbkey=Gene;gene=rlmL;locus_tag=FTT_0923
NC_006570.2	RefSeq	CDS	933517	935670	.	+	0	ID=cds835;Name=YP_169919.1;Parent=gene940;Note=catalyzes the N2-methyl guanosine modification of the G2445 residue of 23S rRNA;Dbxref=GOA:Q5NGC3,InterPro:IPR017244,UniProtKB%2FSwiss-Prot:Q5NGC3,Genbank:YP_169919.1,GeneID:3192468;gbkey=CDS;product=23S rRNA m%282%29G2445 methyltransferase;protein_id=YP_169919.1;transl_table=11
NC_006570.2	RefSeq	gene	935772	936170	.	+	.	ID=gene941;Name=FTT_0924;Dbxref=GeneID:3192465;gbkey=Gene;locus_tag=FTT_0924
NC_006570.2	RefSeq	CDS	935772	936170	.	+	0	ID=cds836;Name=YP_169920.1;Parent=gene941;Note=ORF ftt0924;Dbxref=UniProtKB%2FTrEMBL:Q5NGC2,Genbank:YP_169920.1,GeneID:3192465;gbkey=CDS;product=hypothetical protein;protein_id=YP_169920.1;transl_table=11
NC_006570.2	RefSeq	gene	936175	937116	.	+	.	ID=gene942;Name=fmt;Dbxref=GeneID:3191926;gbkey=Gene;gene=fmt;locus_tag=FTT_0925
NC_006570.2	RefSeq	CDS	936175	937116	.	+	0	ID=cds837;Name=YP_169921.1;Parent=gene942;Note=Similarity to P44787 Methionyl-tRNA formyltransferase from Haemophilus ducreyi %28318 aa%29. FASTA: opt: 949 Z-score: 1086.2 E%28%29: 1.2e-52 Smith-Waterman score: 958%3B 48.387 identity in 310 aa overlap;Dbxref=GOA:Q5NGC1,InterPro:IPR015518,UniProtKB%2FSwiss-Prot:Q5NGC1,Genbank:YP_169921.1,GeneID:3191926;gbkey=CDS;product=methionyl-tRNA formyltransferase;protein_id=YP_169921.1;transl_table=11
NC_006570.2	RefSeq	gene	937120	938094	.	+	.	ID=gene943;Name=gshB;Dbxref=GeneID:3192106;gbkey=Gene;gene=gshB;locus_tag=FTT_0926
NC_006570.2	RefSeq	CDS	937120	938094	.	+	0	ID=cds838;Name=YP_169922.1;Parent=gene943;Note=catalyzes the second step in the glutathione biosynthesis pathway%2C where it synthesizes ATP %2B gamma-L-glutamyl-L-cysteine %2B glycine %3D ADP %2B phosphate %2B glutathione;Dbxref=GOA:Q5NGC0,InterPro:IPR013817,UniProtKB%2FTrEMBL:Q5NGC0,Genbank:YP_169922.1,GeneID:3192106;gbkey=CDS;product=glutathione synthetase;protein_id=YP_169922.1;transl_table=11
NC_006570.2	RefSeq	gene	938084	939379	.	+	.	ID=gene944;Name=hemL;Dbxref=GeneID:3192422;gbkey=Gene;gene=hemL;locus_tag=FTT_0927
NC_006570.2	RefSeq	CDS	938084	939379	.	+	0	ID=cds839;Name=YP_169923.1;Parent=gene944;Note=Converts %28S%29-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway;Dbxref=GOA:Q5NGB9,InterPro:IPR015421,UniProtKB%2FSwiss-Prot:Q5NGB9,Genbank:YP_169923.1,GeneID:3192422;gbkey=CDS;product=glutamate-1-semialdehyde aminotransferase;protein_id=YP_169923.1;transl_table=11
NC_006570.2	RefSeq	gene	939400	941067	.	-	.	ID=gene945;Name=FTT_0928c;Dbxref=GeneID:3192464;gbkey=Gene;locus_tag=FTT_0928c
NC_006570.2	RefSeq	CDS	939400	941067	.	-	0	ID=cds840;Name=YP_169924.1;Parent=gene945;Note=SImilar to Q8RD12 Beta-glucosidase-related glycosidases from Thermoanaerobacter tengcongensis %28591 aa%29. FASTA: opt: 1047 Z-score: 1141.5 E%28%29: 9.9e-56 Smith-Waterman score: 1062%3B 35.106 identity in 564 aa overlap. ORF ftt0928c;Dbxref=GOA:Q5NGB8,InterPro:IPR001764,UniProtKB%2FTrEMBL:Q5NGB8,Genbank:YP_169924.1,GeneID:3192464;gbkey=CDS;product=beta-glucosidase;protein_id=YP_169924.1;transl_table=11
NC_006570.2	RefSeq	gene	941131	941910	.	-	.	ID=gene946;Name=FTT_0929c;Dbxref=GeneID:3192463;gbkey=Gene;locus_tag=FTT_0929c;pseudo=true
NC_006570.2	RefSeq	gene	941932	942570	.	-	.	ID=gene947;Name=FTT_0930c;Dbxref=GeneID:3192462;gbkey=Gene;locus_tag=FTT_0930c;pseudo=true
NC_006570.2	RefSeq	gene	942809	944068	.	+	.	ID=gene948;Name=FTT_0931;Dbxref=GeneID:3192459;gbkey=Gene;locus_tag=FTT_0931
NC_006570.2	RefSeq	CDS	942809	944068	.	+	0	ID=cds841;Name=YP_169925.1;Parent=gene948;Note=Similar to Q89YS8 Glucose%2Fgalactose transporter from Bacteroides thetaiotaomicron %28415 aa%29. FASTA: opt: 1125 Z-score: 1176.3 bits: 226.6 E%28%29: 1.3e-57 Smith-Waterman score: 1125%3B 41.446 identity in 415 aa overlap ORF ftt0931;Dbxref=InterPro:IPR011701,UniProtKB%2FTrEMBL:Q5NGB7,Genbank:YP_169925.1,GeneID:3192459;gbkey=CDS;product=major facilitator transporter;protein_id=YP_169925.1;transl_table=11
NC_006570.2	RefSeq	gene	944103	944954	.	+	.	ID=gene949;Name=FTT_0932;Dbxref=GeneID:3192460;gbkey=Gene;locus_tag=FTT_0932
NC_006570.2	RefSeq	CDS	944103	944954	.	+	0	ID=cds842;Name=YP_169926.1;Parent=gene949;Note=Similar to Q8A1Q9 ROK family transcriptional repressor from Bacteroides thetaiotaomicron %28298 aa%29. FASTA: opt: 482 Z-score: 605.6 E%28%29: 7.7e-26 Smith-Waterman score: 482%3B 30.769 identity in 286 aa overlap ORF ftt0932;Dbxref=GOA:Q5NGB6,InterPro:IPR000600,UniProtKB%2FTrEMBL:Q5NGB6,Genbank:YP_169926.1,GeneID:3192460;gbkey=CDS;product=ROK family protein;protein_id=YP_169926.1;transl_table=11
NC_006570.2	RefSeq	gene	944977	945937	.	+	.	ID=gene950;Name=FTT_0933;Dbxref=GeneID:3192458;gbkey=Gene;locus_tag=FTT_0933;pseudo=true
NC_006570.2	RefSeq	gene	945880	946557	.	-	.	ID=gene951;Name=bioD;Dbxref=GeneID:3190963;gbkey=Gene;gene=bioD;locus_tag=FTT_0934c
NC_006570.2	RefSeq	CDS	945880	946557	.	-	0	ID=cds843;Name=YP_169927.1;Parent=gene951;Note=Similar to AAO90524 Dethiobiotin synthetase from Coxiella burnetii %28242 aa%29. FASTA: opt: 464 Z-score: 551.2 E%28%29: 7.5e-23 Smith-Waterman score: 464%3B 34.498 identity in 229 aa overlap;Dbxref=GOA:Q5NGB5,InterPro:IPR004472,UniProtKB%2FSwiss-Prot:Q5NGB5,Genbank:YP_169927.1,GeneID:3190963;gbkey=CDS;product=dethiobiotin synthetase;protein_id=YP_169927.1;transl_table=11
NC_006570.2	RefSeq	gene	946561	947298	.	-	.	ID=gene952;Name=bioC;Dbxref=GeneID:3190965;gbkey=Gene;gene=bioC;locus_tag=FTT_0935c
NC_006570.2	RefSeq	CDS	946561	947298	.	-	0	ID=cds844;Name=YP_169928.1;Parent=gene952;Note=Similar to AAO90525 Biotin synthesis protein BioC%2C  from Coxiella burnetii %28248 aa%29 FASTA: opt: 232 Z-score: 273.5 E%28%29: 2.2e-07 Smith-Waterman score: 232%3B 23.293 identity in 249 aa overlap;Dbxref=UniProtKB%2FTrEMBL:Q5NGB4,Genbank:YP_169928.1,GeneID:3190965;gbkey=CDS;product=biotin synthesis protein BioC;protein_id=YP_169928.1;transl_table=11
NC_006570.2	RefSeq	gene	947276	948403	.	-	.	ID=gene953;Name=bioF;Dbxref=GeneID:3190975;gbkey=Gene;gene=bioF;locus_tag=FTT_0936c
NC_006570.2	RefSeq	CDS	947276	948403	.	-	0	ID=cds845;Name=YP_169929.1;Parent=gene953;Note=Similar to AAO90527 8-amino-7-oxononanoate synthase %28384 aa%29 fasta scores%3B opt: 763 Z-score: 912.3 E%28%29: 5.8e-43 Smith-Waterman score: 763%3B 39.053identity in 338 aa overlap;Dbxref=GOA:Q5NGB3,InterPro:IPR015421,UniProtKB%2FTrEMBL:Q5NGB3,Genbank:YP_169929.1,GeneID:3190975;gbkey=CDS;product=8-amino-7-oxononanoate synthase;protein_id=YP_169929.1;transl_table=11
NC_006570.2	RefSeq	gene	948397	949338	.	-	.	ID=gene954;Name=bioB;Dbxref=GeneID:3190968;gbkey=Gene;gene=bioB;locus_tag=FTT_0937c
NC_006570.2	RefSeq	CDS	948397	949338	.	-	0	ID=cds846;Name=YP_169930.1;Parent=gene954;Note=Similar to AAO90528 Biotin synthase from Coxiella burnetii %28321 aa%29 FASTA: opt: 1220 Z-score: 1430.1 E%28%29: 8.3e-72 Smith-Waterman score: 1220%3B 60.396 identity in 303 aa overlap;Dbxref=GOA:Q5NGB2,InterPro:IPR013785,UniProtKB%2FTrEMBL:Q5NGB2,Genbank:YP_169930.1,GeneID:3190968;gbkey=CDS;product=biotin synthase;protein_id=YP_169930.1;transl_table=11
NC_006570.2	RefSeq	gene	949384	950715	.	+	.	ID=gene955;Name=bioA;Dbxref=GeneID:3192333;gbkey=Gene;gene=bioA;locus_tag=FTT_0938
NC_006570.2	RefSeq	CDS	949384	950715	.	+	0	ID=cds847;Name=YP_169931.1;Parent=gene955;Note=Similar to AAO90529 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase from Coxiella burnetii %28442 aa%29. FASTA: opt: 1486 Z-score: 1733.9 E%28%29: 9.9e-89 Smith-Waterman score: 1486%3B 50.588 identity in 425 aa overlap;Dbxref=GOA:Q5NGB1,InterPro:IPR015421,UniProtKB%2FTrEMBL:Q5NGB1,Genbank:YP_169931.1,GeneID:3192333;gbkey=CDS;product=adenosylmethionine-8-amino-7-oxononanoate aminotransferase;protein_id=YP_169931.1;transl_table=11
NC_006570.2	RefSeq	gene	950825	951769	.	-	.	ID=gene956;Name=add1;Dbxref=GeneID:3192404;gbkey=Gene;gene=add1;locus_tag=FTT_0939c
NC_006570.2	RefSeq	CDS	950825	951769	.	-	0	ID=cds848;Name=YP_169932.1;Parent=gene956;Note=catalyzes the formation of inosine from adenosine;Dbxref=GOA:Q5NGB0,InterPro:IPR006330,UniProtKB%2FTrEMBL:Q5NGB0,Genbank:YP_169932.1,GeneID:3192404;gbkey=CDS;product=adenosine deaminase;protein_id=YP_169932.1;transl_table=11
NC_006570.2	RefSeq	gene	951917	952417	.	-	.	ID=gene957;Name=FTT_0940c;Dbxref=GeneID:3192457;gbkey=Gene;locus_tag=FTT_0940c
NC_006570.2	RefSeq	CDS	951917	952417	.	-	0	ID=cds849;Name=YP_169933.1;Parent=gene957;Note=Similar to Q88CI3 Conserved hypothetical protein from Pseudomonas putida %28160 aa%29. FASTA: opt: 297 Z-score: 384.8 E%28%29: 1.4e-13 Smith-Waterman score: 297%3B 32.653 identity in 147 aa overlap ORF ftt0940c;Dbxref=UniProtKB%2FTrEMBL:Q5NGA9,Genbank:YP_169933.1,GeneID:3192457;gbkey=CDS;product=hypothetical protein;protein_id=YP_169933.1;transl_table=11
NC_006570.2	RefSeq	gene	952433	953353	.	-	.	ID=gene958;Name=FTT_0941c;Dbxref=GeneID:3192456;gbkey=Gene;locus_tag=FTT_0941c
NC_006570.2	RefSeq	CDS	952433	953353	.	-	0	ID=cds850;Name=YP_169934.1;Parent=gene958;Note=Similar to Q97VW1 Lipase %28lipP-1%29 from Sulfolobus solfataricus %28305 aa%29. FASTA: opt: 488 Z-score: 622.4 E%28%29: 8.9e-27 Smith-Waterman score: 488%3B 32.990 identity in 291 aa overlap. ORF ftt0941c;Dbxref=GOA:Q5NGA8,InterPro:IPR013094,UniProtKB%2FTrEMBL:Q5NGA8,Genbank:YP_169934.1,GeneID:3192456;gbkey=CDS;product=lipase%2Festerase;protein_id=YP_169934.1;transl_table=11
NC_006570.2	RefSeq	gene	953366	954631	.	-	.	ID=gene959;Name=folK;Dbxref=GeneID:3191528;gbkey=Gene;gene=folK;locus_tag=FTT_0942c
NC_006570.2	RefSeq	CDS	953366	954631	.	-	0	ID=cds851;Name=YP_169935.1;Parent=gene959;Note=Similar to Q821E2 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase%2Fdihydropteroate synthase from Chlamydophila caviae %28447 aa%29. FASTA: opt: 517 Z-score: 602.2 E%28%29: 1.2e-25 Smith-Waterman score: 604%3B 30.664 identity in 437 aa overlap;Dbxref=GOA:Q5NGA7,InterPro:IPR006390,UniProtKB%2FTrEMBL:Q5NGA7,Genbank:YP_169935.1,GeneID:3191528;gbkey=CDS;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase;protein_id=YP_169935.1;transl_table=11
NC_006570.2	RefSeq	gene	954633	954986	.	-	.	ID=gene960;Name=folB;Dbxref=GeneID:3191941;gbkey=Gene;gene=folB;locus_tag=FTT_0943c
NC_006570.2	RefSeq	CDS	954633	954986	.	-	0	ID=cds852;Name=YP_169936.1;Parent=gene960;Note=Similar to O84620 Probable dihydroneopterin aldolase %28124 aa%29 fasta scores%3B opt: 191 Z-score: 262.4 E%28%29: 9.2e-07 Smith-Waterman score: 191%3B 30.189identity in 106 aa overlap;Dbxref=GOA:Q5NGA6,InterPro:IPR006157,UniProtKB%2FTrEMBL:Q5NGA6,Genbank:YP_169936.1,GeneID:3191941;gbkey=CDS;product=dihydroneopterin aldolase;protein_id=YP_169936.1;transl_table=11
NC_006570.2	RefSeq	gene	955056	956438	.	+	.	ID=gene961;Name=FTT_0944;Dbxref=GeneID:3192455;gbkey=Gene;locus_tag=FTT_0944
NC_006570.2	RefSeq	CDS	955056	956438	.	+	0	ID=cds853;Name=YP_169937.1;Parent=gene961;Note=Similar to Q9CHK3 O-succinylbenzoic acid-CoA ligase from Lactococcus lactis %28420 aa%29. opt: 373 Z-score: 423.0 E%28%29: 1e-15 Smith-Waterman score: 434%3B 27.692 identity in 390 aa overlap ORF ftt0944;Dbxref=GOA:Q5NGA5,InterPro:IPR000873,UniProtKB%2FTrEMBL:Q5NGA5,Genbank:YP_169937.1,GeneID:3192455;gbkey=CDS;product=AMP-binding protein;protein_id=YP_169937.1;transl_table=11
NC_006570.2	RefSeq	gene	956431	958194	.	+	.	ID=gene962;Name=FTT_0945;Dbxref=GeneID:3192454;gbkey=Gene;locus_tag=FTT_0945
NC_006570.2	RefSeq	CDS	956431	958194	.	+	0	ID=cds854;Name=YP_169938.1;Parent=gene962;Note=Similar to Q8ESD8 Para-aminobenzoate synthase component II %28585 aa%29 fasta scores%3B opt: 1108 Z-score: 1235.5 E%28%29: 5.7e-61 Smith-Waterman score: 1108%3B 33.851 identity in 579 aa overlap. ORF ftt0945;Dbxref=GOA:Q5NGA4,InterPro:IPR015890,UniProtKB%2FTrEMBL:Q5NGA4,Genbank:YP_169938.1,GeneID:3192454;gbkey=CDS;product=chorismate binding family protein;protein_id=YP_169938.1;transl_table=11
NC_006570.2	RefSeq	gene	958196	958750	.	+	.	ID=gene963;Name=trpG1;Dbxref=GeneID:3190985;gbkey=Gene;gene=trpG1;locus_tag=FTT_0946
NC_006570.2	RefSeq	CDS	958196	958750	.	+	0	ID=cds855;Name=YP_169939.1;Parent=gene963;Note=Similarity to Q972A0  anthranilate synthase component from Sulfolobus tokodaii %28193 aa%29. FASTA: opt: 499 Z-score: 620.3 E%28%29: 1.1e-26 Smith-Waterman score: 499%3B 40.741 identity in 189 aa overlap. Closely related to pabA proteins as they possess a shared domain feature;Dbxref=GOA:Q5NGA3,InterPro:IPR017926,UniProtKB%2FTrEMBL:Q5NGA3,Genbank:YP_169939.1,GeneID:3190985;gbkey=CDS;product=anthranilate synthase component II;protein_id=YP_169939.1;transl_table=11
NC_006570.2	RefSeq	gene	958751	960008	.	-	.	ID=gene964;Name=FTT_0947c;Dbxref=GeneID:3192452;gbkey=Gene;locus_tag=FTT_0947c;pseudo=true
NC_006570.2	RefSeq	gene	959971	961035	.	-	.	ID=gene965;Name=FTT_0948c;Dbxref=GeneID:3192451;gbkey=Gene;locus_tag=FTT_0948c
NC_006570.2	RefSeq	CDS	959971	961035	.	-	0	ID=cds856;Name=YP_169940.1;Parent=gene965;Note=Similar to Q92QZ5  oxidoreductase protein from Rhizobium meliloti %28347 aa%29. FASTA: opt: 1125 Z-score: 1304.5 E%28%29: 8.2e-65 Smith-Waterman score: 1125%3B 50.140 identity in 357 aa overlap.  pseudogene: flanked by pseudogenes ORF ftt0948c;Dbxref=GOA:Q5NGA2,InterPro:IPR002345,UniProtKB%2FTrEMBL:Q5NGA2,Genbank:YP_169940.1,GeneID:3192451;gbkey=CDS;product=aldo%2Fketo reductase;protein_id=YP_169940.1;transl_table=11
NC_006570.2	RefSeq	gene	961128	962551	.	-	.	ID=gene966;Name=FTT_0949c;Dbxref=GeneID:3192450;gbkey=Gene;locus_tag=FTT_0949c;pseudo=true
NC_006570.2	RefSeq	gene	962691	963384	.	-	.	ID=gene967;Name=FTT_0950c;Dbxref=GeneID:3192449;gbkey=Gene;locus_tag=FTT_0950c;pseudo=true
NC_006570.2	RefSeq	gene	963398	964018	.	-	.	ID=gene968;Name=folE;Dbxref=GeneID:3191935;gbkey=Gene;gene=folE;locus_tag=FTT_0951c
NC_006570.2	RefSeq	CDS	963398	964018	.	-	0	ID=cds857;Name=YP_169941.1;Parent=gene968;Note=involved in the first step of tetrahydrofolate biosynthesis%3B catalyzes the formation of formate and 2-amino-4-hydroxy-6-%28erythro-1%2C2%2C3-trihydroxypropyl%29dihydropteridine triphosphate from GTP and water%3B forms a homopolymer;Dbxref=GOA:Q5NGA1,InterPro:IPR018234,UniProtKB%2FTrEMBL:Q5NGA1,Genbank:YP_169941.1,GeneID:3191935;gbkey=CDS;product=GTP cyclohydrolase I;protein_id=YP_169941.1;transl_table=11
NC_006570.2	RefSeq	gene	964145	965470	.	+	.	ID=gene969;Name=rhlE;Dbxref=GeneID:3191629;gbkey=Gene;gene=rhlE;locus_tag=FTT_0952
NC_006570.2	RefSeq	CDS	964145	965470	.	+	0	ID=cds858;Name=YP_169942.1;Parent=gene969;Note=Similar to Q8D6C6 Superfamily II DNA and RNA helicase from Vibrio vulnificus %28509 aa%29. FASTA: opt: 1533 Z-score: 1649.9 E%28%29: 4.8e-84 Smith-Waterman score: 1533%3B 56.036 identity in 439 aa overlap;Dbxref=GOA:Q5NGA0,InterPro:IPR014021,UniProtKB%2FTrEMBL:Q5NGA0,Genbank:YP_169942.1,GeneID:3191629;gbkey=CDS;product=ATP-dependent RNA helicase RhlE;protein_id=YP_169942.1;transl_table=11
NC_006570.2	RefSeq	gene	965467	967008	.	-	.	ID=gene970;Name=FTT_0953c;Dbxref=GeneID:3192447;gbkey=Gene;locus_tag=FTT_0953c
NC_006570.2	RefSeq	CDS	965467	967008	.	-	0	ID=cds859;Name=YP_169943.1;Parent=gene970;Note=Similar to Q9KTB5 Proton%2Fpeptide symporter family protein from Vibrio cholerae %28514 aa%29. FASTA: opt: 1329 Z-score: 1443.3 E%28%29: 1.5e-72 Smith-Waterman score: 1329%3B 42.629identity in 502 aa overlap. ORF ftt0953c;Dbxref=GOA:Q5NG99,InterPro:IPR005279,UniProtKB%2FTrEMBL:Q5NG99,Genbank:YP_169943.1,GeneID:3192447;gbkey=CDS;product=proton-dependent oligopeptide transport %28POT%29 family protein;protein_id=YP_169943.1;transl_table=11
NC_006570.2	RefSeq	gene	967146	967466	.	-	.	ID=gene971;Name=FTT_0954c;Dbxref=GeneID:3192448;gbkey=Gene;locus_tag=FTT_0954c
NC_006570.2	RefSeq	CDS	967146	967466	.	-	0	ID=cds860;Name=YP_169944.1;Parent=gene971;Note=Similar to O29392 Hypothetical protein AF0869 from Archaeoglobus fulgidus %28108 aa%29. FASTA: opt: 272 Z-score: 377.5 E%28%29: 3.9e-13 Smith-Waterman score: 272%3B 42.056 identity in 107 aa overlap ORF ftt0954c;Dbxref=InterPro:IPR002765,UniProtKB%2FSwiss-Prot:Q5NG98,Genbank:YP_169944.1,GeneID:3192448;gbkey=CDS;product=hypothetical protein;protein_id=YP_169944.1;transl_table=11
NC_006570.2	RefSeq	gene	967477	968838	.	-	.	ID=gene972;Name=gor;Dbxref=GeneID:3192553;gbkey=Gene;gene=gor;locus_tag=FTT_0955c
NC_006570.2	RefSeq	CDS	967477	968838	.	-	0	ID=cds861;Name=YP_169945.1;Parent=gene972;Note=catalyzes the reduction of 2 glutathione to glutathione disulfide%3B maintains high levels of reduced glutathione in the cytosol%3B involved in redox regulation and oxidative defense;Dbxref=GOA:Q5NG97,InterPro:IPR013027,UniProtKB%2FTrEMBL:Q5NG97,Genbank:YP_169945.1,GeneID:3192553;gbkey=CDS;product=glutathione reductase;protein_id=YP_169945.1;transl_table=11
NC_006570.2	RefSeq	gene	968876	969595	.	-	.	ID=gene973;Name=FTT_0956c;Dbxref=GeneID:3192446;gbkey=Gene;locus_tag=FTT_0956c
NC_006570.2	RefSeq	CDS	968876	969595	.	-	0	ID=cds862;Name=YP_169946.1;Parent=gene973;Note=Similar to AAO50751 %28Q86L42%29 Hypothetical protein from Dictyostelium discoideum %28239 aa%29. FASTA: opt: 229 Z-score: 273.3 E%28%29: 2.3e-07 Smith-Waterman score: 253%3B 29.437 identity in 231 aa overlap ORF ftt0956c;Dbxref=GOA:Q5NG96,UniProtKB%2FTrEMBL:Q5NG96,Genbank:YP_169946.1,GeneID:3192446;gbkey=CDS;product=hypothetical protein;protein_id=YP_169946.1;transl_table=11
NC_006570.2	RefSeq	gene	969595	970098	.	-	.	ID=gene974;Name=FTT_0957c;Dbxref=GeneID:3192445;gbkey=Gene;locus_tag=FTT_0957c
NC_006570.2	RefSeq	CDS	969595	970098	.	-	0	ID=cds863;Name=YP_169947.1;Parent=gene974;Note=Similar to Q83YE2 Shy8 from Streptomyces hygroscopicus %28163 aa%29. FASTA: opt: 343 Z-score: 413.4 bits: 82.8 E%28%29: 3.9e-15 Smith-Waterman score: 343%3B 36.420 identity in 162 aa overlap. ORF ftt0957c;Dbxref=UniProtKB%2FTrEMBL:Q5NG95,Genbank:YP_169947.1,GeneID:3192445;gbkey=CDS;product=hypothetical protein;protein_id=YP_169947.1;transl_table=11
NC_006570.2	RefSeq	gene	970101	970808	.	-	.	ID=gene975;Name=FTT_0958c;Dbxref=GeneID:3192443;gbkey=Gene;locus_tag=FTT_0958c
NC_006570.2	RefSeq	CDS	970101	970808	.	-	0	ID=cds864;Name=YP_169948.1;Parent=gene975;Note=Similar to Q9HWL9 Probable short-chain dehydrogenase from Pseudomonas aeruginosa %28238 aa%29. FASTA: opt: 848 Z-score: 1032.8 E%28%29: 1.1e-49 Smith-Waterman score: 848%3B 55.932 identity in 236 aa overlap ORF ftt0958c;Dbxref=GOA:Q5NG94,InterPro:IPR016040,UniProtKB%2FTrEMBL:Q5NG94,Genbank:YP_169948.1,GeneID:3192443;gbkey=CDS;product=short chain dehydrogenase;protein_id=YP_169948.1;transl_table=11
NC_006570.2	RefSeq	gene	970829	971617	.	-	.	ID=gene976;Name=xthA;Dbxref=GeneID:3192119;gbkey=Gene;gene=xthA;locus_tag=FTT_0959c
NC_006570.2	RefSeq	CDS	970829	971617	.	-	0	ID=cds865;Name=YP_169949.1;Parent=gene976;Note=Similar to Q83EM1 Exodeoxyribonuclease III from Coxiella burnetii %28259 aa%29. FASTA: opt: 991 Z-score: 1173.5 E%28%29: 1.6e-57 Smith-Waterman score: 991%3B 54.789 identity in 261 aa overlap;Dbxref=GOA:Q5NG93,InterPro:IPR005135,UniProtKB%2FTrEMBL:Q5NG93,Genbank:YP_169949.1,GeneID:3192119;gbkey=CDS;product=exodeoxyribonuclease III;protein_id=YP_169949.1;transl_table=11
NC_006570.2	RefSeq	gene	971901	972884	.	+	.	ID=gene977;Name=FTT_0960;Dbxref=GeneID:3192444;gbkey=Gene;locus_tag=FTT_0960
NC_006570.2	RefSeq	CDS	971901	972884	.	+	0	ID=cds866;Name=YP_169950.1;Parent=gene977;Note=Simiar to Q8EAC2 Conserved hypothetical protein Shewanella oneidensis %28371 aa%29. FASTA: opt: 607 Z-score: 717.9 E%28%29: 3.9e-32 Smith-Waterman score: 607%3B 32.622 identity in 328 aa overlap ORF ftt0960;Dbxref=GOA:Q5NG92,InterPro:IPR007036,UniProtKB%2FTrEMBL:Q5NG92,Genbank:YP_169950.1,GeneID:3192444;gbkey=CDS;product=hypothetical protein;protein_id=YP_169950.1;transl_table=11
NC_006570.2	RefSeq	gene	972892	973482	.	+	.	ID=gene978;Name=mdaB;Dbxref=GeneID:3191872;gbkey=Gene;gene=mdaB;locus_tag=FTT_0961
NC_006570.2	RefSeq	CDS	972892	973482	.	+	0	ID=cds867;Name=YP_169951.1;Parent=gene978;Note=Similar to P40717 Modulator of drug activity B from Escherichia coli %28193 aa%29. FASTA: opt: 900 Z-score: 1129.6 E%28%29: 4.5e-55 Smith-Waterman score: 900%3B 63.542 identity in 192 aa overlap.;Dbxref=GOA:Q5NG91,InterPro:IPR003680,UniProtKB%2FTrEMBL:Q5NG91,Genbank:YP_169951.1,GeneID:3191872;gbkey=CDS;product=modulator of drug activity B;protein_id=YP_169951.1;transl_table=11
NC_006570.2	RefSeq	gene	973598	974260	.	+	.	ID=gene979;Name=FTT_0962;Dbxref=GeneID:3192441;gbkey=Gene;locus_tag=FTT_0962
NC_006570.2	RefSeq	CDS	973598	974260	.	+	0	ID=cds868;Name=YP_169952.1;Parent=gene979;Note=Similar to Q87Z85 ThiJ%2FPfpI family protein from Pseudomonas syringae %28225 aa%29. FASTA: opt: 570 Z-score: 665.3 E%28%29: 3.3e-29 Smith-Waterman score: 570%3B 38.991 identity in 218 aa overlap ORF ftt0962;Dbxref=GOA:Q5NG90,InterPro:IPR002818,UniProtKB%2FTrEMBL:Q5NG90,Genbank:YP_169952.1,GeneID:3192441;gbkey=CDS;product=ThiJ%2FPfpI family protein;protein_id=YP_169952.1;transl_table=11
NC_006570.2	RefSeq	gene	974330	975442	.	-	.	ID=gene980;Name=aroG;Dbxref=GeneID:3190950;gbkey=Gene;gene=aroG;locus_tag=FTT_0963c
NC_006570.2	RefSeq	CDS	974330	975442	.	-	0	ID=cds869;Name=YP_169953.1;Parent=gene980;Note=catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate%2C phenylalanine sensitive;Dbxref=GOA:Q5NG89,InterPro:IPR013785,UniProtKB%2FTrEMBL:Q5NG89,Genbank:YP_169953.1,GeneID:3190950;gbkey=CDS;product=phospho-2-dehydro-3-deoxyheptonate aldolase;protein_id=YP_169953.1;transl_table=11
NC_006570.2	RefSeq	gene	975474	976850	.	-	.	ID=gene981;Name=ffh;Dbxref=GeneID:3191883;gbkey=Gene;gene=ffh;locus_tag=FTT_0964c
NC_006570.2	RefSeq	CDS	975474	976850	.	-	0	ID=cds870;Name=YP_169954.1;Parent=gene981;Note=Similar to Q9CLN6 Ffh from Pasteurella multocida %28458 aa%29. FASTA: opt: 1851 Z-score: 1789.9 E%28%29: 7.5e-92 Smith-Waterman score: 1851%3B 61.790 identity in 458 aa overlap;Dbxref=GOA:Q5NG88,InterPro:IPR013822,UniProtKB%2FTrEMBL:Q5NG88,Genbank:YP_169954.1,GeneID:3191883;gbkey=CDS;product=signal recognition particle protein%2C Ffh;protein_id=YP_169954.1;transl_table=11
NC_006570.2	RefSeq	gene	977194	978099	.	-	.	ID=gene982;Name=FTT_0965c;Dbxref=GeneID:3192440;gbkey=Gene;locus_tag=FTT_0965c
NC_006570.2	RefSeq	CDS	977194	978099	.	-	0	ID=cds871;Name=YP_169955.1;Parent=gene982;Note=Similar to Q928M9 Hypothetical protein lin2503 from Listeria innocua %28279 aa%29. FASTA: opt: 733 Z-score: 821.7 E%28%29: 6.4e-38 Smith-Waterman score: 733%3B 41.852 identity in 270 aa overlap. ORF ftt0965c;Dbxref=GOA:Q5NG87,InterPro:IPR002781,UniProtKB%2FTrEMBL:Q5NG87,Genbank:YP_169955.1,GeneID:3192440;gbkey=CDS;product=hypothetical protein;protein_id=YP_169955.1;transl_table=11
NC_006570.2	RefSeq	gene	978193	978411	.	+	.	ID=gene983;Name=infA;Dbxref=GeneID:3191552;gbkey=Gene;gene=infA;locus_tag=FTT_0966
NC_006570.2	RefSeq	CDS	978193	978411	.	+	0	ID=cds872;Name=YP_169956.1;Parent=gene983;Note=stimulates the activities of the other two initiation factors%2C IF-2 and IF-3;Dbxref=GOA:Q5NG86,InterPro:IPR012340,UniProtKB%2FSwiss-Prot:Q5NG86,Genbank:YP_169956.1,GeneID:3191552;gbkey=CDS;product=translation initiation factor IF-1;protein_id=YP_169956.1;transl_table=11
NC_006570.2	RefSeq	gene	978441	979368	.	-	.	ID=gene984;Name=FTT_0967c;Dbxref=GeneID:3192439;gbkey=Gene;locus_tag=FTT_0967c;pseudo=true
NC_006570.2	RefSeq	gene	979373	980788	.	-	.	ID=gene985;Name=FTT_0968c;Dbxref=GeneID:3192433;gbkey=Gene;locus_tag=FTT_0968c
NC_006570.2	RefSeq	CDS	979373	980788	.	-	0	ID=cds873;Name=YP_169957.1;Parent=gene985;Note=Similar to Q83BZ0 Amino acid antiporter from Coxiella burnetii %28474 aa%29. FASTA: 432 opt: 1275 Z-score: 1361.2 E%28%29: 6.3e-68 Smith-Waterman score: 1275%3B 40.171 identity in 468 aa overlap. ORF ftt0968c;Dbxref=GOA:Q5NG85,InterPro:IPR004841,UniProtKB%2FTrEMBL:Q5NG85,Genbank:YP_169957.1,GeneID:3192433;gbkey=CDS;product=amino acid antiporter;protein_id=YP_169957.1;transl_table=11
NC_006570.2	RefSeq	gene	980853	982226	.	-	.	ID=gene986;Name=trkA;Dbxref=GeneID:3191475;gbkey=Gene;gene=trkA;locus_tag=FTT_0969c
NC_006570.2	RefSeq	CDS	980853	982226	.	-	0	ID=cds874;Name=YP_169958.1;Parent=gene986;Note=involved in potassium uptake%3B found to be peripherally associated with the inner membrane in Escherichia coli%3B contains an NAD-binding domain;Dbxref=GOA:Q5NG84,InterPro:IPR016040,UniProtKB%2FTrEMBL:Q5NG84,Genbank:YP_169958.1,GeneID:3191475;gbkey=CDS;product=potassium transporter peripheral membrane protein;protein_id=YP_169958.1;transl_table=11
NC_006570.2	RefSeq	gene	982379	982789	.	+	.	ID=gene987;Name=FTT_0970;Dbxref=GeneID:3191852;gbkey=Gene;locus_tag=FTT_0970
NC_006570.2	RefSeq	CDS	982379	982789	.	+	0	ID=cds875;Name=YP_169959.1;Parent=gene987;Note=Similar to Q8PIG4 Hypothetical protein XAC2934 from Xanthomonas axonopodis %28152 aa%29. FASTA: opt: 281 Z-score: 360.3 E%28%29: 3.2e-12 Smith-Waterman score: 281%3B 33.588 identity in 131 aa overlap ORF ftt0970;Dbxref=GOA:Q5NG83,InterPro:IPR014290,UniProtKB%2FTrEMBL:Q5NG83,Genbank:YP_169959.1,GeneID:3191852;gbkey=CDS;product=hypothetical protein;protein_id=YP_169959.1;transl_table=11
NC_006570.2	RefSeq	gene	982796	984241	.	+	.	ID=gene988;Name=FTT_0971;Dbxref=GeneID:3190927;gbkey=Gene;locus_tag=FTT_0971
NC_006570.2	RefSeq	CDS	982796	984241	.	+	0	ID=cds876;Name=YP_169960.1;Parent=gene988;Note=with SufCD activates cysteine desulfurase SufS;Dbxref=GOA:Q5NG82,InterPro:IPR010231,UniProtKB%2FTrEMBL:Q5NG82,Genbank:YP_169960.1,GeneID:3190927;gbkey=CDS;product=cysteine desulfurase;protein_id=YP_169960.1;transl_table=11
NC_006570.2	RefSeq	gene	984280	985029	.	+	.	ID=gene989;Name=FTT_0972;Dbxref=GeneID:3190906;gbkey=Gene;locus_tag=FTT_0972
NC_006570.2	RefSeq	CDS	984280	985029	.	+	0	ID=cds877;Name=YP_169961.1;Parent=gene989;Note=Similar to Q8PIG2 ABC transporter ATP-binding protein from Xanthomonas axonopodis %28254 aa%29. FASTA: opt: 1080 Z-score: 1117.5 E%28%29: 2.1e-54 Smith-Waterman score: 1080%3B 65.041 identity in 246 aa overlap. ORF ftt0972;Dbxref=GOA:Q5NG81,InterPro:IPR017871,UniProtKB%2FTrEMBL:Q5NG81,Genbank:YP_169961.1,GeneID:3190906;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=YP_169961.1;transl_table=11
NC_006570.2	RefSeq	gene	985033	986187	.	+	.	ID=gene990;Name=FTT_0973;Dbxref=GeneID:3190904;gbkey=Gene;locus_tag=FTT_0973
NC_006570.2	RefSeq	CDS	985033	986187	.	+	0	ID=cds878;Name=YP_169962.1;Parent=gene990;Note=Similar to Q83BX9 Hypothetical protein CBU1358 Coxiella burnetii %28426 aa%29. FASTA: opt: 433 Z-score: 493.2 E%28%29: 1.3e-19 Smith-Waterman score: 460%3B 29.282 identity in 362 aa overlap ORF ftt0973;Dbxref=GOA:Q5NG80,InterPro:IPR000825,UniProtKB%2FTrEMBL:Q5NG80,Genbank:YP_169962.1,GeneID:3190904;gbkey=CDS;product=hypothetical protein;protein_id=YP_169962.1;transl_table=11
NC_006570.2	RefSeq	gene	986279	987061	.	+	.	ID=gene991;Name=FTT_0974;Dbxref=GeneID:3190903;gbkey=Gene;locus_tag=FTT_0974;pseudo=true
NC_006570.2	RefSeq	gene	987156	987845	.	+	.	ID=gene992;Name=FTT_0975;Dbxref=GeneID:3190902;gbkey=Gene;locus_tag=FTT_0975
NC_006570.2	RefSeq	CDS	987156	987845	.	+	0	ID=cds879;Name=YP_169963.1;Parent=gene992;Note=Weakly similar to Q83CZ8 Hypothetical protein Coxiella burnetii %28227 aa%29 76 opt: 235 Z-score: 276.0 bits: 58.3 E%28%29: 1.8e-07 Smith-Waterman score: 235%3B 25.000 identity in 236 aa overlap. ORF ftt0975;Dbxref=UniProtKB%2FTrEMBL:Q5NG79,Genbank:YP_169963.1,GeneID:3190902;gbkey=CDS;product=hypothetical protein;protein_id=YP_169963.1;transl_table=11
NC_006570.2	RefSeq	gene	987849	988175	.	+	.	ID=gene993;Name=trxA2;Dbxref=GeneID:3191003;gbkey=Gene;gene=trxA2;locus_tag=FTT_0976
NC_006570.2	RefSeq	CDS	987849	988175	.	+	0	ID=cds880;Name=YP_169964.1;Parent=gene993;Note=Similar to P37395 Thioredoxin from Cyanidium caldarium %28107 aa%29 fasta scores%3B opt: 333 Z-score: 452.0 E%28%29: 2.5e-17 Smith-Waterman score: 333%3B 45.098identity in 102 aa overlap;Dbxref=GOA:Q5NG78,InterPro:IPR017937,UniProtKB%2FTrEMBL:Q5NG78,Genbank:YP_169964.1,GeneID:3191003;gbkey=CDS;product=thioredoxin;protein_id=YP_169964.1;transl_table=11
NC_006570.2	RefSeq	gene	988574	988867	.	-	.	ID=gene994;Name=FTT_0977c;Dbxref=GeneID:3190901;gbkey=Gene;locus_tag=FTT_0977c
NC_006570.2	RefSeq	CDS	988574	988867	.	-	0	ID=cds881;Name=YP_169965.1;Parent=gene994;Note=Similar to Q89DD5 Bsl7504 protein from Bradyrhizobium japonicum %2899 aa%29. FASTA: opt: 209 Z-score: 292.0 E%28%29: 2e-08 Smith-Waterman score: 209%3B 38.462 identity in 91 aa overlap ORF ftt0977c;Dbxref=InterPro:IPR011991,UniProtKB%2FTrEMBL:Q5NG77,Genbank:YP_169965.1,GeneID:3190901;gbkey=CDS;product=hypothetical protein;protein_id=YP_169965.1;transl_table=11
NC_006570.2	RefSeq	gene	988871	989476	.	-	.	ID=gene995;Name=FTT_0978c;Dbxref=GeneID:3190898;gbkey=Gene;locus_tag=FTT_0978c
NC_006570.2	RefSeq	CDS	988871	989476	.	-	0	ID=cds882;Name=YP_169966.1;Parent=gene995;Note=ORF ftt0978c;Dbxref=InterPro:IPR018488,UniProtKB%2FTrEMBL:Q5NG76,Genbank:YP_169966.1,GeneID:3190898;gbkey=CDS;product=hypothetical protein;protein_id=YP_169966.1;transl_table=11
NC_006570.2	RefSeq	gene	989530	990897	.	-	.	ID=gene996;Name=FTT_0979c;Dbxref=GeneID:3190899;gbkey=Gene;locus_tag=FTT_0979c
NC_006570.2	RefSeq	CDS	989530	990897	.	-	0	ID=cds883;Name=YP_169967.1;Parent=gene996;Note=amino-acid permease%2C similarity to P39137 Amino-acid permease rocE from Bacillus subtilis %28467 aa%29. FASTA: opt: 1272 Z-score: 1431.9 E%28%29: 6.6e-72 Smith-Waterman score: 1272%3B 40.919 identity in 457 aa overlap. ORF ftt0979c;Dbxref=GOA:Q5NG75,InterPro:IPR004841,UniProtKB%2FTrEMBL:Q5NG75,Genbank:YP_169967.1,GeneID:3190899;gbkey=CDS;product=amino-acid permease;protein_id=YP_169967.1;transl_table=11
NC_006570.2	RefSeq	gene	991132	992373	.	+	.	ID=gene997;Name=FTT_0980;Dbxref=GeneID:3190897;gbkey=Gene;locus_tag=FTT_0980
NC_006570.2	RefSeq	CDS	991132	992373	.	+	0	ID=cds884;Name=YP_169968.1;Parent=gene997;Note=Similar to Q8UKI4 Aminotransferase%2C class II from Agrobacterium tumefaciens %28413 aa%29. FASTA: opt: 486 Z-score: 559.2 E%28%29: 2.7e-23 Smith-Waterman score: 554%3B 28.493 identity in 365 aa overlap ORF ftt0980;Dbxref=GOA:Q5NG74,InterPro:IPR015421,UniProtKB%2FTrEMBL:Q5NG74,Genbank:YP_169968.1,GeneID:3190897;gbkey=CDS;product=hypothetical protein;protein_id=YP_169968.1;transl_table=11
NC_006570.2	RefSeq	gene	992706	993836	.	+	.	ID=gene998;Name=FTT_0981;Dbxref=GeneID:3190896;gbkey=Gene;locus_tag=FTT_0981
NC_006570.2	RefSeq	CDS	992706	993836	.	+	0	ID=cds885;Name=YP_169969.1;Parent=gene998;Note=Weak homology to two-component sensory protein. ORF ftt0981;Dbxref=GOA:Q5NG73,InterPro:IPR001610,UniProtKB%2FTrEMBL:Q5NG73,Genbank:YP_169969.1,GeneID:3190896;gbkey=CDS;product=hypothetical protein;protein_id=YP_169969.1;transl_table=11
NC_006570.2	RefSeq	gene	993929	994072	.	+	.	ID=gene999;Name=FTT_0982;Dbxref=GeneID:3190895;gbkey=Gene;locus_tag=FTT_0982
NC_006570.2	RefSeq	CDS	993929	994072	.	+	0	ID=cds886;Name=YP_169970.1;Parent=gene999;Note=ORF ftt0982;Dbxref=UniProtKB%2FTrEMBL:Q5NG72,Genbank:YP_169970.1,GeneID:3190895;gbkey=CDS;product=hypothetical protein;protein_id=YP_169970.1;transl_table=11
NC_006570.2	RefSeq	gene	994056	994199	.	+	.	ID=gene1000;Name=FTT_0983;Dbxref=GeneID:3190894;gbkey=Gene;locus_tag=FTT_0983
NC_006570.2	RefSeq	CDS	994056	994199	.	+	0	ID=cds887;Name=YP_169971.1;Parent=gene1000;Note=ORF ftt0983;Dbxref=UniProtKB%2FTrEMBL:Q5NG71,Genbank:YP_169971.1,GeneID:3190894;gbkey=CDS;product=hypothetical protein;protein_id=YP_169971.1;transl_table=11
NC_006570.2	RefSeq	gene	994786	995196	.	-	.	ID=gene1001;Name=mutT;Dbxref=GeneID:3192063;gbkey=Gene;gene=mutT;locus_tag=FTT_0984c
NC_006570.2	RefSeq	CDS	994786	995196	.	-	0	ID=cds888;Name=YP_169972.1;Parent=gene1001;Note=Similar to Q87SF6 Mutator MutT protein from Vibrio parahaemolyticus %28132 aa%29. FASTA: opt: 268 Z-score: 340.9 E%28%29: 3.9e-11 Smith-Waterman score: 268%3B 29.545identity in 132 aa overlap.;Dbxref=GOA:Q5NG70,InterPro:IPR000086,UniProtKB%2FTrEMBL:Q5NG70,Genbank:YP_169972.1,GeneID:3192063;gbkey=CDS;product=Mutator protein;protein_id=YP_169972.1;transl_table=11
NC_006570.2	RefSeq	gene	995235	995819	.	+	.	ID=gene1002;Name=FTT_0985;Dbxref=GeneID:3190893;gbkey=Gene;locus_tag=FTT_0985
NC_006570.2	RefSeq	CDS	995235	995819	.	+	0	ID=cds889;Name=YP_169973.1;Parent=gene1002;Note=Similar to Q8EBZ9 Conserved hypothetical protein from Shewanella oneidensis %28187 aa%29. FASTA: opt: 386 Z-score: 477.0 E%28%29: 1e-18 Smith-Waterman score: 386%3B 36.022 identity in 186 aa overlap ORF ftt0985;Dbxref=InterPro:IPR003774,UniProtKB%2FSwiss-Prot:Q5NG69,Genbank:YP_169973.1,GeneID:3190893;gbkey=CDS;product=hypothetical protein;protein_id=YP_169973.1;transl_table=11
NC_006570.2	RefSeq	gene	995821	996231	.	+	.	ID=gene1003;Name=FTT_0986;Dbxref=GeneID:3190892;gbkey=Gene;locus_tag=FTT_0986
NC_006570.2	RefSeq	CDS	995821	996231	.	+	0	ID=cds890;Name=YP_169974.1;Parent=gene1003;Note=Similar to Q9L3I7  Holliday junction resolvase from Aeromonas hydrophila %28140 aa%29. FASTA: opt: 336 Z-score: 430.0 E%28%29: 4.7e-16 Smith-Waterman score: 336%3B 36.567 identity in 134 aa overlap  Holliday junction resolvase predicted in other proteins ORF ftt0986;Dbxref=GOA:Q5NG68,InterPro:IPR006641,UniProtKB%2FSwiss-Prot:Q5NG68,Genbank:YP_169974.1,GeneID:3190892;gbkey=CDS;product=hypothetical protein;protein_id=YP_169974.1;transl_table=11
NC_006570.2	RefSeq	gene	996324	996521	.	+	.	ID=gene1004;Name=FTT_0987;Dbxref=GeneID:3190891;gbkey=Gene;locus_tag=FTT_0987
NC_006570.2	RefSeq	CDS	996324	996521	.	+	0	ID=cds891;Name=YP_169975.1;Parent=gene1004;Note=ORF ftt0987;Dbxref=UniProtKB%2FTrEMBL:Q5NG67,Genbank:YP_169975.1,GeneID:3190891;gbkey=CDS;product=hypothetical protein;protein_id=YP_169975.1;transl_table=11
NC_006570.2	RefSeq	gene	996644	996832	.	+	.	ID=gene1005;Name=FTT_0988;Dbxref=GeneID:3190889;gbkey=Gene;locus_tag=FTT_0988
NC_006570.2	RefSeq	CDS	996644	996832	.	+	0	ID=cds892;Name=YP_169976.1;Parent=gene1005;Note=ORF ftt0988;Dbxref=UniProtKB%2FTrEMBL:Q5NG66,Genbank:YP_169976.1,GeneID:3190889;gbkey=CDS;product=hypothetical protein;protein_id=YP_169976.1;transl_table=11
NC_006570.2	RefSeq	gene	996926	998821	.	+	.	ID=gene1006;Name=FTT_0989;Dbxref=GeneID:3190890;gbkey=Gene;locus_tag=FTT_0989
NC_006570.2	RefSeq	CDS	996926	998821	.	+	0	ID=cds893;Name=YP_169977.1;Parent=gene1006;Note=Similar to Q9I271 Hypothetical protein PA2044 from Pseudomonas aeruginosa %28624 aa%29. FASTA: opt: 447 Z-score: 484.0 E%28%29: 4.2e-19 Smith-Waterman score: 447%3B 22.203 identity in 572 aa overlap. ORF ftt0989;Dbxref=UniProtKB%2FTrEMBL:Q5NG65,Genbank:YP_169977.1,GeneID:3190890;gbkey=CDS;product=hypothetical protein;protein_id=YP_169977.1;transl_table=11
NC_006570.2	RefSeq	gene	998929	1001370	.	+	.	ID=gene1007;Name=leuS;Dbxref=GeneID:3190983;gbkey=Gene;gene=leuS;locus_tag=FTT_0990
NC_006570.2	RefSeq	CDS	998929	1001370	.	+	0	ID=cds894;Name=YP_169978.1;Parent=gene1007;Note=leucine--tRNA ligase%3B LeuRS%3B class-I aminoacyl-tRNA synthetase%3B charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA%3B due to the large number of codons that tRNA%28Leu%29 recognizes%2C the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA%2C but instead recognition is dependent on a conserved discriminator base A37 and a long arm%3B an editing domain hydrolyzes misformed products%3B in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase;Dbxref=GOA:Q5NG64,InterPro:IPR015413,UniProtKB%2FSwiss-Prot:Q5NG64,Genbank:YP_169978.1,GeneID:3190983;gbkey=CDS;product=leucyl-tRNA synthetase;protein_id=YP_169978.1;transl_table=11
NC_006570.2	RefSeq	gene	1001378	1001953	.	+	.	ID=gene1008;Name=FTT_0991;Dbxref=GeneID:3190888;gbkey=Gene;locus_tag=FTT_0991
NC_006570.2	RefSeq	CDS	1001378	1001953	.	+	0	ID=cds895;Name=YP_169979.1;Parent=gene1008;Note=ORF ftt0991;Dbxref=UniProtKB%2FTrEMBL:Q5NG63,Genbank:YP_169979.1,GeneID:3190888;gbkey=CDS;product=lipoprotein;protein_id=YP_169979.1;transl_table=11
NC_006570.2	RefSeq	gene	1002014	1003204	.	+	.	ID=gene1009;Name=FTT_0992;Dbxref=GeneID:3190887;gbkey=Gene;locus_tag=FTT_0992
NC_006570.2	RefSeq	CDS	1002014	1003204	.	+	0	ID=cds896;Name=YP_169980.1;Parent=gene1009;Note=Similar to Q8A7A2  membrane protein from Bacteroides thetaiotaomicron %28391 aa%29. FASTA: opt: 908 Z-score: 1062.3 E%28%29: 2.6e-51 Smith-Waterman score: 908%3B 37.637 identity in 364 aa overlap. ORF ftt0992;Dbxref=GOA:Q5NG62,InterPro:IPR006685,UniProtKB%2FTrEMBL:Q5NG62,Genbank:YP_169980.1,GeneID:3190887;gbkey=CDS;product=hypothetical protein;protein_id=YP_169980.1;transl_table=11
NC_006570.2	RefSeq	gene	1003211	1003777	.	-	.	ID=gene1010;Name=dcd;Dbxref=GeneID:3191500;gbkey=Gene;gene=dcd;locus_tag=FTT_0993c
NC_006570.2	RefSeq	CDS	1003211	1003777	.	-	0	ID=cds897;Name=YP_169981.1;Parent=gene1010;Note=Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis;Dbxref=GOA:Q5NG61,InterPro:IPR011962,UniProtKB%2FSwiss-Prot:Q5NG61,Genbank:YP_169981.1,GeneID:3191500;gbkey=CDS;product=deoxycytidine triphosphate deaminase;protein_id=YP_169981.1;transl_table=11
NC_006570.2	RefSeq	gene	1003789	1004649	.	-	.	ID=gene1011;Name=FTT_0994c;Dbxref=GeneID:3190886;gbkey=Gene;locus_tag=FTT_0994c
NC_006570.2	RefSeq	CDS	1003789	1004649	.	-	0	ID=cds898;Name=YP_169982.1;Parent=gene1011;Note=Similar to Q8XWU1 Probable MRP protein ATP-binding from Ralstonia solanacearum. %28362 aa%29. FASTA: opt: 1008 Z-score: 1105.3 E%28%29: 1e-53 Smith-Waterman score: 1008%3B 52.688 identity in 279 aa overlap. ORF ftt0994c;Dbxref=UniProtKB%2FTrEMBL:Q5NG60,Genbank:YP_169982.1,GeneID:3190886;gbkey=CDS;product=MRP like protein;protein_id=YP_169982.1;transl_table=11
NC_006570.2	RefSeq	gene	1004723	1005955	.	+	.	ID=gene1012;Name=FTT_0995;Dbxref=GeneID:3190885;gbkey=Gene;locus_tag=FTT_0995
NC_006570.2	RefSeq	CDS	1004723	1005955	.	+	0	ID=cds899;Name=YP_169983.1;Parent=gene1012;Note=Similarity to Q8UDH1 MFS permease%5Bproline%2Fbetaine%5D from Agrobacterium tumefaciens %28443 aa%29. FASTA: opt: 727 Z-score: 824.0 E%28%29: 4.8e-38 Smith-Waterman score: 828%3B 35.507identity in 414 aa overlap ORF ftt0995;Dbxref=InterPro:IPR011701,UniProtKB%2FTrEMBL:Q5NG59,Genbank:YP_169983.1,GeneID:3190885;gbkey=CDS;product=major facilitator transporter;protein_id=YP_169983.1;transl_table=11
NC_006570.2	RefSeq	gene	1006010	1007433	.	+	.	ID=gene1013;Name=FTT_0996;Dbxref=GeneID:3192074;gbkey=Gene;locus_tag=FTT_0996;pseudo=true
NC_006570.2	RefSeq	gene	1007525	1008955	.	+	.	ID=gene1014;Name=ybhO;Dbxref=GeneID:3192157;gbkey=Gene;gene=ybhO;locus_tag=FTT_0997
NC_006570.2	RefSeq	CDS	1007525	1008955	.	+	0	ID=cds900;Name=YP_169984.1;Parent=gene1014;Note=Similar to P71040 Probable cardiolipin synthetase 2 from Bacillus subtilis %28482 aa%29. FASTA: opt: 835 Z-score: 944.7 E%28%29: 9.1e-45 Smith-Waterman score: 835%3B 32.525 identity in 495 aa overlap;Dbxref=GOA:Q5NG58,InterPro:IPR001736,UniProtKB%2FTrEMBL:Q5NG58,Genbank:YP_169984.1,GeneID:3192157;gbkey=CDS;product=cardiolipin synthetase;protein_id=YP_169984.1;transl_table=11
NC_006570.2	RefSeq	gene	1009121	1010110	.	+	.	ID=gene1015;Name=FTT_0998;Dbxref=GeneID:3192073;gbkey=Gene;locus_tag=FTT_0998
NC_006570.2	RefSeq	CDS	1009121	1010110	.	+	0	ID=cds901;Name=YP_169985.1;Parent=gene1015;Note=ORF ftt0998;Dbxref=UniProtKB%2FTrEMBL:Q5NG57,Genbank:YP_169985.1,GeneID:3192073;gbkey=CDS;product=hypothetical protein;protein_id=YP_169985.1;transl_table=11
NC_006570.2	RefSeq	gene	1010135	1010900	.	-	.	ID=gene1016;Name=FTT_0999c;Dbxref=GeneID:3192071;gbkey=Gene;locus_tag=FTT_0999c;pseudo=true
NC_006570.2	RefSeq	gene	1010878	1012104	.	-	.	ID=gene1017;Name=cobS;Dbxref=GeneID:3191886;gbkey=Gene;gene=cobS;locus_tag=FTT_1000c
NC_006570.2	RefSeq	CDS	1010878	1012104	.	-	0	ID=cds902;Name=YP_169986.1;Parent=gene1017;Note=Similar to Q8FUU8 Cobalamin synthesis protein%2FP47K family protein from Brucella suis %28400 aa%29. FASTA: opt: 1643 Z-score: 1956.7 E%28%29: 4.3e-101 Smith-Waterman score: 1643%3B 58.396 identity in 399 aa overlap.;Dbxref=GOA:Q5NG56,InterPro:IPR011629,UniProtKB%2FTrEMBL:Q5NG56,Genbank:YP_169986.1,GeneID:3191886;gbkey=CDS;product=cobalamin %28vitamin B12%29 synthesis protein%2FP47K family protein;protein_id=YP_169986.1;transl_table=11
NC_006570.2	RefSeq	gene	1012246	1012677	.	+	.	ID=gene1018;Name=FTT_1001;Dbxref=GeneID:3192069;gbkey=Gene;locus_tag=FTT_1001
NC_006570.2	RefSeq	CDS	1012246	1012677	.	+	0	ID=cds903;Name=YP_169987.1;Parent=gene1018;Note=Similar to Q8ZJ15  regulatory protein from Yersinia pestis %28169 aa%29. FASTA: opt: 313 Z-score: 406.8 E%28%29: 9.2e-15 Smith-Waterman score: 313%3B 36.429 identity in 140 aa overlap. ORF ftt1001;Dbxref=UniProtKB%2FTrEMBL:Q5NG55,Genbank:YP_169987.1,GeneID:3192069;gbkey=CDS;product=regulatory protein;protein_id=YP_169987.1;transl_table=11
NC_006570.2	RefSeq	gene	1012720	1015092	.	-	.	ID=gene1019;Name=pheT;Dbxref=GeneID:3191133;gbkey=Gene;gene=pheT;locus_tag=FTT_1002c
NC_006570.2	RefSeq	CDS	1012720	1015092	.	-	0	ID=cds904;Name=YP_169988.1;Parent=gene1019;Note=catalyzes a two-step reaction%2C first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B forms a tetramer of alpha%282%29beta%282%29%3B binds two magnesium ions per tetramer%3B type 2 subfamily;Dbxref=GOA:Q5NG54,InterPro:IPR012340,UniProtKB%2FSwiss-Prot:Q5NG54,Genbank:YP_169988.1,GeneID:3191133;gbkey=CDS;product=phenylalanyl-tRNA synthetase subunit beta;protein_id=YP_169988.1;transl_table=11
NC_006570.2	RefSeq	gene	1015113	1016126	.	-	.	ID=gene1020;Name=pheS;Dbxref=GeneID:3191372;gbkey=Gene;gene=pheS;locus_tag=FTT_1003c
NC_006570.2	RefSeq	CDS	1015113	1016126	.	-	0	ID=cds905;Name=YP_169989.1;Parent=gene1020;Note=catalyzes a two-step reaction%2C first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B forms a heterotetramer of alpha%282%29beta%282%29%3B binds two magnesium ions per tetramer%3B type 1 subfamily;Dbxref=GOA:Q5NG53,InterPro:IPR018157,UniProtKB%2FSwiss-Prot:Q5NG53,Genbank:YP_169989.1,GeneID:3191372;gbkey=CDS;product=phenylalanyl-tRNA synthetase subunit alpha;protein_id=YP_169989.1;transl_table=11
NC_006570.2	RefSeq	gene	1016212	1017105	.	-	.	ID=gene1021;Name=FTT_1004c;Dbxref=GeneID:3192070;gbkey=Gene;locus_tag=FTT_1004c
NC_006570.2	RefSeq	CDS	1016212	1017105	.	-	0	ID=cds906;Name=YP_169990.1;Parent=gene1021;Note=Similar to Q9RX03 Hypothetical protein DR0512 from Deinococcus radiodurans %28301 aa%29. Similar to opt: 577 Z-score: 644.6 E%28%29: 5.1e-28 Smith-Waterman score: 577%3B 33.094 identity in 278 aa overlap. ORF ftt1004c;Dbxref=GOA:Q5NG52,InterPro:IPR000620,UniProtKB%2FTrEMBL:Q5NG52,Genbank:YP_169990.1,GeneID:3192070;gbkey=CDS;product=hypothetical protein;protein_id=YP_169990.1;transl_table=11
NC_006570.2	RefSeq	gene	1017130	1018605	.	-	.	ID=gene1022;Name=yhiP;Dbxref=GeneID:3191273;gbkey=Gene;gene=yhiP;locus_tag=FTT_1005c
NC_006570.2	RefSeq	CDS	1017130	1018605	.	-	0	ID=cds907;Name=YP_169991.1;Parent=gene1022;Note=Similar to Q8X5Q8  transport protein from Escherichia coli %28489 aa%29. FASTA: opt: 1050 Z-score: 1137.7 E%28%29: 1.8e-55 Smith-Waterman score: 1050%3B 35.569 identity in 492 aa overlap.;Dbxref=GOA:Q5NG51,InterPro:IPR018456,UniProtKB%2FTrEMBL:Q5NG51,Genbank:YP_169991.1,GeneID:3191273;gbkey=CDS;product=proton-dependent oligopeptide transporter %28POT%29 family protein;protein_id=YP_169991.1;transl_table=11
NC_006570.2	RefSeq	gene	1018849	1020057	.	+	.	ID=gene1023;Name=FTT_1006;Dbxref=GeneID:3192068;gbkey=Gene;locus_tag=FTT_1006
NC_006570.2	RefSeq	CDS	1018849	1020057	.	+	0	ID=cds908;Name=YP_169992.1;Parent=gene1023;Note=ORF ftt1006;Dbxref=InterPro:IPR011701,UniProtKB%2FTrEMBL:Q5NG50,Genbank:YP_169992.1,GeneID:3192068;gbkey=CDS;product=hypothetical protein;protein_id=YP_169992.1;transl_table=11
NC_006570.2	RefSeq	gene	1020042	1020764	.	-	.	ID=gene1024;Name=FTT_1007c;Dbxref=GeneID:3192067;gbkey=Gene;locus_tag=FTT_1007c
NC_006570.2	RefSeq	CDS	1020042	1020764	.	-	0	ID=cds909;Name=YP_169993.1;Parent=gene1024;Note=ORF ftt1007c;Dbxref=GOA:Q5NG49,InterPro:IPR001969,UniProtKB%2FTrEMBL:Q5NG49,Genbank:YP_169993.1,GeneID:3192067;gbkey=CDS;product=hypothetical protein;protein_id=YP_169993.1;transl_table=11
NC_006570.2	RefSeq	gene	1020825	1020989	.	-	.	ID=gene1025;Name=FTT_1008c;Dbxref=GeneID:3192065;gbkey=Gene;locus_tag=FTT_1008c
NC_006570.2	RefSeq	CDS	1020825	1020989	.	-	0	ID=cds910;Name=YP_169994.1;Parent=gene1025;Note=ORF ftt1008c;Dbxref=UniProtKB%2FTrEMBL:Q5NG48,Genbank:YP_169994.1,GeneID:3192065;gbkey=CDS;product=hypothetical protein;protein_id=YP_169994.1;transl_table=11
NC_006570.2	RefSeq	gene	1021117	1021653	.	+	.	ID=gene1026;Name=FTT_1009;Dbxref=GeneID:3192064;gbkey=Gene;locus_tag=FTT_1009
NC_006570.2	RefSeq	CDS	1021117	1021653	.	+	0	ID=cds911;Name=YP_169995.1;Parent=gene1026;Note=ORF ftt1009;Dbxref=UniProtKB%2FTrEMBL:Q5NG47,Genbank:YP_169995.1,GeneID:3192064;gbkey=CDS;product=hypothetical protein;protein_id=YP_169995.1;transl_table=11
NC_006570.2	RefSeq	gene	1021668	1021871	.	+	.	ID=gene1027;Name=FTT_1010;Dbxref=GeneID:3192061;gbkey=Gene;locus_tag=FTT_1010
NC_006570.2	RefSeq	CDS	1021668	1021871	.	+	0	ID=cds912;Name=YP_169996.1;Parent=gene1027;Note=Similar to Q81BZ8 Transcriptional regulator%2CCro%2FCI family protein from Bacillus cereus %28strain ATCC 14579 %2F DSM 31%29 %2871 aa%29. FASTA: opt: 263 Z-score: 391.6 E%28%29: 6.4e-14 Smith-Waterman score: 263%3B 60.606 identity in 66 aa overlap. ORF ftt1010;Dbxref=GOA:Q5NG46,InterPro:IPR001387,UniProtKB%2FTrEMBL:Q5NG46,Genbank:YP_169996.1,GeneID:3192061;gbkey=CDS;product=helix-turn-helix family protein;protein_id=YP_169996.1;transl_table=11
NC_006570.2	RefSeq	gene	1021983	1022171	.	+	.	ID=gene1028;Name=FTT_1011;Dbxref=GeneID:3192062;gbkey=Gene;locus_tag=FTT_1011
NC_006570.2	RefSeq	CDS	1021983	1022171	.	+	0	ID=cds913;Name=YP_169997.1;Parent=gene1028;Note=ORF ftt1011;Dbxref=UniProtKB%2FTrEMBL:Q5NG45,Genbank:YP_169997.1,GeneID:3192062;gbkey=CDS;product=hypothetical protein;protein_id=YP_169997.1;transl_table=11
NC_006570.2	RefSeq	gene	1022350	1023116	.	+	.	ID=gene1029;Name=FTT_1012;Dbxref=GeneID:3192060;gbkey=Gene;locus_tag=FTT_1012;pseudo=true
NC_006570.2	RefSeq	gene	1023158	1024204	.	-	.	ID=gene1030;Name=ruvB;Dbxref=GeneID:3191291;gbkey=Gene;gene=ruvB;locus_tag=FTT_1013c
NC_006570.2	RefSeq	CDS	1023158	1024204	.	-	0	ID=cds914;Name=YP_169998.1;Parent=gene1030;Note=promotes strand exchange during homologous recombination%3B RuvAB complex promotes branch migration%3B RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences%3B forms hexameric rings around opposite DNA arms%3B requires ATP for branch migration and orientation of RuvAB complex determines direction of migration;Dbxref=GOA:Q5NG44,InterPro:IPR011991,UniProtKB%2FSwiss-Prot:Q5NG44,Genbank:YP_169998.1,GeneID:3191291;gbkey=CDS;product=Holliday junction DNA helicase RuvB;protein_id=YP_169998.1;transl_table=11
NC_006570.2	RefSeq	gene	1024268	1024993	.	-	.	ID=gene1031;Name=FTT_1014c;Dbxref=GeneID:3192059;gbkey=Gene;locus_tag=FTT_1014c
NC_006570.2	RefSeq	CDS	1024268	1024993	.	-	0	ID=cds915;Name=YP_169999.1;Parent=gene1031;Note=Similar to YWFD_BACSU %28P39640%29 Hypothetical oxidoreductase ywfD from Bacillus subtilis %28255 aa%29. FASTA: opt: 410 Z-score: 474.7 E%28%29: 1.5e-18 Smith-Waterman score: 471%3B 38.710 identity in 248 aa overlap. ORF ftt1014c;Dbxref=GOA:Q5NG43,InterPro:IPR016040,UniProtKB%2FTrEMBL:Q5NG43,Genbank:YP_169999.1,GeneID:3192059;gbkey=CDS;product=short chain dehydrogenase family protein;protein_id=YP_169999.1;transl_table=11
NC_006570.2	RefSeq	gene	1025111	1025701	.	+	.	ID=gene1032;Name=FTT_1015;Dbxref=GeneID:3192056;gbkey=Gene;locus_tag=FTT_1015
NC_006570.2	RefSeq	CDS	1025111	1025701	.	+	0	ID=cds916;Name=YP_170000.1;Parent=gene1032;Note=ORF ftt1015;Dbxref=InterPro:IPR000644,UniProtKB%2FTrEMBL:Q5NG42,Genbank:YP_170000.1,GeneID:3192056;gbkey=CDS;product=hypothetical protein;protein_id=YP_170000.1;transl_table=11
NC_006570.2	RefSeq	gene	1025711	1026340	.	-	.	ID=gene1033;Name=FTT_1016c;Dbxref=GeneID:3192058;gbkey=Gene;locus_tag=FTT_1016c
NC_006570.2	RefSeq	CDS	1025711	1026340	.	-	0	ID=cds917;Name=YP_170001.1;Parent=gene1033;Note=Similar to Q9JQY7  lipase %28GDSL lipase family protein%29 from Neisseria meningitidis %28213 aa%29. FASTA: opt: 358 Z-score: 439.3 E%28%29: 1.4e-16 Smith-Waterman score: 358%3B 32.203 identity in 177 aa overlap. ORF ftt1016c;Dbxref=GOA:Q5NG41,InterPro:IPR013831,UniProtKB%2FTrEMBL:Q5NG41,Genbank:YP_170001.1,GeneID:3192058;gbkey=CDS;product=GDSL-like lipase%2Facylhydrolase family protein;protein_id=YP_170001.1;transl_table=11
NC_006570.2	RefSeq	gene	1026362	1026697	.	-	.	ID=gene1034;Name=FTT_1017c;Dbxref=GeneID:3192055;gbkey=Gene;locus_tag=FTT_1017c
NC_006570.2	RefSeq	CDS	1026362	1026697	.	-	0	ID=cds918;Name=YP_170002.1;Parent=gene1034;Note=ORF ftt1017c;Dbxref=InterPro:IPR009288,UniProtKB%2FTrEMBL:Q5NG40,Genbank:YP_170002.1,GeneID:3192055;gbkey=CDS;product=hypothetical protein;protein_id=YP_170002.1;transl_table=11
NC_006570.2	RefSeq	gene	1026713	1028560	.	-	.	ID=gene1035;Name=dxs;Dbxref=GeneID:3191556;gbkey=Gene;gene=dxs;locus_tag=FTT_1018c
NC_006570.2	RefSeq	CDS	1026713	1028560	.	-	0	ID=cds919;Name=YP_170003.1;Parent=gene1035;Note=catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate;Dbxref=GOA:Q5NG39,InterPro:IPR015941,UniProtKB%2FSwiss-Prot:Q5NG39,Genbank:YP_170003.1,GeneID:3191556;gbkey=CDS;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=YP_170003.1;transl_table=11
NC_006570.2	RefSeq	gene	1028642	1030192	.	-	.	ID=gene1036;Name=guaA;Dbxref=GeneID:3191098;gbkey=Gene;gene=guaA;locus_tag=FTT_1019c
NC_006570.2	RefSeq	CDS	1028642	1030192	.	-	0	ID=cds920;Name=YP_170004.1;Parent=gene1036;Note=contains glutamine-hydrolyzing domain and glutamine amidotransferase%3B GMP-binding domain%3B functions to produce GMP from XMP in the IMP pathway;Dbxref=GOA:Q5NG38,InterPro:IPR018318,UniProtKB%2FSwiss-Prot:Q5NG38,Genbank:YP_170004.1,GeneID:3191098;gbkey=CDS;product=GMP synthase;protein_id=YP_170004.1;transl_table=11
NC_006570.2	RefSeq	gene	1030280	1031827	.	-	.	ID=gene1037;Name=FTT_1020c;Dbxref=GeneID:3192053;gbkey=Gene;locus_tag=FTT_1020c
NC_006570.2	RefSeq	CDS	1030280	1031827	.	-	0	ID=cds921;Name=YP_170005.1;Parent=gene1037;Note=Similar to Q83EA0 Amino acid permease family protein from Coxiella burnetii %28531 aa%29. FASTA: opt: 925 Z-score: 996.3 E%28%29: 1.3e-47 Smith-Waterman score: 947%3B 29.379 identity in 531 aa overlap. ORF ftt1020c;Dbxref=GOA:Q5NG37,InterPro:IPR004841,UniProtKB%2FTrEMBL:Q5NG37,Genbank:YP_170005.1,GeneID:3192053;gbkey=CDS;product=amino acid permease;protein_id=YP_170005.1;transl_table=11
NC_006570.2	RefSeq	gene	1031880	1032656	.	-	.	ID=gene1038;Name=truA;Dbxref=GeneID:3190996;gbkey=Gene;gene=truA;locus_tag=FTT_1021c
NC_006570.2	RefSeq	CDS	1031880	1032656	.	-	0	ID=cds922;Name=YP_170006.1;Parent=gene1038;Note=mediates pseudouridylation %28positions 38%2C 39%2C 40%29 at the tRNA anticodon region which contributes to the structural stability;Dbxref=GOA:Q5NG36,InterPro:IPR001406,UniProtKB%2FSwiss-Prot:Q5NG36,Genbank:YP_170006.1,GeneID:3190996;gbkey=CDS;product=tRNA pseudouridine synthase A;protein_id=YP_170006.1;transl_table=11
NC_006570.2	RefSeq	gene	1032659	1034491	.	-	.	ID=gene1039;Name=FTT_1022c;Dbxref=GeneID:3192052;gbkey=Gene;locus_tag=FTT_1022c
NC_006570.2	RefSeq	CDS	1032659	1034491	.	-	0	ID=cds923;Name=YP_170007.1;Parent=gene1039;Note=Similar to Y125_PYRHO %28O57865%29 Hypothetical protein PH0125 from Pyrococcus horikoshii %28257 aa%29 %28from 1-260%29. FASTA: opt: 520 Z-score: 632.1 E%28%29: 2.6e-27 Smith-Waterman score: 520%3B 35.600 identity in 250 aa overlap AND Q97VT8 Lipase %28lipP-2%29 from Sulfolobus solfataricus %28311 aa%29 %28from 300-610%29. FASTA: opt: 613 Z-score: 743.7 E%28%29: 1.6e-33 Smith-Waterman score: 613%3B 34.586 identity in 266 aa overlap Possible merged protein due to a missing stop codon between 2 CDSs%3F ORF ftt1022c;Dbxref=GOA:Q5NG35,InterPro:IPR013094,UniProtKB%2FTrEMBL:Q5NG35,Genbank:YP_170007.1,GeneID:3192052;gbkey=CDS;product=hypothetical protein;protein_id=YP_170007.1;transl_table=11
NC_006570.2	RefSeq	gene	1034504	1035097	.	-	.	ID=gene1040;Name=FTT_1023c;Dbxref=GeneID:3192050;gbkey=Gene;locus_tag=FTT_1023c
NC_006570.2	RefSeq	CDS	1034504	1035097	.	-	0	ID=cds924;Name=YP_170008.1;Parent=gene1040;Note=Similar to Q8EGL6 Fumarylacetoacetate hydrolase family protein from Shewanella oneidensis %28208 aa%29. FASTA: opt: 599 Z-score: 746.5 E%28%29: 1.1e-33 Smith-Waterman score: 599%3B 51.913 identity in 183 aa overlap. ORF ftt1023c;Dbxref=GOA:Q5NG34,InterPro:IPR011234,UniProtKB%2FTrEMBL:Q5NG34,Genbank:YP_170008.1,GeneID:3192050;gbkey=CDS;product=fumarylacetoacetate hydrolase family protein;protein_id=YP_170008.1;transl_table=11
NC_006570.2	RefSeq	gene	1035146	1035877	.	-	.	ID=gene1041;Name=yhbG;Dbxref=GeneID:3192168;gbkey=Gene;gene=yhbG;locus_tag=FTT_1024c
NC_006570.2	RefSeq	CDS	1035146	1035877	.	-	0	ID=cds925;Name=YP_170009.1;Parent=gene1041;Note=Similar to Q8ZB44 Probable ABC transporter ATP-binding protein from Yersinia pestis %28241 aa%29. FASTA: opt: 1091 Z-score: 1233.5 E%28%29: 8.2e-61 Smith-Waterman score: 1091%3B 65.690 identity in 239 aa overlap.;Dbxref=GOA:Q5NG33,InterPro:IPR017871,UniProtKB%2FTrEMBL:Q5NG33,Genbank:YP_170009.1,GeneID:3192168;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=YP_170009.1;transl_table=11
NC_006570.2	RefSeq	gene	1035951	1036784	.	-	.	ID=gene1042;Name=FTT_1025c;Dbxref=GeneID:3192048;gbkey=Gene;locus_tag=FTT_1025c
NC_006570.2	RefSeq	CDS	1035951	1036784	.	-	0	ID=cds926;Name=YP_170010.1;Parent=gene1042;Note=ORF ftt1025c;Dbxref=InterPro:IPR005653,UniProtKB%2FTrEMBL:Q5NG32,Genbank:YP_170010.1,GeneID:3192048;gbkey=CDS;product=hypothetical protein;protein_id=YP_170010.1;transl_table=11
NC_006570.2	RefSeq	gene	1036771	1037397	.	-	.	ID=gene1043;Name=FTT_1026c;Dbxref=GeneID:3192049;gbkey=Gene;locus_tag=FTT_1026c
NC_006570.2	RefSeq	CDS	1036771	1037397	.	-	0	ID=cds927;Name=YP_170011.1;Parent=gene1043;Note=ORF ftt1026c;Dbxref=InterPro:IPR010664,UniProtKB%2FTrEMBL:Q5NG31,Genbank:YP_170011.1,GeneID:3192049;gbkey=CDS;product=hypothetical protein;protein_id=YP_170011.1;transl_table=11
NC_006570.2	RefSeq	gene	1037405	1037953	.	-	.	ID=gene1044;Name=yrbI;Dbxref=GeneID:3192403;gbkey=Gene;gene=yrbI;locus_tag=FTT_1027c
NC_006570.2	RefSeq	CDS	1037405	1037953	.	-	0	ID=cds928;Name=YP_170012.1;Parent=gene1044;Note=Similar to AAP18518 Hypothetical protein yrbI from Escherichia coli %28188 aa%29. FASTA: initn: 454 init1: 247 opt: 453 Z-score: 558.6 bits: 110.0 E%28%29: 3.2e-23 Smith-Waterman score: 453%3B 50.000 identity in 152 aa overlap.;Dbxref=GOA:Q5NG30,InterPro:IPR010023,UniProtKB%2FTrEMBL:Q5NG30,Genbank:YP_170012.1,GeneID:3192403;gbkey=CDS;product=3-deoxy-D-manno-octulosonate 8-phosphate phosphatase;protein_id=YP_170012.1;transl_table=11
NC_006570.2	RefSeq	gene	1038044	1038565	.	-	.	ID=gene1045;Name=ppa;Dbxref=GeneID:3191284;gbkey=Gene;gene=ppa;locus_tag=FTT_1028c
NC_006570.2	RefSeq	CDS	1038044	1038565	.	-	0	ID=cds929;Name=YP_170013.1;Parent=gene1045;Note=Similar to IPYR_YERPE %28Q8ZB98%29 Inorganic pyrophosphatase from Yersinia pestis %28175 aa%29. FASTA: opt: 762 Z-score: 1001.4 E%28%29: 6.9e-48 Smith-Waterman score: 762%3B 62.209 identity in 172 aa overlap.;Dbxref=GOA:Q5NG29,InterPro:IPR008162,UniProtKB%2FTrEMBL:Q5NG29,Genbank:YP_170013.1,GeneID:3191284;gbkey=CDS;product=inorganic pyrophosphatase;protein_id=YP_170013.1;transl_table=11
NC_006570.2	RefSeq	gene	1038722	1040056	.	+	.	ID=gene1046;Name=dacD;Dbxref=GeneID:3191499;gbkey=Gene;gene=dacD;locus_tag=FTT_1029
NC_006570.2	RefSeq	CDS	1038722	1040056	.	+	0	ID=cds930;Name=YP_170014.1;Parent=gene1046;Note=Similar to Q87VW4 D-alanyl-D-alanine carboxypeptidase from Pseudomonas syringae %28pv. tomato%29 %28386 aa%29. FASTA: opt: 602 Z-score: 704.0 E%28%29: 2.5e-31 Smith-Waterman score: 794%3B 36.409 identity in 401 aa overlap.;Dbxref=GOA:Q5NG28,InterPro:IPR018044,UniProtKB%2FTrEMBL:Q5NG28,Genbank:YP_170014.1,GeneID:3191499;gbkey=CDS;product=D-alanyl-D-alanine carboxypeptidase;protein_id=YP_170014.1;transl_table=11
NC_006570.2	RefSeq	gene	1040089	1040373	.	+	.	ID=gene1047;Name=FTT_1030;Dbxref=GeneID:3192047;gbkey=Gene;locus_tag=FTT_1030
NC_006570.2	RefSeq	CDS	1040089	1040373	.	+	0	ID=cds931;Name=YP_170015.1;Parent=gene1047;Note=Similar to YE87_NITEU %28Q82UJ7%29 Hypothetical UPF0250 protein NE1487 from Nitrosomonas europaea %2887 aa%29. FASTA: opt: 235 Z-score: 328.5 E%28%29: 2.1e-10 Smith-Waterman score: 235%3B 36.471 identity in 85 aa overlap. ORF ftt1030;Dbxref=InterPro:IPR007454,UniProtKB%2FTrEMBL:Q5NG27,Genbank:YP_170015.1,GeneID:3192047;gbkey=CDS;product=hypothetical protein;protein_id=YP_170015.1;transl_table=11
NC_006570.2	RefSeq	gene	1040383	1041003	.	+	.	ID=gene1048;Name=lipB;Dbxref=GeneID:3190841;gbkey=Gene;gene=lipB;locus_tag=FTT_1031
NC_006570.2	RefSeq	CDS	1040383	1041003	.	+	0	ID=cds932;Name=YP_170016.1;Parent=gene1048;Note=lipoyl%2Foctanoyltransferase%3B catalyzes the transfer of the lipoyl%2Foctanoyl moiety of lipoyl%2Foctanoyl-ACP onto lipoate-dependent enzymes like pyruvate dehydrogenase and the glycine cleavage system H protein;Dbxref=GOA:Q5NG26,InterPro:IPR004143,UniProtKB%2FSwiss-Prot:Q5NG26,Genbank:YP_170016.1,GeneID:3190841;gbkey=CDS;product=lipoate-protein ligase B;protein_id=YP_170016.1;transl_table=11
NC_006570.2	RefSeq	gene	1041511	1042950	.	+	.	ID=gene1049;Name=FTT_1032;Dbxref=GeneID:3192046;gbkey=Gene;locus_tag=FTT_1032;pseudo=true
NC_006570.2	RefSeq	gene	1042953	1044962	.	+	.	ID=gene1050;Name=yihQ;Dbxref=GeneID:3191281;gbkey=Gene;gene=yihQ;locus_tag=FTT_1033;pseudo=true
NC_006570.2	RefSeq	gene	1045072	1046334	.	-	.	ID=gene1051;Name=ndh;Dbxref=GeneID:3191685;gbkey=Gene;gene=ndh;locus_tag=FTT_1034c
NC_006570.2	RefSeq	CDS	1045072	1046334	.	-	0	ID=cds933;Name=YP_170017.1;Parent=gene1051;Note=Similar to Q8UDU6 NADH dehydrogenase from Agrobacterium tumefaciens %28strain C58 %2F ATCC 33970%29 %28438 aa%29. FASTA: opt: 826 Z-score: 983.7 E%28%29: 6.7e-47 Smith-Waterman score: 826%3B 32.854 identity in 417 aa overlap.;Dbxref=GOA:Q5NG25,InterPro:IPR013027,UniProtKB%2FTrEMBL:Q5NG25,Genbank:YP_170017.1,GeneID:3191685;gbkey=CDS;product=NADH dehydrogenase;protein_id=YP_170017.1;transl_table=11
NC_006570.2	RefSeq	gene	1046441	1048174	.	-	.	ID=gene1052;Name=rpoD;Dbxref=GeneID:3191979;gbkey=Gene;gene=rpoD;locus_tag=FTT_1035c
NC_006570.2	RefSeq	CDS	1046441	1048174	.	-	0	ID=cds934;Name=YP_170018.1;Parent=gene1052;Note=Similar to P77890 LprpoD %28RNA polymerase sigma factor%29 from Legionella pneumophila %28620 aa%29. FASTA: opt: 1367 Z-score: 1480.9 E%28%29: 1.4e-74 Smith-Waterman score: 1624%3B 47.182 identity in 621 aa overlap.;Dbxref=GOA:Q5NG24,InterPro:IPR014284,UniProtKB%2FTrEMBL:Q5NG24,Genbank:YP_170018.1,GeneID:3191979;gbkey=CDS;product=RNA polymerase sigma-70 factor;protein_id=YP_170018.1;transl_table=11
NC_006570.2	RefSeq	gene	1048194	1050011	.	-	.	ID=gene1053;Name=dnaG;Dbxref=GeneID:3191526;gbkey=Gene;gene=dnaG;locus_tag=FTT_1036c
NC_006570.2	RefSeq	CDS	1048194	1050011	.	-	0	ID=cds935;Name=YP_170019.1;Parent=gene1053;Note=Similar to Q8DEG2 DNA primase from Vibrio vulnificus %28587 aa%29. FASTA: opt: 1152 Z-score: 1324.3 E%28%29: 7.2e-66 Smith-Waterman score: 1155%3B 39.679 identity in 499 aa overlap.;Dbxref=GOA:Q5NG23,InterPro:IPR013264,UniProtKB%2FTrEMBL:Q5NG23,Genbank:YP_170019.1,GeneID:3191526;gbkey=CDS;product=DNA primase;protein_id=YP_170019.1;transl_table=11
NC_006570.2	RefSeq	gene	1050032	1050478	.	-	.	ID=gene1054;Name=FTT_1037c;Dbxref=GeneID:3192045;gbkey=Gene;locus_tag=FTT_1037c
NC_006570.2	RefSeq	CDS	1050032	1050478	.	-	0	ID=cds936;Name=YP_170020.1;Parent=gene1054;Note=Similar to Q87SL6 Conserved hypothetical protein from Vibrio parahaemolyticus %28147 aa%29. FASTA: opt: 473 Z-score: 548.0 E%28%29: 1.2e-22 Smith-Waterman score: 473%3B 47.586 identity in 145 aa overlap. ORF ftt1037c;Dbxref=GOA:Q5NG22,InterPro:IPR019004,UniProtKB%2FTrEMBL:Q5NG22,Genbank:YP_170020.1,GeneID:3192045;gbkey=CDS;product=hypothetical protein;protein_id=YP_170020.1;transl_table=11
NC_006570.2	RefSeq	gene	1050539	1050736	.	-	.	ID=gene1055;Name=rpsU;Dbxref=GeneID:3191008;gbkey=Gene;gene=rpsU;locus_tag=FTT_1038c
NC_006570.2	RefSeq	CDS	1050539	1050736	.	-	0	ID=cds937;Name=YP_170021.1;Parent=gene1055;Note=a small basic protein that is one of the last in the subunit assembly%3B omission does not prevent assembly but the subunit is inactive%3B binds central domain of 16S rRNA;Dbxref=GOA:Q5NG21,InterPro:IPR018278,UniProtKB%2FSwiss-Prot:Q5NG21,Genbank:YP_170021.1,GeneID:3191008;gbkey=CDS;product=30S ribosomal protein S21;protein_id=YP_170021.1;transl_table=11
NC_006570.2	RefSeq	gene	1050992	1052395	.	+	.	ID=gene1056;Name=dacB1;Dbxref=GeneID:3191495;gbkey=Gene;gene=dacB1;locus_tag=FTT_1039
NC_006570.2	RefSeq	CDS	1050992	1052395	.	+	0	ID=cds938;Name=YP_170022.1;Parent=gene1056;Note=Similar to Q83FD1 D-alanyl-D-alanine carboxypeptidase%2FD-alanyl-D-alanine-endopeptidase from Coxiella burnetii %28477 aa%29. FASTA: opt: 654 Z-score: 780.3 E%28%29: 1.4e-35 Smith-Waterman score: 654%3B 29.436 identity in 479 aa overlap.;Dbxref=GOA:Q5NG20,InterPro:IPR000667,UniProtKB%2FTrEMBL:Q5NG20,Genbank:YP_170022.1,GeneID:3191495;gbkey=CDS;product=D-alanyl-D-alanine carboxypeptidase;protein_id=YP_170022.1;transl_table=11
NC_006570.2	RefSeq	gene	1052396	1053007	.	+	.	ID=gene1057;Name=FTT_1040;Dbxref=GeneID:3192043;gbkey=Gene;locus_tag=FTT_1040
NC_006570.2	RefSeq	CDS	1052396	1053007	.	+	0	ID=cds939;Name=YP_170023.1;Parent=gene1057;Note=Similar to Q8EBG1 Conserved hypothetical protein from Shewanella oneidensis %28205 aa%29. FASTA: opt: 610 Z-score: 776.5 E%28%29: 2.3e-35 Smith-Waterman score: 610%3B 45.810 identity in 179 aa overlap. ORF ftt1040;Dbxref=UniProtKB%2FTrEMBL:Q5NG19,Genbank:YP_170023.1,GeneID:3192043;gbkey=CDS;product=lipoprotein;protein_id=YP_170023.1;transl_table=11
NC_006570.2	RefSeq	gene	1053023	1053439	.	+	.	ID=gene1058;Name=FTT_1041;Dbxref=GeneID:3192044;gbkey=Gene;locus_tag=FTT_1041
NC_006570.2	RefSeq	CDS	1053023	1053439	.	+	0	ID=cds940;Name=YP_170024.1;Parent=gene1058;Note=Similar to Q8ESG1 Hypothetical conserved protein from Oceanobacillus iheyensis %28134 aa%29. FASTA: opt: 215 Z-score: 303.3 E%28%29: 5.3e-09 Smith-Waterman score: 215%3B 32.773 identity in 119 aa overlap. ORF ftt1041;Dbxref=InterPro:IPR006683,UniProtKB%2FTrEMBL:Q5NG18,Genbank:YP_170024.1,GeneID:3192044;gbkey=CDS;product=hypothetical protein;protein_id=YP_170024.1;transl_table=11
NC_006570.2	RefSeq	gene	1053432	1054235	.	+	.	ID=gene1059;Name=FTT_1042;Dbxref=GeneID:3192041;gbkey=Gene;locus_tag=FTT_1042
NC_006570.2	RefSeq	CDS	1053432	1054235	.	+	0	ID=cds941;Name=YP_170025.1;Parent=gene1059;Note=TtcA%3B YdaO%3B catalyzes the thiolation of cytosine 32 in specific tRNAs;Dbxref=GOA:Q5NG17,InterPro:IPR014729,UniProtKB%2FSwiss-Prot:Q5NG17,Genbank:YP_170025.1,GeneID:3192041;gbkey=CDS;product=C32 tRNA thiolase;protein_id=YP_170025.1;transl_table=11
NC_006570.2	RefSeq	gene	1054249	1055061	.	+	.	ID=gene1060;Name=FTT_1043;Dbxref=GeneID:3192042;gbkey=Gene;locus_tag=FTT_1043
NC_006570.2	RefSeq	CDS	1054249	1055061	.	+	0	ID=cds942;Name=YP_170026.1;Parent=gene1060;Note=Similar to O32766 Macrophage infectivity potentiator from Legionella hackeliae %28249 aa%29. FASTA: opt: 235 Z-score: 273.3 E%28%29: 2.5e-07 Smith-Waterman score: 343%3B 27.599 identity in 279 aa overlap. ORF ftt1043;Dbxref=GOA:Q5NG16,InterPro:IPR001179,UniProtKB%2FTrEMBL:Q5NG16,Genbank:YP_170026.1,GeneID:3192042;gbkey=CDS;product=FKBP-type peptidylprolyl isomerase;protein_id=YP_170026.1;transl_table=11
NC_006570.2	RefSeq	gene	1055079	1056056	.	-	.	ID=gene1061;Name=ispB;Dbxref=GeneID:3190799;gbkey=Gene;gene=ispB;locus_tag=FTT_1044c
NC_006570.2	RefSeq	CDS	1055079	1056056	.	-	0	ID=cds943;Name=YP_170027.1;Parent=gene1061;Note=Similar to Q8EB79 Octaprenyl-diphosphate synthase from Shewanella oneidensis %28323 aa%29. FASTA: opt: 1117 Z-score: 1360.2 E%28%29: 7.1e-68 Smith-Waterman score: 1117%3B 53.704 identity in 324 aa overlap.;Dbxref=GOA:Q5NG15,InterPro:IPR017446,UniProtKB%2FTrEMBL:Q5NG15,Genbank:YP_170027.1,GeneID:3190799;gbkey=CDS;product=octaprenyl-diphosphate synthase;protein_id=YP_170027.1;transl_table=11
NC_006570.2	RefSeq	gene	1056146	1056577	.	-	.	ID=gene1062;Name=FTT_1045c;Dbxref=GeneID:3192040;gbkey=Gene;locus_tag=FTT_1045c
NC_006570.2	RefSeq	CDS	1056146	1056577	.	-	0	ID=cds944;Name=YP_170028.1;Parent=gene1062;Note=ORF ftt1045c;Dbxref=UniProtKB%2FTrEMBL:Q5NG14,Genbank:YP_170028.1,GeneID:3192040;gbkey=CDS;product=hypothetical protein;protein_id=YP_170028.1;transl_table=11
NC_006570.2	RefSeq	gene	1056658	1057281	.	-	.	ID=gene1063;Name=FTT_1046c;Dbxref=GeneID:3192039;gbkey=Gene;locus_tag=FTT_1046c
NC_006570.2	RefSeq	CDS	1056658	1057281	.	-	0	ID=cds945;Name=YP_170029.1;Parent=gene1063;Note=ORF ftt1046c;Dbxref=UniProtKB%2FTrEMBL:Q5NG13,Genbank:YP_170029.1,GeneID:3192039;gbkey=CDS;product=hypothetical protein;protein_id=YP_170029.1;transl_table=11
NC_006570.2	RefSeq	gene	1057953	1058315	.	-	.	ID=gene1064;Name=FTT_1047c;Dbxref=GeneID:3192038;gbkey=Gene;locus_tag=FTT_1047c
NC_006570.2	RefSeq	CDS	1057953	1058315	.	-	0	ID=cds946;Name=YP_170030.2;Parent=gene1064;Note=ORF ftt1047c;Dbxref=UniProtKB%2FTrEMBL:Q5NG12,Genbank:YP_170030.2,GeneID:3192038;gbkey=CDS;product=hypothetical protein;protein_id=YP_170030.2;transl_table=11
NC_006570.2	RefSeq	gene	1058367	1058933	.	-	.	ID=gene1065;Name=FTT_1048c;Dbxref=GeneID:3192037;gbkey=Gene;locus_tag=FTT_1048c
NC_006570.2	RefSeq	CDS	1058367	1058933	.	-	0	ID=cds947;Name=YP_170031.2;Parent=gene1065;Note=ORF ftt1048c;Dbxref=UniProtKB%2FTrEMBL:Q5NG11,Genbank:YP_170031.2,GeneID:3192037;gbkey=CDS;product=hypothetical protein;protein_id=YP_170031.2;transl_table=11
NC_006570.2	RefSeq	gene	1059358	1059915	.	-	.	ID=gene1066;Name=cysC;Dbxref=GeneID:3192389;gbkey=Gene;gene=cysC;locus_tag=FTT_1049c;pseudo=true
NC_006570.2	RefSeq	gene	1059979	1061391	.	-	.	ID=gene1067;Name=cysN;Dbxref=GeneID:3191498;gbkey=Gene;gene=cysN;locus_tag=FTT_1050c
NC_006570.2	RefSeq	CDS	1059979	1061391	.	-	0	ID=cds948;Name=YP_170032.1;Parent=gene1067;Note=Similar to CYSN_VIBPA %28Q87SX9%29 Sulfate adenylyltransferase subunit 1 from Vibrio parahaemolyticus %28476 aa%29. FASTA: opt: 1823 Z-score: 2170.8 E%28%29: 5e-113 Smith-Waterman score: 1823%3B 59.488 identity in 469 aa overlap.;Dbxref=GOA:Q5NG10,InterPro:IPR011779,UniProtKB%2FSwiss-Prot:Q5NG10,Genbank:YP_170032.1,GeneID:3191498;gbkey=CDS;product=sulfate adenylyltransferase;protein_id=YP_170032.1;transl_table=11
NC_006570.2	RefSeq	gene	1061830	1061994	.	-	.	ID=gene1068;Name=FTT_1051c;Dbxref=GeneID:3192036;gbkey=Gene;locus_tag=FTT_1051c
NC_006570.2	RefSeq	CDS	1061830	1061994	.	-	0	ID=cds949;Name=YP_170033.1;Parent=gene1068;Note=ORF ftt1051c;Dbxref=UniProtKB%2FTrEMBL:Q5NG09,Genbank:YP_170033.1,GeneID:3192036;gbkey=CDS;product=hypothetical protein;protein_id=YP_170033.1;transl_table=11
NC_006570.2	RefSeq	gene	1062454	1062660	.	-	.	ID=gene1069;Name=FTT_1052c;Dbxref=GeneID:3192035;gbkey=Gene;locus_tag=FTT_1052c
NC_006570.2	RefSeq	CDS	1062454	1062660	.	-	0	ID=cds950;Name=YP_170034.1;Parent=gene1069;Note=ORF ftt1052c;Dbxref=UniProtKB%2FTrEMBL:Q5NG08,Genbank:YP_170034.1,GeneID:3192035;gbkey=CDS;product=hypothetical protein;protein_id=YP_170034.1;transl_table=11
NC_006570.2	RefSeq	gene	1063612	1064310	.	-	.	ID=gene1070;Name=FTT_1053c;Dbxref=GeneID:3192034;gbkey=Gene;locus_tag=FTT_1053c;pseudo=true
NC_006570.2	RefSeq	repeat_region	1063622	1063639	.	-	.	ID=id138;Note=18 bp ISFtu3 terminal inverted repeat;Dbxref=GeneID:3192034;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	1064348	1064365	.	-	.	ID=id139;Note=18 bp ISFtu3 terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	gene	1064388	1064876	.	-	.	ID=gene1071;Name=rimI;Dbxref=GeneID:3191621;gbkey=Gene;gene=rimI;locus_tag=FTT_1054c
NC_006570.2	RefSeq	CDS	1064388	1064876	.	-	0	ID=cds951;Name=YP_170035.1;Parent=gene1071;Note=Similar to RIMI_ECOLI %28P09453%29 Ribosomal-protein-alanine acetyltransferase %28148 aa%29. FASTA: opt: 237 Z-score: 305.5 E%28%29: 4e-09 Smith-Waterman score: 237%3B 36.585 identity in 123 aa overlap.;Dbxref=GOA:Q5NG07,InterPro:IPR016181,UniProtKB%2FTrEMBL:Q5NG07,Genbank:YP_170035.1,GeneID:3191621;gbkey=CDS;product=ribosomal-protein-alanine acetyltransferase;protein_id=YP_170035.1;transl_table=11
NC_006570.2	RefSeq	gene	1064854	1065279	.	-	.	ID=gene1072;Name=FTT_1055c;Dbxref=GeneID:3192031;gbkey=Gene;locus_tag=FTT_1055c
NC_006570.2	RefSeq	CDS	1064854	1065279	.	-	0	ID=cds952;Name=YP_170036.1;Parent=gene1072;Note=ORF ftt1055c;Dbxref=UniProtKB%2FTrEMBL:Q5NG06,Genbank:YP_170036.1,GeneID:3192031;gbkey=CDS;product=hypothetical protein;protein_id=YP_170036.1;transl_table=11
NC_006570.2	RefSeq	gene	1065279	1066094	.	-	.	ID=gene1073;Name=rluB;Dbxref=GeneID:3191617;gbkey=Gene;gene=rluB;locus_tag=FTT_1056c
NC_006570.2	RefSeq	CDS	1065279	1066094	.	-	0	ID=cds953;Name=YP_170037.1;Parent=gene1073;Note=Similar to Q8ZEG0 Ribosomal large subunit pseudouridine synthase B from Yersinia pestis %28318 aa%29. FASTA: opt: 938 Z-score: 1164.9 E%28%29: 5.4e-57 Smith-Waterman score: 938%3B 56.705identity in 261 aa overlap.;Dbxref=GOA:Q5NG05,InterPro:IPR018496,UniProtKB%2FTrEMBL:Q5NG05,Genbank:YP_170037.1,GeneID:3191617;gbkey=CDS;product=ribosomal large subunit pseudouridine synthase B;protein_id=YP_170037.1;transl_table=11
NC_006570.2	RefSeq	gene	1066087	1066992	.	-	.	ID=gene1074;Name=FTT_1057c;Dbxref=GeneID:3192032;gbkey=Gene;locus_tag=FTT_1057c
NC_006570.2	RefSeq	CDS	1066087	1066992	.	-	0	ID=cds954;Name=YP_170038.1;Parent=gene1074;Note=Similar to Q9KRM4 Fimbrial biogenesis and twitching motility protein%2C  from Vibrio cholerae %28237 aa%29. FASTA: opt: 249 Z-score: 293.4 E%28%29: 1.9e-08 Smith-Waterman score: 249%3B 25.346 identity in 217 aa overlap. Tetratrico peptide repeat %28TPR%29 containing protein. Shows a weak similarity to the lipoprotein pilF %28Pseudomonas%29 that has an N-terminal type II %28lipoprotein%29 signal sequence%2C followed by six tandem degenerated 34-amino acid repeats%2C which are involved in protein-protein interactions. ORF ftt1057c;Dbxref=GOA:Q5NG04,InterPro:IPR013026,UniProtKB%2FTrEMBL:Q5NG04,Genbank:YP_170038.1,GeneID:3192032;gbkey=CDS;product=Type IV pili lipoprotein;protein_id=YP_170038.1;transl_table=11
NC_006570.2	RefSeq	gene	1066982	1068094	.	-	.	ID=gene1075;Name=FTT_1058c;Dbxref=GeneID:3192030;gbkey=Gene;locus_tag=FTT_1058c
NC_006570.2	RefSeq	CDS	1066982	1068094	.	-	0	ID=cds955;Name=YP_170039.1;Parent=gene1075;Note=Similar to Y2A6_PSEAE %28Q51385%29 Hypothetical protein PA3806 from Pseudomonas aeruginosa %28379 aa%29. FASTA: opt: 1458 Z-score: 1752.5 E%28%29: 1e-89 Smith-Waterman score: 1458%3B 60.434 identity in 369 aa overlap. ORF ftt1058c;Dbxref=GOA:Q5NG03,InterPro:IPR007197,UniProtKB%2FSwiss-Prot:Q5NG03,Genbank:YP_170039.1,GeneID:3192030;gbkey=CDS;product=radical SAM superfamily protein;protein_id=YP_170039.1;transl_table=11
NC_006570.2	RefSeq	gene	1068125	1069522	.	-	.	ID=gene1076;Name=dnaB;Dbxref=GeneID:3191525;gbkey=Gene;gene=dnaB;locus_tag=FTT_1059c
NC_006570.2	RefSeq	CDS	1068125	1069522	.	-	0	ID=cds956;Name=YP_170040.1;Parent=gene1076;Note=Similar to DNAB_PASMU %28Q9CNL6%29 Replicative DNA helicase from Pasteurella multocida %28467 aa%29. FASTA: opt: 1484 Z-score: 1719.2 E%28%29: 7.2e-88 Smith-Waterman score: 1484%3B 51.016 identity in 443 aa overlap.;Dbxref=GOA:Q5NG02,InterPro:IPR016136,UniProtKB%2FTrEMBL:Q5NG02,Genbank:YP_170040.1,GeneID:3191525;gbkey=CDS;product=replicative DNA helicase;protein_id=YP_170040.1;transl_table=11
NC_006570.2	RefSeq	gene	1069610	1070065	.	-	.	ID=gene1077;Name=rplI;Dbxref=GeneID:3192016;gbkey=Gene;gene=rplI;locus_tag=FTT_1060c
NC_006570.2	RefSeq	CDS	1069610	1070065	.	-	0	ID=cds957;Name=YP_170041.1;Parent=gene1077;Note=in Escherichia coli this protein is wrapped around the base of the L1 stalk;Dbxref=GOA:Q5NG01,InterPro:IPR000244,UniProtKB%2FSwiss-Prot:Q5NG01,Genbank:YP_170041.1,GeneID:3192016;gbkey=CDS;product=50S ribosomal protein L9;protein_id=YP_170041.1;transl_table=11
NC_006570.2	RefSeq	gene	1070084	1070302	.	-	.	ID=gene1078;Name=rpsR;Dbxref=GeneID:3192527;gbkey=Gene;gene=rpsR;locus_tag=FTT_1061c
NC_006570.2	RefSeq	CDS	1070084	1070302	.	-	0	ID=cds958;Name=YP_170042.1;Parent=gene1078;Note=binds as a heterodimer with protein S6 to the central domain of the 16S rRNA%3B helps stabilize the platform of the 30S subunit;Dbxref=GOA:Q5NG00,InterPro:IPR018275,UniProtKB%2FSwiss-Prot:Q5NG00,Genbank:YP_170042.1,GeneID:3192527;gbkey=CDS;product=30S ribosomal protein S18;protein_id=YP_170042.1;transl_table=11
NC_006570.2	RefSeq	gene	1070318	1070653	.	-	.	ID=gene1079;Name=rpsF;Dbxref=GeneID:3191971;gbkey=Gene;gene=rpsF;locus_tag=FTT_1062c
NC_006570.2	RefSeq	CDS	1070318	1070653	.	-	0	ID=cds959;Name=YP_170043.1;Parent=gene1079;Note=binds cooperatively with S18 to the S15-16S complex%2C allowing platform assembly to continue with S11 and S21;Dbxref=GOA:Q5NFZ9,InterPro:IPR014717,UniProtKB%2FSwiss-Prot:Q5NFZ9,Genbank:YP_170043.1,GeneID:3191971;gbkey=CDS;product=30S ribosomal protein S6;protein_id=YP_170043.1;transl_table=11
NC_006570.2	RefSeq	gene	1071331	1072257	.	+	.	ID=gene1080;Name=hemF;Dbxref=GeneID:3192419;gbkey=Gene;gene=hemF;locus_tag=FTT_1063
NC_006570.2	RefSeq	CDS	1071331	1072257	.	+	0	ID=cds960;Name=YP_170044.1;Parent=gene1080;Note=catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis;Dbxref=GOA:Q5NFZ8,InterPro:IPR018375,UniProtKB%2FTrEMBL:Q5NFZ8,Genbank:YP_170044.1,GeneID:3192419;gbkey=CDS;product=coproporphyrinogen III oxidase;protein_id=YP_170044.1;transl_table=11
NC_006570.2	RefSeq	gene	1072282	1072872	.	+	.	ID=gene1081;Name=FTT_1064;Dbxref=GeneID:3192029;gbkey=Gene;locus_tag=FTT_1064
NC_006570.2	RefSeq	CDS	1072282	1072872	.	+	0	ID=cds961;Name=YP_170045.1;Parent=gene1081;Note=Shows weak similarity to histidine acid phosphatase family. ORF ftt1064;Dbxref=GOA:Q5NFZ7,InterPro:IPR000560,UniProtKB%2FTrEMBL:Q5NFZ7,Genbank:YP_170045.1,GeneID:3192029;gbkey=CDS;product=hypothetical protein;protein_id=YP_170045.1;transl_table=11
NC_006570.2	RefSeq	repeat_region	1073312	1073323	.	-	.	ID=id140;Note=ISFtu1 12bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	gene	1073411	1074195	.	-	.	ID=gene1082;Name=isftu1;Dbxref=GeneID:3192478;gbkey=Gene;gene=isftu1;locus_tag=FTT_1065c
NC_006570.2	RefSeq	CDS	1073869	1074195	.	-	0	ID=cds962;Name=YP_170046.1;Parent=gene1082;Note=ISFtu1. Transposase%2C member of the IS630 Tc-1 mariner family. Identical to Q93EJ6  transposase from Francisella tularensis %28118 aa%29 from aa 144-261. Identical to Q93EJ7  transposase from Francisella tularensis %28126 aa%29 from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF%27s. ORF1 %28identical to Q93EJ7%29 contains a programmed ribosomal frameshifting motif%2C 5%27-AAAAAAAG-3%27 at aa position 109 which permits frameshifting to ORF2 %28identical to Q93EJ6%29 to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family%2C and also mariner elements%2C show that this transposase shares strongly conserved residues%2C including a fully conserved dipeptide%2CAsp-Glu %28DE%29%2C and a block consisting of a fully conserved Asp and highly conserved Glu%2C separated by 34 or 35 residues %28D35E%29. The conserved dipeptide is only present if ribosomal frameshifting occurs.;Dbxref=UniProtKB%2FTrEMBL:Q5NIH2,Genbank:YP_170046.1,GeneID:3192478;gbkey=CDS;product=transposase;protein_id=YP_170046.1;transl_table=11
NC_006570.2	RefSeq	CDS	1073411	1073869	.	-	0	ID=cds962;Name=YP_170046.1;Parent=gene1082;Note=ISFtu1. Transposase%2C member of the IS630 Tc-1 mariner family. Identical to Q93EJ6  transposase from Francisella tularensis %28118 aa%29 from aa 144-261. Identical to Q93EJ7  transposase from Francisella tularensis %28126 aa%29 from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF%27s. ORF1 %28identical to Q93EJ7%29 contains a programmed ribosomal frameshifting motif%2C 5%27-AAAAAAAG-3%27 at aa position 109 which permits frameshifting to ORF2 %28identical to Q93EJ6%29 to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family%2C and also mariner elements%2C show that this transposase shares strongly conserved residues%2C including a fully conserved dipeptide%2CAsp-Glu %28DE%29%2C and a block consisting of a fully conserved Asp and highly conserved Glu%2C separated by 34 or 35 residues %28D35E%29. The conserved dipeptide is only present if ribosomal frameshifting occurs.;Dbxref=UniProtKB%2FTrEMBL:Q5NIH2,Genbank:YP_170046.1,GeneID:3192478;gbkey=CDS;product=transposase;protein_id=YP_170046.1;transl_table=11
NC_006570.2	RefSeq	repeat_region	1074216	1074231	.	-	.	ID=id141;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	1074232	1074247	.	-	.	ID=id142;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	1074248	1074259	.	-	.	ID=id143;Note=ISFtu1 12bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	gene	1074364	1074738	.	-	.	ID=gene1083;Name=FTT_1066c;Dbxref=GeneID:3191073;gbkey=Gene;locus_tag=FTT_1066c
NC_006570.2	RefSeq	CDS	1074364	1074738	.	-	0	ID=cds963;Name=YP_170047.1;Parent=gene1083;Note=ORF ftt1066c;Dbxref=UniProtKB%2FTrEMBL:Q5NFZ5,Genbank:YP_170047.1,GeneID:3191073;gbkey=CDS;product=hypothetical protein;protein_id=YP_170047.1;transl_table=11
NC_006570.2	RefSeq	gene	1074805	1077809	.	-	.	ID=gene1084;Name=res;Dbxref=GeneID:3191630;gbkey=Gene;gene=res;locus_tag=FTT_1067c;pseudo=true
NC_006570.2	RefSeq	gene	1078054	1078632	.	-	.	ID=gene1085;Name=FTT_1068c;Dbxref=GeneID:3192027;gbkey=Gene;locus_tag=FTT_1068c
NC_006570.2	RefSeq	CDS	1078054	1078632	.	-	0	ID=cds964;Name=YP_170048.1;Parent=gene1085;Note=ORF ftt1068c;Dbxref=InterPro:IPR011091,UniProtKB%2FTrEMBL:Q5NFZ4,Genbank:YP_170048.1,GeneID:3192027;gbkey=CDS;product=hypothetical protein;protein_id=YP_170048.1;transl_table=11
NC_006570.2	RefSeq	gene	1078721	1079626	.	-	.	ID=gene1086;Name=FTT_1069c;Dbxref=GeneID:3192288;gbkey=Gene;locus_tag=FTT_1069c
NC_006570.2	RefSeq	CDS	1078721	1079626	.	-	0	ID=cds965;Name=YP_170049.1;Parent=gene1086;Note=ORF ftt1069c;Dbxref=UniProtKB%2FTrEMBL:Q5NFZ3,Genbank:YP_170049.1,GeneID:3192288;gbkey=CDS;product=hypothetical protein;protein_id=YP_170049.1;transl_table=11
NC_006570.2	RefSeq	gene	1079642	1082798	.	-	.	ID=gene1087;Name=FTT_1070c;Dbxref=GeneID:3192287;gbkey=Gene;locus_tag=FTT_1070c;pseudo=true
NC_006570.2	RefSeq	gene	1082895	1083401	.	-	.	ID=gene1088;Name=FTT_1071c;Dbxref=GeneID:3190794;gbkey=Gene;locus_tag=FTT_1071c
NC_006570.2	RefSeq	CDS	1082895	1083401	.	-	0	ID=cds966;Name=YP_170050.1;Parent=gene1088;Note=Similar to Q82XK5  antirestriction protein from Nitrosomonas europaea %28171 aa%29. FASTA: opt: 426 Z-score: 519.1 E%28%29: 5e-21 Smith-Waterman score: 426%3B 42.771 identity in 166 aa overlap. ORF ftt1071c;Dbxref=InterPro:IPR009899,UniProtKB%2FTrEMBL:Q5NFZ2,Genbank:YP_170050.1,GeneID:3190794;gbkey=CDS;product=hypothetical protein;protein_id=YP_170050.1;transl_table=11
NC_006570.2	RefSeq	gene	1084045	1084674	.	+	.	ID=gene1089;Name=FTT_1072;Dbxref=GeneID:3191071;gbkey=Gene;locus_tag=FTT_1072
NC_006570.2	RefSeq	CDS	1084045	1084674	.	+	0	ID=cds967;Name=YP_170051.1;Parent=gene1089;Note=ORF ftt1072;Dbxref=UniProtKB%2FTrEMBL:Q5NFZ1,Genbank:YP_170051.1,GeneID:3191071;gbkey=CDS;product=hypothetical protein;protein_id=YP_170051.1;transl_table=11
NC_006570.2	RefSeq	gene	1084830	1085201	.	-	.	ID=gene1090;Name=FTT_1073c;Dbxref=GeneID:3191964;gbkey=Gene;locus_tag=FTT_1073c
NC_006570.2	RefSeq	CDS	1084830	1085201	.	-	0	ID=cds968;Name=YP_170052.1;Parent=gene1090;Note=ORF ftt1073c;Dbxref=UniProtKB%2FTrEMBL:Q5NFZ0,Genbank:YP_170052.1,GeneID:3191964;gbkey=CDS;product=hypothetical protein;protein_id=YP_170052.1;transl_table=11
NC_006570.2	RefSeq	repeat_region	1085371	1085382	.	+	.	ID=id144;Note=ISFtu1 12bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	1085383	1085398	.	+	.	ID=id145;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	1085399	1085414	.	+	.	ID=id146;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;gbkey=repeat_region
NC_006570.2	RefSeq	gene	1085435	1086219	.	+	.	ID=gene1091;Name=isftu1;Dbxref=GeneID:3190915;gbkey=Gene;gene=isftu1;locus_tag=FTT_1074
NC_006570.2	RefSeq	CDS	1085435	1085761	.	+	0	ID=cds969;Name=YP_170053.1;Parent=gene1091;Note=ISFtu1. Transposase%2C member of the IS630 Tc-1 mariner family. Identical to Q93EJ6  transposase from Francisella tularensis %28118 aa%29 from aa 144-261. Identical to Q93EJ7  transposase from Francisella tularensis %28126 aa%29 from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF%27s. ORF1 %28identical to Q93EJ7%29 contains a programmed ribosomal frameshifting motif%2C 5%27-AAAAAAAG-3%27 at aa position 109 which permits frameshifting to ORF2 %28identical to Q93EJ6%29 to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family%2C and also mariner elements%2C show that this transposase shares strongly conserved residues%2C including a fully conserved dipeptide%2CAsp-Glu %28DE%29%2C and a block consisting of a fully conserved Asp and highly conserved Glu%2C separated by 34 or 35 residues %28D35E%29. The conserved dipeptide is only present if ribosomal frameshifting occurs.;Dbxref=UniProtKB%2FTrEMBL:Q5NIH2,Genbank:YP_170053.1,GeneID:3190915;gbkey=CDS;product=transposase;protein_id=YP_170053.1;transl_table=11
NC_006570.2	RefSeq	CDS	1085761	1086219	.	+	0	ID=cds969;Name=YP_170053.1;Parent=gene1091;Note=ISFtu1. Transposase%2C member of the IS630 Tc-1 mariner family. Identical to Q93EJ6  transposase from Francisella tularensis %28118 aa%29 from aa 144-261. Identical to Q93EJ7  transposase from Francisella tularensis %28126 aa%29 from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF%27s. ORF1 %28identical to Q93EJ7%29 contains a programmed ribosomal frameshifting motif%2C 5%27-AAAAAAAG-3%27 at aa position 109 which permits frameshifting to ORF2 %28identical to Q93EJ6%29 to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family%2C and also mariner elements%2C show that this transposase shares strongly conserved residues%2C including a fully conserved dipeptide%2CAsp-Glu %28DE%29%2C and a block consisting of a fully conserved Asp and highly conserved Glu%2C separated by 34 or 35 residues %28D35E%29. The conserved dipeptide is only present if ribosomal frameshifting occurs.;Dbxref=UniProtKB%2FTrEMBL:Q5NIH2,Genbank:YP_170053.1,GeneID:3190915;gbkey=CDS;product=transposase;protein_id=YP_170053.1;transl_table=11
NC_006570.2	RefSeq	repeat_region	1086307	1086318	.	+	.	ID=id147;Note=ISFtu1 12bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	gene	1087103	1087330	.	+	.	ID=gene1092;Name=FTT_1075;Dbxref=GeneID:3191962;gbkey=Gene;locus_tag=FTT_1075
NC_006570.2	RefSeq	CDS	1087103	1087330	.	+	0	ID=cds970;Name=YP_170054.1;Parent=gene1092;Note=Similar to Y4MF_RHISN %28P55565%29 Hypothetical transcriptional regulator y4mF from Rhizobium sp. %28strain NGR234%29 %2876 aa%29. FASTA: opt: 205 Z-score: 292.4 E%28%29: 2.1e-08 Smith-Waterman score: 205%3B 47.059identity in 68 aa overlap. ORF ftt1075;Dbxref=GOA:Q5NFY8,InterPro:IPR017507,UniProtKB%2FTrEMBL:Q5NFY8,Genbank:YP_170054.1,GeneID:3191962;gbkey=CDS;product=transcriptional regulator;protein_id=YP_170054.1;transl_table=11
NC_006570.2	RefSeq	gene	1087315	1088589	.	+	.	ID=gene1093;Name=hipA;Dbxref=GeneID:3192429;gbkey=Gene;gene=hipA;locus_tag=FTT_1076
NC_006570.2	RefSeq	CDS	1087315	1088589	.	+	0	ID=cds971;Name=YP_170055.1;Parent=gene1093;Note=Similar to Q82V03 Possible HipA protein from Nitrosomonas europaea %28429 aa%29. FASTA: opt: 1021 Z-score: 1249.8 E%28%29: 1e-61 Smith-Waterman score: 1021%3B 41.162 identity in 413 aa overlap.;Dbxref=InterPro:IPR017508,UniProtKB%2FTrEMBL:Q5NFY7,Genbank:YP_170055.1,GeneID:3192429;gbkey=CDS;product=transcriptional regulator;protein_id=YP_170055.1;transl_table=11
NC_006570.2	RefSeq	gene	1088713	1089099	.	-	.	ID=gene1094;Name=FTT_1077c;Dbxref=GeneID:3191963;gbkey=Gene;locus_tag=FTT_1077c
NC_006570.2	RefSeq	CDS	1088713	1089099	.	-	0	ID=cds972;Name=YP_170056.1;Parent=gene1094;Note=pseudogene. Bases 3-128 similar to the same homolog as for next upstream ORF%2C FRPC_NEIMC %28P55127%29 Iron-regulated protein frpC from Neisseria meningitidis %28serogroup C%29 %281829 aa%29. FASTA: opt: 118 Z-score: 143.0 bits: 35.9 E%28%29: 4.5 Smith-Waterman score: 120%3B 26.351 identity in 148 aa overlap %283-128:582-728%29. ORF ftt1077c;Dbxref=UniProtKB%2FTrEMBL:Q5NFY6,Genbank:YP_170056.1,GeneID:3191963;gbkey=CDS;product=hypothetical protein;protein_id=YP_170056.1;transl_table=11
NC_006570.2	RefSeq	gene	1089080	1089892	.	-	.	ID=gene1095;Name=FTT_1078c;Dbxref=GeneID:3191960;gbkey=Gene;locus_tag=FTT_1078c
NC_006570.2	RefSeq	CDS	1089080	1089892	.	-	0	ID=cds973;Name=YP_170057.1;Parent=gene1095;Note=Similar to FRPC_NEIMC %28P55127%29 Iron-regulated protein frpC from Neisseria meningitidis %28serogroup C%29 %281829 aa%29. FASTA: opt: 567 Z-score: 644.8 E%28%29: 5.1e-28 Smith-Waterman score: 567%3B 53.416identity in 161 aa overlap %28103-260:414-574%29.  pseudogene. Bases 103-260 similar to the same homolog as for the next downstream ORF. ORF ftt1078c;Dbxref=UniProtKB%2FTrEMBL:Q5NFY5,Genbank:YP_170057.1,GeneID:3191960;gbkey=CDS;product=hypothetical protein;protein_id=YP_170057.1;transl_table=11
NC_006570.2	RefSeq	gene	1089907	1090167	.	-	.	ID=gene1096;Name=FTT_1079c;Dbxref=GeneID:3191961;gbkey=Gene;locus_tag=FTT_1079c
NC_006570.2	RefSeq	CDS	1089907	1090167	.	-	0	ID=cds974;Name=YP_170058.1;Parent=gene1096;Note=ORF ftt1079c;Dbxref=UniProtKB%2FTrEMBL:Q5NFY4,Genbank:YP_170058.1,GeneID:3191961;gbkey=CDS;product=hypothetical protein;protein_id=YP_170058.1;transl_table=11
NC_006570.2	RefSeq	gene	1090184	1091062	.	-	.	ID=gene1097;Name=FTT_1080c;Dbxref=GeneID:3191959;gbkey=Gene;locus_tag=FTT_1080c
NC_006570.2	RefSeq	CDS	1090184	1091062	.	-	0	ID=cds975;Name=YP_170059.1;Parent=gene1097;Note=ORF ftt1080c;Dbxref=UniProtKB%2FTrEMBL:Q5NFY3,Genbank:YP_170059.1,GeneID:3191959;gbkey=CDS;product=hypothetical protein;protein_id=YP_170059.1;transl_table=11
NC_006570.2	RefSeq	gene	1091062	1091865	.	-	.	ID=gene1098;Name=FTT_1081c;Dbxref=GeneID:3191958;gbkey=Gene;locus_tag=FTT_1081c
NC_006570.2	RefSeq	CDS	1091062	1091865	.	-	0	ID=cds976;Name=YP_170060.1;Parent=gene1098;Note=ORF ftt1081c;Dbxref=UniProtKB%2FTrEMBL:Q5NFY2,Genbank:YP_170060.1,GeneID:3191958;gbkey=CDS;product=hypothetical protein;protein_id=YP_170060.1;transl_table=11
NC_006570.2	RefSeq	gene	1092091	1092513	.	+	.	ID=gene1099;Name=FTT_1082;Dbxref=GeneID:3191956;gbkey=Gene;locus_tag=FTT_1082
NC_006570.2	RefSeq	CDS	1092091	1092513	.	+	0	ID=cds977;Name=YP_170061.1;Parent=gene1099;Note=ORF ftt1082;Dbxref=UniProtKB%2FTrEMBL:Q5NFY1,Genbank:YP_170061.1,GeneID:3191956;gbkey=CDS;product=hypothetical protein;protein_id=YP_170061.1;transl_table=11
NC_006570.2	RefSeq	gene	1092529	1092786	.	-	.	ID=gene1100;Name=FTT_1083c;Dbxref=GeneID:3191955;gbkey=Gene;locus_tag=FTT_1083c
NC_006570.2	RefSeq	CDS	1092529	1092786	.	-	0	ID=cds978;Name=YP_170062.1;Parent=gene1100;Note=ORF ftt1083c;Dbxref=UniProtKB%2FTrEMBL:Q5NFY0,Genbank:YP_170062.1,GeneID:3191955;gbkey=CDS;product=hypothetical protein;protein_id=YP_170062.1;transl_table=11
NC_006570.2	RefSeq	gene	1092791	1093651	.	-	.	ID=gene1101;Name=rdgC;Dbxref=GeneID:3191644;gbkey=Gene;gene=rdgC;locus_tag=FTT_1084c
NC_006570.2	RefSeq	CDS	1092791	1093651	.	-	0	ID=cds979;Name=YP_170063.1;Parent=gene1101;Note=Required for efficient pilin antigenic variation;Dbxref=GOA:Q5NFX9,InterPro:IPR007476,UniProtKB%2FTrEMBL:Q5NFX9,Genbank:YP_170063.1,GeneID:3191644;gbkey=CDS;product=recombination associated protein;protein_id=YP_170063.1;transl_table=11
NC_006570.2	RefSeq	gene	1093833	1094831	.	+	.	ID=gene1102;Name=FTT_1085;Dbxref=GeneID:3191952;gbkey=Gene;locus_tag=FTT_1085
NC_006570.2	RefSeq	CDS	1093833	1094831	.	+	0	ID=cds980;Name=YP_170064.1;Parent=gene1102;Note=Similar to YM90_SHEON %28Q8EES8%29 Hypothetical UPF0176 protein SO229 from Shewanella oneidensis %28333 aa%29. FASTA: initn: 1561 init1: 1472 opt: 1479 Z-score: 1729.8 E%28%29: 1.9e-88 Smith-Waterman score: 1479%3B 63.636identity in 330 aa overlap. ORF ftt1085;Dbxref=InterPro:IPR001763,UniProtKB%2FSwiss-Prot:Q5NFX8,Genbank:YP_170064.1,GeneID:3191952;gbkey=CDS;product=hypothetical protein;protein_id=YP_170064.1;transl_table=11
NC_006570.2	RefSeq	gene	1094962	1095792	.	-	.	ID=gene1103;Name=FTT_1086c;Dbxref=GeneID:3191953;gbkey=Gene;locus_tag=FTT_1086c
NC_006570.2	RefSeq	CDS	1094962	1095792	.	-	0	ID=cds981;Name=YP_170065.1;Parent=gene1103;Note=Similar to Q8EFU7 Conserved hypothetical protein from Shewanella oneidensis %28279 aa%29. FASTA: 351 opt: 789 Z-score: 963.7 E%28%29: 8.8e-46 Smith-Waterman score: 789%3B 45.290 identity in 276 aa overlap. ORF ftt1086c;Dbxref=InterPro:IPR014464,UniProtKB%2FTrEMBL:Q5NFX7,Genbank:YP_170065.1,GeneID:3191953;gbkey=CDS;product=hypothetical protein;protein_id=YP_170065.1;transl_table=11
NC_006570.2	RefSeq	gene	1095848	1097863	.	-	.	ID=gene1104;Name=rep;Dbxref=GeneID:3191631;gbkey=Gene;gene=rep;locus_tag=FTT_1087c
NC_006570.2	RefSeq	CDS	1095848	1097863	.	-	0	ID=cds982;Name=YP_170066.1;Parent=gene1104;Note=Similar to REP_HAEIN %28P44804%29 ATP-dependent DNA helicase rep from Haemophilus influenzae %28670 aa%29. FASTA: opt: 2055 Z-score: 2350.5 E%28%29: 5e-123 Smith-Waterman score: 2055%3B 47.806 identity in 661 aa overlap.;Dbxref=GOA:Q5NFX6,InterPro:IPR014017,UniProtKB%2FTrEMBL:Q5NFX6,Genbank:YP_170066.1,GeneID:3191631;gbkey=CDS;product=ATP-dependent DNA helicase;protein_id=YP_170066.1;transl_table=11
NC_006570.2	RefSeq	gene	1097857	1098603	.	-	.	ID=gene1105;Name=FTT_1088c;Dbxref=GeneID:3191950;gbkey=Gene;locus_tag=FTT_1088c
NC_006570.2	RefSeq	CDS	1097857	1098603	.	-	0	ID=cds983;Name=YP_170067.1;Parent=gene1105;Note=ORF ftt1088c;Dbxref=GOA:Q5NFX5,InterPro:IPR017703,UniProtKB%2FTrEMBL:Q5NFX5,Genbank:YP_170067.1,GeneID:3191950;gbkey=CDS;product=hypothetical protein;protein_id=YP_170067.1;transl_table=11
NC_006570.2	RefSeq	gene	1099211	1099732	.	+	.	ID=gene1106;Name=FTT_1089;Dbxref=GeneID:3191951;gbkey=Gene;locus_tag=FTT_1089
NC_006570.2	RefSeq	CDS	1099211	1099732	.	+	0	ID=cds984;Name=YP_170068.1;Parent=gene1106;Note=Similar to Q8EW31 Hypothetical protein from Mycoplasma penetrans %28194 aa%29. FASTA: opt: 235 Z-score: 294.7 E%28%29: 1.6e-08 Smith-Waterman score: 235%3B 31.515 identity in 165 aa overlap. ORF ftt1089;Dbxref=GOA:Q5NFX4,InterPro:IPR000868,UniProtKB%2FTrEMBL:Q5NFX4,Genbank:YP_170068.1,GeneID:3191951;gbkey=CDS;product=isochorismatase hydrolase family protein;protein_id=YP_170068.1;transl_table=11
NC_006570.2	RefSeq	gene	1099729	1100406	.	+	.	ID=gene1107;Name=FTT_1090;Dbxref=GeneID:3191265;gbkey=Gene;locus_tag=FTT_1090
NC_006570.2	RefSeq	CDS	1099729	1100406	.	+	0	ID=cds985;Name=YP_170069.1;Parent=gene1107;Note=Similar to Q8A546  membrane transporter involved in nicotinamide mononucleotide transport from Bacteroides thetaiotaomicron %28188 aa%29. FASTA: opt: 285 Z-score: 336.8 E%28%29: 7.2e-11 Smith-Waterman score: 302%3B 29.592 identity in 196 aa overlap. ORF ftt1090;Dbxref=GOA:Q5NFX3,InterPro:IPR006419,UniProtKB%2FTrEMBL:Q5NFX3,Genbank:YP_170069.1,GeneID:3191265;gbkey=CDS;product=hypothetical protein;protein_id=YP_170069.1;transl_table=11
NC_006570.2	RefSeq	gene	1100419	1100907	.	+	.	ID=gene1108;Name=FTT_1091;Dbxref=GeneID:3191070;gbkey=Gene;locus_tag=FTT_1091
NC_006570.2	RefSeq	CDS	1100419	1100907	.	+	0	ID=cds986;Name=YP_170070.1;Parent=gene1108;Note=Similar to Q9AD62  hydrolase %28193 aa%29. FASTA: opt: 251 Z-score: 311.7 E%28%29: 1.8e-09 Smith-Waterman score: 251%3B 32.075identity in 159 aa overlap. ORF ftt1091;Dbxref=GOA:Q5NFX2,InterPro:IPR000868,UniProtKB%2FTrEMBL:Q5NFX2,Genbank:YP_170070.1,GeneID:3191070;gbkey=CDS;product=isochorismatase hydrolase family protein;protein_id=YP_170070.1;transl_table=11
NC_006570.2	RefSeq	gene	1101064	1101522	.	-	.	ID=gene1109;Name=FTT_1092c;Dbxref=GeneID:3191262;gbkey=Gene;locus_tag=FTT_1092c
NC_006570.2	RefSeq	CDS	1101064	1101522	.	-	0	ID=cds987;Name=YP_170071.1;Parent=gene1109;Note=ORF ftt1092c;Dbxref=UniProtKB%2FTrEMBL:Q5NFX1,Genbank:YP_170071.1,GeneID:3191262;gbkey=CDS;product=hypothetical protein;protein_id=YP_170071.1;transl_table=11
NC_006570.2	RefSeq	gene	1101545	1102510	.	-	.	ID=gene1110;Name=talA;Dbxref=GeneID:3190749;gbkey=Gene;gene=talA;locus_tag=FTT_1093c
NC_006570.2	RefSeq	CDS	1101545	1102510	.	-	0	ID=cds988;Name=YP_170072.1;Parent=gene1110;Note=Similar to Q8EBH2 Transaldolase from Shewanella oneidensis %28318 aa%29. FASTA: opt: 1030 Z-score: 1249.3 E%28%29: 1.1e-61 Smith-Waterman score: 1030%3B 50.938 identity in 320 aa overlap.;Dbxref=GOA:Q5NFX0,InterPro:IPR018225,UniProtKB%2FTrEMBL:Q5NFX0,Genbank:YP_170072.1,GeneID:3190749;gbkey=CDS;product=transaldolase B;protein_id=YP_170072.1;transl_table=11
NC_006570.2	RefSeq	gene	1102644	1104059	.	-	.	ID=gene1111;Name=FTT_1094c;Dbxref=GeneID:3191261;gbkey=Gene;locus_tag=FTT_1094c
NC_006570.2	RefSeq	CDS	1102644	1104059	.	-	0	ID=cds989;Name=YP_170073.1;Parent=gene1111;Note=Similar to Q83DX0 Cytosol aminopeptidase family protein from Coxiella burnetii %28458 aa%29. FASTA: opt: 1273 Z-score: 1536.1 E%28%29: 1.1e-77 Smith-Waterman score: 1273%3B 41.830 identity in 459 aa overlap. ORF ftt1094c;Dbxref=GOA:Q5NFW9,InterPro:IPR011356,UniProtKB%2FTrEMBL:Q5NFW9,Genbank:YP_170073.1,GeneID:3191261;gbkey=CDS;product=cytosol aminopeptidase;protein_id=YP_170073.1;transl_table=11
NC_006570.2	RefSeq	gene	1104026	1105408	.	-	.	ID=gene1112;Name=FTT_1095c;Dbxref=GeneID:3191260;gbkey=Gene;locus_tag=FTT_1095c
NC_006570.2	RefSeq	CDS	1104026	1105408	.	-	0	ID=cds990;Name=YP_170074.1;Parent=gene1112;Note=Similar to Q88DA4 Outer membrane efflux protein from Pseudomonas putida %28strain KT2440%29 %28477 aa%29. FASTA: opt: 405 Z-score: 484.1 E%28%29: 4.5e-19 Smith-Waterman score: 405%3B 22.907 identity in 454 aa overlap. Not a membrane protein. ORF ftt1095c;Dbxref=GOA:Q5NFW8,InterPro:IPR003423,UniProtKB%2FTrEMBL:Q5NFW8,Genbank:YP_170074.1,GeneID:3191260;gbkey=CDS;product=hypothetical protein;protein_id=YP_170074.1;transl_table=11
NC_006570.2	RefSeq	gene	1105416	1108013	.	-	.	ID=gene1113;Name=alaS;Dbxref=GeneID:3192392;gbkey=Gene;gene=alaS;locus_tag=FTT_1096c
NC_006570.2	RefSeq	CDS	1105416	1108013	.	-	0	ID=cds991;Name=YP_170075.1;Parent=gene1113;Note=Catalyzes a two-step reaction%2C first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA;Dbxref=GOA:Q5NFW7,InterPro:IPR018165,UniProtKB%2FSwiss-Prot:Q5NFW7,Genbank:YP_170075.1,GeneID:3192392;gbkey=CDS;product=alanyl-tRNA synthetase;protein_id=YP_170075.1;transl_table=11
NC_006570.2	RefSeq	gene	1108169	1108615	.	+	.	ID=gene1114;Name=FTT_1097;Dbxref=GeneID:3191259;gbkey=Gene;locus_tag=FTT_1097
NC_006570.2	RefSeq	CDS	1108169	1108615	.	+	0	ID=cds992;Name=YP_170076.1;Parent=gene1114;Note=ORF ftt1097;Dbxref=UniProtKB%2FTrEMBL:Q5NFW6,Genbank:YP_170076.1,GeneID:3191259;gbkey=CDS;product=hypothetical protein;protein_id=YP_170076.1;transl_table=11
NC_006570.2	RefSeq	gene	1108612	1110677	.	-	.	ID=gene1115;Name=FTT_1098c;Dbxref=GeneID:3191256;gbkey=Gene;locus_tag=FTT_1098c;pseudo=true
NC_006570.2	RefSeq	gene	1110704	1111039	.	-	.	ID=gene1116;Name=FTT_1099c;Dbxref=GeneID:3191257;gbkey=Gene;locus_tag=FTT_1099c
NC_006570.2	RefSeq	CDS	1110704	1111039	.	-	0	ID=cds993;Name=YP_170077.1;Parent=gene1116;Note=ORF ftt1099c;Dbxref=UniProtKB%2FTrEMBL:Q5NFW5,Genbank:YP_170077.1,GeneID:3191257;gbkey=CDS;product=hypothetical protein;protein_id=YP_170077.1;transl_table=11
NC_006570.2	RefSeq	gene	1111142	1111477	.	+	.	ID=gene1117;Name=FTT_1100;Dbxref=GeneID:3191255;gbkey=Gene;locus_tag=FTT_1100
NC_006570.2	RefSeq	CDS	1111142	1111477	.	+	0	ID=cds994;Name=YP_170078.1;Parent=gene1117;Note=Similar to Q83DY7 Iojap-related protein from Coxiella burnetii %28116 aa%29. FASTA: opt: 326 Z-score: 425.2 E%28%29: 8.6e-16 Smith-Waterman score: 326%3B 41.509 identity in 106 aa overlap. ORF ftt1100;Dbxref=InterPro:IPR004394,UniProtKB%2FTrEMBL:Q5NFW4,Genbank:YP_170078.1,GeneID:3191255;gbkey=CDS;product=hypothetical protein;protein_id=YP_170078.1;transl_table=11
NC_006570.2	RefSeq	gene	1111480	1112523	.	+	.	ID=gene1118;Name=yjeS;Dbxref=GeneID:3192383;gbkey=Gene;gene=yjeS;locus_tag=FTT_1101;pseudo=true
NC_006570.2	RefSeq	gene	1112651	1112941	.	+	.	ID=gene1119;Name=FTT_1102;Dbxref=GeneID:3191253;gbkey=Gene;locus_tag=FTT_1102;pseudo=true
NC_006570.2	RefSeq	gene	1112962	1114059	.	+	.	ID=gene1120;Name=FTT_1103;Dbxref=GeneID:3191250;gbkey=Gene;locus_tag=FTT_1103
NC_006570.2	RefSeq	CDS	1112962	1114059	.	+	0	ID=cds995;Name=YP_170079.1;Parent=gene1120;Note=Similar to Q8Z9P6  exported protein from Salmonella typhi %28281 aa%29. FASTA: opt: 392 Z-score: 435.6 E%28%29: 2.3e-16 Smith-Waterman score: 392%3B 33.491 identity in 212 aa overlap. ORF ftt1103;Dbxref=GOA:Q5NFW3,InterPro:IPR017936,UniProtKB%2FTrEMBL:Q5NFW3,Genbank:YP_170079.1,GeneID:3191250;gbkey=CDS;product=lipoprotein;protein_id=YP_170079.1;transl_table=11
NC_006570.2	RefSeq	gene	1114346	1115546	.	+	.	ID=gene1121;Name=bcr1;Dbxref=GeneID:3192522;gbkey=Gene;gene=bcr1;locus_tag=FTT_1104;pseudo=true
NC_006570.2	RefSeq	gene	1115543	1116397	.	-	.	ID=gene1122;Name=msrA1;Dbxref=GeneID:3191668;gbkey=Gene;gene=msrA1;locus_tag=FTT_1105c
NC_006570.2	RefSeq	CDS	1115543	1116397	.	-	0	ID=cds996;Name=YP_170080.1;Parent=gene1122;Note=this fusion consists of methionine sulfoxide B reductase at the N-terminus and A at the C-terminus%3B A and B are stereospecific enzymes that recognize the damaged produces of oxidative stress%2C S and R epimers of methionine sulfoxide%2C respectively%3B a fusion protein of these enzymes with thioredoxin provides protection against oxidative stress in Neisseria gonorrhoeae;Dbxref=GOA:Q5NFW2,InterPro:IPR002579,UniProtKB%2FTrEMBL:Q5NFW2,Genbank:YP_170080.1,GeneID:3191668;gbkey=CDS;product=bifunctional methionine sulfoxide reductase B%2FA protein;protein_id=YP_170080.1;transl_table=11
NC_006570.2	RefSeq	gene	1116526	1117002	.	+	.	ID=gene1123;Name=tspO;Dbxref=GeneID:3191010;gbkey=Gene;gene=tspO;locus_tag=FTT_1106
NC_006570.2	RefSeq	CDS	1116526	1117002	.	+	0	ID=cds997;Name=YP_170081.1;Parent=gene1123;Note=Similar to Q8TID9 Benzodiazepine receptor TspO from Methanosarcina acetivorans %28160 aa%29. FASTA: opt: 417 Z-score: 464.9 E%28%29: 5.3e-18 Smith-Waterman score: 417%3B 40.994 identity in 161 aa overlap.;Dbxref=GOA:Q5NFW1,InterPro:IPR004307,UniProtKB%2FTrEMBL:Q5NFW1,Genbank:YP_170081.1,GeneID:3191010;gbkey=CDS;product=tryptophan-rich sensory protein;protein_id=YP_170081.1;transl_table=11
NC_006570.2	RefSeq	gene	1116995	1118946	.	-	.	ID=gene1124;Name=betT;Dbxref=GeneID:3192499;gbkey=Gene;gene=betT;locus_tag=FTT_1107c;pseudo=true
NC_006570.2	RefSeq	gene	1119088	1119840	.	+	.	ID=gene1125;Name=FTT_1108;Dbxref=GeneID:3191249;gbkey=Gene;locus_tag=FTT_1108
NC_006570.2	RefSeq	CDS	1119088	1119840	.	+	0	ID=cds998;Name=YP_170082.1;Parent=gene1125;Note=Similar to Q891T6 23S rRNA methyltransferase %28EC 2.1.1.-%29 from Clostridium tetani %28260 aa%29. FASTA: opt: 442 Z-score: 545.7 E%28%29: 1.7e-22 Smith-Waterman score: 442%3B 34.091 identity in 264 aa overlap. ORF ftt1108;Dbxref=GOA:Q5NFW0,InterPro:IPR013123,UniProtKB%2FTrEMBL:Q5NFW0,Genbank:YP_170082.1,GeneID:3191249;gbkey=CDS;product=rRNA methyltransferase;protein_id=YP_170082.1;transl_table=11
NC_006570.2	RefSeq	gene	1119934	1120902	.	+	.	ID=gene1126;Name=FTT_1109;Dbxref=GeneID:3191246;gbkey=Gene;locus_tag=FTT_1109
NC_006570.2	RefSeq	CDS	1119934	1120902	.	+	0	ID=cds999;Name=YP_170083.1;Parent=gene1126;Note=Similar to Q8U768 Choloylglycine hydrolase family protein from Agrobacterium tumefaciens %28strain C58 %2F ATCC 33970%29 %28355 aa%29. FASTA: opt: 362 Z-score: 436.7 E%28%29: 2e-16 Smith-Waterman score: 424%3B 28.956 identity in 297 aa overlap. ORF ftt1109;Dbxref=GOA:Q5NFV9,InterPro:IPR003199,UniProtKB%2FTrEMBL:Q5NFV9,Genbank:YP_170083.1,GeneID:3191246;gbkey=CDS;product=choloylglycine hydrolase family protein;protein_id=YP_170083.1;transl_table=11
NC_006570.2	RefSeq	gene	1121067	1121420	.	+	.	ID=gene1127;Name=FTT_1110;Dbxref=GeneID:3191247;gbkey=Gene;locus_tag=FTT_1110
NC_006570.2	RefSeq	CDS	1121067	1121420	.	+	0	ID=cds1000;Name=YP_170084.1;Parent=gene1127;Note=ORF ftt1110;Dbxref=UniProtKB%2FTrEMBL:Q5NFV8,Genbank:YP_170084.1,GeneID:3191247;gbkey=CDS;product=hypothetical protein;protein_id=YP_170084.1;transl_table=11
NC_006570.2	RefSeq	repeat_region	1121421	1121439	.	+	.	ID=id148;Note=ISFtu2 19bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	gene	1121516	1122259	.	+	.	ID=gene1128;Name=isftu2;Dbxref=GeneID:3190832;gbkey=Gene;gene=isftu2;locus_tag=FTT_1111
NC_006570.2	RefSeq	CDS	1121516	1122259	.	+	0	ID=cds1001;Name=YP_170085.1;Parent=gene1128;Note=ISFtu2. Transposase%2C member of the IS5 family. Identical to Q8GM03  transposase from Francisella tularensis %28247 aa%29.;Dbxref=GOA:Q8GM03,InterPro:IPR002559,UniProtKB%2FTrEMBL:Q8GM03,Genbank:YP_170085.1,GeneID:3190832;gbkey=CDS;product=transposase;protein_id=YP_170085.1;transl_table=11
NC_006570.2	RefSeq	repeat_region	1122267	1122285	.	+	.	ID=id149;Note=ISFtu2 19bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	gene	1122307	1123185	.	-	.	ID=gene1129;Name=rpoH;Dbxref=GeneID:3191978;gbkey=Gene;gene=rpoH;locus_tag=FTT_1112c
NC_006570.2	RefSeq	CDS	1122307	1123185	.	-	0	ID=cds1002;Name=YP_170086.1;Parent=gene1129;Note=binds with the catalytic core of RNA polymerase to produce the holoenzyme%3B this sigma factor is responsible for the expression of heat shock promoters;Dbxref=GOA:Q5NFV6,InterPro:IPR014284,UniProtKB%2FTrEMBL:Q5NFV6,Genbank:YP_170086.1,GeneID:3191978;gbkey=CDS;product=RNA polymerase factor sigma-32;protein_id=YP_170086.1;transl_table=11
NC_006570.2	RefSeq	gene	1123209	1123739	.	-	.	ID=gene1130;Name=FTT_1113c;Dbxref=GeneID:3191244;gbkey=Gene;locus_tag=FTT_1113c
NC_006570.2	RefSeq	CDS	1123209	1123739	.	-	0	ID=cds1003;Name=YP_170087.1;Parent=gene1130;Note=ORF ftt1113c;Dbxref=UniProtKB%2FTrEMBL:Q5NFV5,Genbank:YP_170087.1,GeneID:3191244;gbkey=CDS;product=hypothetical protein;protein_id=YP_170087.1;transl_table=11
NC_006570.2	RefSeq	gene	1123771	1124715	.	-	.	ID=gene1131;Name=secF;Dbxref=GeneID:3191076;gbkey=Gene;gene=secF;locus_tag=FTT_1114c
NC_006570.2	RefSeq	CDS	1123771	1124715	.	-	0	ID=cds1004;Name=YP_170088.1;Parent=gene1131;Note=forms a complex with SecD and YajC%3B SecDFyajC stimulates the proton motive force-driven protein translocation%3B seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane%3B in some organisms%2C such as Bacillus subtilis%2C SecD is fused to SecF;Dbxref=GOA:Q5NFV4,InterPro:IPR005665,UniProtKB%2FTrEMBL:Q5NFV4,Genbank:YP_170088.1,GeneID:3191076;gbkey=CDS;product=preprotein translocase subunit SecF;protein_id=YP_170088.1;transl_table=11
NC_006570.2	RefSeq	gene	1124734	1126671	.	-	.	ID=gene1132;Name=secD;Dbxref=GeneID:3191719;gbkey=Gene;gene=secD;locus_tag=FTT_1115c
NC_006570.2	RefSeq	CDS	1124734	1126671	.	-	0	ID=cds1005;Name=YP_170089.1;Parent=gene1132;Note=part of the preprotein secretory system%3B when complexed with proteins SecF and YajC%2C SecDFyajC stimulates the proton motive force-driven protein translocation%2C and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane;Dbxref=GOA:Q5NFV3,InterPro:IPR005791,UniProtKB%2FTrEMBL:Q5NFV3,Genbank:YP_170089.1,GeneID:3191719;gbkey=CDS;product=preprotein translocase subunit SecD;protein_id=YP_170089.1;transl_table=11
NC_006570.2	RefSeq	gene	1126728	1127084	.	-	.	ID=gene1133;Name=yajC;Dbxref=GeneID:3192124;gbkey=Gene;gene=yajC;locus_tag=FTT_1116c
NC_006570.2	RefSeq	CDS	1126728	1127084	.	-	0	ID=cds1006;Name=YP_170090.1;Parent=gene1133;Note=Similar to Q8XFR4 %28Q8XFR4%29  membrane protein %28Preprotein translocase IISP family%2C membrane subunit%29 from Salmonella typhi %28110 aa%29. FASTA: opt: 347 Z-score: 458.8 E%28%29: 1.2e-17 Smith-Waterman score: 347%3B 47.664 identity in 107 aa overlap.;Dbxref=InterPro:IPR003849,UniProtKB%2FTrEMBL:Q5NFV2,Genbank:YP_170090.1,GeneID:3192124;gbkey=CDS;product=preprotein translocase family protein;protein_id=YP_170090.1;transl_table=11
NC_006570.2	RefSeq	gene	1127638	1128210	.	-	.	ID=gene1134;Name=FTT_1117c;Dbxref=GeneID:3191243;gbkey=Gene;locus_tag=FTT_1117c
NC_006570.2	RefSeq	CDS	1127638	1128210	.	-	0	ID=cds1007;Name=YP_170091.1;Parent=gene1134;Note=Similar to Q9HZE2 Hypothetical protein PA3066 from Pseudomonas aeruginosa %28190 aa%29. FASTA: opt: 359 Z-score: 477.3 E%28%29: 1.1e-18 Smith-Waterman score: 359%3B 35.638 identity in 188 aa overlap. ORF ftt1117c;Dbxref=GOA:Q5NFV1,InterPro:IPR000868,UniProtKB%2FTrEMBL:Q5NFV1,Genbank:YP_170091.1,GeneID:3191243;gbkey=CDS;product=isochorismatase hydrolase family protein;protein_id=YP_170091.1;transl_table=11
NC_006570.2	RefSeq	gene	1128222	1129097	.	-	.	ID=gene1135;Name=FTT_1118c;Dbxref=GeneID:3191233;gbkey=Gene;locus_tag=FTT_1118c
NC_006570.2	RefSeq	CDS	1128222	1129097	.	-	0	ID=cds1008;Name=YP_170092.1;Parent=gene1135;Note=Similar to Q9KKY7 Hypothetical protein VCA0963 from Vibrio cholerae %28307 aa%29. FASTA: opt: 340 Z-score: 385.2 E%28%29: 1.5e-13 Smith-Waterman score: 340%3B 22.603 identity in 292 aa overlap. ORF ftt1118c;Dbxref=GOA:Q5NFV0,InterPro:IPR000620,UniProtKB%2FTrEMBL:Q5NFV0,Genbank:YP_170092.1,GeneID:3191233;gbkey=CDS;product=hypothetical protein;protein_id=YP_170092.1;transl_table=11
NC_006570.2	RefSeq	gene	1129202	1130077	.	+	.	ID=gene1136;Name=FTT_1119;Dbxref=GeneID:3191673;gbkey=Gene;locus_tag=FTT_1119
NC_006570.2	RefSeq	CDS	1129202	1130077	.	+	0	ID=cds1009;Name=YP_170093.1;Parent=gene1136;Note=Similar to Q8D460 Transcriptional regulator from Vibrio vulnificus %28296 aa%29. FASTA: opt: 459 Z-score: 575.9 E%28%29: 3.5e-24 Smith-Waterman score: 459%3B 29.197 identity in 274 aa overlap. ORF ftt1119;Dbxref=GOA:Q5NFU9,InterPro:IPR011991,UniProtKB%2FTrEMBL:Q5NFU9,Genbank:YP_170093.1,GeneID:3191673;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=YP_170093.1;transl_table=11
NC_006570.2	RefSeq	gene	1130084	1131187	.	-	.	ID=gene1137;Name=tgt;Dbxref=GeneID:3190761;gbkey=Gene;gene=tgt;locus_tag=FTT_1120c
NC_006570.2	RefSeq	CDS	1130084	1131187	.	-	0	ID=cds1010;Name=YP_170094.1;Parent=gene1137;Note=Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU%28N%29 anticodons %28tRNA-Asp%2C -Asn%2C -His and -Tyr%29;Dbxref=GOA:Q5NFU8,InterPro:IPR004803,UniProtKB%2FSwiss-Prot:Q5NFU8,Genbank:YP_170094.1,GeneID:3190761;gbkey=CDS;product=queuine tRNA-ribosyltransferase;protein_id=YP_170094.1;transl_table=11
NC_006570.2	RefSeq	repeat_region	1131451	1131459	.	+	.	ID=id150;Note=9 bp terminal inverse repeat;gbkey=repeat_region
NC_006570.2	RefSeq	gene	1131492	1131789	.	+	.	ID=gene1138;Name=FTT_1121;Dbxref=GeneID:3191674;gbkey=Gene;locus_tag=FTT_1121;pseudo=true
NC_006570.2	RefSeq	repeat_region	1131800	1131808	.	+	.	ID=id151;Note=9 bp terminal inverse repeat;gbkey=repeat_region
NC_006570.2	RefSeq	gene	1132161	1132631	.	-	.	ID=gene1139;Name=FTT_1122c;Dbxref=GeneID:3191672;gbkey=Gene;locus_tag=FTT_1122c
NC_006570.2	RefSeq	CDS	1132161	1132631	.	-	0	ID=cds1011;Name=YP_170095.1;Parent=gene1139;Note=ORF ftt1122c;Dbxref=UniProtKB%2FTrEMBL:Q5NFU7,Genbank:YP_170095.1,GeneID:3191672;gbkey=CDS;product=lipoprotein;protein_id=YP_170095.1;transl_table=11
NC_006570.2	RefSeq	gene	1133213	1133827	.	+	.	ID=gene1140;Name=ygiH;Dbxref=GeneID:3191266;gbkey=Gene;gene=ygiH;locus_tag=FTT_1123
NC_006570.2	RefSeq	CDS	1133213	1133827	.	+	0	ID=cds1012;Name=YP_170096.1;Parent=gene1140;Note=Similar to Y647_YERPE %28Q8ZI67%29 Hypothetical UPF0078 protein YPO0647%2FY3532 %28216 aa%29. FASTA: opt: 604 Z-score: 713.6 E%28%29: 7.4e-32 Smith-Waterman score: 604%3B 48.500 identity in 200 aa overlap.;Dbxref=GOA:Q5NFU6,InterPro:IPR003811,UniProtKB%2FSwiss-Prot:Q5NFU6,Genbank:YP_170096.1,GeneID:3191266;gbkey=CDS;product=hypothetical protein;protein_id=YP_170096.1;transl_table=11
NC_006570.2	RefSeq	gene	1133790	1134866	.	+	.	ID=gene1141;Name=metN;Dbxref=GeneID:3190821;gbkey=Gene;gene=metN;locus_tag=FTT_1124
NC_006570.2	RefSeq	CDS	1133790	1134866	.	+	0	ID=cds1013;Name=YP_170097.1;Parent=gene1141;Note=Similar to AAP15732 ATP-binding component of a transporter from Shigella flexneri %28343 aa%29. FASTA: opt: 1070 Z-score: 1232.1 E%28%29: 9.7e-61 Smith-Waterman score: 1070%3B 46.221 identity in 344 aa overlap.;Dbxref=GOA:Q5NFU5,InterPro:IPR018449,UniProtKB%2FSwiss-Prot:Q5NFU5,Genbank:YP_170097.1,GeneID:3190821;gbkey=CDS;product=D-methionine transport protein%2C ABC transporter%2CATP-binding subunit;protein_id=YP_170097.1;transl_table=11
NC_006570.2	RefSeq	gene	1134844	1136316	.	+	.	ID=gene1142;Name=metIQ;Dbxref=GeneID:3190931;gbkey=Gene;gene=metIQ;locus_tag=FTT_1125
NC_006570.2	RefSeq	CDS	1134844	1136316	.	+	0	ID=cds1014;Name=YP_170098.1;Parent=gene1142;Note=Similar to METQ_SALTI %28Q8Z992%29 D-methionine-binding lipoprotein metQ %5BPrecursor%5D from Salmonella typhi %28271 aa%29. FASTA: opt: 815 Z-score: 926.6 E%28%29: 1e-43 Smith-Waterman score: 815%3B 51.020identity in 245 aa overlap. The FASTA-hits do not include the first 220 aa. Probably two genes%2C metI and metQ%2C in other organisms.;Dbxref=GOA:Q5NFU4,InterPro:IPR004872,UniProtKB%2FTrEMBL:Q5NFU4,Genbank:YP_170098.1,GeneID:3190931;gbkey=CDS;product=D-methionine binding transport protein%2C ABC transporter%2C membrane and periplasmic protein;protein_id=YP_170098.1;transl_table=11
NC_006570.2	RefSeq	gene	1136387	1137598	.	+	.	ID=gene1143;Name=FTT_1126;Dbxref=GeneID:3191671;gbkey=Gene;locus_tag=FTT_1126
NC_006570.2	RefSeq	CDS	1136387	1137598	.	+	0	ID=cds1015;Name=YP_170099.1;Parent=gene1143;Note=Similar to Q83BG9 Tryptophan%2Ftyrosine permease family protein from Coxiella burnetii %28426 aa%29. FASTA: opt: 560 Z-score: 604.8 E%28%29: 8.5e-26 Smith-Waterman score: 560%3B 27.750identity in 400 aa overlap. ORF ftt1126;Dbxref=GOA:Q5NFU3,InterPro:IPR018227,UniProtKB%2FTrEMBL:Q5NFU3,Genbank:YP_170099.1,GeneID:3191671;gbkey=CDS;product=aromatic amino acid HAAP transporter;protein_id=YP_170099.1;transl_table=11
NC_006570.2	RefSeq	gene	1137664	1138422	.	+	.	ID=gene1144;Name=FTT_1127;Dbxref=GeneID:3192171;gbkey=Gene;locus_tag=FTT_1127
NC_006570.2	RefSeq	CDS	1137664	1138422	.	+	0	ID=cds1016;Name=YP_170100.1;Parent=gene1144;Note=Similar to Q83F83 Rhodanese domain protein from Coxiella burnetii %28124 aa%29. FASTA: opt: 447 Z-score: 559.4 E%28%29: 2.9e-23 Smith-Waterman score: 447%3B 51.240 identity in 121 aa overlap. ORF ftt1127;Dbxref=InterPro:IPR001763,UniProtKB%2FTrEMBL:Q5NFU2,Genbank:YP_170100.1,GeneID:3192171;gbkey=CDS;product=rhodanese-like family protein;protein_id=YP_170100.1;transl_table=11
NC_006570.2	RefSeq	gene	1138435	1138914	.	+	.	ID=gene1145;Name=ispF;Dbxref=GeneID:3190836;gbkey=Gene;gene=ispF;locus_tag=FTT_1128
NC_006570.2	RefSeq	CDS	1138435	1138914	.	+	0	ID=cds1017;Name=YP_170101.1;Parent=gene1145;Note=catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate;Dbxref=GOA:Q5NFU1,InterPro:IPR003526,UniProtKB%2FSwiss-Prot:Q5NFU1,Genbank:YP_170101.1,GeneID:3190836;gbkey=CDS;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=YP_170101.1;transl_table=11
NC_006570.2	RefSeq	gene	1138919	1140604	.	-	.	ID=gene1146;Name=FTT_1129c;Dbxref=GeneID:3191730;gbkey=Gene;locus_tag=FTT_1129c
NC_006570.2	RefSeq	CDS	1138919	1140604	.	-	0	ID=cds1018;Name=YP_170102.1;Parent=gene1146;Note=Similar to CPHA_ANAVA %28O86109%29 Cyanophycin synthetase from Anabaena variabilis %28901 aa%29. FASTA: opt: 2470 Z-score: 2850.7 E%28%29: 6.8e-151 Smith-Waterman score: 2506%3B 46.787 identity in 887 aa overlap. Probable paralog of cphA since the protein sequences show considerable divergence and gene length differ. ORF ftt1129c;Dbxref=GOA:Q5NFU0,InterPro:IPR013221,UniProtKB%2FTrEMBL:Q5NFU0,Genbank:YP_170102.1,GeneID:3191730;gbkey=CDS;product=hypothetical protein;protein_id=YP_170102.1;transl_table=11
NC_006570.2	RefSeq	gene	1140630	1143452	.	-	.	ID=gene1147;Name=cphA;Dbxref=GeneID:3191888;gbkey=Gene;gene=cphA;locus_tag=FTT_1130c
NC_006570.2	RefSeq	CDS	1140630	1143452	.	-	0	ID=cds1019;Name=YP_170103.1;Parent=gene1147;Note=catalyze the formation of cyanophycin which may act to store excess nitrogen;Dbxref=GOA:Q5NFT9,InterPro:IPR013815,UniProtKB%2FTrEMBL:Q5NFT9,Genbank:YP_170103.1,GeneID:3191888;gbkey=CDS;product=cyanophycin synthetase;protein_id=YP_170103.1;transl_table=11
NC_006570.2	RefSeq	gene	1143576	1144319	.	+	.	ID=gene1148;Name=FTT_1131;Dbxref=GeneID:3191441;gbkey=Gene;locus_tag=FTT_1131;pseudo=true
NC_006570.2	RefSeq	gene	1144308	1145060	.	-	.	ID=gene1149;Name=glpQ;Dbxref=GeneID:3190955;gbkey=Gene;gene=glpQ;locus_tag=FTT_1132c
NC_006570.2	RefSeq	CDS	1144308	1145060	.	-	0	ID=cds1020;Name=YP_170104.1;Parent=gene1149;Note=Similar to Q83DQ4 Glycerophosphoryl diester phosphodiesterase%2C %28250 aa%29. FASTA: opt: 306 Z-score: 366.0 E%28%29: 1.7e-12 Smith-Waterman score: 306%3B 28.916identity in 249 aa overlap.;Dbxref=GOA:Q5NFT8,InterPro:IPR017946,UniProtKB%2FTrEMBL:Q5NFT8,Genbank:YP_170104.1,GeneID:3190955;gbkey=CDS;product=glycerophosphoryl diester phosphodiesterase;protein_id=YP_170104.1;transl_table=11
NC_006570.2	RefSeq	gene	1145219	1146997	.	+	.	ID=gene1150;Name=pilB;Dbxref=GeneID:3191922;gbkey=Gene;gene=pilB;locus_tag=FTT_1133
NC_006570.2	RefSeq	CDS	1145219	1146997	.	+	0	ID=cds1021;Name=YP_170105.1;Parent=gene1150;Note=Similar to O68431 Pilus assembly protein PilB from Pseudomonas syringae %28pv. tomato%29 %28575 aa%29. FASTA: opt: 1381 Z-score: 1521.6 E%28%29: 7.3e-77 Smith-Waterman score: 1592%3B 44.597 identity in 583 aa overlap. PilB is required for pili assembly. Homologous to pilT but which has the opposite effect. Homologs exists in other systems.;Dbxref=GOA:Q5NFT7,InterPro:IPR017871,UniProtKB%2FTrEMBL:Q5NFT7,Genbank:YP_170105.1,GeneID:3191922;gbkey=CDS;product=Type IV pili nucleotide binding protein%2C ABC transporter ATP-binding protein;protein_id=YP_170105.1;transl_table=11
NC_006570.2	RefSeq	gene	1147012	1148241	.	+	.	ID=gene1151;Name=pilC;Dbxref=GeneID:3192189;gbkey=Gene;gene=pilC;locus_tag=FTT_1134
NC_006570.2	RefSeq	CDS	1147012	1148241	.	+	0	ID=cds1022;Name=YP_170106.1;Parent=gene1151;Note=Similar to Q888U1 Type IV pilus biogenesis protein PilC from Pseudomonas syringae %28pv. tomato%29 %28405 aa%29. FASTA: opt: 1017 Z-score: 1153.2 E%28%29: 2.4e-56 Smith-Waterman score: 1017%3B 39.055identity in 402 aa overlap. Termed pilF in N. gonorrhoeae.;Dbxref=GOA:Q5NFT6,InterPro:IPR018076,UniProtKB%2FTrEMBL:Q5NFT6,Genbank:YP_170106.1,GeneID:3192189;gbkey=CDS;product=Type IV pili polytopic inner membrane protein;protein_id=YP_170106.1;transl_table=11
NC_006570.2	RefSeq	gene	1148315	1149467	.	-	.	ID=gene1152;Name=FTT_1135c;Dbxref=GeneID:3191670;gbkey=Gene;locus_tag=FTT_1135c;pseudo=true
NC_006570.2	RefSeq	gene	1149485	1149820	.	-	.	ID=gene1153;Name=FTT_1136c;Dbxref=GeneID:3191658;gbkey=Gene;locus_tag=FTT_1136c
NC_006570.2	RefSeq	CDS	1149485	1149820	.	-	0	ID=cds1023;Name=YP_170107.1;Parent=gene1153;Note=ORF ftt1136c;Dbxref=UniProtKB%2FTrEMBL:Q5NFT5,Genbank:YP_170107.1,GeneID:3191658;gbkey=CDS;product=hypothetical protein;protein_id=YP_170107.1;transl_table=11
NC_006570.2	RefSeq	gene	1149837	1150097	.	-	.	ID=gene1154;Name=FTT_1137c;Dbxref=GeneID:3191825;gbkey=Gene;locus_tag=FTT_1137c
NC_006570.2	RefSeq	CDS	1149837	1150097	.	-	0	ID=cds1024;Name=YP_170108.1;Parent=gene1154;Note=ORF ftt1137c;Dbxref=UniProtKB%2FTrEMBL:Q5NFT4,Genbank:YP_170108.1,GeneID:3191825;gbkey=CDS;product=hypothetical protein;protein_id=YP_170108.1;transl_table=11
NC_006570.2	RefSeq	gene	1150231	1151232	.	+	.	ID=gene1155;Name=hemH;Dbxref=GeneID:3192420;gbkey=Gene;gene=hemH;locus_tag=FTT_1138
NC_006570.2	RefSeq	CDS	1150231	1151232	.	+	0	ID=cds1025;Name=YP_170109.1;Parent=gene1155;Note=Similar to HEMZ_RHIME %28Q92M52%29 Ferrochelatase %28EC 4.99.1.1%29 from Rhizobium meliloti %28Sinorhizobium meliloti%29 %28339 aa%29. FASTA: opt: 1069 Z-score: 1243.4 E%28%29: 2.3e-61 Smith-Waterman score: 1069%3B 48.160 identity in 326 aa overlap.;Dbxref=GOA:Q5NFT3,InterPro:IPR019772,UniProtKB%2FSwiss-Prot:Q5NFT3,Genbank:YP_170109.1,GeneID:3192420;gbkey=CDS;product=ferrochelatase;protein_id=YP_170109.1;transl_table=11
NC_006570.2	RefSeq	gene	1151217	1152612	.	+	.	ID=gene1156;Name=phrB;Dbxref=GeneID:3190710;gbkey=Gene;gene=phrB;locus_tag=FTT_1139;pseudo=true
NC_006570.2	RefSeq	gene	1153449	1153646	.	+	.	ID=gene1157;Name=FTT_1140;Dbxref=GeneID:3191969;gbkey=Gene;locus_tag=FTT_1140
NC_006570.2	RefSeq	CDS	1153449	1153646	.	+	0	ID=cds1026;Name=YP_170110.1;Parent=gene1157;Note=ORF ftt1140;Dbxref=UniProtKB%2FTrEMBL:Q5NFT2,Genbank:YP_170110.1,GeneID:3191969;gbkey=CDS;product=hypothetical protein;protein_id=YP_170110.1;transl_table=11
NC_006570.2	RefSeq	gene	1153701	1154956	.	+	.	ID=gene1158;Name=FTT_1141;Dbxref=GeneID:3191966;gbkey=Gene;locus_tag=FTT_1141;pseudo=true
NC_006570.2	RefSeq	repeat_region	1153801	1153812	.	-	.	ID=id152;Note=ISFtu1 12bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	gene	1153900	1154684	.	-	.	ID=gene1159;Name=isftu1;Dbxref=GeneID:3191798;gbkey=Gene;gene=isftu1;locus_tag=FTT_1142c
NC_006570.2	RefSeq	CDS	1154358	1154684	.	-	0	ID=cds1027;Name=YP_170111.1;Parent=gene1159;Note=ISFtu1. Transposase%2C member of the IS630 Tc-1 mariner family. Identical to Q93EJ6  transposase from Francisella tularensis %28118 aa%29 from aa 144-261. Identical to Q93EJ7  transposase from Francisella tularensis %28126 aa%29 from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF%27s. ORF1 %28identical to Q93EJ7%29 contains a programmed ribosomal frameshifting motif%2C 5%27-AAAAAAAG-3%27 at aa position 109 which permits frameshifting to ORF2 %28identical to Q93EJ6%29 to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family%2C and also mariner elements%2C show that this transposase shares strongly conserved residues%2C including a fully conserved dipeptide%2CAsp-Glu %28DE%29%2C and a block consisting of a fully conserved Asp and highly conserved Glu%2C separated by 34 or 35 residues %28D35E%29. The conserved dipeptide is only present if ribosomal frameshifting occurs.;Dbxref=UniProtKB%2FTrEMBL:Q5NIH2,Genbank:YP_170111.1,GeneID:3191798;gbkey=CDS;product=transposase;protein_id=YP_170111.1;transl_table=11
NC_006570.2	RefSeq	CDS	1153900	1154358	.	-	0	ID=cds1027;Name=YP_170111.1;Parent=gene1159;Note=ISFtu1. Transposase%2C member of the IS630 Tc-1 mariner family. Identical to Q93EJ6  transposase from Francisella tularensis %28118 aa%29 from aa 144-261. Identical to Q93EJ7  transposase from Francisella tularensis %28126 aa%29 from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF%27s. ORF1 %28identical to Q93EJ7%29 contains a programmed ribosomal frameshifting motif%2C 5%27-AAAAAAAG-3%27 at aa position 109 which permits frameshifting to ORF2 %28identical to Q93EJ6%29 to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family%2C and also mariner elements%2C show that this transposase shares strongly conserved residues%2C including a fully conserved dipeptide%2CAsp-Glu %28DE%29%2C and a block consisting of a fully conserved Asp and highly conserved Glu%2C separated by 34 or 35 residues %28D35E%29. The conserved dipeptide is only present if ribosomal frameshifting occurs.;Dbxref=UniProtKB%2FTrEMBL:Q5NIH2,Genbank:YP_170111.1,GeneID:3191798;gbkey=CDS;product=transposase;protein_id=YP_170111.1;transl_table=11
NC_006570.2	RefSeq	repeat_region	1154705	1154720	.	-	.	ID=id153;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	1154721	1154736	.	-	.	ID=id154;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	1154737	1154748	.	-	.	ID=id155;Note=ISFtu1 12bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	gene	1155021	1155266	.	+	.	ID=gene1160;Name=FTT_1143;Dbxref=GeneID:3191981;gbkey=Gene;locus_tag=FTT_1143
NC_006570.2	RefSeq	CDS	1155021	1155266	.	+	0	ID=cds1028;Name=YP_170112.1;Parent=gene1160;Note=ORF ftt1143;Dbxref=UniProtKB%2FTrEMBL:Q5NFT0,Genbank:YP_170112.1,GeneID:3191981;gbkey=CDS;product=hypothetical protein;protein_id=YP_170112.1;transl_table=11
NC_006570.2	RefSeq	gene	1155451	1156310	.	+	.	ID=gene1161;Name=FTT_1144;Dbxref=GeneID:3191839;gbkey=Gene;locus_tag=FTT_1144;pseudo=true
NC_006570.2	RefSeq	gene	1156322	1156528	.	+	.	ID=gene1162;Name=chaB;Dbxref=GeneID:3192345;gbkey=Gene;gene=chaB;locus_tag=FTT_1145
NC_006570.2	RefSeq	CDS	1156322	1156528	.	+	0	ID=cds1029;Name=YP_170113.1;Parent=gene1162;Note=Similar to Q8XGJ2 Cation transport regulator ChaB from Salmonella typhi %2876 aa%29. FASTA: opt: 267 Z-score: 394.9 E%28%29: 4.2e-14 Smith-Waterman score: 267%3B 54.412 identity in 68 aa overlap.;Dbxref=InterPro:IPR009317,UniProtKB%2FTrEMBL:Q5NFS9,Genbank:YP_170113.1,GeneID:3192345;gbkey=CDS;product=cation transport regulator;protein_id=YP_170113.1;transl_table=11
NC_006570.2	RefSeq	gene	1156661	1157639	.	-	.	ID=gene1163;Name=galM;Dbxref=GeneID:3192370;gbkey=Gene;gene=galM;locus_tag=FTT_1146c;pseudo=true
NC_006570.2	RefSeq	gene	1157636	1158811	.	-	.	ID=gene1164;Name=dfp;Dbxref=GeneID:3191519;gbkey=Gene;gene=dfp;locus_tag=FTT_1147c
NC_006570.2	RefSeq	CDS	1157636	1158811	.	-	0	ID=cds1030;Name=YP_170114.1;Parent=gene1164;Note=Similar to DFP_HAEIN %28P44953%29 DNA%2Fpantothenate metabolism flavoprotein homolog from Haemophilus influenzae %28400 aa%29. FASTA: opt: 1012 Z-score: 1206.6 E%28%29: 2.6e-59 Smith-Waterman score: 1012%3B 43.577identity in 397 aa overlap.;Dbxref=GOA:Q5NFS8,InterPro:IPR007085,UniProtKB%2FTrEMBL:Q5NFS8,Genbank:YP_170114.1,GeneID:3191519;gbkey=CDS;product=4%27-phosphopantothenoylcysteine decarboxylase;protein_id=YP_170114.1;transl_table=11
NC_006570.2	RefSeq	gene	1158824	1160008	.	-	.	ID=gene1165;Name=yjhB;Dbxref=GeneID:3192394;gbkey=Gene;gene=yjhB;locus_tag=FTT_1148c
NC_006570.2	RefSeq	CDS	1158824	1160008	.	-	0	ID=cds1031;Name=YP_170115.1;Parent=gene1165;Note=Similar to YJHB_ECOLI %28P39352%29 Hypothetical metabolite transport protein yjhB from Escherichia coli %28405 aa%29. FASTA: opt: 383 Z-score: 393.4 E%28%29: 5.1e-14 Smith-Waterman score: 383%3B 26.425 identity in 386 aa overlap.;Dbxref=InterPro:IPR011701,UniProtKB%2FTrEMBL:Q5NFS7,Genbank:YP_170115.1,GeneID:3192394;gbkey=CDS;product=major facilitator transporter;protein_id=YP_170115.1;transl_table=11
NC_006570.2	RefSeq	gene	1160084	1161592	.	-	.	ID=gene1166;Name=FTT_1149c;Dbxref=GeneID:3191748;gbkey=Gene;locus_tag=FTT_1149c
NC_006570.2	RefSeq	CDS	1160084	1161592	.	-	0	ID=cds1032;Name=YP_170116.1;Parent=gene1166;Note=Similar to Q8XT33 Probable amino-acid permease transmembrane from Ralstonia solanacearum %28Pseudomonas solanacearum%29 %28543 aa%29. FASTA: opt: 960 Z-score: 1077.6 E%28%29: 3.9e-52 Smith-Waterman score: 969%3B 35.730 identity in 445 aa overlap. ORF ftt1149c;Dbxref=GOA:Q5NFS6,InterPro:IPR004841,UniProtKB%2FTrEMBL:Q5NFS6,Genbank:YP_170116.1,GeneID:3191748;gbkey=CDS;product=amino acid transporter family protein;protein_id=YP_170116.1;transl_table=11
NC_006570.2	RefSeq	gene	1161752	1165825	.	-	.	ID=gene1167;Name=putA;Dbxref=GeneID:3191660;gbkey=Gene;gene=putA;locus_tag=FTT_1150c
NC_006570.2	RefSeq	CDS	1161752	1165825	.	-	0	ID=cds1033;Name=YP_170117.1;Parent=gene1167;Note=proline utilization protein A%3B multifunctional protein that functions in proline catabolism in the first two enzymatic steps resulting in the conversion of proline to glutamate%3B in Escherichia coli this protein self regulates transcription via a DNA-binding domain at the N-terminus but the protein from Pseudomonas does not have this domain;Dbxref=GOA:Q5NFS5,InterPro:IPR016162,UniProtKB%2FTrEMBL:Q5NFS5,Genbank:YP_170117.1,GeneID:3191660;gbkey=CDS;product=bifunctional proline dehydrogenase%2Fpyrroline-5-carboxylate dehydrogenase;protein_id=YP_170117.1;transl_table=11
NC_006570.2	RefSeq	gene	1165833	1166120	.	-	.	ID=gene1168;Name=FTT_1151c;Dbxref=GeneID:3191681;gbkey=Gene;locus_tag=FTT_1151c
NC_006570.2	RefSeq	CDS	1165833	1166120	.	-	0	ID=cds1034;Name=YP_170118.1;Parent=gene1168;Note=Similar to Q87LM9 Conserved hypothetical protein from Vibrio parahaemolyticus %2886 aa%29. FASTA: opt: 176 Z-score: 242.1 E%28%29: 1.4e-05 Smith-Waterman score: 176%3B 32.857 identity in 70 aa overlap. ORF ftt1151c;Dbxref=InterPro:IPR005631,UniProtKB%2FSwiss-Prot:Q5NFS4,Genbank:YP_170118.1,GeneID:3191681;gbkey=CDS;product=hypothetical protein;protein_id=YP_170118.1;transl_table=11
NC_006570.2	RefSeq	gene	1166334	1166717	.	+	.	ID=gene1169;Name=FTT_1152;Dbxref=GeneID:3192179;gbkey=Gene;locus_tag=FTT_1152
NC_006570.2	RefSeq	CDS	1166334	1166717	.	+	0	ID=cds1035;Name=YP_170119.1;Parent=gene1169;Note=ORF ftt1152;Dbxref=UniProtKB%2FTrEMBL:Q5NFS3,Genbank:YP_170119.1,GeneID:3192179;gbkey=CDS;product=hypothetical protein;protein_id=YP_170119.1;transl_table=11
NC_006570.2	RefSeq	gene	1166784	1167008	.	-	.	ID=gene1170;Name=FTT_1153c;Dbxref=GeneID:3192176;gbkey=Gene;locus_tag=FTT_1153c
NC_006570.2	RefSeq	CDS	1166784	1167008	.	-	0	ID=cds1036;Name=YP_170120.1;Parent=gene1170;Note=ORF ftt1153c;Dbxref=UniProtKB%2FTrEMBL:Q5NFS2,Genbank:YP_170120.1,GeneID:3192176;gbkey=CDS;product=hypothetical protein;protein_id=YP_170120.1;transl_table=11
NC_006570.2	RefSeq	gene	1167066	1168145	.	-	.	ID=gene1171;Name=aroB;Dbxref=GeneID:3190946;gbkey=Gene;gene=aroB;locus_tag=FTT_1154c
NC_006570.2	RefSeq	CDS	1167066	1168145	.	-	0	ID=cds1037;Name=YP_170121.1;Parent=gene1171;Note=catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate%3B functions in aromatic amino acid biosynthesis;Dbxref=GOA:Q5NFS1,InterPro:IPR016303,UniProtKB%2FSwiss-Prot:Q5NFS1,Genbank:YP_170121.1,GeneID:3190946;gbkey=CDS;product=3-dehydroquinate synthase;protein_id=YP_170121.1;transl_table=11
NC_006570.2	RefSeq	gene	1168142	1168672	.	-	.	ID=gene1172;Name=aroK;Dbxref=GeneID:3192541;gbkey=Gene;gene=aroK;locus_tag=FTT_1155c
NC_006570.2	RefSeq	CDS	1168142	1168672	.	-	0	ID=cds1038;Name=YP_170122.1;Parent=gene1172;Note=type I enzyme similar to type II but differentially regulated%3B major shikimate kinase in fully repressed cells%3B catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis;Dbxref=GOA:Q5NFS0,InterPro:IPR003593,UniProtKB%2FSwiss-Prot:Q5NFS0,Genbank:YP_170122.1,GeneID:3192541;gbkey=CDS;product=shikimate kinase I;protein_id=YP_170122.1;transl_table=11
NC_006570.2	RefSeq	gene	1168798	1170582	.	-	.	ID=gene1173;Name=pilQ;Dbxref=GeneID:3191514;gbkey=Gene;gene=pilQ;locus_tag=FTT_1156c
NC_006570.2	RefSeq	CDS	1168798	1170582	.	-	0	ID=cds1039;Name=YP_170123.1;Parent=gene1173;Note=Similar to Q8EK21 Type IV pilus biogenesis protein PilQ from Shewanella oneidensis %28684 aa%29. FASTA: opt: 1014 Z-score: 1145.2 E%28%29: 6.8e-56 Smith-Waterman score: 1014%3B 31.658 identity in 597 aa overlap. The nearest gene neighbours show similarity to pilN%2C pilO and pilP. Also required for type II protein secretion.;Dbxref=GOA:Q5NFR9,InterPro:IPR013355,UniProtKB%2FTrEMBL:Q5NFR9,Genbank:YP_170123.1,GeneID:3191514;gbkey=CDS;product=Type IV pilin multimeric outer membrane protein;protein_id=YP_170123.1;transl_table=11
NC_006570.2	RefSeq	gene	1170595	1171185	.	-	.	ID=gene1174;Name=FTT_1157c;Dbxref=GeneID:3191399;gbkey=Gene;locus_tag=FTT_1157c
NC_006570.2	RefSeq	CDS	1170595	1171185	.	-	0	ID=cds1040;Name=YP_170124.1;Parent=gene1174;Note=Similar to Q8DCM3 Tfp pilus assembly protein PilP from Vibrio vulnificus %28170 aa%29. FASTA: opt: 176 Z-score: 222.1 E%28%29: 0.00018 Smith-Waterman score: 176%3B 29.921 identity in 127 aa overlap. Weak similarity to the lipoprotein pilP%2C which appears to be required for stabilisation of pilQ multimer formation. The nearest gene neighbours show similarity to pilN%2C pilO and pilQ%2C which indicates that this protein could be pilP ORF ftt1157c;Dbxref=UniProtKB%2FTrEMBL:Q5NFR8,Genbank:YP_170124.1,GeneID:3191399;gbkey=CDS;product=Type IV pili lipoprotein;protein_id=YP_170124.1;transl_table=11
NC_006570.2	RefSeq	gene	1171191	1171787	.	-	.	ID=gene1175;Name=FTT_1158c;Dbxref=GeneID:3191034;gbkey=Gene;locus_tag=FTT_1158c
NC_006570.2	RefSeq	CDS	1171191	1171787	.	-	0	ID=cds1041;Name=YP_170125.1;Parent=gene1175;Note=Similar to Q8PH76 Fimbrial assembly membrane protein from Xanthomonas axonopodis %28pv. citri%29 %28221 aa%29. FASTA: opt: 144 Z-score: 177.4 E%28%29: 0.055 Smith-Waterman score: 144%3B 25.946 identity in 185 aa overlap. Weak similarity to type IV pili glycosylation protein %28pilO%29. The nearest gene neighbours show similarity to pilN%2C pilP and pilQ%2C which indicates that this protein could be pilO. PilO is required for glycosylation of Pseudomonas aeruginosa pilin. ORF ftt1158c;Dbxref=UniProtKB%2FTrEMBL:Q5NFR7,Genbank:YP_170125.1,GeneID:3191034;gbkey=CDS;product=Type IV pili glycosylation protein;protein_id=YP_170125.1;transl_table=11
NC_006570.2	RefSeq	gene	1171781	1172344	.	-	.	ID=gene1176;Name=FTT_1159c;Dbxref=GeneID:3191614;gbkey=Gene;locus_tag=FTT_1159c
NC_006570.2	RefSeq	CDS	1171781	1172344	.	-	0	ID=cds1042;Name=YP_170126.1;Parent=gene1176;Note=Similar to Q52540 Membrane protein PilN from Pseudomonas syringae %28199 aa%29. FASTA: opt: 143 Z-score: 182.6 E%28%29: 0.028 Smith-Waterman score: 143%3B 23.704 identity in 135 aa overlap. The nearest gene neighbours show similarity to pilO%2C pilP and pilQ%2C which indicates that this protein could be pilN. PilN is also required for type II protein secretion. ORF ftt1159c;Dbxref=InterPro:IPR007813,UniProtKB%2FTrEMBL:Q5NFR6,Genbank:YP_170126.1,GeneID:3191614;gbkey=CDS;product=Type IV pili associated protein;protein_id=YP_170126.1;transl_table=11
NC_006570.2	RefSeq	gene	1172346	1173350	.	-	.	ID=gene1177;Name=FTT_1160c;Dbxref=GeneID:3192170;gbkey=Gene;locus_tag=FTT_1160c
NC_006570.2	RefSeq	CDS	1172346	1173350	.	-	0	ID=cds1043;Name=YP_170127.1;Parent=gene1177;Note=ORF ftt1160c;Dbxref=UniProtKB%2FTrEMBL:Q5NFR5,Genbank:YP_170127.1,GeneID:3192170;gbkey=CDS;product=hypothetical protein;protein_id=YP_170127.1;transl_table=11
NC_006570.2	RefSeq	gene	1173477	1174133	.	+	.	ID=gene1178;Name=adk;Dbxref=GeneID:3192396;gbkey=Gene;gene=adk;locus_tag=FTT_1161
NC_006570.2	RefSeq	CDS	1173477	1174133	.	+	0	ID=cds1044;Name=YP_170128.1;Parent=gene1178;Note=essential enzyme that recycles AMP in active cells%3B converts ATP and AMP to two molecules of ADP;Dbxref=GOA:Q5NFR4,InterPro:IPR007862,UniProtKB%2FSwiss-Prot:Q5NFR4,Genbank:YP_170128.1,GeneID:3192396;gbkey=CDS;product=adenylate kinase;protein_id=YP_170128.1;transl_table=11
NC_006570.2	RefSeq	gene	1174692	1177413	.	-	.	ID=gene1179;Name=FTT_1162c;Dbxref=GeneID:3192489;gbkey=Gene;locus_tag=FTT_1162c;pseudo=true
NC_006570.2	RefSeq	gene	1177474	1177890	.	-	.	ID=gene1180;Name=FTT_1163c;Dbxref=GeneID:3192471;gbkey=Gene;locus_tag=FTT_1163c
NC_006570.2	RefSeq	CDS	1177474	1177890	.	-	0	ID=cds1045;Name=YP_170129.1;Parent=gene1180;Note=ORF ftt1163c;Dbxref=UniProtKB%2FTrEMBL:Q5NFR3,Genbank:YP_170129.1,GeneID:3192471;gbkey=CDS;product=hypothetical protein;protein_id=YP_170129.1;transl_table=11
NC_006570.2	RefSeq	gene	1177905	1178798	.	-	.	ID=gene1181;Name=era;Dbxref=GeneID:3191858;gbkey=Gene;gene=era;locus_tag=FTT_1164c
NC_006570.2	RefSeq	CDS	1177905	1178798	.	-	0	ID=cds1046;Name=YP_170130.1;Parent=gene1181;Note=Era%3B Escherichia coli Ras-like protein%3B Bex%3B Bacillus Era-complementing segment%3B essential protein in Escherichia coli that is involved in many cellular processes%3B GTPase%3B binds the cell membrane through apparent C-terminal domain%3B mutants are arrested during the cell cycle%3B Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome;Dbxref=GOA:Q5NFR2,InterPro:IPR015946,UniProtKB%2FTrEMBL:Q5NFR2,Genbank:YP_170130.1,GeneID:3191858;gbkey=CDS;product=GTP-binding protein Era;protein_id=YP_170130.1;transl_table=11
NC_006570.2	RefSeq	gene	1178912	1180105	.	-	.	ID=gene1182;Name=aspC2;Dbxref=GeneID:3192538;gbkey=Gene;gene=aspC2;locus_tag=FTT_1165c
NC_006570.2	RefSeq	CDS	1178912	1180105	.	-	0	ID=cds1047;Name=YP_170131.1;Parent=gene1182;Note=Similar to Q83E19 Aspartate aminotransferase from Coxiella burnetii %28394 aa%29. FASTA: opt: 1067 Z-score: 1292.7 E%28%29: 4.1e-64 Smith-Waterman score: 1067%3B 41.645 identity in 389 aa overlap.;Dbxref=GOA:Q5NFR1,InterPro:IPR015422,UniProtKB%2FTrEMBL:Q5NFR1,Genbank:YP_170131.1,GeneID:3192538;gbkey=CDS;product=aspartate aminotransferase;protein_id=YP_170131.1;transl_table=11
NC_006570.2	RefSeq	gene	1180115	1180921	.	-	.	ID=gene1183;Name=FTT_1166c;Dbxref=GeneID:3192326;gbkey=Gene;locus_tag=FTT_1166c
NC_006570.2	RefSeq	CDS	1180115	1180921	.	-	0	ID=cds1048;Name=YP_170132.1;Parent=gene1183;Note=Similar to Q8D5X6 Predicted glutamine amidotransferase from Vibrio vulnificus %28253 aa%29. FASTA: opt: 654 Z-score: 813.9 E%28%29: 1.9e-37 Smith-Waterman score: 654%3B 42.466identity in 219 aa overlap. ORF ftt1166c;Dbxref=GOA:Q5NFR0,InterPro:IPR017932,UniProtKB%2FTrEMBL:Q5NFR0,Genbank:YP_170132.1,GeneID:3192326;gbkey=CDS;product=glutamine amidotransferase;protein_id=YP_170132.1;transl_table=11
NC_006570.2	RefSeq	gene	1180925	1181563	.	-	.	ID=gene1184;Name=FTT_1167c;Dbxref=GeneID:3192328;gbkey=Gene;locus_tag=FTT_1167c
NC_006570.2	RefSeq	CDS	1180925	1181563	.	-	0	ID=cds1049;Name=YP_170133.1;Parent=gene1184;Note=Similar to Q8EE04 %28Q8EE04%29 Conserved hypothetical protein from Shewanella oneidensis %28236 aa%29. FASTA: opt: 349 Z-score: 425.3 E%28%29: 8.5e-16 Smith-Waterman score: 359%3B 32.273 identity in 220 aa overlap. ORF ftt1167c;Dbxref=GOA:Q5NFQ9,InterPro:IPR000905,UniProtKB%2FTrEMBL:Q5NFQ9,Genbank:YP_170133.1,GeneID:3192328;gbkey=CDS;product=glycoprotease family protein;protein_id=YP_170133.1;transl_table=11
NC_006570.2	RefSeq	gene	1181567	1182700	.	-	.	ID=gene1185;Name=nagA;Dbxref=GeneID:3192442;gbkey=Gene;gene=nagA;locus_tag=FTT_1168c
NC_006570.2	RefSeq	CDS	1181567	1182700	.	-	0	ID=cds1050;Name=YP_170134.1;Parent=gene1185;Note=Similar to Q99VS2 NagA protein %28Probable N-acetylglucosamine-6-phosphate deacetylase%29 from Staphylococcus aureus %28393 aa%29. FASTA: opt: 1006 Z-score: 1213.0 E%28%29: 1.1e-59 Smith-Waterman score: 1006%3B 43.523 identity in 386 aa overlap.;Dbxref=GOA:Q5NFQ8,InterPro:IPR006680,UniProtKB%2FTrEMBL:Q5NFQ8,Genbank:YP_170134.1,GeneID:3192442;gbkey=CDS;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=YP_170134.1;transl_table=11
NC_006570.2	RefSeq	gene	1182763	1183635	.	+	.	ID=gene1186;Name=FTT_1169;Dbxref=GeneID:3190858;gbkey=Gene;locus_tag=FTT_1169
NC_006570.2	RefSeq	CDS	1182763	1183635	.	+	0	ID=cds1051;Name=YP_170135.1;Parent=gene1186;Note=Similar to Q8EE00 GTP-binding protein %28313 aa%29. FASTA: opt: 793 Z-score: 926.5 E%28%29: 1e-43 Smith-Waterman score: 793%3B 44.218 identity in 294 aa overlap. ORF ftt1169;Dbxref=GOA:Q5NFQ7,InterPro:IPR016478,UniProtKB%2FTrEMBL:Q5NFQ7,Genbank:YP_170135.1,GeneID:3190858;gbkey=CDS;product=GTP-binding protein;protein_id=YP_170135.1;transl_table=11
NC_006570.2	RefSeq	gene	1183699	1185447	.	+	.	ID=gene1187;Name=FTT_1170;Dbxref=GeneID:3190838;gbkey=Gene;locus_tag=FTT_1170
NC_006570.2	RefSeq	CDS	1183699	1185447	.	+	0	ID=cds1052;Name=YP_170136.1;Parent=gene1187;Note=ORF ftt1170;Dbxref=GOA:Q5NFQ6,InterPro:IPR011990,UniProtKB%2FTrEMBL:Q5NFQ6,Genbank:YP_170136.1,GeneID:3190838;gbkey=CDS;product=lipoprotein;protein_id=YP_170136.1;transl_table=11
NC_006570.2	RefSeq	gene	1185437	1186903	.	-	.	ID=gene1188;Name=hsdM;Dbxref=GeneID:3190753;gbkey=Gene;gene=hsdM;locus_tag=FTT_1171c
NC_006570.2	RefSeq	CDS	1185437	1186903	.	-	0	ID=cds1053;Name=YP_170137.1;Parent=gene1188;Note=Similar to Q8RN13 HsdM from Campylobacter jejuni %28494 aa%29. FASTA: opt: 2001 Z-score: 2374.3 E%28%29: 2.3e-124 Smith-Waterman score: 2001%3B 59.719 identity in 499 aa overlap.;Dbxref=GOA:Q5NFQ5,InterPro:IPR003356,UniProtKB%2FTrEMBL:Q5NFQ5,Genbank:YP_170137.1,GeneID:3190753;gbkey=CDS;product=DNA-methyltransferase%2C type I restriction-modification enzyme subunit M;protein_id=YP_170137.1;transl_table=11
NC_006570.2	RefSeq	gene	1186890	1187321	.	-	.	ID=gene1189;Name=csp;Dbxref=GeneID:3191897;gbkey=Gene;gene=csp;locus_tag=FTT_1172c
NC_006570.2	RefSeq	CDS	1186890	1187321	.	-	0	ID=cds1054;Name=YP_170138.1;Parent=gene1189;Note=Similar to Q9HSS3 Cold shock protein from Halobacterium sp. %28strain NRC-1 %2F ATCC 700922 %2F JCM 11081%29 %2874 aa%29. FASTA: opt: 170 Z-score: 221.1 E%28%29: 0.0002 Smith-Waterman score: 170%3B 40.323identity in 62 aa overlap. CDS is longer than FASTA matches. Homology is to first 70 aa of protein only and no matches found for 2nd half of CDS;Dbxref=GOA:Q5NFQ4,InterPro:IPR012340,UniProtKB%2FTrEMBL:Q5NFQ4,Genbank:YP_170138.1,GeneID:3191897;gbkey=CDS;product=cold shock protein %28DNA-binding%29;protein_id=YP_170138.1;transl_table=11
NC_006570.2	RefSeq	gene	1187496	1188574	.	-	.	ID=gene1190;Name=hsdS;Dbxref=GeneID:3191083;gbkey=Gene;gene=hsdS;locus_tag=FTT_1173c;pseudo=true
NC_006570.2	RefSeq	gene	1188833	1189042	.	-	.	ID=gene1191;Name=FTT_1174c;Dbxref=GeneID:3192318;gbkey=Gene;locus_tag=FTT_1174c
NC_006570.2	RefSeq	CDS	1188833	1189042	.	-	0	ID=cds1055;Name=YP_170139.1;Parent=gene1191;Note=ORF ftt1174c;Dbxref=UniProtKB%2FTrEMBL:Q5NFQ3,Genbank:YP_170139.1,GeneID:3192318;gbkey=CDS;product=hypothetical protein;protein_id=YP_170139.1;transl_table=11
NC_006570.2	RefSeq	gene	1189242	1189880	.	-	.	ID=gene1192;Name=FTT_1175c;Dbxref=GeneID:3192329;gbkey=Gene;locus_tag=FTT_1175c
NC_006570.2	RefSeq	CDS	1189242	1189880	.	-	0	ID=cds1056;Name=YP_170140.1;Parent=gene1192;Note=ORF ftt1175c;Dbxref=UniProtKB%2FTrEMBL:Q5NFQ2,Genbank:YP_170140.1,GeneID:3192329;gbkey=CDS;product=hypothetical protein;protein_id=YP_170140.1;transl_table=11
NC_006570.2	RefSeq	gene	1189877	1192224	.	-	.	ID=gene1193;Name=hsdR1;Dbxref=GeneID:3192186;gbkey=Gene;gene=hsdR1;locus_tag=FTT_1176c;pseudo=true
NC_006570.2	RefSeq	gene	1192556	1193614	.	-	.	ID=gene1194;Name=FTT_1177c;Dbxref=GeneID:3192331;gbkey=Gene;locus_tag=FTT_1177c
NC_006570.2	RefSeq	CDS	1192556	1193614	.	-	0	ID=cds1057;Name=YP_170141.1;Parent=gene1194;Note=ORF ftt1177c;Dbxref=UniProtKB%2FTrEMBL:Q5NFQ1,Genbank:YP_170141.1,GeneID:3192331;gbkey=CDS;product=hypothetical protein;protein_id=YP_170141.1;transl_table=11
NC_006570.2	RefSeq	gene	1193671	1193919	.	-	.	ID=gene1195;Name=FTT_1178c;Dbxref=GeneID:3191011;gbkey=Gene;locus_tag=FTT_1178c
NC_006570.2	RefSeq	CDS	1193671	1193919	.	-	0	ID=cds1058;Name=YP_170142.1;Parent=gene1195;Note=ORF ftt1178c;Dbxref=UniProtKB%2FTrEMBL:Q5NFQ0,Genbank:YP_170142.1,GeneID:3191011;gbkey=CDS;product=hypothetical protein;protein_id=YP_170142.1;transl_table=11
NC_006570.2	RefSeq	gene	1194339	1196156	.	+	.	ID=gene1196;Name=bipA;Dbxref=GeneID:3190966;gbkey=Gene;gene=bipA;locus_tag=FTT_1179
NC_006570.2	RefSeq	CDS	1194339	1196156	.	+	0	ID=cds1059;Name=YP_170143.1;Parent=gene1196;Note=Similar to Q9KNJ4 GTP-binding protein TypA from Vibrio cholerae %28609 aa%29. FASTA: opt: 2972 Z-score: 3319.9 E%28%29: 5e-177 Smith-Waterman score: 2972%3B 73.045identity in 601 aa overlap.;Dbxref=GOA:Q5NFP9,InterPro:IPR006298,UniProtKB%2FTrEMBL:Q5NFP9,Genbank:YP_170143.1,GeneID:3190966;gbkey=CDS;product=GTP binding translational elongation factor Tu and G family protein;protein_id=YP_170143.1;transl_table=11
NC_006570.2	RefSeq	gene	1196328	1197083	.	+	.	ID=gene1197;Name=FTT_1180;Dbxref=GeneID:3191009;gbkey=Gene;locus_tag=FTT_1180;pseudo=true
NC_006570.2	RefSeq	gene	1197099	1198904	.	-	.	ID=gene1198;Name=ggt;Dbxref=GeneID:3192241;gbkey=Gene;gene=ggt;locus_tag=FTT_1181c
NC_006570.2	RefSeq	CDS	1197099	1198904	.	-	0	ID=cds1060;Name=YP_170144.1;Parent=gene1198;Note=Similar to Q8EFL9 Gamma-glutamyltranspeptidase from Shewanella oneidensis %28579 aa%29. FASTA: opt: 2002 Z-score: 2308.7 E%28%29: 1.1e-120 Smith-Waterman score: 2002%3B 54.545 identity in 572 aa overlap.;Dbxref=GOA:Q5NFP8,InterPro:IPR000101,UniProtKB%2FTrEMBL:Q5NFP8,Genbank:YP_170144.1,GeneID:3192241;gbkey=CDS;product=gamma-glutamyltranspeptidase;protein_id=YP_170144.1;transl_table=11
NC_006570.2	RefSeq	gene	1198959	1199879	.	-	.	ID=gene1199;Name=vacJ;Dbxref=GeneID:3191928;gbkey=Gene;gene=vacJ;locus_tag=FTT_1182c;pseudo=true
NC_006570.2	RefSeq	gene	1199956	1201161	.	-	.	ID=gene1200;Name=FTT_1183c;Dbxref=GeneID:3191007;gbkey=Gene;locus_tag=FTT_1183c
NC_006570.2	RefSeq	CDS	1199956	1201161	.	-	0	ID=cds1061;Name=YP_170145.1;Parent=gene1200;Note=Similar to YFCK_ECO57 %28Q8XCQ7%29 Hypothetical protein yfcK from Escherichia coli %28668 aa%29. FASTA: opt: 495 Z-score: 572.0 E%28%29: 5.7e-24 Smith-Waterman score: 495%3B 28.087 identity in 413 aa overlap. ORF ftt1183c;Dbxref=GOA:Q5NFP7,InterPro:IPR017610,UniProtKB%2FTrEMBL:Q5NFP7,Genbank:YP_170145.1,GeneID:3191007;gbkey=CDS;product=lipoprotein;protein_id=YP_170145.1;transl_table=11
NC_006570.2	RefSeq	gene	1201203	1201508	.	-	.	ID=gene1201;Name=FTT_1184c;Dbxref=GeneID:3191004;gbkey=Gene;locus_tag=FTT_1184c
NC_006570.2	RefSeq	CDS	1201203	1201508	.	-	0	ID=cds1062;Name=YP_170146.1;Parent=gene1201;Note=Similar to Y369_VIBVU %28Q8DF55%29 Hypothetical protein VV10369 from Vibrio vulnificus %28117 aa%29. FASTA: opt: 238 Z-score: 320.2 E%28%29: 6.1e-10 Smith-Waterman score: 238%3B 41.304 identity in 92 aa overlap. ORF ftt1184c;Dbxref=InterPro:IPR005346,UniProtKB%2FTrEMBL:Q5NFP6,Genbank:YP_170146.1,GeneID:3191004;gbkey=CDS;product=hypothetical protein;protein_id=YP_170146.1;transl_table=11
NC_006570.2	RefSeq	gene	1201508	1201939	.	-	.	ID=gene1202;Name=FTT_1185c;Dbxref=GeneID:3191001;gbkey=Gene;locus_tag=FTT_1185c
NC_006570.2	RefSeq	CDS	1201508	1201939	.	-	0	ID=cds1063;Name=YP_170147.1;Parent=gene1202;Note=Similar to Q8ZH13 Hypothetical protein YPO1102 from Yersinia pestis %28144 aa%29. FASTA: opt: 463 Z-score: 623.4 E%28%29: 7.9e-27 Smith-Waterman score: 463%3B 43.662 39dentity in 142 aa overlap. ORF ftt1185c;Dbxref=InterPro:IPR005031,UniProtKB%2FTrEMBL:Q5NFP5,Genbank:YP_170147.1,GeneID:3191001;gbkey=CDS;product=hypothetical protein;protein_id=YP_170147.1;transl_table=11
NC_006570.2	RefSeq	gene	1202014	1202487	.	+	.	ID=gene1203;Name=smpB;Dbxref=GeneID:3190711;gbkey=Gene;gene=smpB;locus_tag=FTT_1186
NC_006570.2	RefSeq	CDS	1202014	1202487	.	+	0	ID=cds1064;Name=YP_170148.1;Parent=gene1203;Note=binds to ssrA RNA %28tmRNA%29 and is required for its successful binding to ribosomes%3B also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site%3B SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus%3B both the tmRNA and SmpB are regulated in cell cycle-dependent manner%3B functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation;Dbxref=GOA:Q5NFP4,InterPro:IPR000037,UniProtKB%2FSwiss-Prot:Q5NFP4,Genbank:YP_170148.1,GeneID:3190711;gbkey=CDS;product=SsrA-binding protein;protein_id=YP_170148.1;transl_table=11
NC_006570.2	RefSeq	gene	1202488	1203243	.	+	.	ID=gene1204;Name=FTT_1187;Dbxref=GeneID:3190998;gbkey=Gene;locus_tag=FTT_1187
NC_006570.2	RefSeq	CDS	1202488	1203243	.	+	0	ID=cds1065;Name=YP_170149.1;Parent=gene1204;Note=TtcA%3B YdaO%3B catalyzes the thiolation of cytosine 32 in specific tRNAs;Dbxref=GOA:Q5NFP3,InterPro:IPR014729,UniProtKB%2FSwiss-Prot:Q5NFP3,Genbank:YP_170149.1,GeneID:3190998;gbkey=CDS;product=C32 tRNA thiolase;protein_id=YP_170149.1;transl_table=11
NC_006570.2	RefSeq	gene	1203515	1204150	.	+	.	ID=gene1205;Name=FTT_1188;Dbxref=GeneID:3190993;gbkey=Gene;locus_tag=FTT_1188
NC_006570.2	RefSeq	CDS	1203515	1204150	.	+	0	ID=cds1066;Name=YP_170150.1;Parent=gene1205;Note=ORF ftt1188;Dbxref=UniProtKB%2FTrEMBL:Q5NFP2,Genbank:YP_170150.1,GeneID:3190993;gbkey=CDS;product=hypothetical protein;protein_id=YP_170150.1;transl_table=11
NC_006570.2	RefSeq	gene	1204390	1205676	.	-	.	ID=gene1206;Name=FTT_1189c;Dbxref=GeneID:3190992;gbkey=Gene;locus_tag=FTT_1189c;pseudo=true
NC_006570.2	RefSeq	gene	1205946	1207331	.	-	.	ID=gene1207;Name=xseA;Dbxref=GeneID:3192120;gbkey=Gene;gene=xseA;locus_tag=FTT_1190c
NC_006570.2	RefSeq	CDS	1205946	1207331	.	-	0	ID=cds1067;Name=YP_170151.1;Parent=gene1207;Note=bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides;Dbxref=GOA:Q5NFP1,InterPro:IPR003753,UniProtKB%2FTrEMBL:Q5NFP1,Genbank:YP_170151.1,GeneID:3192120;gbkey=CDS;product=exodeoxyribonuclease VII large subunit;protein_id=YP_170151.1;transl_table=11
NC_006570.2	RefSeq	gene	1207484	1208644	.	+	.	ID=gene1208;Name=FTT_1191;Dbxref=GeneID:3190989;gbkey=Gene;locus_tag=FTT_1191
NC_006570.2	RefSeq	CDS	1207484	1208644	.	+	0	ID=cds1068;Name=YP_170152.1;Parent=gene1208;Note=Similar to Q8RFU4 N-acyl-L-amino acid amidohydrolase from Fusobacterium nucleatum %28subsp. nucleatum%29 %28393 aa%29. FASTA: opt: 945 Z-score: 1170.3 E%28%29: 2.7e-57 Smith-Waterman score: 945%3B 38.259 identity in 379 aa overlap. ORF ftt1191;Dbxref=GOA:Q5NFP0,InterPro:IPR017439,UniProtKB%2FTrEMBL:Q5NFP0,Genbank:YP_170152.1,GeneID:3190989;gbkey=CDS;product=aminoacylase;protein_id=YP_170152.1;transl_table=11
NC_006570.2	RefSeq	gene	1208694	1209813	.	-	.	ID=gene1209;Name=FTT_1192c;Dbxref=GeneID:3190988;gbkey=Gene;locus_tag=FTT_1192c;pseudo=true
NC_006570.2	RefSeq	gene	1209927	1210445	.	-	.	ID=gene1210;Name=FTT_1193c;Dbxref=GeneID:3190990;gbkey=Gene;locus_tag=FTT_1193c
NC_006570.2	RefSeq	CDS	1209927	1210445	.	-	0	ID=cds1069;Name=YP_170153.1;Parent=gene1210;Note=Similar to Q8ZBY8 Hypothetical protein YPO3242 %28 amidotransferase%29 from Yersinia pestis %28257 aa%29. FASTA: opt: 251 Z-score: 317.2 E%28%29: 8.9e-10 Smith-Waterman score: 251%3B 26.609 identity in 233 aa overlap. ORF ftt1193c;Dbxref=UniProtKB%2FTrEMBL:Q5NFN9,Genbank:YP_170153.1,GeneID:3190990;gbkey=CDS;product=hypothetical protein;protein_id=YP_170153.1;transl_table=11
NC_006570.2	RefSeq	gene	1210462	1211388	.	-	.	ID=gene1211;Name=FTT_1194c;Dbxref=GeneID:3192282;gbkey=Gene;locus_tag=FTT_1194c
NC_006570.2	RefSeq	CDS	1210462	1211388	.	-	0	ID=cds1070;Name=YP_170154.1;Parent=gene1211;Note=Similar to Q884M8 Conserved hypothetical protein from Pseudomonas syringae %28pv. tomato%29 %28319 aa%29. FASTA: opt: 460 Z-score: 588.5 E%28%29: 6.9e-25 Smith-Waterman score: 460%3B 30.435identity in 322 aa overlap.  pseudogene %28upstream sequence matches homologs%29. ORF ftt1194c;Dbxref=InterPro:IPR007296,UniProtKB%2FTrEMBL:Q5NFN8,Genbank:YP_170154.1,GeneID:3192282;gbkey=CDS;product=lipoprotein;protein_id=YP_170154.1;transl_table=11
NC_006570.2	RefSeq	gene	1211448	1212903	.	-	.	ID=gene1212;Name=FTT_1195c;Dbxref=GeneID:3192280;gbkey=Gene;locus_tag=FTT_1195c;pseudo=true
NC_006570.2	RefSeq	gene	1213063	1214346	.	-	.	ID=gene1213;Name=FTT_1196c;Dbxref=GeneID:3192271;gbkey=Gene;locus_tag=FTT_1196c
NC_006570.2	RefSeq	CDS	1213063	1214346	.	-	0	ID=cds1071;Name=YP_170155.1;Parent=gene1213;Note=Similar to Q9ZC87 Proline%2Fbetaine transporter %28PROP7%29 from Rickettsia prowazekii %28423 aa%29. FASTA: opt: 746 Z-score: 810.0 E%28%29: 3.2e-37 Smith-Waterman score: 746%3B 31.450identity in 407 aa overlap. ORF ftt1196c;Dbxref=InterPro:IPR011701,UniProtKB%2FTrEMBL:Q5NFN7,Genbank:YP_170155.1,GeneID:3192271;gbkey=CDS;product=major facilitator transporter;protein_id=YP_170155.1;transl_table=11
NC_006570.2	RefSeq	gene	1214431	1215228	.	-	.	ID=gene1214;Name=murI;Dbxref=GeneID:3192033;gbkey=Gene;gene=murI;locus_tag=FTT_1197c
NC_006570.2	RefSeq	CDS	1214431	1215228	.	-	0	ID=cds1072;Name=YP_170156.1;Parent=gene1214;Note=Similar to MURI_NEIMC %28Q9RMM3%29 Glutamate racemase %28EC 5.1.1.3%29 from Neisseria meningitidis %28serogroup C%29 %28270 aa%29. FASTA: opt: 826 Z-score: 958.8 E%28%29: 1.6e-45 Smith-Waterman score: 826%3B 48.473identity in 262 aa overlap.;Dbxref=GOA:Q5NFN6,InterPro:IPR018187,UniProtKB%2FTrEMBL:Q5NFN6,Genbank:YP_170156.1,GeneID:3192033;gbkey=CDS;product=glutamate racemase;protein_id=YP_170156.1;transl_table=11
NC_006570.2	RefSeq	gene	1215228	1216058	.	-	.	ID=gene1215;Name=FTT_1198c;Dbxref=GeneID:3192270;gbkey=Gene;locus_tag=FTT_1198c
NC_006570.2	RefSeq	CDS	1215228	1216058	.	-	0	ID=cds1073;Name=YP_170157.1;Parent=gene1215;Note=ORF ftt1198c;Dbxref=InterPro:IPR011528,UniProtKB%2FTrEMBL:Q5NFN5,Genbank:YP_170157.1,GeneID:3192270;gbkey=CDS;product=hypothetical protein;protein_id=YP_170157.1;transl_table=11
NC_006570.2	RefSeq	gene	1216062	1218068	.	-	.	ID=gene1216;Name=uvrB;Dbxref=GeneID:3191920;gbkey=Gene;gene=uvrB;locus_tag=FTT_1199c
NC_006570.2	RefSeq	CDS	1216062	1218068	.	-	0	ID=cds1074;Name=YP_170158.1;Parent=gene1216;Note=The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands%2C where it probes for the presence of a lesion;Dbxref=GOA:Q5NFN4,InterPro:IPR014021,UniProtKB%2FSwiss-Prot:Q5NFN4,Genbank:YP_170158.1,GeneID:3191920;gbkey=CDS;product=excinuclease ABC subunit B;protein_id=YP_170158.1;transl_table=11
NC_006570.2	RefSeq	gene	1218070	1219518	.	-	.	ID=gene1217;Name=sbcB;Dbxref=GeneID:3191444;gbkey=Gene;gene=sbcB;locus_tag=FTT_1200c
NC_006570.2	RefSeq	CDS	1218070	1219518	.	-	0	ID=cds1075;Name=YP_170159.1;Parent=gene1217;Note=Similar to Q83BX4 Exodeoxyribonuclease I%2C from Coxiella burnetii %28458 aa%29. FASTA: opt: 677 Z-score: 797.9 E%28%29: 1.5e-36 Smith-Waterman score: 1190%3B 39.875 identity in 479 aa overlap.;Dbxref=GOA:Q5NFN3,InterPro:IPR013620,UniProtKB%2FTrEMBL:Q5NFN3,Genbank:YP_170159.1,GeneID:3191444;gbkey=CDS;product=exodeoxyribonuclease I;protein_id=YP_170159.1;transl_table=11
NC_006570.2	RefSeq	gene	1219652	1220374	.	-	.	ID=gene1218;Name=FTT_1201c;Dbxref=GeneID:3192265;gbkey=Gene;locus_tag=FTT_1201c
NC_006570.2	RefSeq	CDS	1219652	1220374	.	-	0	ID=cds1076;Name=YP_170160.1;Parent=gene1218;Note=Similar to Q9KKP5 Oxidoreductase%2Cshort-chain dehydrogenase%2Freductase family from Vibrio cholerae %28239 aa%29. FASTA: opt: 1097 Z-score: 1344.5 E%28%29: 5.4e-67 Smith-Waterman score: 1097%3B 72.458identity in 236 aa overlap. ORF ftt1201c;Dbxref=GOA:Q5NFN2,InterPro:IPR016040,UniProtKB%2FTrEMBL:Q5NFN2,Genbank:YP_170160.1,GeneID:3192265;gbkey=CDS;product=oxidoreductase%2C short-chain dehydrogenase family protein;protein_id=YP_170160.1;transl_table=11
NC_006570.2	RefSeq	gene	1220490	1221389	.	+	.	ID=gene1219;Name=FTT_1202;Dbxref=GeneID:3192261;gbkey=Gene;locus_tag=FTT_1202
NC_006570.2	RefSeq	CDS	1220490	1221389	.	+	0	ID=cds1077;Name=YP_170161.1;Parent=gene1219;Note=Similar to Q9KKP4 Transcriptional regulator%2C LysR family from Vibrio cholerae %28301 aa%29. FASTA: opt: 661 Z-score: 794.3 E%28%29: 2.4e-36 Smith-Waterman score: 661%3B 36.120identity in 299 aa overlap. ORF ftt1202;Dbxref=GOA:Q5NFN1,InterPro:IPR011991,UniProtKB%2FTrEMBL:Q5NFN1,Genbank:YP_170161.1,GeneID:3192261;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=YP_170161.1;transl_table=11
NC_006570.2	RefSeq	gene	1221400	1222305	.	-	.	ID=gene1220;Name=FTT_1203c;Dbxref=GeneID:3192257;gbkey=Gene;locus_tag=FTT_1203c
NC_006570.2	RefSeq	CDS	1221400	1222305	.	-	0	ID=cds1078;Name=YP_170162.1;Parent=gene1220;Note=ORF ftt1203c;Dbxref=UniProtKB%2FTrEMBL:Q5NFN0,Genbank:YP_170162.1,GeneID:3192257;gbkey=CDS;product=hypothetical protein;protein_id=YP_170162.1;transl_table=11
NC_006570.2	RefSeq	gene	1222292	1223374	.	-	.	ID=gene1221;Name=FTT_1204c;Dbxref=GeneID:3192253;gbkey=Gene;locus_tag=FTT_1204c
NC_006570.2	RefSeq	CDS	1222292	1223374	.	-	0	ID=cds1079;Name=YP_170163.1;Parent=gene1221;Note=ORF ftt1204c;Dbxref=UniProtKB%2FTrEMBL:Q5NFM9,Genbank:YP_170163.1,GeneID:3192253;gbkey=CDS;product=hypothetical protein;protein_id=YP_170163.1;transl_table=11
NC_006570.2	RefSeq	gene	1223517	1225400	.	+	.	ID=gene1222;Name=gidA;Dbxref=GeneID:3192517;gbkey=Gene;gene=gidA;locus_tag=FTT_1205
NC_006570.2	RefSeq	CDS	1223517	1225400	.	+	0	ID=cds1080;Name=YP_170164.1;Parent=gene1222;Note=GidA%3B glucose-inhibited cell division protein A%3B involved in the 5-carboxymethylaminomethyl modification %28mnm%285%29s%282%29U%29 of the wobble uridine base in some tRNAs;Dbxref=GOA:Q5NFM8,InterPro:IPR004416,UniProtKB%2FSwiss-Prot:Q5NFM8,Genbank:YP_170164.1,GeneID:3192517;gbkey=CDS;product=tRNA uridine 5-carboxymethylaminomethyl modification protein GidA;protein_id=YP_170164.1;transl_table=11
NC_006570.2	RefSeq	gene	1225412	1225804	.	+	.	ID=gene1223;Name=FTT_1206;Dbxref=GeneID:3192252;gbkey=Gene;locus_tag=FTT_1206
NC_006570.2	RefSeq	CDS	1225412	1225804	.	+	0	ID=cds1081;Name=YP_170165.1;Parent=gene1223;Note=ORF ftt1206;Dbxref=UniProtKB%2FTrEMBL:Q5NFM7,Genbank:YP_170165.1,GeneID:3192252;gbkey=CDS;product=hypothetical protein;protein_id=YP_170165.1;transl_table=11
NC_006570.2	RefSeq	gene	1225818	1227188	.	+	.	ID=gene1224;Name=FTT_1207;Dbxref=GeneID:3192249;gbkey=Gene;locus_tag=FTT_1207
NC_006570.2	RefSeq	CDS	1225818	1227188	.	+	0	ID=cds1082;Name=YP_170166.1;Parent=gene1224;Note=ORF ftt1207;Dbxref=GOA:Q5NFM6,InterPro:IPR000175,UniProtKB%2FTrEMBL:Q5NFM6,Genbank:YP_170166.1,GeneID:3192249;gbkey=CDS;product=hypothetical protein;protein_id=YP_170166.1;transl_table=11
NC_006570.2	RefSeq	gene	1227190	1227864	.	+	.	ID=gene1225;Name=rpiA;Dbxref=GeneID:3192024;gbkey=Gene;gene=rpiA;locus_tag=FTT_1208
NC_006570.2	RefSeq	CDS	1227190	1227864	.	+	0	ID=cds1083;Name=YP_170167.1;Parent=gene1225;Note=Catalyzes D-ribose 5-phosphate --%3E D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway;Dbxref=GOA:Q5NFM5,InterPro:IPR004788,UniProtKB%2FSwiss-Prot:Q5NFM5,Genbank:YP_170167.1,GeneID:3192024;gbkey=CDS;product=ribose-5-phosphate isomerase A;protein_id=YP_170167.1;transl_table=11
NC_006570.2	RefSeq	gene	1227915	1229837	.	-	.	ID=gene1226;Name=FTT_1209c;Dbxref=GeneID:3192250;gbkey=Gene;locus_tag=FTT_1209c;pseudo=true
NC_006570.2	RefSeq	repeat_region	1229839	1229850	.	-	.	ID=id156;Note=ISFtu1 12bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	gene	1229938	1230722	.	-	.	ID=gene1227;Name=isftu1;Dbxref=GeneID:3190805;gbkey=Gene;gene=isftu1;locus_tag=FTT_1210c
NC_006570.2	RefSeq	CDS	1230396	1230722	.	-	0	ID=cds1084;Name=YP_170168.1;Parent=gene1227;Note=ISFtu1. Transposase%2C member of the IS630 Tc-1 mariner family. Identical to Q93EJ6  transposase from Francisella tularensis %28118 aa%29 from aa 144-261. Identical to Q93EJ7  transposase from Francisella tularensis %28126 aa%29 from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF%27s. ORF1 %28identical to Q93EJ7%29 contains a programmed ribosomal frameshifting motif%2C 5%27-AAAAAAAG-3%27 at aa position 109 which permits frameshifting to ORF2 %28identical to Q93EJ6%29 to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family%2C and also mariner elements%2C show that this transposase shares strongly conserved residues%2C including a fully conserved dipeptide%2CAsp-Glu %28DE%29%2C and a block consisting of a fully conserved Asp and highly conserved Glu%2C separated by 34 or 35 residues %28D35E%29. The conserved dipeptide is only present if ribosomal frameshifting occurs.;Dbxref=UniProtKB%2FTrEMBL:Q5NIH2,Genbank:YP_170168.1,GeneID:3190805;gbkey=CDS;product=transposase;protein_id=YP_170168.1;transl_table=11
NC_006570.2	RefSeq	CDS	1229938	1230396	.	-	0	ID=cds1084;Name=YP_170168.1;Parent=gene1227;Note=ISFtu1. Transposase%2C member of the IS630 Tc-1 mariner family. Identical to Q93EJ6  transposase from Francisella tularensis %28118 aa%29 from aa 144-261. Identical to Q93EJ7  transposase from Francisella tularensis %28126 aa%29 from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF%27s. ORF1 %28identical to Q93EJ7%29 contains a programmed ribosomal frameshifting motif%2C 5%27-AAAAAAAG-3%27 at aa position 109 which permits frameshifting to ORF2 %28identical to Q93EJ6%29 to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family%2C and also mariner elements%2C show that this transposase shares strongly conserved residues%2C including a fully conserved dipeptide%2CAsp-Glu %28DE%29%2C and a block consisting of a fully conserved Asp and highly conserved Glu%2C separated by 34 or 35 residues %28D35E%29. The conserved dipeptide is only present if ribosomal frameshifting occurs.;Dbxref=UniProtKB%2FTrEMBL:Q5NIH2,Genbank:YP_170168.1,GeneID:3190805;gbkey=CDS;product=transposase;protein_id=YP_170168.1;transl_table=11
NC_006570.2	RefSeq	repeat_region	1230743	1230758	.	-	.	ID=id157;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	1230759	1230774	.	-	.	ID=id158;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	1230775	1230786	.	-	.	ID=id159;Note=ISFtu1 12bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	gene	1230784	1231176	.	-	.	ID=gene1228;Name=FTT_1211c;Dbxref=GeneID:3192240;gbkey=Gene;locus_tag=FTT_1211c
NC_006570.2	RefSeq	CDS	1230784	1231176	.	-	0	ID=cds1085;Name=YP_170169.1;Parent=gene1228;Note=CDS is disrupted by the insertion of an ISFtu1 element occurring very near the C-terminal end. It is not clear whether this insertion affects the function of the protein ORF ftt1211c;Dbxref=UniProtKB%2FTrEMBL:Q5NFM3,Genbank:YP_170169.1,GeneID:3192240;gbkey=CDS;product=hypothetical protein;protein_id=YP_170169.1;transl_table=11
NC_006570.2	RefSeq	gene	1231176	1231559	.	-	.	ID=gene1229;Name=gloA;Dbxref=GeneID:3192332;gbkey=Gene;gene=gloA;locus_tag=FTT_1212c
NC_006570.2	RefSeq	CDS	1231176	1231559	.	-	0	ID=cds1086;Name=YP_170170.1;Parent=gene1229;Note=Similar to LGUL_VIBPA %28P46235%29 Probable lactoylglutathione lyase from Vibrio parahaemolyticus %28138 aa%29. FASTA: opt: 549 Z-score: 759.1 E%28%29: 2.2e-34 Smith-Waterman score: 549%3B 64.516 identity in 124 aa overlap.;Dbxref=GOA:Q5NFM2,InterPro:IPR018146,UniProtKB%2FTrEMBL:Q5NFM2,Genbank:YP_170170.1,GeneID:3192332;gbkey=CDS;product=lactoylglutathione lyase;protein_id=YP_170170.1;transl_table=11
NC_006570.2	RefSeq	gene	1231675	1232388	.	+	.	ID=gene1230;Name=FTT_1213;Dbxref=GeneID:3192236;gbkey=Gene;locus_tag=FTT_1213
NC_006570.2	RefSeq	CDS	1231675	1232388	.	+	0	ID=cds1087;Name=YP_170171.1;Parent=gene1230;Note=Similar to YPDP_BACSU %28P54163%29 Hypothetical protein ypdP from Bacillus subtilis %28229 aa%29. FASTA: opt: 472 Z-score: 563.3 E%28%29: 1.7e-23 Smith-Waterman score: 472%3B 40.435 identity in 230 aa overlap. ORF ftt1213;Dbxref=InterPro:IPR003744,UniProtKB%2FTrEMBL:Q5NFM1,Genbank:YP_170171.1,GeneID:3192236;gbkey=CDS;product=hypothetical protein;protein_id=YP_170171.1;transl_table=11
NC_006570.2	RefSeq	gene	1232642	1233433	.	-	.	ID=gene1231;Name=FTT_1214c;Dbxref=GeneID:3192234;gbkey=Gene;locus_tag=FTT_1214c
NC_006570.2	RefSeq	CDS	1232642	1233433	.	-	0	ID=cds1088;Name=YP_170172.1;Parent=gene1231;Note=Similar to Q8XN14 Hypothetical protein CPE0524 from Clostridium perfringens %28264 aa%29. FASTA: opt: 486 Z-score: 584.5 E%28%29: 1.1e-24 Smith-Waterman score: 486%3B 31.939 identity in 263 aa overlap. ORF ftt1214c;Dbxref=GOA:Q5NFM0,InterPro:IPR013200,UniProtKB%2FTrEMBL:Q5NFM0,Genbank:YP_170172.1,GeneID:3192234;gbkey=CDS;product=haloacid dehalogenase;protein_id=YP_170172.1;transl_table=11
NC_006570.2	RefSeq	gene	1234068	1235090	.	-	.	ID=gene1232;Name=queA;Dbxref=GeneID:3191648;gbkey=Gene;gene=queA;locus_tag=FTT_1215c
NC_006570.2	RefSeq	CDS	1234068	1235090	.	-	0	ID=cds1089;Name=YP_170173.1;Parent=gene1232;Note=Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step;Dbxref=GOA:Q5NFL9,InterPro:IPR003699,UniProtKB%2FSwiss-Prot:Q5NFL9,Genbank:YP_170173.1,GeneID:3191648;gbkey=CDS;product=S-adenosylmethionine--tRNA ribosyltransferase-isomerase;protein_id=YP_170173.1;transl_table=11
NC_006570.2	RefSeq	gene	1235110	1235571	.	-	.	ID=gene1233;Name=FTT_1216c;Dbxref=GeneID:3192235;gbkey=Gene;locus_tag=FTT_1216c
NC_006570.2	RefSeq	CDS	1235110	1235571	.	-	0	ID=cds1090;Name=YP_170174.1;Parent=gene1233;Note=ORF ftt1216c;Dbxref=UniProtKB%2FTrEMBL:Q5NFL8,Genbank:YP_170174.1,GeneID:3192235;gbkey=CDS;product=hypothetical protein;protein_id=YP_170174.1;transl_table=11
NC_006570.2	RefSeq	gene	1235593	1236828	.	-	.	ID=gene1234;Name=visC;Dbxref=GeneID:3191940;gbkey=Gene;gene=visC;locus_tag=FTT_1217c
NC_006570.2	RefSeq	CDS	1235593	1236828	.	-	0	ID=cds1091;Name=YP_170175.1;Parent=gene1234;Note=Similar to Q83F72 VisC protein from Coxiella burnetii %28411 aa%29. FASTA: opt: 645 Z-score: 778.5 E%28%29: 1.8e-35 Smith-Waterman score: 858%3B 37.192 identity in 406 aa overlap.;Dbxref=GOA:Q5NFL7,InterPro:IPR018168,UniProtKB%2FTrEMBL:Q5NFL7,Genbank:YP_170175.1,GeneID:3191940;gbkey=CDS;product=monooxygenase family protein;protein_id=YP_170175.1;transl_table=11
NC_006570.2	RefSeq	gene	1236818	1238029	.	-	.	ID=gene1235;Name=ubiH;Dbxref=GeneID:3191137;gbkey=Gene;gene=ubiH;locus_tag=FTT_1218c
NC_006570.2	RefSeq	CDS	1236818	1238029	.	-	0	ID=cds1092;Name=YP_170176.1;Parent=gene1235;Note=Similar to Q87UH4 2-octaprenyl-6-methoxyphenyl hydroxylase from Pseudomonas syringae %28pv. tomato%29 %28395 aa%29. FASTA: opt: 654 Z-score: 770.5 E%28%29: 5e-35 Smith-Waterman score: 654%3B 32.143 identity in 392 aa overlap.;Dbxref=GOA:Q5NFL6,InterPro:IPR010971,UniProtKB%2FTrEMBL:Q5NFL6,Genbank:YP_170176.1,GeneID:3191137;gbkey=CDS;product=2-octaprenyl-6-methoxyphenyl hydroxylase;protein_id=YP_170176.1;transl_table=11
NC_006570.2	RefSeq	gene	1238038	1238574	.	-	.	ID=gene1236;Name=FTT_1219c;Dbxref=GeneID:3192233;gbkey=Gene;locus_tag=FTT_1219c
NC_006570.2	RefSeq	CDS	1238038	1238574	.	-	0	ID=cds1093;Name=YP_170177.1;Parent=gene1236;Note=Similar to YGA1_PSEPK %28Q88CI0%29 Hypothetical UPF0149 protein PP5201 from Pseudomonas putida %28strain KT2440%29 %28184 aa%29. FASTA: opt: 269 Z-score: 349.3 E%28%29: 1.4e-11 Smith-Waterman score: 269%3B 34.637identity in 179 aa overlap. ORF ftt1219c;Dbxref=InterPro:IPR005356,UniProtKB%2FTrEMBL:Q5NFL5,Genbank:YP_170177.1,GeneID:3192233;gbkey=CDS;product=hypothetical protein;protein_id=YP_170177.1;transl_table=11
NC_006570.2	RefSeq	gene	1238975	1239523	.	+	.	ID=gene1237;Name=FTT_1220;Dbxref=GeneID:3192232;gbkey=Gene;locus_tag=FTT_1220
NC_006570.2	RefSeq	CDS	1238975	1239523	.	+	0	ID=cds1094;Name=YP_170178.1;Parent=gene1237;Note=Similar to Q8ZM70  ligase from Salmonella typhimurium %28182 aa%29. FASTA: opt: 317 Z-score: 411.1 E%28%29: 5.2e-15 Smith-Waterman score: 317%3B 32.727 identity in 165 aa overlap. ORF ftt1220;Dbxref=GOA:Q5NFL4,InterPro:IPR002698,UniProtKB%2FTrEMBL:Q5NFL4,Genbank:YP_170178.1,GeneID:3192232;gbkey=CDS;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=YP_170178.1;transl_table=11
NC_006570.2	RefSeq	gene	1239526	1239792	.	+	.	ID=gene1238;Name=FTT_1221;Dbxref=GeneID:3192229;gbkey=Gene;locus_tag=FTT_1221
NC_006570.2	RefSeq	CDS	1239526	1239792	.	+	0	ID=cds1095;Name=YP_170179.1;Parent=gene1238;Note=ORF ftt1221;Dbxref=InterPro:IPR002634,UniProtKB%2FTrEMBL:Q5NFL3,Genbank:YP_170179.1,GeneID:3192229;gbkey=CDS;product=hypothetical protein;protein_id=YP_170179.1;transl_table=11
NC_006570.2	RefSeq	gene	1239799	1240425	.	+	.	ID=gene1239;Name=dedA2;Dbxref=GeneID:3191509;gbkey=Gene;gene=dedA2;locus_tag=FTT_1222
NC_006570.2	RefSeq	CDS	1239799	1240425	.	+	0	ID=cds1096;Name=YP_170180.1;Parent=gene1239;Note=Similar to Q89YU2 Conserved hypothetical protein%2C membrane protein from Bacteroides thetaiotaomicron %28213 aa%29. FASTA: opt: 602 Z-score: 702.4 E%28%29: 3.1e-31 Smith-Waterman score: 602%3B 42.857identity in 210 aa overlap.;Dbxref=InterPro:IPR015414,UniProtKB%2FTrEMBL:Q5NFL2,Genbank:YP_170180.1,GeneID:3191509;gbkey=CDS;product=DedA family protein;protein_id=YP_170180.1;transl_table=11
NC_006570.2	RefSeq	gene	1240481	1241128	.	+	.	ID=gene1240;Name=dedA1;Dbxref=GeneID:3191510;gbkey=Gene;gene=dedA1;locus_tag=FTT_1223
NC_006570.2	RefSeq	CDS	1240481	1241128	.	+	0	ID=cds1097;Name=YP_170181.1;Parent=gene1240;Note=Similar to Q8R8Y8 Hypothetical protein DedA2 from Thermoanaerobacter tengcongensis %28209 aa%29. FAST: opt: 674 Z-score: 828.7 E%28%29: 2.9e-38 Smith-Waterman score: 674%3B 45.894 identity in 207 aa overlap.;Dbxref=InterPro:IPR015414,UniProtKB%2FTrEMBL:Q5NFL1,Genbank:YP_170181.1,GeneID:3191510;gbkey=CDS;product=DedA family protein;protein_id=YP_170181.1;transl_table=11
NC_006570.2	RefSeq	gene	1241204	1241902	.	-	.	ID=gene1241;Name=recO;Dbxref=GeneID:3191635;gbkey=Gene;gene=recO;locus_tag=FTT_1224c
NC_006570.2	RefSeq	CDS	1241204	1241902	.	-	0	ID=cds1098;Name=YP_170182.1;Parent=gene1241;Note=Similar to RECO_VIBVU %28Q8DC74%29 DNA repair protein recO from Vibrio vulnificus %28243 aa%29. FASTA: opt: 244 Z-score: 288.3 E%28%29: 3.6e-08 Smith-Waterman score: 244%3B 29.130 identity in 230 aa overlap.;Dbxref=GOA:Q5NFL0,InterPro:IPR003717,UniProtKB%2FTrEMBL:Q5NFL0,Genbank:YP_170182.1,GeneID:3191635;gbkey=CDS;product=DNA repair protein recO;protein_id=YP_170182.1;transl_table=11
NC_006570.2	RefSeq	gene	1241886	1242215	.	-	.	ID=gene1242;Name=FTT_1225c;Dbxref=GeneID:3192227;gbkey=Gene;locus_tag=FTT_1225c
NC_006570.2	RefSeq	CDS	1241886	1242215	.	-	0	ID=cds1099;Name=YP_170183.1;Parent=gene1242;Note=ORF ftt1225c;Dbxref=UniProtKB%2FTrEMBL:Q5NFK9,Genbank:YP_170183.1,GeneID:3192227;gbkey=CDS;product=hypothetical protein;protein_id=YP_170183.1;transl_table=11
NC_006570.2	RefSeq	gene	1242208	1243383	.	-	.	ID=gene1243;Name=iscS;Dbxref=GeneID:3191911;gbkey=Gene;gene=iscS;locus_tag=FTT_1226c
NC_006570.2	RefSeq	CDS	1242208	1243383	.	-	0	ID=cds1100;Name=YP_170184.1;Parent=gene1243;Note=Similar to ISCS_VIBCH %28Q9KTY2%29 Cysteine desulfurase %28EC 4.4.1.-%29 from Vibrio cholerae %28404 aa%29. FASTA: opt: 1104 Z-score: 1336.0 E%28%29: 1.6e-66 Smith-Waterman score: 1104%3B 45.812 identity in 382 aa overlap.;Dbxref=GOA:Q5NFK8,InterPro:IPR016454,UniProtKB%2FTrEMBL:Q5NFK8,Genbank:YP_170184.1,GeneID:3191911;gbkey=CDS;product=cysteine desulfurase;protein_id=YP_170184.1;transl_table=11
NC_006570.2	RefSeq	gene	1243633	1246290	.	+	.	ID=gene1244;Name=rne;Dbxref=GeneID:3191610;gbkey=Gene;gene=rne;locus_tag=FTT_1227
NC_006570.2	RefSeq	CDS	1243633	1246290	.	+	0	ID=cds1101;Name=YP_170185.1;Parent=gene1244;Note=Similar to Q9KQG8 Ribonuclease E from Vibrio cholerae %281052 aa%29. FASTA: opt: 1928 Z-score: 1743.2 E%28%29: 3.3e-89 Smith-Waterman score: 1943%3B 43.377 identity in 770 aa overlap.;Dbxref=GOA:Q5NFK7,InterPro:IPR012340,UniProtKB%2FTrEMBL:Q5NFK7,Genbank:YP_170185.1,GeneID:3191610;gbkey=CDS;product=ribonuclease E;protein_id=YP_170185.1;transl_table=11
NC_006570.2	RefSeq	gene	1246305	1247111	.	+	.	ID=gene1245;Name=lgt;Dbxref=GeneID:3190760;gbkey=Gene;gene=lgt;locus_tag=FTT_1228
NC_006570.2	RefSeq	CDS	1246305	1247111	.	+	0	ID=cds1102;Name=YP_170186.1;Parent=gene1245;Note=transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein;Dbxref=GOA:Q5NFK6,InterPro:IPR001640,UniProtKB%2FSwiss-Prot:Q5NFK6,Genbank:YP_170186.1,GeneID:3190760;gbkey=CDS;product=prolipoprotein diacylglyceryl transferase;protein_id=YP_170186.1;transl_table=11
NC_006570.2	RefSeq	gene	1247096	1247920	.	+	.	ID=gene1246;Name=thyA;Dbxref=GeneID:3190786;gbkey=Gene;gene=thyA;locus_tag=FTT_1229
NC_006570.2	RefSeq	CDS	1247096	1247920	.	+	0	ID=cds1103;Name=YP_170187.1;Parent=gene1246;Note=ThyA%3B catalyzes formation of dTMP and 7%2C8-dihydrofolate from 5%2C10-methylenetetrahydrofolate and dUMP%3B involved in deoxyribonucleotide biosynthesis%3B there are 2 copies in some Bacilli%2C one of which appears to be phage-derived;Dbxref=GOA:Q5NFK5,InterPro:IPR000398,UniProtKB%2FSwiss-Prot:Q5NFK5,Genbank:YP_170187.1,GeneID:3190786;gbkey=CDS;product=thymidylate synthase;protein_id=YP_170187.1;transl_table=11
NC_006570.2	RefSeq	gene	1247923	1249167	.	+	.	ID=gene1247;Name=serA;Dbxref=GeneID:3191850;gbkey=Gene;gene=serA;locus_tag=FTT_1230
NC_006570.2	RefSeq	CDS	1247923	1249167	.	+	0	ID=cds1104;Name=YP_170188.1;Parent=gene1247;Note=catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis%3B can also reduce alpha ketoglutarate to form 2-hydroxyglutarate;Dbxref=GOA:Q5NFK4,InterPro:IPR018483,UniProtKB%2FTrEMBL:Q5NFK4,Genbank:YP_170188.1,GeneID:3191850;gbkey=CDS;product=D-3-phosphoglycerate dehydrogenase;protein_id=YP_170188.1;transl_table=11
NC_006570.2	RefSeq	gene	1249168	1250364	.	+	.	ID=gene1248;Name=mesJ;Dbxref=GeneID:3191862;gbkey=Gene;gene=mesJ;locus_tag=FTT_1231
NC_006570.2	RefSeq	CDS	1249168	1250364	.	+	0	ID=cds1105;Name=YP_170189.1;Parent=gene1248;Note=Similar to Q83BJ9 MesJ protein from Coxiella burnetii %28449 aa%29. FASTA: opt: 639 Z-score: 733.1 E%28%29: 6.1e-33 Smith-Waterman score: 726%3B 31.387identity in 411 aa overlap. Thought to be a cell cycle protein;Dbxref=GOA:Q5NFK3,InterPro:IPR014729,UniProtKB%2FSwiss-Prot:Q5NFK3,Genbank:YP_170189.1,GeneID:3191862;gbkey=CDS;product=PP-loop family protein;protein_id=YP_170189.1;transl_table=11
NC_006570.2	RefSeq	repeat_region	1250445	1250456	.	+	.	ID=id160;Note=ISFtu1 12bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	1250457	1250472	.	+	.	ID=id161;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	1250473	1250488	.	+	.	ID=id162;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;gbkey=repeat_region
NC_006570.2	RefSeq	gene	1250509	1251293	.	+	.	ID=gene1249;Name=isftu1;Dbxref=GeneID:3190831;gbkey=Gene;gene=isftu1;locus_tag=FTT_1232
NC_006570.2	RefSeq	CDS	1250509	1250835	.	+	0	ID=cds1106;Name=YP_170190.1;Parent=gene1249;Note=ISFtu1. Transposase%2C member of the IS630 Tc-1 mariner family. Identical to Q93EJ6  transposase from Francisella tularensis %28118 aa%29 from aa 144-261. Identical to Q93EJ7  transposase from Francisella tularensis %28126 aa%29 from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF%27s. ORF1 %28identical to Q93EJ7%29 contains a programmed ribosomal frameshifting motif%2C 5%27-AAAAAAAG-3%27 at aa position 109 which permits frameshifting to ORF2 %28identical to Q93EJ6%29 to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family%2C and also mariner elements%2C show that this transposase shares strongly conserved residues%2C including a fully conserved dipeptide%2CAsp-Glu %28DE%29%2C and a block consisting of a fully conserved Asp and highly conserved Glu%2C separated by 34 or 35 residues %28D35E%29. The conserved dipeptide is only present if ribosomal frameshifting occurs.;Dbxref=UniProtKB%2FTrEMBL:Q5NIH2,Genbank:YP_170190.1,GeneID:3190831;gbkey=CDS;product=transposase;protein_id=YP_170190.1;transl_table=11
NC_006570.2	RefSeq	CDS	1250835	1251293	.	+	0	ID=cds1106;Name=YP_170190.1;Parent=gene1249;Note=ISFtu1. Transposase%2C member of the IS630 Tc-1 mariner family. Identical to Q93EJ6  transposase from Francisella tularensis %28118 aa%29 from aa 144-261. Identical to Q93EJ7  transposase from Francisella tularensis %28126 aa%29 from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF%27s. ORF1 %28identical to Q93EJ7%29 contains a programmed ribosomal frameshifting motif%2C 5%27-AAAAAAAG-3%27 at aa position 109 which permits frameshifting to ORF2 %28identical to Q93EJ6%29 to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family%2C and also mariner elements%2C show that this transposase shares strongly conserved residues%2C including a fully conserved dipeptide%2CAsp-Glu %28DE%29%2C and a block consisting of a fully conserved Asp and highly conserved Glu%2C separated by 34 or 35 residues %28D35E%29. The conserved dipeptide is only present if ribosomal frameshifting occurs.;Dbxref=UniProtKB%2FTrEMBL:Q5NIH2,Genbank:YP_170190.1,GeneID:3190831;gbkey=CDS;product=transposase;protein_id=YP_170190.1;transl_table=11
NC_006570.2	RefSeq	gene	1251367	1252695	.	-	.	ID=gene1250;Name=yjdL;Dbxref=GeneID:3191280;gbkey=Gene;gene=yjdL;locus_tag=FTT_1233c
NC_006570.2	RefSeq	CDS	1251367	1252695	.	-	0	ID=cds1107;Name=YP_170191.1;Parent=gene1250;Note=Similar to YJDL_ECOLI %28P39276%29 Hypothetical transporter yjdL from Escherichia coli %28485 aa%29.FASTA: opt: 1064 Z-score: 1135.9 E%28%29: 2.2e-55 Smith-Waterman score: 1064%3B 38.222 identity in 450 aa overlap.This CDS is disrupted by the insertion of an ISFtu1 element occurring very near the C-terminal end. It is not clear whether this insertion affects the function of the protein;Dbxref=GOA:Q5NFK1,InterPro:IPR005279,UniProtKB%2FTrEMBL:Q5NFK1,Genbank:YP_170191.1,GeneID:3191280;gbkey=CDS;product=proton-dependent oligopeptide transport %28POT%29 family protein;protein_id=YP_170191.1;transl_table=11
NC_006570.2	RefSeq	repeat_region	1251381	1251392	.	+	.	ID=id163;Note=ISFtu1 12bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	gene	1252946	1254091	.	+	.	ID=gene1251;Name=FTT_1234;Dbxref=GeneID:3192226;gbkey=Gene;locus_tag=FTT_1234
NC_006570.2	RefSeq	CDS	1252946	1254091	.	+	0	ID=cds1108;Name=YP_170192.1;Parent=gene1251;Note=Similar to Q8YIA2 Choloylglycine hydrolase %28EC 3.5.1.24%29 from Brucella melitensis %28367 aa%29. FASTA: opt: 387 Z-score: 460.1 E%28%29: 9.7e-18 Smith-Waterman score: 574%3B 34.718 identity in 337 aa overlap. ORF ftt1234;Dbxref=GOA:Q5NFK0,InterPro:IPR003199,UniProtKB%2FTrEMBL:Q5NFK0,Genbank:YP_170192.1,GeneID:3192226;gbkey=CDS;product=choloylglycine hydrolase family protein;protein_id=YP_170192.1;transl_table=11
NC_006570.2	RefSeq	gene	1254092	1255156	.	-	.	ID=gene1252;Name=lpcC;Dbxref=GeneID:3190861;gbkey=Gene;gene=lpcC;locus_tag=FTT_1235c
NC_006570.2	RefSeq	CDS	1254092	1255156	.	-	0	ID=cds1109;Name=YP_170193.1;Parent=gene1252;Note=Similar to Q8FZH8 Lipopolysaccharide core biosynthesis mannosyltransferase LpcC from Brucella suis %28354 aa%29. FASTA: opt: 825 Z-score: 1005.6 E%28%29: 4e-48 Smith-Waterman score: 825%3B 38.352 identity in 352 aa overlap.;Dbxref=GOA:Q5NFJ9,InterPro:IPR001296,UniProtKB%2FTrEMBL:Q5NFJ9,Genbank:YP_170193.1,GeneID:3190861;gbkey=CDS;product=glycosyl transferase family protein;protein_id=YP_170193.1;transl_table=11
NC_006570.2	RefSeq	gene	1255326	1256414	.	+	.	ID=gene1253;Name=FTT_1236;Dbxref=GeneID:3192220;gbkey=Gene;locus_tag=FTT_1236
NC_006570.2	RefSeq	CDS	1255326	1256414	.	+	0	ID=cds1110;Name=YP_170194.1;Parent=gene1253;Note=ORF ftt1236;Dbxref=UniProtKB%2FTrEMBL:Q5NFJ8,Genbank:YP_170194.1,GeneID:3192220;gbkey=CDS;product=hypothetical protein;protein_id=YP_170194.1;transl_table=11
NC_006570.2	RefSeq	gene	1256422	1257312	.	+	.	ID=gene1254;Name=FTT_1237;Dbxref=GeneID:3192224;gbkey=Gene;locus_tag=FTT_1237
NC_006570.2	RefSeq	CDS	1256422	1257312	.	+	0	ID=cds1111;Name=YP_170195.1;Parent=gene1254;Note=Similar to Q8A3T1  stress protein from Bacteroides thetaiotaomicron %28309 aa%29. FASTA: opt: 308 Z-score: 375.2 E%28%29: 5.2e-13 Smith-Waterman score: 348%3B 26.599 identity in 297 aa overlap. ORF ftt1237;Dbxref=GOA:Q5NFJ7,InterPro:IPR002495,UniProtKB%2FTrEMBL:Q5NFJ7,Genbank:YP_170195.1,GeneID:3192224;gbkey=CDS;product=glycosyl transferase family protein;protein_id=YP_170195.1;transl_table=11
NC_006570.2	RefSeq	gene	1257338	1258669	.	-	.	ID=gene1255;Name=FTT_1238c;Dbxref=GeneID:3192211;gbkey=Gene;locus_tag=FTT_1238c
NC_006570.2	RefSeq	CDS	1257338	1258669	.	-	0	ID=cds1112;Name=YP_170196.1;Parent=gene1255;Note=ORF ftt1238c;Dbxref=UniProtKB%2FTrEMBL:Q5NFJ6,Genbank:YP_170196.1,GeneID:3192211;gbkey=CDS;product=hypothetical protein;protein_id=YP_170196.1;transl_table=11
NC_006570.2	RefSeq	gene	1258877	1260148	.	+	.	ID=gene1256;Name=FTT_1239;Dbxref=GeneID:3192217;gbkey=Gene;locus_tag=FTT_1239
NC_006570.2	RefSeq	CDS	1258877	1260148	.	+	0	ID=cds1113;Name=YP_170197.1;Parent=gene1256;Note=ORF ftt1239;Dbxref=UniProtKB%2FTrEMBL:Q5NFJ5,Genbank:YP_170197.1,GeneID:3192217;gbkey=CDS;product=hypothetical protein;protein_id=YP_170197.1;transl_table=11
NC_006570.2	RefSeq	gene	1260163	1260711	.	-	.	ID=gene1257;Name=FTT_1240c;Dbxref=GeneID:3192214;gbkey=Gene;locus_tag=FTT_1240c
NC_006570.2	RefSeq	CDS	1260163	1260711	.	-	0	ID=cds1114;Name=YP_170198.2;Parent=gene1257;Note=Similar to YJGA_HAEIN %28P45076%29 Hypothetical protein HI1151 from Haemophilus influenzae %28178 aa%29. FASTA: opt: 359 Z-score: 390.6 E%28%29: 7.3e-14 Smith-Waterman score: 359%3B 35.928 identity in 167 aa overlap. ORF ftt1240c;Dbxref=InterPro:IPR006839,UniProtKB%2FTrEMBL:Q5NFJ4,Genbank:YP_170198.2,GeneID:3192214;gbkey=CDS;product=hypothetical protein;protein_id=YP_170198.2;transl_table=11
NC_006570.2	RefSeq	gene	1260815	1262068	.	+	.	ID=gene1258;Name=glyA;Dbxref=GeneID:3191778;gbkey=Gene;gene=glyA;locus_tag=FTT_1241
NC_006570.2	RefSeq	CDS	1260815	1262068	.	+	0	ID=cds1115;Name=YP_170199.1;Parent=gene1258;Note=catalyzes the reaction of glycine with 5%2C10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate;Dbxref=GOA:Q5NFJ3,InterPro:IPR015421,UniProtKB%2FSwiss-Prot:Q5NFJ3,Genbank:YP_170199.1,GeneID:3191778;gbkey=CDS;product=serine hydroxymethyltransferase;protein_id=YP_170199.1;transl_table=11
NC_006570.2	RefSeq	gene	1262350	1263612	.	+	.	ID=gene1259;Name=FTT_1242;Dbxref=GeneID:3192215;gbkey=Gene;locus_tag=FTT_1242
NC_006570.2	RefSeq	CDS	1262350	1263612	.	+	0	ID=cds1116;Name=YP_170200.1;Parent=gene1259;Note=ORF ftt1242;Dbxref=UniProtKB%2FTrEMBL:Q5NFJ2,Genbank:YP_170200.1,GeneID:3192215;gbkey=CDS;product=hypothetical protein;protein_id=YP_170200.1;transl_table=11
NC_006570.2	RefSeq	gene	1263494	1265347	.	-	.	ID=gene1260;Name=mreA;Dbxref=GeneID:3192019;gbkey=Gene;gene=mreA;locus_tag=FTT_1243c
NC_006570.2	RefSeq	CDS	1263494	1265347	.	-	0	ID=cds1117;Name=YP_170201.1;Parent=gene1260;Note=Similar to EAA32028 Hypothetical protein from Neurospora crassa %28567 aa%29. FASTA: opt: 643 Z-score: 759.7 E%28%29: 2e-34 Smith-Waterman score: 793%3B 29.879 identity in 579 aa overlap.;Dbxref=GOA:Q5NFJ1,InterPro:IPR016166,UniProtKB%2FTrEMBL:Q5NFJ1,Genbank:YP_170201.1,GeneID:3192019;gbkey=CDS;product=FAD binding family protein;protein_id=YP_170201.1;transl_table=11
NC_006570.2	RefSeq	gene	1265424	1266248	.	-	.	ID=gene1261;Name=yfiO;Dbxref=GeneID:3192165;gbkey=Gene;gene=yfiO;locus_tag=FTT_1244c
NC_006570.2	RefSeq	CDS	1265424	1266248	.	-	0	ID=cds1118;Name=YP_170202.1;Parent=gene1261;Note=Similar to Q8XYX9 Probable transmembrane protein from Ralstonia solanacearum %28Pseudomonas solanacearum%29 %28289 aa%29. FASTA: opt: 563 Z-score: 689.8 E%28%29: 1.6e-30 Smith-Waterman score: 563%3B 32.558 identity in 258 aa overlap.;Dbxref=GOA:Q5NFJ0,InterPro:IPR019734,UniProtKB%2FTrEMBL:Q5NFJ0,Genbank:YP_170202.1,GeneID:3192165;gbkey=CDS;product=lipoprotein;protein_id=YP_170202.1;transl_table=11
NC_006570.2	RefSeq	gene	1266337	1267335	.	+	.	ID=gene1262;Name=rluD;Dbxref=GeneID:3191615;gbkey=Gene;gene=rluD;locus_tag=FTT_1245
NC_006570.2	RefSeq	CDS	1266337	1267335	.	+	0	ID=cds1119;Name=YP_170203.1;Parent=gene1262;Note=Similar to Q87S65 Ribosomal large subunit pseudouridine from Vibrio parahaemolyticus %28325 aa%29. FASTA: opt: 917 Z-score: 1118.2 E%28%29: 2.2e-54 Smith-Waterman score: 917%3B 47.468 identity in 316 aa overlap.;Dbxref=GOA:Q5NFI9,InterPro:IPR006225,UniProtKB%2FTrEMBL:Q5NFI9,Genbank:YP_170203.1,GeneID:3191615;gbkey=CDS;product=ribosomal large subunit pseudouridine synthase D;protein_id=YP_170203.1;transl_table=11
NC_006570.2	RefSeq	gene	1267277	1268125	.	+	.	ID=gene1263;Name=FTT_1246;Dbxref=GeneID:3192204;gbkey=Gene;locus_tag=FTT_1246
NC_006570.2	RefSeq	CDS	1267277	1268125	.	+	0	ID=cds1120;Name=YP_170204.1;Parent=gene1263;Note=Similar to Q8EEM6 Bax protein%2C  from Shewanella oneidensis %28255 aa%29. FASTA: opt: 369 Z-score: 448.5 E%28%29: 4.3e-17 Smith-Waterman score: 369%3B 31.081 identity in 222 aa overlap. ORF ftt1246;Dbxref=GOA:Q5NFI8,InterPro:IPR002901,UniProtKB%2FTrEMBL:Q5NFI8,Genbank:YP_170204.1,GeneID:3192204;gbkey=CDS;product=hypothetical protein;protein_id=YP_170204.1;transl_table=11
NC_006570.2	RefSeq	gene	1268200	1269300	.	+	.	ID=gene1264;Name=FTT_1247;Dbxref=GeneID:3192202;gbkey=Gene;locus_tag=FTT_1247
NC_006570.2	RefSeq	CDS	1268200	1269300	.	+	0	ID=cds1121;Name=YP_170205.1;Parent=gene1264;Note=Similar to Q9A5X9 ABC transporter%2Cpermease protein%2C  from Caulobacter crescentus.%28371 aa%29. FASTA: opt: 755 Z-score: 860.3 E%28%29: 5e-40 Smith-Waterman score: 755%3B 36.095 identity in 338 aa overlap. ORF ftt1247;Dbxref=InterPro:IPR003453,UniProtKB%2FTrEMBL:Q5NFI7,Genbank:YP_170205.1,GeneID:3192202;gbkey=CDS;product=ABC transporter membrane protein;protein_id=YP_170205.1;transl_table=11
NC_006570.2	RefSeq	gene	1269315	1270076	.	+	.	ID=gene1265;Name=FTT_1248;Dbxref=GeneID:3192198;gbkey=Gene;locus_tag=FTT_1248
NC_006570.2	RefSeq	CDS	1269315	1270076	.	+	0	ID=cds1122;Name=YP_170206.1;Parent=gene1265;Note=Similar to Q83DK2 ABC transporter%2CATP-binding protein from Coxiella burnetii %28268 aa%29. FASTA: opt: 674 Z-score: 783.9 E%28%29: 9e-36 Smith-Waterman score: 674%3B 46.188 identity in 223 aa overlap. ORF ftt1248;Dbxref=GOA:Q5NFI6,InterPro:IPR017871,UniProtKB%2FTrEMBL:Q5NFI6,Genbank:YP_170206.1,GeneID:3192198;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=YP_170206.1;transl_table=11
NC_006570.2	RefSeq	gene	1270086	1270811	.	+	.	ID=gene1266;Name=FTT_1249;Dbxref=GeneID:3192197;gbkey=Gene;locus_tag=FTT_1249
NC_006570.2	RefSeq	CDS	1270086	1270811	.	+	0	ID=cds1123;Name=YP_170207.1;Parent=gene1266;Note=Similar to Q9HZ27 Hypothetical protein PA3213 from Pseudomonas aeruginosa %28312 aa%29. FASTA: opt: 282 Z-score: 315.9 E%28%29: 1.1e-09 Smith-Waterman score: 282%3B 23.661 identity in 224 aa overlap. The archetype %28Rv0169%29 for mce related family proteins%2C was isolated as being necessary for colonization of%2C and survival within%2C the macrophage MEDLINE:93377076. ORF ftt1249;Dbxref=InterPro:IPR003399,UniProtKB%2FTrEMBL:Q5NFI5,Genbank:YP_170207.1,GeneID:3192197;gbkey=CDS;product=cell entry %28mce%29 related family protein;protein_id=YP_170207.1;transl_table=11
NC_006570.2	RefSeq	gene	1270816	1271514	.	+	.	ID=gene1267;Name=FTT_1250;Dbxref=GeneID:3192195;gbkey=Gene;locus_tag=FTT_1250
NC_006570.2	RefSeq	CDS	1270816	1271514	.	+	0	ID=cds1124;Name=YP_170208.1;Parent=gene1267;Note=ORF ftt1250;Dbxref=UniProtKB%2FTrEMBL:Q5NFI4,Genbank:YP_170208.1,GeneID:3192195;gbkey=CDS;product=hypothetical protein;protein_id=YP_170208.1;transl_table=11
NC_006570.2	RefSeq	gene	1271504	1272190	.	-	.	ID=gene1268;Name=FTT_1251c;Dbxref=GeneID:3191080;gbkey=Gene;locus_tag=FTT_1251c
NC_006570.2	RefSeq	CDS	1271504	1272190	.	-	0	ID=cds1125;Name=YP_170209.1;Parent=gene1268;Note=Similar to Q8EDF8 Conserved hypothetical protein from Shewanella oneidensis %28234 aa%29. FASTA: opt: 692 Z-score: 805.5 E%28%29: 5.6e-37 Smith-Waterman score: 692%3B 44.828 identity in 232 aa overlap. ORF ftt1251c;Dbxref=UniProtKB%2FTrEMBL:Q5NFI3,Genbank:YP_170209.1,GeneID:3191080;gbkey=CDS;product=hypothetical protein;protein_id=YP_170209.1;transl_table=11
NC_006570.2	RefSeq	gene	1272261	1272989	.	+	.	ID=gene1269;Name=FTT_1252;Dbxref=GeneID:3192555;gbkey=Gene;locus_tag=FTT_1252
NC_006570.2	RefSeq	CDS	1272261	1272989	.	+	0	ID=cds1126;Name=YP_170210.1;Parent=gene1269;Note=in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA%3B cells lacking this function can grow%2C but are outcompeted by wild-type%3B SAM-dependent m%283%29U1498 methyltransferase;Dbxref=GOA:Q5NFI2,InterPro:IPR006700,UniProtKB%2FTrEMBL:Q5NFI2,Genbank:YP_170210.1,GeneID:3192555;gbkey=CDS;product=16S ribosomal RNA methyltransferase RsmE;protein_id=YP_170210.1;transl_table=11
NC_006570.2	RefSeq	gene	1273219	1274706	.	+	.	ID=gene1270;Name=FTT_1253;Dbxref=GeneID:3191476;gbkey=Gene;locus_tag=FTT_1253
NC_006570.2	RefSeq	CDS	1273219	1274706	.	+	0	ID=cds1127;Name=YP_170211.1;Parent=gene1270;Note=Similar to Q9KTB5 Proton%2Fpeptide symporter family protein from Vibrio cholerae %28514 aa%29. FASTA: opt: 1234 Z-score: 1376.6 E%28%29: 8.7e-69 Smith-Waterman score: 1245%3B 42.050identity in 478 aa overlap. ORF ftt1253;Dbxref=GOA:Q5NFI1,InterPro:IPR005279,UniProtKB%2FTrEMBL:Q5NFI1,Genbank:YP_170211.1,GeneID:3191476;gbkey=CDS;product=proton-dependent oligopeptide transport %28POT%29 family protein;protein_id=YP_170211.1;transl_table=11
NC_006570.2	RefSeq	gene	1274814	1276505	.	+	.	ID=gene1271;Name=fadD1;Dbxref=GeneID:3191870;gbkey=Gene;gene=fadD1;locus_tag=FTT_1254
NC_006570.2	RefSeq	CDS	1274814	1276505	.	+	0	ID=cds1128;Name=YP_170212.1;Parent=gene1271;Note=Similar to Q89UU0 Long-chain-fatty-acid-CoA ligase from Bradyrhizobium japonicum %28561 aa%29. FASTA: opt: 1308 Z-score: 1621.3 E%28%29: 2.1e-82 Smith-Waterman score: 1308%3B 38.324 identity in 561 aa overlap.;Dbxref=GOA:Q5NFI0,InterPro:IPR000873,UniProtKB%2FTrEMBL:Q5NFI0,Genbank:YP_170212.1,GeneID:3191870;gbkey=CDS;product=acyl-CoA synthetase;protein_id=YP_170212.1;transl_table=11
NC_006570.2	RefSeq	gene	1276493	1277341	.	-	.	ID=gene1272;Name=FTT_1255c;Dbxref=GeneID:3191460;gbkey=Gene;locus_tag=FTT_1255c
NC_006570.2	RefSeq	CDS	1276493	1277341	.	-	0	ID=cds1129;Name=YP_170213.1;Parent=gene1272;Note=Similar to Q8PAT1 Transcriptional regulator from Xanthomonas campestris %28pv. campestris%29 %28287 aa%29. FASTA: opt: 689 Z-score: 866.5 E%28%29: 2.3e-40 Smith-Waterman score: 689%3B 37.354identity in 257 aa overlap. ORF ftt1255c;Dbxref=GOA:Q5NFH9,InterPro:IPR018062,UniProtKB%2FTrEMBL:Q5NFH9,Genbank:YP_170213.1,GeneID:3191460;gbkey=CDS;product=AraC family transcriptional regulator;protein_id=YP_170213.1;transl_table=11
NC_006570.2	RefSeq	gene	1277485	1279014	.	+	.	ID=gene1273;Name=emrB;Dbxref=GeneID:3191559;gbkey=Gene;gene=emrB;locus_tag=FTT_1256
NC_006570.2	RefSeq	CDS	1277485	1279014	.	+	0	ID=cds1130;Name=YP_170214.1;Parent=gene1273;Note=Similar to Q83DE1 Drug resistance transporter%2C EmrB%2FQacA family from Coxiella burnetii %28526 aa%29. FASTA: opt: 1037 Z-score: 1145.4 E%28%29: 6.6e-56 Smith-Waterman score: 1037%3B 31.928 identity in 498 aa overlap.;Dbxref=GOA:Q5NFH8,InterPro:IPR011701,UniProtKB%2FTrEMBL:Q5NFH8,Genbank:YP_170214.1,GeneID:3191559;gbkey=CDS;product=major facilitator transporter;protein_id=YP_170214.1;transl_table=11
NC_006570.2	RefSeq	gene	1279036	1280058	.	+	.	ID=gene1274;Name=emrA1;Dbxref=GeneID:3192360;gbkey=Gene;gene=emrA1;locus_tag=FTT_1257
NC_006570.2	RefSeq	CDS	1279036	1280058	.	+	0	ID=cds1131;Name=YP_170215.1;Parent=gene1274;Note=Similar to Q83DE0 Multidrug resistance protein from Coxiella burnetii %28331 aa%29. FASTA: opt: 742 Z-score: 834.3 E%28%29: 1.4e-38 Smith-Waterman score: 742%3B 37.695 identity in 321 aa overlap.;Dbxref=GOA:Q5NFH7,InterPro:IPR006143,UniProtKB%2FTrEMBL:Q5NFH7,Genbank:YP_170215.1,GeneID:3192360;gbkey=CDS;product=HlyD family secretion protein;protein_id=YP_170215.1;transl_table=11
NC_006570.2	RefSeq	gene	1280068	1281540	.	+	.	ID=gene1275;Name=FTT_1258;Dbxref=GeneID:3191474;gbkey=Gene;locus_tag=FTT_1258
NC_006570.2	RefSeq	CDS	1280068	1281540	.	+	0	ID=cds1132;Name=YP_170216.1;Parent=gene1275;Note=Similar to Q93NK3  outer membrane protein from Pseudomonas syringae %28pv. syringae%29 %28475 aa%29. FASTA: opt: 594 Z-score: 697.2 E%28%29: 6e-31 Smith-Waterman score: 594%3B 28.970 identity in 466 aa overlap. ORF ftt1258;Dbxref=GOA:Q5NFH6,InterPro:IPR003423,UniProtKB%2FTrEMBL:Q5NFH6,Genbank:YP_170216.1,GeneID:3191474;gbkey=CDS;product=outer membrane efflux protein;protein_id=YP_170216.1;transl_table=11
NC_006570.2	RefSeq	gene	1281669	1282418	.	+	.	ID=gene1276;Name=nadE;Dbxref=GeneID:3190905;gbkey=Gene;gene=nadE;locus_tag=FTT_1259
NC_006570.2	RefSeq	CDS	1281669	1282418	.	+	0	ID=cds1133;Name=YP_170217.1;Parent=gene1276;Note=Similar to NADE_MYCPN %28P75216%29 Probable NH%283%29-dependent NAD%28%2B%29 synthetase Mycoplasma pneumoniae %28248 aa%29. FASTA: opt: 601 Z-score: 760.1 E%28%29: 1.9e-34 Smith-Waterman score: 601%3B 40.928identity in 237 aa overlap.;Dbxref=GOA:Q5NFH5,InterPro:IPR014729,UniProtKB%2FTrEMBL:Q5NFH5,Genbank:YP_170217.1,GeneID:3190905;gbkey=CDS;product=NH%283%29-dependent NAD%28%2B%29 synthetase;protein_id=YP_170217.1;transl_table=11
NC_006570.2	RefSeq	gene	1282522	1282944	.	+	.	ID=gene1277;Name=FTT_1260;Dbxref=GeneID:3191472;gbkey=Gene;locus_tag=FTT_1260
NC_006570.2	RefSeq	CDS	1282522	1282944	.	+	0	ID=cds1134;Name=YP_170218.1;Parent=gene1277;Note=ORF ftt1260;Dbxref=UniProtKB%2FTrEMBL:Q5NFH4,Genbank:YP_170218.1,GeneID:3191472;gbkey=CDS;product=hypothetical protein;protein_id=YP_170218.1;transl_table=11
NC_006570.2	RefSeq	gene	1283043	1283614	.	-	.	ID=gene1278;Name=FTT_1261c;Dbxref=GeneID:3191468;gbkey=Gene;locus_tag=FTT_1261c;pseudo=true
NC_006570.2	RefSeq	repeat_region	1283645	1283656	.	+	.	ID=id164;Note=ISFtu1 12bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	1283657	1283672	.	+	.	ID=id165;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	1283673	1283688	.	+	.	ID=id166;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	1283689	1283704	.	+	.	ID=id167;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	1283705	1283720	.	+	.	ID=id168;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	1283721	1283736	.	+	.	ID=id169;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	1283737	1283752	.	+	.	ID=id170;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	1283753	1283768	.	+	.	ID=id171;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	1283769	1283784	.	+	.	ID=id172;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	1283785	1283800	.	+	.	ID=id173;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	1283801	1283816	.	+	.	ID=id174;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	1283817	1283832	.	+	.	ID=id175;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	1283833	1283848	.	+	.	ID=id176;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	1283849	1283864	.	+	.	ID=id177;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	1283865	1283880	.	+	.	ID=id178;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	1283881	1283896	.	+	.	ID=id179;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	1283897	1283912	.	+	.	ID=id180;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	1283913	1283928	.	+	.	ID=id181;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	1283929	1283944	.	+	.	ID=id182;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;gbkey=repeat_region
NC_006570.2	RefSeq	gene	1283965	1284749	.	+	.	ID=gene1279;Name=isftu1;Dbxref=GeneID:3190916;gbkey=Gene;gene=isftu1;locus_tag=FTT_1262
NC_006570.2	RefSeq	CDS	1283965	1284291	.	+	0	ID=cds1135;Name=YP_170219.1;Parent=gene1279;Note=ISFtu1. Transposase%2C member of the IS630 Tc-1 mariner family. Identical to Q93EJ6  transposase from Francisella tularensis %28118 aa%29 from aa 144-261. Identical to Q93EJ7  transposase from Francisella tularensis %28126 aa%29 from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF%27s. ORF1 %28identical to Q93EJ7%29 contains a programmed ribosomal frameshifting motif%2C 5%27-AAAAAAAG-3%27 at aa position 109 which permits frameshifting to ORF2 %28identical to Q93EJ6%29 to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family%2C and also mariner elements%2C show that this transposase shares strongly conserved residues%2C including a fully conserved dipeptide%2CAsp-Glu %28DE%29%2C and a block consisting of a fully conserved Asp and highly conserved Glu%2C separated by 34 or 35 residues %28D35E%29. The conserved dipeptide is only present if ribosomal frameshifting occurs.;Dbxref=UniProtKB%2FTrEMBL:Q5NIH2,Genbank:YP_170219.1,GeneID:3190916;gbkey=CDS;product=transposase;protein_id=YP_170219.1;transl_table=11
NC_006570.2	RefSeq	CDS	1284291	1284749	.	+	0	ID=cds1135;Name=YP_170219.1;Parent=gene1279;Note=ISFtu1. Transposase%2C member of the IS630 Tc-1 mariner family. Identical to Q93EJ6  transposase from Francisella tularensis %28118 aa%29 from aa 144-261. Identical to Q93EJ7  transposase from Francisella tularensis %28126 aa%29 from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF%27s. ORF1 %28identical to Q93EJ7%29 contains a programmed ribosomal frameshifting motif%2C 5%27-AAAAAAAG-3%27 at aa position 109 which permits frameshifting to ORF2 %28identical to Q93EJ6%29 to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family%2C and also mariner elements%2C show that this transposase shares strongly conserved residues%2C including a fully conserved dipeptide%2CAsp-Glu %28DE%29%2C and a block consisting of a fully conserved Asp and highly conserved Glu%2C separated by 34 or 35 residues %28D35E%29. The conserved dipeptide is only present if ribosomal frameshifting occurs.;Dbxref=UniProtKB%2FTrEMBL:Q5NIH2,Genbank:YP_170219.1,GeneID:3190916;gbkey=CDS;product=transposase;protein_id=YP_170219.1;transl_table=11
NC_006570.2	RefSeq	repeat_region	1284837	1284848	.	+	.	ID=id183;Note=ISFtu1 12bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	gene	1285041	1286036	.	-	.	ID=gene1280;Name=FTT_1263c;Dbxref=GeneID:3191465;gbkey=Gene;locus_tag=FTT_1263c
NC_006570.2	RefSeq	CDS	1285041	1286036	.	-	0	ID=cds1136;Name=YP_170220.1;Parent=gene1280;Note=Duplicate of FTT0354 and FTT0378. ORF ftt1263c;Dbxref=InterPro:IPR007577,UniProtKB%2FTrEMBL:Q5NHR8,Genbank:YP_170220.1,GeneID:3191465;gbkey=CDS;product=hypothetical protein;protein_id=YP_170220.1;transl_table=11
NC_006570.2	RefSeq	gene	1286406	1286891	.	+	.	ID=gene1281;Name=isftu2;Dbxref=GeneID:3191480;gbkey=Gene;gene=isftu2;locus_tag=FTT_1264;pseudo=true
NC_006570.2	RefSeq	repeat_region	1286866	1286877	.	-	.	ID=id184;Note=ISFtu1 12bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	gene	1286965	1287749	.	-	.	ID=gene1282;Name=isftu1;Dbxref=GeneID:3190884;gbkey=Gene;gene=isftu1;locus_tag=FTT_1265c
NC_006570.2	RefSeq	CDS	1287423	1287749	.	-	0	ID=cds1137;Name=YP_170221.1;Parent=gene1282;Note=ISFtu1. Transposase%2C member of the IS630 Tc-1 mariner family. Identical to Q93EJ6  transposase from Francisella tularensis %28118 aa%29 from aa 144-261. Identical to Q93EJ7  transposase from Francisella tularensis %28126 aa%29 from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF%27s. ORF1 %28identical to Q93EJ7%29 contains a programmed ribosomal frameshifting motif%2C 5%27-AAAAAAAG-3%27 at aa position 109 which permits frameshifting to ORF2 %28identical to Q93EJ6%29 to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family%2C and also mariner elements%2C show that this transposase shares strongly conserved residues%2C including a fully conserved dipeptide%2CAsp-Glu %28DE%29%2C and a block consisting of a fully conserved Asp and highly conserved Glu%2C separated by 34 or 35 residues %28D35E%29. The conserved dipeptide is only present if ribosomal frameshifting occurs.;Dbxref=UniProtKB%2FTrEMBL:Q5NIH2,Genbank:YP_170221.1,GeneID:3190884;gbkey=CDS;product=transposase;protein_id=YP_170221.1;transl_table=11
NC_006570.2	RefSeq	CDS	1286965	1287423	.	-	0	ID=cds1137;Name=YP_170221.1;Parent=gene1282;Note=ISFtu1. Transposase%2C member of the IS630 Tc-1 mariner family. Identical to Q93EJ6  transposase from Francisella tularensis %28118 aa%29 from aa 144-261. Identical to Q93EJ7  transposase from Francisella tularensis %28126 aa%29 from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF%27s. ORF1 %28identical to Q93EJ7%29 contains a programmed ribosomal frameshifting motif%2C 5%27-AAAAAAAG-3%27 at aa position 109 which permits frameshifting to ORF2 %28identical to Q93EJ6%29 to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family%2C and also mariner elements%2C show that this transposase shares strongly conserved residues%2C including a fully conserved dipeptide%2CAsp-Glu %28DE%29%2C and a block consisting of a fully conserved Asp and highly conserved Glu%2C separated by 34 or 35 residues %28D35E%29. The conserved dipeptide is only present if ribosomal frameshifting occurs.;Dbxref=UniProtKB%2FTrEMBL:Q5NIH2,Genbank:YP_170221.1,GeneID:3190884;gbkey=CDS;product=transposase;protein_id=YP_170221.1;transl_table=11
NC_006570.2	RefSeq	repeat_region	1287770	1287785	.	-	.	ID=id185;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;gbkey=repeat_region
NC_006570.2	RefSeq	gene	1287773	1288486	.	-	.	ID=gene1283;Name=yhhW;Dbxref=GeneID:3191272;gbkey=Gene;gene=yhhW;locus_tag=FTT_1266c
NC_006570.2	RefSeq	CDS	1287773	1288486	.	-	0	ID=cds1138;Name=YP_170222.1;Parent=gene1283;Note=Similar to YC10_PSEAE %28Q9I4C8%29 Hypothetical protein PA1210 from Pseudomonas aeruginosa %28232 aa%29. FASTA: opt: 602 Z-score: 765.5 E%28%29: 9.5e-35 Smith-Waterman score: 602%3B 41.667 identity in 228 aa overlap. This CDS is disrupted by the insertion of an ISFtu1 element occurring very near the C-terminal end. It is not clear whether this insertion affects the function of the protein.;Dbxref=InterPro:IPR012093,UniProtKB%2FTrEMBL:Q5NFH0,Genbank:YP_170222.1,GeneID:3191272;gbkey=CDS;product=pirin;protein_id=YP_170222.1;transl_table=11
NC_006570.2	RefSeq	repeat_region	1287786	1287801	.	-	.	ID=id186;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;Dbxref=GeneID:3191272;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	1287802	1287813	.	-	.	ID=id187;Note=ISFtu1 12bp terminal inverted repeat;Dbxref=GeneID:3191272;gbkey=repeat_region
NC_006570.2	RefSeq	gene	1288586	1289482	.	+	.	ID=gene1284;Name=FTT_1267;Dbxref=GeneID:3191463;gbkey=Gene;locus_tag=FTT_1267
NC_006570.2	RefSeq	CDS	1288586	1289482	.	+	0	ID=cds1139;Name=YP_170223.1;Parent=gene1284;Note=Similar to Q8E7Z8 Transcriptional regulator%2C LysR family from Shewanella oneidensis %28289 aa%29. FASTA: opt: 561 Z-score: 683.5 E%28%29: 3.5e-30 Smith-Waterman score: 561%3B 32.423identity in 293 aa overlap. ORF ftt1267;Dbxref=GOA:Q5NFG9,InterPro:IPR011991,UniProtKB%2FTrEMBL:Q5NFG9,Genbank:YP_170223.1,GeneID:3191463;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=YP_170223.1;transl_table=11
NC_006570.2	RefSeq	gene	1289496	1290620	.	-	.	ID=gene1285;Name=dnaJ1;Dbxref=GeneID:3191529;gbkey=Gene;gene=dnaJ1;locus_tag=FTT_1268c
NC_006570.2	RefSeq	CDS	1289496	1290620	.	-	0	ID=cds1140;Name=YP_170224.1;Parent=gene1285;Note=chaperone Hsp40%3B co-chaperone with DnaK%3B Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins%2C also in an autonomous%2C dnaK-independent fashion;Dbxref=GOA:Q5NFG8,InterPro:IPR018253,UniProtKB%2FSwiss-Prot:Q5NFG8,Genbank:YP_170224.1,GeneID:3191529;gbkey=CDS;product=molecular chaperone DnaJ;protein_id=YP_170224.1;transl_table=11
NC_006570.2	RefSeq	gene	1290709	1292637	.	-	.	ID=gene1286;Name=dnaK;Dbxref=GeneID:3191531;gbkey=Gene;gene=dnaK;locus_tag=FTT_1269c
NC_006570.2	RefSeq	CDS	1290709	1292637	.	-	0	ID=cds1141;Name=YP_170225.1;Parent=gene1286;Note=heat shock protein 70%3B assists in folding of nascent polypeptide chains%3B refolding of misfolded proteins%3B utilizes ATPase activity to help fold%3B co-chaperones are DnaJ and GrpE%3B multiple copies in some bacteria;Dbxref=GOA:Q5NFG7,InterPro:IPR018181,UniProtKB%2FSwiss-Prot:Q5NFG7,Genbank:YP_170225.1,GeneID:3191531;gbkey=CDS;product=molecular chaperone DnaK;protein_id=YP_170225.1;transl_table=11
NC_006570.2	RefSeq	gene	1292738	1293325	.	-	.	ID=gene1287;Name=grpE;Dbxref=GeneID:3191601;gbkey=Gene;gene=grpE;locus_tag=FTT_1270c
NC_006570.2	RefSeq	CDS	1292738	1293325	.	-	0	ID=cds1142;Name=YP_170226.1;Parent=gene1287;Note=with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins%3B may act as a thermosensor;Dbxref=GOA:Q5NFG6,InterPro:IPR013805,UniProtKB%2FSwiss-Prot:Q5NFG6,Genbank:YP_170226.1,GeneID:3191601;gbkey=CDS;product=heat shock protein GrpE;protein_id=YP_170226.1;transl_table=11
NC_006570.2	RefSeq	gene	1293414	1294580	.	+	.	ID=gene1288;Name=mltA;Dbxref=GeneID:3191995;gbkey=Gene;gene=mltA;locus_tag=FTT_1271
NC_006570.2	RefSeq	CDS	1293414	1294580	.	+	0	ID=cds1143;Name=YP_170227.1;Parent=gene1288;Note=Similar to Q81ZZ6  membrane-bound lytic murein transglycosylase A transmembrane protein from Nitrosomonas europaea %28440 aa%29. FASTA: opt: 821 Z-score: 989.7 E%28%29: 3.1e-47 Smith-Waterman score: 821%3B 39.769 identity in 347 aa overlap.;Dbxref=GOA:Q5NFG5,InterPro:IPR010611,UniProtKB%2FTrEMBL:Q5NFG5,Genbank:YP_170227.1,GeneID:3191995;gbkey=CDS;product=membrane-bound lytic murein transglycosylase A %28MLT%29 family protein;protein_id=YP_170227.1;transl_table=11
NC_006570.2	RefSeq	gene	1294573	1295757	.	+	.	ID=gene1289;Name=FTT_1272;Dbxref=GeneID:3191462;gbkey=Gene;locus_tag=FTT_1272
NC_006570.2	RefSeq	CDS	1294573	1295757	.	+	0	ID=cds1144;Name=YP_170228.1;Parent=gene1289;Note=Similar to Q8KB91 Protoporphyrinogen oxidase%2C  from Chlorobium tepidum %28399 aa%29. FASTA: opt: 594 Z-score: 698.0 E%28%29: 5.5e-31 Smith-Waterman score: 673%3B 31.552 identity in 393 aa overlap. ORF ftt1272;Dbxref=GOA:Q5NFG4,InterPro:IPR002937,UniProtKB%2FTrEMBL:Q5NFG4,Genbank:YP_170228.1,GeneID:3191462;gbkey=CDS;product=hypothetical protein;protein_id=YP_170228.1;transl_table=11
NC_006570.2	RefSeq	gene	1295869	1296324	.	+	.	ID=gene1290;Name=rplM;Dbxref=GeneID:3192012;gbkey=Gene;gene=rplM;locus_tag=FTT_1273
NC_006570.2	RefSeq	CDS	1295869	1296324	.	+	0	ID=cds1145;Name=YP_170229.3;Parent=gene1290;Note=in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit;Dbxref=GOA:Q5NFG3,InterPro:IPR005823,UniProtKB%2FTrEMBL:Q5NFG3,Genbank:YP_170229.3,GeneID:3192012;gbkey=CDS;product=50S ribosomal protein L13;protein_id=YP_170229.3;transl_table=11
NC_006570.2	RefSeq	gene	1296340	1296729	.	+	.	ID=gene1291;Name=rpsI;Dbxref=GeneID:3192545;gbkey=Gene;gene=rpsI;locus_tag=FTT_1274
NC_006570.2	RefSeq	CDS	1296340	1296729	.	+	0	ID=cds1146;Name=YP_170230.2;Parent=gene1291;Note=forms a direct contact with the tRNA during translation;Dbxref=GOA:Q5NFG2,InterPro:IPR014721,UniProtKB%2FTrEMBL:Q5NFG2,Genbank:YP_170230.2,GeneID:3192545;gbkey=CDS;product=30S ribosomal protein S9;protein_id=YP_170230.2;transl_table=11
NC_006570.2	RefSeq	gene	1296789	1297406	.	+	.	ID=gene1292;Name=mglA;Dbxref=GeneID:3192495;gbkey=Gene;gene=mglA;locus_tag=FTT_1275
NC_006570.2	RefSeq	CDS	1296789	1297406	.	+	0	ID=cds1147;Name=YP_170231.1;Parent=gene1292;Note=Similar to O52734 Macrophage growth locus A from Francisella novicida strain U112 %28205 aa%29. FASTA: opt: 1275 Z-score: 1587.7 E%28%29: 1.5e-80 Smith-Waterman score: 1275%3B 99.512 identity in 205 aa overlap %281-205:1-205%29.;Dbxref=InterPro:IPR012335,UniProtKB%2FTrEMBL:Q5NFG1,Genbank:YP_170231.1,GeneID:3192495;gbkey=CDS;product=macrophage growth locus subunit A;protein_id=YP_170231.1;transl_table=11
NC_006570.2	RefSeq	gene	1297408	1297815	.	+	.	ID=gene1293;Name=mglB;Dbxref=GeneID:3191082;gbkey=Gene;gene=mglB;locus_tag=FTT_1276
NC_006570.2	RefSeq	CDS	1297408	1297815	.	+	0	ID=cds1148;Name=YP_170232.1;Parent=gene1293;Note=Identical to O52735 Macrophage growth locus B from Francisella novicida strain U112 %28135 aa%29.;Dbxref=InterPro:IPR007481,UniProtKB%2FTrEMBL:Q5NFG0,Genbank:YP_170232.1,GeneID:3191082;gbkey=CDS;product=ClpXP protease specificity-enhancing factor;protein_id=YP_170232.1;transl_table=11
NC_006570.2	RefSeq	gene	1297812	1299083	.	-	.	ID=gene1294;Name=FTT_1277c;Dbxref=GeneID:3191458;gbkey=Gene;locus_tag=FTT_1277c
NC_006570.2	RefSeq	CDS	1297812	1299083	.	-	0	ID=cds1149;Name=YP_170233.1;Parent=gene1294;Note=Similar to Q88EE1 Sodium-solute symporter%2C  from Pseudomonas putida %28strain KT2440%29 %28459 aa%29. FASTA: opt: 279 Z-score: 311.8 E%28%29: 1.8e-09 Smith-Waterman score: 300%3B 20.863identity in 417 aa overlap. ORF ftt1277c;Dbxref=GOA:Q5NFF9,InterPro:IPR001734,UniProtKB%2FTrEMBL:Q5NFF9,Genbank:YP_170233.1,GeneID:3191458;gbkey=CDS;product=Sodium-solute symporter family protein;protein_id=YP_170233.1;transl_table=11
NC_006570.2	RefSeq	gene	1299076	1299639	.	-	.	ID=gene1295;Name=rnhB;Dbxref=GeneID:3191604;gbkey=Gene;gene=rnhB;locus_tag=FTT_1278c
NC_006570.2	RefSeq	CDS	1299076	1299639	.	-	0	ID=cds1150;Name=YP_170234.1;Parent=gene1295;Note=RNH2%3B RNase HII%3B binds manganese%3B endonuclease which specifically degrades the RNA of RNA-DNA hybrids;Dbxref=GOA:Q5NFF8,InterPro:IPR001352,UniProtKB%2FSwiss-Prot:Q5NFF8,Genbank:YP_170234.1,GeneID:3191604;gbkey=CDS;product=ribonuclease HII;protein_id=YP_170234.1;transl_table=11
NC_006570.2	RefSeq	gene	1299641	1300384	.	-	.	ID=gene1296;Name=yfhQ;Dbxref=GeneID:3192166;gbkey=Gene;gene=yfhQ;locus_tag=FTT_1279c
NC_006570.2	RefSeq	CDS	1299641	1300384	.	-	0	ID=cds1151;Name=YP_170235.1;Parent=gene1296;Note=Similar to Q8ZCR9  SpoU-family rRNA methylase from Yersinia pestis %28257 aa%29. FASTA: opt: 688 Z-score: 847.8 E%28%29: 2.5e-39 Smith-Waterman score: 688%3B 47.755 identity in 245 aa overlap.;Dbxref=GOA:Q5NFF7,InterPro:IPR004384,UniProtKB%2FTrEMBL:Q5NFF7,Genbank:YP_170235.1,GeneID:3192166;gbkey=CDS;product=SpoU rRNA methylase family protein;protein_id=YP_170235.1;transl_table=11
NC_006570.2	RefSeq	gene	1300377	1300832	.	-	.	ID=gene1297;Name=ptsN;Dbxref=GeneID:3191252;gbkey=Gene;gene=ptsN;locus_tag=FTT_1280c
NC_006570.2	RefSeq	CDS	1300377	1300832	.	-	0	ID=cds1152;Name=YP_170236.1;Parent=gene1297;Note=Similar to Q88PA0 Phosphotransferase system%2C nitrogen regulatory IIA protein from Pseudomonas putida %28strain KT2440%29 %28154 aa%29. FASTA: opt: 239 Z-score: 318.2 E%28%29: 7.8e-10 Smith-Waterman score: 239%3B 26.316identity in 152 aa overlap.;Dbxref=GOA:Q5NFF6,InterPro:IPR002178,UniProtKB%2FTrEMBL:Q5NFF6,Genbank:YP_170236.1,GeneID:3191252;gbkey=CDS;product=PEP-dependent sugar PTS system family protein;protein_id=YP_170236.1;transl_table=11
NC_006570.2	RefSeq	gene	1300869	1301165	.	-	.	ID=gene1298;Name=yhbH;Dbxref=GeneID:3191268;gbkey=Gene;gene=yhbH;locus_tag=FTT_1281c
NC_006570.2	RefSeq	CDS	1300869	1301165	.	-	0	ID=cds1153;Name=YP_170237.1;Parent=gene1298;Note=Similar to RP5M_PSEPK %28P15592%29 Probable sigma%2854%29 modulation protein from Pseudomonas putida %28102 aa%29. FASTA: opt: 336 Z-score: 439.6 E%28%29: 1.4e-16 Smith-Waterman score: 336%3B 54.839 identity in 93 aa overlap.;Dbxref=GOA:Q5NFF5,InterPro:IPR003489,UniProtKB%2FTrEMBL:Q5NFF5,Genbank:YP_170237.1,GeneID:3191268;gbkey=CDS;product=sigma-54 modulation protein;protein_id=YP_170237.1;transl_table=11
NC_006570.2	RefSeq	gene	1301284	1301529	.	+	.	ID=gene1299;Name=FTT_1282;Dbxref=GeneID:3191455;gbkey=Gene;locus_tag=FTT_1282
NC_006570.2	RefSeq	CDS	1301284	1301529	.	+	0	ID=cds1154;Name=YP_170238.1;Parent=gene1299;Note=ORF ftt1282;Dbxref=UniProtKB%2FTrEMBL:Q5NFF4,Genbank:YP_170238.1,GeneID:3191455;gbkey=CDS;product=hypothetical protein;protein_id=YP_170238.1;transl_table=11
NC_006570.2	RefSeq	gene	1301535	1302887	.	+	.	ID=gene1300;Name=trmE;Dbxref=GeneID:3192196;gbkey=Gene;gene=trmE;locus_tag=FTT_1283
NC_006570.2	RefSeq	CDS	1301535	1302887	.	+	0	ID=cds1155;Name=YP_170239.1;Parent=gene1300;Note=in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine%2C which is found in the wobble position of some tRNAs and affects ribosomal frameshifting%3B shows potassium-dependent dimerization and GTP hydrolysis%3B also involved in regulation of glutamate-dependent acid resistance and activation of gadE;Dbxref=GOA:Q5NFF3,InterPro:IPR018948,UniProtKB%2FSwiss-Prot:Q5NFF3,Genbank:YP_170239.1,GeneID:3192196;gbkey=CDS;product=tRNA modification GTPase TrmE;protein_id=YP_170239.1;transl_table=11
NC_006570.2	RefSeq	gene	1302897	1303091	.	-	.	ID=gene1301;Name=FTT_1284c;Dbxref=GeneID:3190792;gbkey=Gene;locus_tag=FTT_1284c
NC_006570.2	RefSeq	CDS	1302897	1303091	.	-	0	ID=cds1156;Name=YP_170240.1;Parent=gene1301;Note=ORF ftt1284c;Dbxref=UniProtKB%2FTrEMBL:Q5NFF2,Genbank:YP_170240.1,GeneID:3190792;gbkey=CDS;product=hypothetical protein;protein_id=YP_170240.1;transl_table=11
NC_006570.2	RefSeq	gene	1303123	1304013	.	-	.	ID=gene1302;Name=FTT_1285c;Dbxref=GeneID:3190789;gbkey=Gene;locus_tag=FTT_1285c
NC_006570.2	RefSeq	CDS	1303123	1304013	.	-	0	ID=cds1157;Name=YP_170241.1;Parent=gene1302;Note=Similar to Q8D448 Transcriptional regulator from Vibrio vulnificus %28303 aa%29. FASTA: opt: 372 Z-score: 436.1 E%28%29: 2.1e-16 Smith-Waterman score: 372%3B 28.571 identity in 294 aa overlap. ORF ftt1285c;Dbxref=GOA:Q5NFF1,InterPro:IPR011991,UniProtKB%2FTrEMBL:Q5NFF1,Genbank:YP_170241.1,GeneID:3190789;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=YP_170241.1;transl_table=11
NC_006570.2	RefSeq	gene	1304148	1305203	.	+	.	ID=gene1303;Name=FTT_1286;Dbxref=GeneID:3191090;gbkey=Gene;locus_tag=FTT_1286;pseudo=true
NC_006570.2	RefSeq	gene	1305421	1306344	.	+	.	ID=gene1304;Name=cbs;Dbxref=GeneID:3191274;gbkey=Gene;gene=cbs;locus_tag=FTT_1287
NC_006570.2	RefSeq	CDS	1305421	1306344	.	+	0	ID=cds1158;Name=YP_170242.1;Parent=gene1304;Note=Similar to Q9BH24 Cystathionine beta-synthase 5 from Trypanosoma cruzi %28384 aa%29. FASTA: opt: 540 Z-score: 651.0 E%28%29: 2.3e-28 Smith-Waterman score: 542%3B 31.494 identity in 308 aa overlap.;Dbxref=GOA:Q5NFF0,InterPro:IPR001926,UniProtKB%2FTrEMBL:Q5NFF0,Genbank:YP_170242.1,GeneID:3191274;gbkey=CDS;product=cystathionine beta-synthase;protein_id=YP_170242.1;transl_table=11
NC_006570.2	RefSeq	gene	1306598	1307167	.	+	.	ID=gene1305;Name=FTT_1288;Dbxref=GeneID:3191091;gbkey=Gene;locus_tag=FTT_1288
NC_006570.2	RefSeq	CDS	1306598	1307167	.	+	0	ID=cds1159;Name=YP_170243.1;Parent=gene1305;Note=Similar to Q8Z651  membrane protein from Salmonella typhi %28204 aa%29. FASTA: opt: 462 Z-score: 553.9 E%28%29: 5.9e-23 Smith-Waterman score: 462%3B 36.667 identity in 180 aa overlap. ORF ftt1288;Dbxref=UniProtKB%2FTrEMBL:Q5NFE9,Genbank:YP_170243.1,GeneID:3191091;gbkey=CDS;product=hypothetical protein;protein_id=YP_170243.1;transl_table=11
NC_006570.2	RefSeq	gene	1307547	1307661	.	-	.	ID=gene1306;Name=5S rRNA;Dbxref=GeneID:8303707;description=5S rRNA;gbkey=Gene;gene=5S rRNA;locus_tag=FTT_r02
NC_006570.2	RefSeq	rRNA	1307547	1307661	.	-	.	ID=rna18;Parent=gene1306;Note=uncertain boundries;Dbxref=GeneID:8303707;gbkey=rRNA;product=5S ribosomal RNA
NC_006570.2	RefSeq	exon	1307547	1307661	.	-	.	ID=id188;Parent=rna18;Note=uncertain boundries;Dbxref=GeneID:8303707;gbkey=rRNA;product=5S ribosomal RNA
NC_006570.2	RefSeq	gene	1307712	1310573	.	-	.	ID=gene1307;Name=23S rRNA;Dbxref=GeneID:3190909;description=23S rRNA;gbkey=Gene;gene=23S rRNA;locus_tag=FTT_r03
NC_006570.2	RefSeq	rRNA	1307712	1310573	.	-	.	ID=rna19;Parent=gene1307;Note=uncertain boundries;Dbxref=GeneID:3190909;gbkey=rRNA;product=23S ribosomal RNA
NC_006570.2	RefSeq	exon	1307712	1310573	.	-	.	ID=id189;Parent=rna19;Note=uncertain boundries;Dbxref=GeneID:3190909;gbkey=rRNA;product=23S ribosomal RNA
NC_006570.2	RefSeq	gene	1310648	1310723	.	-	.	ID=gene1308;Name=tRNA-Ala %28TGC%29;Dbxref=GeneID:8303690;description=tRNA-Ala %28TGC%29;gbkey=Gene;gene=tRNA-Ala %28TGC%29;locus_tag=FTT_t18
NC_006570.2	RefSeq	tRNA	1310648	1310723	.	-	.	ID=rna20;Dbxref=GeneID:8303690;codons=54;gbkey=tRNA;product=tRNA-Ala
NC_006570.2	RefSeq	exon	1310648	1310723	.	-	.	ID=id190;Parent=rna20;Dbxref=GeneID:8303690;codons=54;gbkey=tRNA;product=tRNA-Ala
NC_006570.2	RefSeq	gene	1310741	1310814	.	-	.	ID=gene1309;Name=tRNA-Ile %28GAT%29;Dbxref=GeneID:8303711;description=tRNA-Ile %28GAT%29;gbkey=Gene;gene=tRNA-Ile %28GAT%29;locus_tag=FTT_t19
NC_006570.2	RefSeq	tRNA	1310741	1310814	.	-	.	ID=rna21;Dbxref=GeneID:8303711;codons=33;gbkey=tRNA;product=tRNA-Ile
NC_006570.2	RefSeq	exon	1310741	1310814	.	-	.	ID=id191;Parent=rna21;Dbxref=GeneID:8303711;codons=33;gbkey=tRNA;product=tRNA-Ile
NC_006570.2	RefSeq	gene	1310909	1312431	.	-	.	ID=gene1310;Name=16S rRNA;Dbxref=GeneID:3192533;description=16S rRNA;gbkey=Gene;gene=16S rRNA;locus_tag=FTT_r04
NC_006570.2	RefSeq	rRNA	1310909	1312431	.	-	.	ID=rna22;Parent=gene1310;Note=uncertain boundries;Dbxref=GeneID:3192533;gbkey=rRNA;product=16S ribosomal RNA
NC_006570.2	RefSeq	exon	1310909	1312431	.	-	.	ID=id192;Parent=rna22;Note=uncertain boundries;Dbxref=GeneID:3192533;gbkey=rRNA;product=16S ribosomal RNA
NC_006570.2	RefSeq	gene	1313034	1313455	.	+	.	ID=gene1311;Name=FTT_1289;Dbxref=GeneID:8303689;gbkey=Gene;locus_tag=FTT_1289;pseudo=true
NC_006570.2	RefSeq	region	1313034	1313455	.	+	.	ID=id193;Note=Similar to Q9KQ90 Hypothetical protein VC2111 from Vibrio cholerae %28175 aa%29. FASTA: opt: 309 Z-score: 410.6 E%28%29: 5.6e-15 Smith-Waterman score: 309%3B 41.912 identity in 136 aa overlap. ORF ftt1289;Dbxref=InterPro:IPR005025,PSEUDO:CAG45922.2,UniProtKB%2FTrEMBL:Q5NFE8,GeneID:8303689;gbkey=misc_feature
NC_006570.2	RefSeq	gene	1313653	1313728	.	-	.	ID=gene1312;Name=tRNA-Val %28TAC%29;Dbxref=GeneID:8303708;description=tRNA-Val %28TAC%29;gbkey=Gene;gene=tRNA-Val %28TAC%29;locus_tag=FTT_t20
NC_006570.2	RefSeq	tRNA	1313653	1313728	.	-	.	ID=rna23;Dbxref=GeneID:8303708;codons=50;gbkey=tRNA;product=tRNA-Val
NC_006570.2	RefSeq	exon	1313653	1313728	.	-	.	ID=id194;Parent=rna23;Dbxref=GeneID:8303708;codons=50;gbkey=tRNA;product=tRNA-Val
NC_006570.2	RefSeq	gene	1313756	1313847	.	-	.	ID=gene1313;Name=tRNA-Ser %28GCT%29;Dbxref=GeneID:8303718;description=tRNA-Ser %28GCT%29;gbkey=Gene;gene=tRNA-Ser %28GCT%29;locus_tag=FTT_t21
NC_006570.2	RefSeq	tRNA	1313756	1313847	.	-	.	ID=rna24;Dbxref=GeneID:8303718;codons=45;gbkey=tRNA;product=tRNA-Ser
NC_006570.2	RefSeq	exon	1313756	1313847	.	-	.	ID=id195;Parent=rna24;Dbxref=GeneID:8303718;codons=45;gbkey=tRNA;product=tRNA-Ser
NC_006570.2	RefSeq	gene	1314025	1316049	.	+	.	ID=gene1314;Name=metG;Dbxref=GeneID:3192497;gbkey=Gene;gene=metG;locus_tag=FTT_1290
NC_006570.2	RefSeq	CDS	1314025	1316049	.	+	0	ID=cds1160;Name=YP_170245.1;Parent=gene1314;Note=methionine--tRNA ligase%3B MetRS%3B adds methionine to tRNA%28Met%29 with cleavage of ATP to AMP and diphosphate%3B some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not%3B four subfamilies exist based on sequence motifs and zinc content;Dbxref=GOA:Q5NFE7,InterPro:IPR015413,UniProtKB%2FSwiss-Prot:Q5NFE7,Genbank:YP_170245.1,GeneID:3192497;gbkey=CDS;product=methionyl-tRNA synthetase;protein_id=YP_170245.1;transl_table=11
NC_006570.2	RefSeq	gene	1316015	1317289	.	+	.	ID=gene1315;Name=FTT_1291;Dbxref=GeneID:3191093;gbkey=Gene;locus_tag=FTT_1291
NC_006570.2	RefSeq	CDS	1316015	1317289	.	+	0	ID=cds1161;Name=YP_170246.1;Parent=gene1315;Note=Similar to EXUT_BACSU %28O34456%29 Hexuronate transporter from Bacillus subtilis %28422 aa%29. FASTA: opt: 655 Z-score: 716.7 E%28%29: 5e-32 Smith-Waterman score: 659%3B 28.250 identity in 400 aa overlap. ORF ftt1291;Dbxref=InterPro:IPR011701,UniProtKB%2FTrEMBL:Q5NFE6,Genbank:YP_170246.1,GeneID:3191093;gbkey=CDS;product=major facilitator transporter;protein_id=YP_170246.1;transl_table=11
NC_006570.2	RefSeq	gene	1317286	1317888	.	-	.	ID=gene1316;Name=FTT_1292c;Dbxref=GeneID:3191094;gbkey=Gene;locus_tag=FTT_1292c
NC_006570.2	RefSeq	CDS	1317286	1317888	.	-	0	ID=cds1162;Name=YP_170247.1;Parent=gene1316;Note=Similar to Q88YM1 Hypothetical protein from Lactobacillus plantarum %28215 aa%29. FASTA: opt: 420 Z-score: 532.1 E%28%29: 9.5e-22 Smith-Waterman score: 420%3B 35.025 identity in 197 aa overlap. ORF ftt1292c;Dbxref=InterPro:IPR015796,UniProtKB%2FTrEMBL:Q5NFE5,Genbank:YP_170247.1,GeneID:3191094;gbkey=CDS;product=hypothetical protein;protein_id=YP_170247.1;transl_table=11
NC_006570.2	RefSeq	gene	1317938	1318552	.	-	.	ID=gene1317;Name=FTT_1293c;Dbxref=GeneID:3191096;gbkey=Gene;locus_tag=FTT_1293c
NC_006570.2	RefSeq	CDS	1317938	1318552	.	-	0	ID=cds1163;Name=YP_170248.1;Parent=gene1317;Note=Similar to Q9KSS8 Hypothetical protein VC1178 from Vibrio cholerae %28206 aa%29. FASTA: opt: 558 Z-score: 715.6 E%28%29: 5.8e-32 Smith-Waterman score: 558%3B 42.703 identity in 185 aa overlap. ORF ftt1293c;Dbxref=InterPro:IPR017945,UniProtKB%2FTrEMBL:Q5NFE4,Genbank:YP_170248.1,GeneID:3191096;gbkey=CDS;product=Sua5_yciO_yrdC family protein;protein_id=YP_170248.1;transl_table=11
NC_006570.2	RefSeq	gene	1318613	1319143	.	+	.	ID=gene1318;Name=ispZ;Dbxref=GeneID:3192218;gbkey=Gene;gene=ispZ;locus_tag=FTT_1294
NC_006570.2	RefSeq	CDS	1318613	1319143	.	+	0	ID=cds1164;Name=YP_170249.1;Parent=gene1318;Note=Similar to ISPZ_RALSO %28Q8XYL2%29 Probable intracellular septation protein from Ralstonia solanacearum %28Pseudomonas solanacearum%29 %28186 aa%29. FASTA: opt: 549 Z-score: 659.0 E%28%29: 8.2e-29 Smith-Waterman score: 549%3B 38.150 identity in 173 aa overlap.;Dbxref=GOA:Q5NFE3,InterPro:IPR006008,UniProtKB%2FTrEMBL:Q5NFE3,Genbank:YP_170249.1,GeneID:3192218;gbkey=CDS;product=intracellular septation protein A family protein;protein_id=YP_170249.1;transl_table=11
NC_006570.2	RefSeq	gene	1319482	1320498	.	-	.	ID=gene1319;Name=glk1;Dbxref=GeneID:3192511;gbkey=Gene;gene=glk1;locus_tag=FTT_1295c
NC_006570.2	RefSeq	CDS	1319482	1320498	.	-	0	ID=cds1165;Name=YP_170250.1;Parent=gene1319;Note=Similar to GLK_ANASP %28P58616%29 Glucokinase from Anabaena sp. %28strain PCC 7120%29 %28342 aa%29. FASTA: opt: 735 Z-score: 904.6 E%28%29: 1.7e-42 Smith-Waterman score: 735%3B 36.735 identity in 343 aa overlap.;Dbxref=GOA:Q5NFE2,InterPro:IPR003836,UniProtKB%2FTrEMBL:Q5NFE2,Genbank:YP_170250.1,GeneID:3192511;gbkey=CDS;product=glucose kinase;protein_id=YP_170250.1;transl_table=11
NC_006570.2	RefSeq	gene	1320592	1321344	.	+	.	ID=gene1320;Name=ubiE;Dbxref=GeneID:3192321;gbkey=Gene;gene=ubiE;locus_tag=FTT_1296
NC_006570.2	RefSeq	CDS	1320592	1321344	.	+	0	ID=cds1166;Name=YP_170251.1;Parent=gene1320;Note=Similar to Q8D1I3 COQ5 methyltransferase from Yersinia pestis %28251 aa%29. FASTA: opt: 1184 Z-score: 1440.7 E%28%29: 2.4e-72 Smith-Waterman score: 1184%3B 70.800 identity in 250 aa overlap.;Dbxref=GOA:Q5NFE1,InterPro:IPR004033,UniProtKB%2FSwiss-Prot:Q5NFE1,Genbank:YP_170251.1,GeneID:3192321;gbkey=CDS;product=menaquinone biosynthesis methyltransferase;protein_id=YP_170251.1;transl_table=11
NC_006570.2	RefSeq	gene	1321328	1321933	.	+	.	ID=gene1321;Name=FTT_1297;Dbxref=GeneID:3191097;gbkey=Gene;locus_tag=FTT_1297
NC_006570.2	RefSeq	CDS	1321328	1321933	.	+	0	ID=cds1167;Name=YP_170252.1;Parent=gene1321;Note=ORF ftt1297;Dbxref=UniProtKB%2FTrEMBL:Q5NFE0,Genbank:YP_170252.1,GeneID:3191097;gbkey=CDS;product=hypothetical protein;protein_id=YP_170252.1;transl_table=11
NC_006570.2	RefSeq	gene	1321926	1323584	.	+	.	ID=gene1322;Name=ubiB;Dbxref=GeneID:3190824;gbkey=Gene;gene=ubiB;locus_tag=FTT_1298
NC_006570.2	RefSeq	CDS	1321926	1323584	.	+	0	ID=cds1168;Name=YP_170253.1;Parent=gene1322;Note=Similar to Q83A88 Ubiquinone biosynthesis protein AarF%2C  from Coxiella burnetii %28541 aa%29. FASTA: opt: 1682 Z-score: 2006.3 E%28%29: 7.3e-104 Smith-Waterman score: 1682%3B 48.269 identity in 520 aa overlap. unrelated to the ABC transporter proteins.;Dbxref=GOA:Q5NFD9,InterPro:IPR010232,UniProtKB%2FTrEMBL:Q5NFD9,Genbank:YP_170253.1,GeneID:3190824;gbkey=CDS;product=2-polyprenylphenol 6-hydroxylase;protein_id=YP_170253.1;transl_table=11
NC_006570.2	RefSeq	gene	1323590	1323928	.	+	.	ID=gene1323;Name=hitA;Dbxref=GeneID:3192431;gbkey=Gene;gene=hitA;locus_tag=FTT_1299
NC_006570.2	RefSeq	CDS	1323590	1323928	.	+	0	ID=cds1169;Name=YP_170254.1;Parent=gene1323;Note=Similar to Q82WM8 HIT %28Histidine triad%29 family from Nitrosomonas europaea %28116 aa%29. FASTA: opt: 424 Z-score: 574.5 E%28%29: 4.1e-24 Smith-Waterman score: 424%3B 53.571 identity in 112 aa overlap.;Dbxref=GOA:Q5NFD8,InterPro:IPR011151,UniProtKB%2FTrEMBL:Q5NFD8,Genbank:YP_170254.1,GeneID:3192431;gbkey=CDS;product=histidine triad %28HIT%29 family protein;protein_id=YP_170254.1;transl_table=11
NC_006570.2	RefSeq	gene	1323945	1324076	.	-	.	ID=gene1324;Name=FTT_1300c;Dbxref=GeneID:3191100;gbkey=Gene;locus_tag=FTT_1300c
NC_006570.2	RefSeq	CDS	1323945	1324076	.	-	0	ID=cds1170;Name=YP_170255.1;Parent=gene1324;Note=ORF ftt1300c;Dbxref=UniProtKB%2FTrEMBL:Q5NFD7,Genbank:YP_170255.1,GeneID:3191100;gbkey=CDS;product=hypothetical protein;protein_id=YP_170255.1;transl_table=11
NC_006570.2	RefSeq	gene	1324443	1325100	.	-	.	ID=gene1325;Name=FTT_1301c;Dbxref=GeneID:3191102;gbkey=Gene;locus_tag=FTT_1301c;pseudo=true
NC_006570.2	RefSeq	gene	1325075	1325905	.	+	.	ID=gene1326;Name=FTT_1302;Dbxref=GeneID:3191106;gbkey=Gene;locus_tag=FTT_1302
NC_006570.2	RefSeq	CDS	1325075	1325905	.	+	0	ID=cds1171;Name=YP_170256.1;Parent=gene1326;Note=ORF ftt1302;Dbxref=UniProtKB%2FTrEMBL:Q5NFD6,Genbank:YP_170256.1,GeneID:3191106;gbkey=CDS;product=hypothetical protein;protein_id=YP_170256.1;transl_table=11
NC_006570.2	RefSeq	gene	1325907	1326782	.	-	.	ID=gene1327;Name=FTT_1303c;Dbxref=GeneID:3191105;gbkey=Gene;locus_tag=FTT_1303c
NC_006570.2	RefSeq	CDS	1325907	1326782	.	-	0	ID=cds1172;Name=YP_170257.1;Parent=gene1327;Note=ORF ftt1303c;Dbxref=UniProtKB%2FTrEMBL:Q5NFD5,Genbank:YP_170257.1,GeneID:3191105;gbkey=CDS;product=hypothetical protein;protein_id=YP_170257.1;transl_table=11
NC_006570.2	RefSeq	gene	1326861	1327709	.	-	.	ID=gene1328;Name=murB;Dbxref=GeneID:3191254;gbkey=Gene;gene=murB;locus_tag=FTT_1304c
NC_006570.2	RefSeq	CDS	1326861	1327709	.	-	0	ID=cds1173;Name=YP_170258.1;Parent=gene1328;Note=Similar to MURB_THEMA %28Q9X239%29 UDP-N-acetylenolpyruvoylglucosamine reductase from Thermotoga maritima %28284 aa%29. FASTA: opt: 577 Z-score: 699.7 E%28%29: 4.4e-31 Smith-Waterman score: 577%3B 39.273 identity in 275 aa overlap.;Dbxref=GOA:Q5NFD4,InterPro:IPR016169,UniProtKB%2FSwiss-Prot:Q5NFD4,Genbank:YP_170258.1,GeneID:3191254;gbkey=CDS;product=UDP-N-acetylenolpyruvoylglucosamine reductase;protein_id=YP_170258.1;transl_table=11
NC_006570.2	RefSeq	gene	1327717	1329051	.	-	.	ID=gene1329;Name=murA;Dbxref=GeneID:3191251;gbkey=Gene;gene=murA;locus_tag=FTT_1305c
NC_006570.2	RefSeq	CDS	1327717	1329051	.	-	0	ID=cds1174;Name=YP_170259.1;Parent=gene1329;Note=Similar to Q814X9 UDP-N-acetylglucosamine 1-carboxyvinyltransferase from Bacillus cereus %28strain ATCC 14579 %2F DSM 31%29 %28434 aa%29. FASTA: opt: 697 Z-score: 859.3 E%28%29: 5.6e-40 Smith-Waterman score: 765%3B 33.333 identity in 438 aa overlap.;Dbxref=GOA:Q5NFD3,InterPro:IPR005750,UniProtKB%2FTrEMBL:Q5NFD3,Genbank:YP_170259.1,GeneID:3191251;gbkey=CDS;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=YP_170259.1;transl_table=11
NC_006570.2	RefSeq	gene	1328990	1330387	.	-	.	ID=gene1330;Name=engA;Dbxref=GeneID:3191567;gbkey=Gene;gene=engA;locus_tag=FTT_1306c
NC_006570.2	RefSeq	CDS	1328990	1330387	.	-	0	ID=cds1175;Name=YP_170260.1;Parent=gene1330;Note=EngA%3B essential Neisserial GTPase%3B synchronizes cellular events by interacting with multiple targets with tandem G-domains%3B overexpression in Escherichia coli suppresses rrmJ mutation%3B structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains;Dbxref=GOA:Q5NFD2,InterPro:IPR016484,UniProtKB%2FSwiss-Prot:Q5NFD2,Genbank:YP_170260.1,GeneID:3191567;gbkey=CDS;product=GTP-binding protein EngA;protein_id=YP_170260.1;transl_table=11
NC_006570.2	RefSeq	gene	1330603	1331139	.	-	.	ID=gene1331;Name=FTT_1307c;Dbxref=GeneID:3191107;gbkey=Gene;locus_tag=FTT_1307c
NC_006570.2	RefSeq	CDS	1330603	1331139	.	-	0	ID=cds1176;Name=YP_170261.1;Parent=gene1331;Note=ORF ftt1307c;Dbxref=UniProtKB%2FTrEMBL:Q5NFD1,Genbank:YP_170261.1,GeneID:3191107;gbkey=CDS;product=hypothetical protein;protein_id=YP_170261.1;transl_table=11
NC_006570.2	RefSeq	gene	1331184	1331792	.	-	.	ID=gene1332;Name=FTT_1308c;Dbxref=GeneID:3191108;gbkey=Gene;locus_tag=FTT_1308c
NC_006570.2	RefSeq	CDS	1331184	1331792	.	-	0	ID=cds1177;Name=YP_170262.1;Parent=gene1332;Note=ORF ftt1308c;Dbxref=UniProtKB%2FTrEMBL:Q5NFD0,Genbank:YP_170262.1,GeneID:3191108;gbkey=CDS;product=hypothetical protein;protein_id=YP_170262.1;transl_table=11
NC_006570.2	RefSeq	repeat_region	1332122	1332133	.	-	.	ID=id196;Note=ISFtu1 12bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	gene	1332221	1332693	.	-	.	ID=gene1333;Name=isftu1;Dbxref=GeneID:8303687;gbkey=Gene;gene=isftu1;locus_tag=FTT_1309c;pseudo=true
NC_006570.2	RefSeq	repeat_region	1332714	1332729	.	-	.	ID=id197;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	1332730	1332745	.	-	.	ID=id198;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	1332746	1332757	.	-	.	ID=id199;Note=ISFtu1 12bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	gene	1332931	1334847	.	-	.	ID=gene1334;Name=hflB;Dbxref=GeneID:3192424;gbkey=Gene;gene=hflB;locus_tag=FTT_1310c
NC_006570.2	RefSeq	CDS	1332931	1334847	.	-	0	ID=cds1178;Name=YP_170263.1;Parent=gene1334;Note=Similar to FTSH_ECO57 %28Q8X9L0%29 Cell division protease ftsH from Escherichia coli O157:H7 %28644 aa%29. FASTA: opt: 2569 Z-score: 2823.5 E%28%29: 2.2e-149 Smith-Waterman score: 2569%3B 60.125 identity in 642 aa overlap.;Dbxref=GOA:Q5NFC9,InterPro:IPR011546,UniProtKB%2FTrEMBL:Q5NFC9,Genbank:YP_170263.1,GeneID:3192424;gbkey=CDS;product=ATP-dependent metalloprotease;protein_id=YP_170263.1;transl_table=11
NC_006570.2	RefSeq	gene	1335070	1336476	.	+	.	ID=gene1335;Name=yieO;Dbxref=GeneID:3191279;gbkey=Gene;gene=yieO;locus_tag=FTT_1311
NC_006570.2	RefSeq	CDS	1335070	1336476	.	+	0	ID=cds1179;Name=YP_170264.1;Parent=gene1335;Note=Similar to Q8UHQ9 MFS permease from Agrobacterium tumefaciens %28strain C58 %2F ATCC 33970%29 %28475 aa%29. FASTA: opt: 757 Z-score: 760.1 E%28%29: 1.9e-34 Smith-Waterman score: 766%3B 32.735 identity in 446 aa overlap.;Dbxref=GOA:Q5NFC8,InterPro:IPR018130,UniProtKB%2FTrEMBL:Q5NFC8,Genbank:YP_170264.1,GeneID:3191279;gbkey=CDS;product=major facilitator transporter;protein_id=YP_170264.1;transl_table=11
NC_006570.2	RefSeq	gene	1336482	1339304	.	-	.	ID=gene1336;Name=uvrA;Dbxref=GeneID:3191913;gbkey=Gene;gene=uvrA;locus_tag=FTT_1312c
NC_006570.2	RefSeq	CDS	1336482	1339304	.	-	0	ID=cds1180;Name=YP_170265.1;Parent=gene1336;Note=Similar to UVRA_PSEAE %28Q9HWG0%29 UvrABC system protein A %28UvrA protein%29 from Pseudomonas aeruginosa %28945 aa%29. FASTA: opt: 4062 Z-score: 4339.5 E%28%29:0 Smith-Waterman score: 4062%3B 63.800identity in 942 aa overlap.;Dbxref=GOA:Q5NFC7,InterPro:IPR017871,UniProtKB%2FTrEMBL:Q5NFC7,Genbank:YP_170265.1,GeneID:3191913;gbkey=CDS;product=DNA excision repair protein subunit A;protein_id=YP_170265.1;transl_table=11
NC_006570.2	RefSeq	gene	1339343	1339825	.	-	.	ID=gene1337;Name=greA;Dbxref=GeneID:3191923;gbkey=Gene;gene=greA;locus_tag=FTT_1313c
NC_006570.2	RefSeq	CDS	1339343	1339825	.	-	0	ID=cds1181;Name=YP_170266.1;Parent=gene1337;Note=necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites%3B arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through%2C resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3%27terminus;Dbxref=GOA:Q5NFC6,InterPro:IPR018151,UniProtKB%2FTrEMBL:Q5NFC6,Genbank:YP_170266.1,GeneID:3191923;gbkey=CDS;product=transcription elongation factor GreA;protein_id=YP_170266.1;transl_table=11
NC_006570.2	RefSeq	gene	1339859	1340443	.	-	.	ID=gene1338;Name=FTT_1314c;Dbxref=GeneID:3191109;gbkey=Gene;locus_tag=FTT_1314c
NC_006570.2	RefSeq	CDS	1339859	1340443	.	-	0	ID=cds1182;Name=YP_170267.1;Parent=gene1338;Note=Similar to Q8EBJ4 Type IV pilus biogenesis protein %28164 aa%29. FASTA: opt: 157 Z-score: 204.8 E%28%29: 0.0016 Smith-Waterman score: 157%3B 27.607 identity in 163 aa overlap. The pili fiber building block protein has a highly distinct primary structure%3B a short positively charged leader sequence%2C and a highly conserved and highly hydrophobic amino-terminal domain which forms the core of the pilus fiber%3B A variety of studies suggest that the invariant glycine %28G%29 at -1 is required for prepilin cleavage and assembly and that the glutamate %28E%29 at %2B 5 is essential for assembly and efficient N-terminal methylation but not cleavage. The region near the carboxy terminus is often hydrophilic and is stabilized by one or two disulfide bridges that may be involved in recognition of receptors. The genes with these characteristics are usually termed pilA%2C pilE%2C pilV%2C pilW%2C pilX and FimU. %28Mattick John S.. %27Type IV Pili and twitching motility%27. Annu. Rev. Microbiol. 2002. 56:289-314.%29 This protein has all the characteristics described above%2C except the glutamate %28E%29 at %2B 5%2C but shows a weak global homology. ORF ftt1314c;Dbxref=InterPro:IPR012902,UniProtKB%2FTrEMBL:Q5NFC5,Genbank:YP_170267.1,GeneID:3191109;gbkey=CDS;product=Type IV pili fiber building block protein;protein_id=YP_170267.1;transl_table=11
NC_006570.2	RefSeq	gene	1340444	1342066	.	-	.	ID=gene1339;Name=pgi;Dbxref=GeneID:3191335;gbkey=Gene;gene=pgi;locus_tag=FTT_1315c
NC_006570.2	RefSeq	CDS	1340444	1342066	.	-	0	ID=cds1183;Name=YP_170268.1;Parent=gene1339;Note=functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways %28EMP%29 and in gluconeogenesis%3B catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate%3B member of PGI family;Dbxref=GOA:Q5NFC4,InterPro:IPR018189,UniProtKB%2FSwiss-Prot:Q5NFC4,Genbank:YP_170268.1,GeneID:3191335;gbkey=CDS;product=glucose-6-phosphate isomerase;protein_id=YP_170268.1;transl_table=11
NC_006570.2	RefSeq	gene	1342053	1342706	.	-	.	ID=gene1340;Name=FTT_1316c;Dbxref=GeneID:3191111;gbkey=Gene;locus_tag=FTT_1316c
NC_006570.2	RefSeq	CDS	1342053	1342706	.	-	0	ID=cds1184;Name=YP_170269.1;Parent=gene1340;Note=Similar to Q8R9T9 Thiamine pyrophosphokinase from Thermoanaerobacter tengcongensis %28211 aa%29. FASTA: opt: 221 Z-score: 278.6 E%28%29: 1.3e-07 Smith-Waterman score: 238%3B 25.943 identity in 212 aa overlap. ORF ftt1316c;Dbxref=GOA:Q5NFC3,InterPro:IPR007371,UniProtKB%2FTrEMBL:Q5NFC3,Genbank:YP_170269.1,GeneID:3191111;gbkey=CDS;product=thiamine pyrophospokinase;protein_id=YP_170269.1;transl_table=11
NC_006570.2	RefSeq	gene	1342772	1344232	.	-	.	ID=gene1341;Name=guaB;Dbxref=GeneID:3192330;gbkey=Gene;gene=guaB;locus_tag=FTT_1317c
NC_006570.2	RefSeq	CDS	1342772	1344232	.	-	0	ID=cds1185;Name=YP_170270.1;Parent=gene1341;Note=Similar to Q88P22 Inosine-5-monophosphate dehydrogenase from Pseudomonas putida %28strain KT2440%29 %28489 aa%29. FASTA: opt: 2187 Z-score: 2403.4 E%28%29: 5.6e-126 Smith-Waterman score: 2187%3B 68.033 identity in 488 aa overlap.;Dbxref=GOA:Q5NFC2,InterPro:IPR018529,UniProtKB%2FTrEMBL:Q5NFC2,Genbank:YP_170270.1,GeneID:3192330;gbkey=CDS;product=inosine-5%27-monophosphate dehydrogenase;protein_id=YP_170270.1;transl_table=11
NC_006570.2	RefSeq	gene	1344333	1345772	.	-	.	ID=gene1342;Name=pepA;Dbxref=GeneID:3191324;gbkey=Gene;gene=pepA;locus_tag=FTT_1318c
NC_006570.2	RefSeq	CDS	1344333	1345772	.	-	0	ID=cds1186;Name=YP_170271.1;Parent=gene1342;Note=Similar to Q887M0 Cytosol aminopeptidase from Pseudomonas syringae %28pv. tomato%29 %28496 aa%29. FASTA: opt: 1161 Z-score: 1388.1 E%28%29: 2e-69 Smith-Waterman score: 1165%3B 42.540 identity in 496 aa overlap.;Dbxref=GOA:Q5NFC1,InterPro:IPR011356,UniProtKB%2FTrEMBL:Q5NFC1,Genbank:YP_170271.1,GeneID:3191324;gbkey=CDS;product=cytosol aminopeptidase;protein_id=YP_170271.1;transl_table=11
NC_006570.2	RefSeq	gene	1345938	1347020	.	+	.	ID=gene1343;Name=FTT_1319;Dbxref=GeneID:3191112;gbkey=Gene;locus_tag=FTT_1319
NC_006570.2	RefSeq	CDS	1345938	1347020	.	+	0	ID=cds1187;Name=YP_170272.1;Parent=gene1343;Note=Similar to Q8EH61 Conserved hypothetical protein from Shewanella oneidensis %28370 aa%29. FASTA: opt: 370 Z-score: 433.4 E%28%29: 3e-16 Smith-Waterman score: 370%3B 21.508 identity in 358 aa overlap. ORF ftt1319;Dbxref=GOA:Q5NFC0,InterPro:IPR005495,UniProtKB%2FTrEMBL:Q5NFC0,Genbank:YP_170272.1,GeneID:3191112;gbkey=CDS;product=YjgP%2FYjgQ family permease;protein_id=YP_170272.1;transl_table=11
NC_006570.2	RefSeq	gene	1347020	1348081	.	+	.	ID=gene1344;Name=FTT_1320;Dbxref=GeneID:3191114;gbkey=Gene;locus_tag=FTT_1320
NC_006570.2	RefSeq	CDS	1347020	1348081	.	+	0	ID=cds1188;Name=YP_170273.1;Parent=gene1344;Note=Similar to Q8ZK26  permease from Salmonella typhimurium %28360 aa%29. FASTA: opt: 510 Z-score: 585.0 E%28%29: 1.1e-24 Smith-Waterman score: 511%3B 27.147 identity in 361 aa overlap. ORF ftt1320;Dbxref=GOA:Q5NFB9,InterPro:IPR005495,UniProtKB%2FTrEMBL:Q5NFB9,Genbank:YP_170273.1,GeneID:3191114;gbkey=CDS;product=YjgP%2FYjgQ family permease;protein_id=YP_170273.1;transl_table=11
NC_006570.2	RefSeq	gene	1348089	1349342	.	+	.	ID=gene1345;Name=FTT_1321;Dbxref=GeneID:3191116;gbkey=Gene;locus_tag=FTT_1321
NC_006570.2	RefSeq	CDS	1348089	1349342	.	+	0	ID=cds1189;Name=YP_170274.1;Parent=gene1345;Note=Similar to Q83AI4 Peptidase%2C M16 family from Coxiella burnetii %28459 aa%29. FASTA: opt: 868 Z-score: 1053.1 E%28%29: 9.1e-51 Smith-Waterman score: 868%3B 34.158 identity in 404 aa overlap. ORF ftt1321;Dbxref=GOA:Q5NFB8,InterPro:IPR011765,UniProtKB%2FTrEMBL:Q5NFB8,Genbank:YP_170274.1,GeneID:3191116;gbkey=CDS;product=peptidase M16 family protein;protein_id=YP_170274.1;transl_table=11
NC_006570.2	RefSeq	gene	1349349	1350572	.	+	.	ID=gene1346;Name=FTT_1322;Dbxref=GeneID:3191117;gbkey=Gene;locus_tag=FTT_1322
NC_006570.2	RefSeq	CDS	1349349	1350572	.	+	0	ID=cds1190;Name=YP_170275.1;Parent=gene1346;Note=Similar to Q83AI5 Peptidase%2C M16 family from Coxiella burnetii %28443 aa%29. FASTA: opt: 605 Z-score: 727.1 E%28%29: 1.3e-32 Smith-Waterman score: 605%3B 28.607 identity in 402 aa overlap. ORF ftt1322;Dbxref=GOA:Q5NFB7,InterPro:IPR011765,UniProtKB%2FTrEMBL:Q5NFB7,Genbank:YP_170275.1,GeneID:3191117;gbkey=CDS;product=peptidase M16 family protein;protein_id=YP_170275.1;transl_table=11
NC_006570.2	RefSeq	gene	1350573	1351151	.	+	.	ID=gene1347;Name=FTT_1323;Dbxref=GeneID:3191119;gbkey=Gene;locus_tag=FTT_1323
NC_006570.2	RefSeq	CDS	1350573	1351151	.	+	0	ID=cds1191;Name=YP_170276.1;Parent=gene1347;Note=Similar to YHHF_HAEIN %28P44869%29  methylase HI0767 from Haemophilus influenzae %28193 aa%29. FASTA: opt: 455 Z-score: 588.3 E%28%29: 7e-25 Smith-Waterman score: 455%3B 42.697 identity in 178 aa overlap. ORF ftt1323;Dbxref=GOA:Q5NFB6,InterPro:IPR016065,UniProtKB%2FTrEMBL:Q5NFB6,Genbank:YP_170276.1,GeneID:3191119;gbkey=CDS;product=methylase;protein_id=YP_170276.1;transl_table=11
NC_006570.2	RefSeq	gene	1351185	1351835	.	+	.	ID=gene1348;Name=FTT_1324;Dbxref=GeneID:3191120;gbkey=Gene;locus_tag=FTT_1324
NC_006570.2	RefSeq	CDS	1351185	1351835	.	+	0	ID=cds1192;Name=YP_170277.1;Parent=gene1348;Note=Similar to Q9CM99 Hypothetical protein PM0935 from Pasteurella multocida %28226 aa%29. FASTA: opt: 523 Z-score: 599.4 E%28%29: 1.7e-25 Smith-Waterman score: 523%3B 39.151 identity in 212 aa overlap. ORF ftt1324;Dbxref=InterPro:IPR005115,UniProtKB%2FTrEMBL:Q5NFB5,Genbank:YP_170277.1,GeneID:3191120;gbkey=CDS;product=hypothetical protein;protein_id=YP_170277.1;transl_table=11
NC_006570.2	RefSeq	gene	1351888	1352499	.	-	.	ID=gene1349;Name=miaE;Dbxref=GeneID:3190883;gbkey=Gene;gene=miaE;locus_tag=FTT_1325c
NC_006570.2	RefSeq	CDS	1351888	1352499	.	-	0	ID=cds1193;Name=YP_170278.1;Parent=gene1349;Note=Similar to Q88KV1 TRNA-%28ms%282%29io%286%29a%29-hydroxylase%2C  from Pseudomonas putida %28strain KT2440%29%28205 aa%29. FASTA: opt: 660 Z-score: 867.5 E%28%29: 2e-40 Smith-Waterman score: 660%3B 50.777 identity in 193 aa overlap.;Dbxref=GOA:Q5NFB4,InterPro:IPR010386,UniProtKB%2FTrEMBL:Q5NFB4,Genbank:YP_170278.1,GeneID:3190883;gbkey=CDS;product=tRNA-%28ms%282%29io%286%29a%29-hydroxylase;protein_id=YP_170278.1;transl_table=11
NC_006570.2	RefSeq	gene	1352615	1353418	.	+	.	ID=gene1350;Name=udp;Dbxref=GeneID:3192475;gbkey=Gene;gene=udp;locus_tag=FTT_1326
NC_006570.2	RefSeq	CDS	1352615	1353418	.	+	0	ID=cds1194;Name=YP_170279.1;Parent=gene1350;Note=Similar to Q9CKN8 Udp from Pasteurella multocida %28252 aa%29. FASTA: opt: 817 Z-score: 1065.9 E%28%29: 1.8e-51 Smith-Waterman score: 817%3B 48.760 identity in 242 aa overlap.;Dbxref=GOA:Q5NFB3,InterPro:IPR018017,UniProtKB%2FTrEMBL:Q5NFB3,Genbank:YP_170279.1,GeneID:3192475;gbkey=CDS;product=uridine phosphorylase;protein_id=YP_170279.1;transl_table=11
NC_006570.2	RefSeq	gene	1353439	1353840	.	+	.	ID=gene1351;Name=cdd;Dbxref=GeneID:3190961;gbkey=Gene;gene=cdd;locus_tag=FTT_1327
NC_006570.2	RefSeq	CDS	1353439	1353840	.	+	0	ID=cds1195;Name=YP_170280.1;Parent=gene1351;Note=Similar to Q8RCG7 Cytidine deaminase from Thermoanaerobacter tengcongensis %28135 aa%29. FASTA: opt: 413 Z-score: 565.4 E%28%29: 1.3e-23 Smith-Waterman score: 413%3B 52.273 identity in 132 aa overlap.;Dbxref=GOA:Q5NFB2,InterPro:IPR016192,UniProtKB%2FTrEMBL:Q5NFB2,Genbank:YP_170280.1,GeneID:3190961;gbkey=CDS;product=cytidine deaminase;protein_id=YP_170280.1;transl_table=11
NC_006570.2	RefSeq	gene	1353942	1354017	.	-	.	ID=gene1352;Name=tRNA-Lys %28TTT%29;Dbxref=GeneID:8303676;description=tRNA-Lys %28TTT%29;gbkey=Gene;gene=tRNA-Lys %28TTT%29;locus_tag=FTT_t22
NC_006570.2	RefSeq	tRNA	1353942	1354017	.	-	.	ID=rna25;Dbxref=GeneID:8303676;codons=42;gbkey=tRNA;product=tRNA-Lys
NC_006570.2	RefSeq	exon	1353942	1354017	.	-	.	ID=id200;Parent=rna25;Dbxref=GeneID:8303676;codons=42;gbkey=tRNA;product=tRNA-Lys
NC_006570.2	RefSeq	gene	1354038	1357067	.	-	.	ID=gene1353;Name=FTT_1328c;Dbxref=GeneID:3191121;gbkey=Gene;locus_tag=FTT_1328c
NC_006570.2	RefSeq	CDS	1354038	1357067	.	-	0	ID=cds1196;Name=YP_003097805.1;Parent=gene1353;Note=Similar to Q8EDV0 Oxidoreductase%2CFAD-binding%2C  from Shewanella oneidensis %281013 aa%29.;Dbxref=Genbank:YP_003097805.1,GeneID:3191121;gbkey=CDS;product=FAD-binding family protein;protein_id=YP_003097805.1;transl_table=11
NC_006570.2	RefSeq	gene	1357287	1358825	.	+	.	ID=gene1354;Name=gpmI;Dbxref=GeneID:3190945;gbkey=Gene;gene=gpmI;locus_tag=FTT_1329
NC_006570.2	RefSeq	CDS	1357287	1358825	.	+	0	ID=cds1197;Name=YP_170281.1;Parent=gene1354;Note=catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate;Dbxref=GOA:Q5NFB1,InterPro:IPR017849,UniProtKB%2FSwiss-Prot:Q5NFB1,Genbank:YP_170281.1,GeneID:3190945;gbkey=CDS;product=phosphoglyceromutase;protein_id=YP_170281.1;transl_table=11
NC_006570.2	RefSeq	gene	1358840	1360120	.	+	.	ID=gene1355;Name=serS;Dbxref=GeneID:3190714;gbkey=Gene;gene=serS;locus_tag=FTT_1330
NC_006570.2	RefSeq	CDS	1358840	1360120	.	+	0	ID=cds1198;Name=YP_170282.1;Parent=gene1355;Note=catalyzes a two-step reaction%2C first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA;Dbxref=GOA:Q5NFB0,InterPro:IPR018156,UniProtKB%2FSwiss-Prot:Q5NFB0,Genbank:YP_170282.1,GeneID:3190714;gbkey=CDS;product=seryl-tRNA synthetase;protein_id=YP_170282.1;transl_table=11
NC_006570.2	RefSeq	gene	1360230	1361129	.	+	.	ID=gene1356;Name=cscK;Dbxref=GeneID:3191896;gbkey=Gene;gene=cscK;locus_tag=FTT_1331
NC_006570.2	RefSeq	CDS	1360230	1361129	.	+	0	ID=cds1199;Name=YP_170283.1;Parent=gene1356;Note=Similar to Q97IW7 Fructokinase from Clostridium acetobutylicum %28288 aa%29. FASTA: opt: 932 Z-score: 1175.6 E%28%29: 1.4e-57 Smith-Waterman score: 932%3B 47.603identity in 292 aa overlap.;Dbxref=GOA:Q5NFA9,InterPro:IPR000600,UniProtKB%2FTrEMBL:Q5NFA9,Genbank:YP_170283.1,GeneID:3191896;gbkey=CDS;product=fructokinase;protein_id=YP_170283.1;transl_table=11
NC_006570.2	RefSeq	gene	1361207	1362466	.	+	.	ID=gene1357;Name=FTT_1332;Dbxref=GeneID:3191123;gbkey=Gene;locus_tag=FTT_1332
NC_006570.2	RefSeq	CDS	1361207	1362466	.	+	0	ID=cds1200;Name=YP_170284.1;Parent=gene1357;Note=Similar to Q9X4C7 Repeat unit exporter from Escherichia coli %28419 aa%29. FASTA: opt: 324 Z-score: 369.2 E%28%29: 1.1e-12 Smith-Waterman score: 324%3B 22.604 identity in 407 aa overlap. ORF ftt1332;Dbxref=GOA:Q5NFA8,InterPro:IPR002797,UniProtKB%2FTrEMBL:Q5NFA8,Genbank:YP_170284.1,GeneID:3191123;gbkey=CDS;product=polysaccharide biosynthesis protein %28export protein%29;protein_id=YP_170284.1;transl_table=11
NC_006570.2	RefSeq	gene	1362470	1362670	.	-	.	ID=gene1358;Name=FTT_1333c;Dbxref=GeneID:3191125;gbkey=Gene;locus_tag=FTT_1333c
NC_006570.2	RefSeq	CDS	1362470	1362670	.	-	0	ID=cds1201;Name=YP_170285.1;Parent=gene1358;Note=ORF ftt1333c;Dbxref=UniProtKB%2FTrEMBL:Q5NFA7,Genbank:YP_170285.1,GeneID:3191125;gbkey=CDS;product=hypothetical protein;protein_id=YP_170285.1;transl_table=11
NC_006570.2	RefSeq	gene	1362698	1363207	.	-	.	ID=gene1359;Name=FTT_1334c;Dbxref=GeneID:3191128;gbkey=Gene;locus_tag=FTT_1334c
NC_006570.2	RefSeq	CDS	1362698	1363207	.	-	0	ID=cds1202;Name=YP_170286.1;Parent=gene1359;Note=ORF ftt1334c;Dbxref=UniProtKB%2FTrEMBL:Q5NFA6,Genbank:YP_170286.1,GeneID:3191128;gbkey=CDS;product=hypothetical protein;protein_id=YP_170286.1;transl_table=11
NC_006570.2	RefSeq	gene	1363584	1365365	.	+	.	ID=gene1360;Name=cydD;Dbxref=GeneID:3191909;gbkey=Gene;gene=cydD;locus_tag=FTT_1335
NC_006570.2	RefSeq	CDS	1363584	1365365	.	+	0	ID=cds1203;Name=YP_170287.1;Parent=gene1360;Note=in Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance%3B important for cytochrome bd and c;Dbxref=GOA:Q5NFA5,InterPro:IPR017940,UniProtKB%2FTrEMBL:Q5NFA5,Genbank:YP_170287.1,GeneID:3191909;gbkey=CDS;product=cysteine%2Fglutathione ABC transporter membrane%2FATP-binding protein;protein_id=YP_170287.1;transl_table=11
NC_006570.2	RefSeq	gene	1365362	1367011	.	+	.	ID=gene1361;Name=cydC;Dbxref=GeneID:3191906;gbkey=Gene;gene=cydC;locus_tag=FTT_1336
NC_006570.2	RefSeq	CDS	1365362	1367011	.	+	0	ID=cds1204;Name=YP_170288.1;Parent=gene1361;Note=in Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance%3B important for cytochrome bd and c;Dbxref=GOA:Q5NFA4,InterPro:IPR017940,UniProtKB%2FTrEMBL:Q5NFA4,Genbank:YP_170288.1,GeneID:3191906;gbkey=CDS;product=cysteine%2Fglutathione ABC transporter membrane%2FATP-binding protein;protein_id=YP_170288.1;transl_table=11
NC_006570.2	RefSeq	gene	1367013	1368263	.	-	.	ID=gene1362;Name=dctA;Dbxref=GeneID:3191503;gbkey=Gene;gene=dctA;locus_tag=FTT_1337c
NC_006570.2	RefSeq	CDS	1367013	1368263	.	-	0	ID=cds1205;Name=YP_170289.1;Parent=gene1362;Note=Similar to DTA2_PSEAE %28Q9I4F5%29 C4-dicarboxylate transport protein from Pseudomonas aeruginosa %28436 aa%29. FASTA: opt: 1534 Z-score: 1703.1 E%28%29: 5.7e-87 Smith-Waterman score: 1534%3B 55.206identity in 413 aa overlap.;Dbxref=GOA:Q5NFA3,InterPro:IPR018107,UniProtKB%2FTrEMBL:Q5NFA3,Genbank:YP_170289.1,GeneID:3191503;gbkey=CDS;product=C4-dicarboxylate transport protein;protein_id=YP_170289.1;transl_table=11
NC_006570.2	RefSeq	gene	1368402	1368782	.	-	.	ID=gene1363;Name=FTT_1338c;Dbxref=GeneID:3191130;gbkey=Gene;locus_tag=FTT_1338c
NC_006570.2	RefSeq	CDS	1368402	1368782	.	-	0	ID=cds1206;Name=YP_170290.1;Parent=gene1363;Note=Similar to Q99WA6 SA0455 protein %28Translation initiation inhibitor homologue%29 from Staphylococcus aureus %28126 aa%29. FASTA: 452 opt: 452 Z-score: 597.7 E%28%29: 2.1e-25 Smith-Waterman score: 452%3B 61.017 identity in 118 aa overlap. ORF ftt1338c;Dbxref=InterPro:IPR013813,UniProtKB%2FTrEMBL:Q5NFA2,Genbank:YP_170290.1,GeneID:3191130;gbkey=CDS;product=translation initiation inhibitor;protein_id=YP_170290.1;transl_table=11
NC_006570.2	RefSeq	gene	1368782	1370326	.	-	.	ID=gene1364;Name=FTT_1339c;Dbxref=GeneID:3191572;gbkey=Gene;locus_tag=FTT_1339c
NC_006570.2	RefSeq	CDS	1368782	1370326	.	-	0	ID=cds1207;Name=YP_170291.1;Parent=gene1364;Note=Similar to Q87N13 Sulfate permease family protein from Vibrio parahaemolyticus %28519 aa%29. FASTA: opt: 1333 Z-score: 1472.3 E%28%29: 4.1e-74 Smith-Waterman score: 1602%3B 47.398 identity in 538 aa overlap. ORF ftt1339c;Dbxref=GOA:Q5NFA1,InterPro:IPR011547,UniProtKB%2FTrEMBL:Q5NFA1,Genbank:YP_170291.1,GeneID:3191572;gbkey=CDS;product=sulfate permease family protein;protein_id=YP_170291.1;transl_table=11
NC_006570.2	RefSeq	repeat_region	1370419	1370437	.	-	.	ID=id201;Note=ISFtu2 19bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	gene	1370445	1371188	.	-	.	ID=gene1365;Name=isftu2;Dbxref=GeneID:3192307;gbkey=Gene;gene=isftu2;locus_tag=FTT_1340c
NC_006570.2	RefSeq	CDS	1370445	1371188	.	-	0	ID=cds1208;Name=YP_170292.1;Parent=gene1365;Note=ISFtu2. Transposase%2C member of the IS5 family. Identical to Q8GM03  transposase from Francisella tularensis %28247 aa%29.;Dbxref=GOA:Q8GM03,InterPro:IPR002559,UniProtKB%2FTrEMBL:Q8GM03,Genbank:YP_170292.1,GeneID:3192307;gbkey=CDS;product=transposase;protein_id=YP_170292.1;transl_table=11
NC_006570.2	RefSeq	repeat_region	1371265	1371283	.	-	.	ID=id202;Note=ISFtu2 19bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	gene	1371389	1372045	.	+	.	ID=gene1366;Name=FTT_1341;Dbxref=GeneID:3191574;gbkey=Gene;locus_tag=FTT_1341
NC_006570.2	RefSeq	CDS	1371389	1372045	.	+	0	ID=cds1209;Name=YP_170293.1;Parent=gene1366;Note=Similiar to CAD85637 %28Q82TY8%29  integral membrane transmembrane protein from Nitrosomonas europaea %28221 aa%29. FASTA: 670 Z-score: 817.1 E%28%29: 1.2e-37 50.226identity in 221 aa overlap ORF ftt1341;Dbxref=GOA:Q5NF99,InterPro:IPR008915,UniProtKB%2FTrEMBL:Q5NF99,Genbank:YP_170293.1,GeneID:3191574;gbkey=CDS;product=hypothetical protein;protein_id=YP_170293.1;transl_table=11
NC_006570.2	RefSeq	gene	1372159	1373214	.	+	.	ID=gene1367;Name=FTT_1342;Dbxref=GeneID:3191575;gbkey=Gene;locus_tag=FTT_1342
NC_006570.2	RefSeq	CDS	1372159	1373214	.	+	0	ID=cds1210;Name=YP_170294.1;Parent=gene1367;Note=Similar to Q08861 Gamma-aminobutyric acid-grated chloride- ion channel%2Freceptor%2C zeta subunit%2C precusor from Lymnaea stagnalis %28437 aa%29. FASTA: opt: 357 Z-score: 407.4 E%28%29: 7.7e-15 Smith-Waterman score: 360%3B 23.510 identity in 302 aa overlap ORF ftt1342;Dbxref=GOA:Q5NF98,InterPro:IPR006202,UniProtKB%2FTrEMBL:Q5NF98,Genbank:YP_170294.1,GeneID:3191575;gbkey=CDS;product=hypothetical protein;protein_id=YP_170294.1;transl_table=11
NC_006570.2	RefSeq	gene	1373509	1374318	.	-	.	ID=gene1368;Name=FTT_1343c;Dbxref=GeneID:3191576;gbkey=Gene;locus_tag=FTT_1343c
NC_006570.2	RefSeq	CDS	1373509	1374318	.	-	0	ID=cds1211;Name=YP_170295.1;Parent=gene1368;Note=ORF ftt1343c;Dbxref=UniProtKB%2FTrEMBL:Q5NF97,Genbank:YP_170295.1,GeneID:3191576;gbkey=CDS;product=hypothetical protein;protein_id=YP_170295.1;transl_table=11
NC_006570.2	RefSeq	gene	1374666	1374780	.	-	.	ID=gene1369;Name=5S rRNA;Dbxref=GeneID:8303698;description=5S rRNA;gbkey=Gene;gene=5S rRNA;locus_tag=FTT_r05
NC_006570.2	RefSeq	rRNA	1374666	1374780	.	-	.	ID=rna26;Parent=gene1369;Note=uncertain boundries;Dbxref=GeneID:8303698;gbkey=rRNA;product=5S ribosomal RNA
NC_006570.2	RefSeq	exon	1374666	1374780	.	-	.	ID=id203;Parent=rna26;Note=uncertain boundries;Dbxref=GeneID:8303698;gbkey=rRNA;product=5S ribosomal RNA
NC_006570.2	RefSeq	gene	1374831	1377692	.	-	.	ID=gene1370;Name=23S rRNA;Dbxref=GeneID:3190928;description=23S rRNA;gbkey=Gene;gene=23S rRNA;locus_tag=FTT_r06
NC_006570.2	RefSeq	rRNA	1374831	1377692	.	-	.	ID=rna27;Parent=gene1370;Note=uncertain boundries;Dbxref=GeneID:3190928;gbkey=rRNA;product=23S ribosomal RNA
NC_006570.2	RefSeq	exon	1374831	1377692	.	-	.	ID=id204;Parent=rna27;Note=uncertain boundries;Dbxref=GeneID:3190928;gbkey=rRNA;product=23S ribosomal RNA
NC_006570.2	RefSeq	gene	1377767	1377842	.	-	.	ID=gene1371;Name=tRNA-Ala %28TGC%29;Dbxref=GeneID:8303691;description=tRNA-Ala %28TGC%29;gbkey=Gene;gene=tRNA-Ala %28TGC%29;locus_tag=FTT_t23
NC_006570.2	RefSeq	tRNA	1377767	1377842	.	-	.	ID=rna28;Dbxref=GeneID:8303691;codons=54;gbkey=tRNA;product=tRNA-Ala
NC_006570.2	RefSeq	exon	1377767	1377842	.	-	.	ID=id205;Parent=rna28;Dbxref=GeneID:8303691;codons=54;gbkey=tRNA;product=tRNA-Ala
NC_006570.2	RefSeq	gene	1377860	1377933	.	-	.	ID=gene1372;Name=tRNA-Ile %28GAT%29;Dbxref=GeneID:8303712;description=tRNA-Ile %28GAT%29;gbkey=Gene;gene=tRNA-Ile %28GAT%29;locus_tag=FTT_t24
NC_006570.2	RefSeq	tRNA	1377860	1377933	.	-	.	ID=rna29;Dbxref=GeneID:8303712;codons=33;gbkey=tRNA;product=tRNA-Ile
NC_006570.2	RefSeq	exon	1377860	1377933	.	-	.	ID=id206;Parent=rna29;Dbxref=GeneID:8303712;codons=33;gbkey=tRNA;product=tRNA-Ile
NC_006570.2	RefSeq	gene	1378028	1379550	.	-	.	ID=gene1373;Name=16S rRNA;Dbxref=GeneID:3192274;description=16S rRNA;gbkey=Gene;gene=16S rRNA;locus_tag=FTT_r07
NC_006570.2	RefSeq	rRNA	1378028	1379550	.	-	.	ID=rna30;Parent=gene1373;Note=uncertain boundries;Dbxref=GeneID:3192274;gbkey=rRNA;product=16S ribosomal RNA
NC_006570.2	RefSeq	exon	1378028	1379550	.	-	.	ID=id207;Parent=rna30;Note=uncertain boundries;Dbxref=GeneID:3192274;gbkey=rRNA;product=16S ribosomal RNA
NC_006570.2	RefSeq	gene	1379925	1382387	.	+	.	ID=gene1374;Name=pdpA1;Dbxref=GeneID:3191294;gbkey=Gene;gene=pdpA1;locus_tag=FTT_1344
NC_006570.2	RefSeq	CDS	1379925	1382387	.	+	0	ID=cds1212;Name=YP_170296.1;Parent=gene1374;Note=Similar to AAP58968.1 %28Q7X3I9%29 PdpA from Francisella novicida %28820 aa%29. BLAST Score %3D 1545 bits %284000%29%2C Expect %3D 0.0 Identities %3D 777%2F820 %2894%29%2C Positives %3D 787%2F820 %2895%29 Identical to FTT1699. It is part of the duplicated region 1374371..1408281 which is identical to 1767715..1801625;Dbxref=UniProtKB%2FTrEMBL:Q5NED8,Genbank:YP_170296.1,GeneID:3191294;gbkey=CDS;product=hypothetical protein;protein_id=YP_170296.1;transl_table=11
NC_006570.2	RefSeq	gene	1382392	1385673	.	+	.	ID=gene1375;Name=pdpB1;Dbxref=GeneID:3191301;gbkey=Gene;gene=pdpB1;locus_tag=FTT_1345
NC_006570.2	RefSeq	CDS	1382392	1385673	.	+	0	ID=cds1213;Name=YP_170297.1;Parent=gene1375;Note=Similar to AAP58967.1 %28Q7X3J0%29 PdpB from Francisella novicida %281093 aa%29. BLAST Score %3D 1914 bits %284959%29%2C Expect %3D 0.0 Identities %3D 975%2F1093 %2889%29%2CPositives %3D 988%2F1093 %2890%29 Identical to FTT1700. It is part of the duplicated region 1374371..1408281 which is identical to 1767715..1801625;Dbxref=InterPro:IPR018846,UniProtKB%2FTrEMBL:Q5NED7,Genbank:YP_170297.1,GeneID:3191301;gbkey=CDS;product=hypothetical protein;protein_id=YP_170297.1;transl_table=11
NC_006570.2	RefSeq	gene	1385663	1386040	.	+	.	ID=gene1376;Name=FTT_1346;Dbxref=GeneID:3191570;gbkey=Gene;locus_tag=FTT_1346
NC_006570.2	RefSeq	CDS	1385663	1386040	.	+	0	ID=cds1214;Name=YP_170298.1;Parent=gene1376;Note=Identical to FTT1701. It is part of the duplicated region 1374371..1408281 which is identical to 1767715..1801625 ORF ftt1346;Dbxref=UniProtKB%2FTrEMBL:Q5NED6,Genbank:YP_170298.1,GeneID:3191570;gbkey=CDS;product=hypothetical protein;protein_id=YP_170298.1;transl_table=11
NC_006570.2	RefSeq	gene	1386053	1386547	.	+	.	ID=gene1377;Name=FTT_1347;Dbxref=GeneID:3191577;gbkey=Gene;locus_tag=FTT_1347
NC_006570.2	RefSeq	CDS	1386053	1386547	.	+	0	ID=cds1215;Name=YP_170299.1;Parent=gene1377;Note=Similar to AAP58969.1 %28Q7XI38%29 unknown protein from Francisella novicida %28164 aa%29. BLAST Score %3D 305 bits %28780%29%2C Expect %3D 2e-82 Identities %3D 163%2F164 %2899%29%2CPositives %3D 163%2F164 %2899%29 Identical to FTT1702. It is part of the duplicated region 1374371..1408281 which is identical to 1767715..1801625 ORF ftt1347;Dbxref=UniProtKB%2FTrEMBL:Q5NED5,Genbank:YP_170299.1,GeneID:3191577;gbkey=CDS;product=hypothetical protein;protein_id=YP_170299.1;transl_table=11
NC_006570.2	RefSeq	gene	1386552	1388282	.	+	.	ID=gene1378;Name=FTT_1348;Dbxref=GeneID:3191578;gbkey=Gene;locus_tag=FTT_1348
NC_006570.2	RefSeq	CDS	1386552	1388282	.	+	0	ID=cds1216;Name=YP_170300.1;Parent=gene1378;Note=1-213 aa similar to AAP58970.1 %28Q7X3I7%29 unknown Francisella novicida %28212 aa%29. BLAST Score 352 %2CExpect %3D 1e-95 Identities %3D 177%2F209 %2884%29%2C Positives %3D 189%2F209 %2890%29. 330-580aa similar to AAP58971.1 %28Q7X3I6%29 unknown protein from Francisella tularensis subsp. novicida %28251 aa%29. BLAST Score %3D 483 bits %281244%29%2C Expect %3D e-135 Identities %3D 243%2F251 %2896%29%2C Positives %3D 249%2F251 %2899%29. Identical to FTT1703. It is part of the duplicated region 1374371..1408281 which is identical to 1767715..1801625. Protein fusion product of two hypothetical proteins in F. novicida. ORF ftt1348;Dbxref=UniProtKB%2FTrEMBL:Q5NED4,Genbank:YP_170300.1,GeneID:3191578;gbkey=CDS;product=hypothetical protein;protein_id=YP_170300.1;transl_table=11
NC_006570.2	RefSeq	gene	1388283	1388804	.	+	.	ID=gene1379;Name=FTT_1349;Dbxref=GeneID:3191580;gbkey=Gene;locus_tag=FTT_1349
NC_006570.2	RefSeq	CDS	1388283	1388804	.	+	0	ID=cds1217;Name=YP_170301.1;Parent=gene1379;Note=Similar to AAP58972.1 %28Q7X3I5%29 unknown protein from Francisella novicida %28173 aa%29. BLAST Score %3D 336%2C Expect %3D 1e-91 Identities %3D 170%2F173 %2898%29%2C Positives %3D 171%2F173 %2898%29 Identical to FTT1704. It is part of the duplicated region 1374371..1408281 which is identical to 1767715..1801625 ORF ftt1349;Dbxref=UniProtKB%2FTrEMBL:Q5NED3,Genbank:YP_170301.1,GeneID:3191580;gbkey=CDS;product=hypothetical protein;protein_id=YP_170301.1;transl_table=11
NC_006570.2	RefSeq	gene	1388817	1390247	.	+	.	ID=gene1380;Name=FTT_1350;Dbxref=GeneID:3191581;gbkey=Gene;locus_tag=FTT_1350
NC_006570.2	RefSeq	CDS	1388817	1390247	.	+	0	ID=cds1218;Name=YP_170302.1;Parent=gene1380;Note=Similar to AAP58973.1 %28Q7X3I4%29 unknown protein from Francisella novicida %28476 aa%29. BLAST Score %3D 864 bits %282233%29%2C Expect %3D 0.0 Identities %3D 433%2F476 %2890%29%2CPositives %3D 437%2F476 %2891%29 Identical to FTT1705. It is part of the duplicated region 1374371..1408281 which is identical to 1767715..1801625 ORF ftt1350;Dbxref=UniProtKB%2FTrEMBL:Q5NED2,Genbank:YP_170302.1,GeneID:3191581;gbkey=CDS;product=hypothetical protein;protein_id=YP_170302.1;transl_table=11
NC_006570.2	RefSeq	gene	1390260	1390883	.	+	.	ID=gene1381;Name=FTT_1351;Dbxref=GeneID:3191586;gbkey=Gene;locus_tag=FTT_1351
NC_006570.2	RefSeq	CDS	1390260	1390883	.	+	0	ID=cds1219;Name=YP_170303.1;Parent=gene1381;Note=Similar to AAP58974.1 %28Q7X3I3%29 unknown protein from Francisella novicida %28207 aa%29. BLAST Score %3D 391 bits %281005%29%2C Expect %3D e-108 Identities %3D 194%2F207 %2893%29%2CPositives %3D 195%2F207 %2894%29 Identical to FTT1706. It is part of the duplicated region 1374371..1408281 which is identical to 1767715..1801625 ORF ftt1351;Dbxref=UniProtKB%2FTrEMBL:Q5NED1,Genbank:YP_170303.1,GeneID:3191586;gbkey=CDS;product=hypothetical protein;protein_id=YP_170303.1;transl_table=11
NC_006570.2	RefSeq	gene	1390905	1392056	.	+	.	ID=gene1382;Name=FTT_1352;Dbxref=GeneID:3191588;gbkey=Gene;locus_tag=FTT_1352
NC_006570.2	RefSeq	CDS	1390905	1392056	.	+	0	ID=cds1220;Name=YP_170304.1;Parent=gene1382;Note=Similar to AAP58975.1 %28Q7X3I2%29 unknown protein from Francisella novicida %28262 aa%29%2C BLAST Score %3D 443 bits %281140%29%2C Expect %3D e-12 Identities %3D 229%2F262 %2887%29%2CPositives %3D 235%2F262 %2889%29 This protein is identical to FTT1707. It is part of the duplicated region 1374371..1408281 which is identical to 1767715..1801625 ORF ftt1352;Dbxref=UniProtKB%2FTrEMBL:Q5NED0,Genbank:YP_170304.1,GeneID:3191588;gbkey=CDS;product=hypothetical protein;protein_id=YP_170304.1;transl_table=11
NC_006570.2	RefSeq	gene	1392022	1392795	.	+	.	ID=gene1383;Name=FTT_1353;Dbxref=GeneID:3191589;gbkey=Gene;locus_tag=FTT_1353
NC_006570.2	RefSeq	CDS	1392022	1392795	.	+	0	ID=cds1221;Name=YP_170305.1;Parent=gene1383;Note=Similar to AAP58976.1 %28Q7X3I1%29 unknown protein from Francisella novicida %28257 aa%29. BLAST Score %3D 412%2C Expect %3D e-114 Identities %3D 213%2F257 %2882%29%2C Positives %3D 213%2F257 %2882%29 Identical to FTT1708. It is part of the duplicated region 1374371..1408281 which is identical to 1767715..1801625. ORF ftt1353;Dbxref=UniProtKB%2FTrEMBL:Q5NF87,Genbank:YP_170305.1,GeneID:3191589;gbkey=CDS;product=hypothetical protein;protein_id=YP_170305.1;transl_table=11
NC_006570.2	RefSeq	gene	1392835	1396821	.	+	.	ID=gene1384;Name=pdpC1;Dbxref=GeneID:3191593;gbkey=Gene;gene=pdpC1;locus_tag=FTT_1354
NC_006570.2	RefSeq	CDS	1392835	1396821	.	+	0	ID=cds1222;Name=YP_170306.1;Parent=gene1384;Note=Similar to AAP58966.1 PdpC from Francisella novicida %281218 aa%29. BLAST Score %3D 2172%2C Expect %3D 0.0 Identities %3D 1089%2F1220 %2889%29%2C Positives %3D 1120%2F1220 %2891%29%2CGaps %3D 3%2F1220 %280%29 Identical to FTT1709. It is part of the duplicated region 1374371..1408281 which is identical to 1767715..1801625;Dbxref=UniProtKB%2FTrEMBL:Q5NEC8,Genbank:YP_170306.1,GeneID:3191593;gbkey=CDS;product=hypothetical protein;protein_id=YP_170306.1;transl_table=11
NC_006570.2	RefSeq	gene	1396839	1397414	.	+	.	ID=gene1385;Name=FTT_1355;Dbxref=GeneID:3191594;gbkey=Gene;locus_tag=FTT_1355
NC_006570.2	RefSeq	CDS	1396839	1397414	.	+	0	ID=cds1223;Name=YP_170307.1;Parent=gene1385;Note=Similar to AAP58977.1 %28Q7X3I0%29 unknown protein from Francisella novicida %28188 aa%29. BLAST Score %3D 321%2C Expect %3D 3e-87 Identities %3D 156%2F174 %2889%29%2C Positives %3D 162%2F174 %2893%29 Identical to FTT1710. It is part of the duplicated region 1374371..1408281 which is identical to 1767715..1801625 ORF ftt1355;Dbxref=UniProtKB%2FTrEMBL:Q5NEC7,Genbank:YP_170307.1,GeneID:3191594;gbkey=CDS;product=hypothetical protein;protein_id=YP_170307.1;transl_table=11
NC_006570.2	RefSeq	gene	1397421	1398626	.	-	.	ID=gene1386;Name=iglD1;Dbxref=GeneID:3191518;gbkey=Gene;gene=iglD1;locus_tag=FTT_1356c
NC_006570.2	RefSeq	CDS	1397421	1398626	.	-	0	ID=cds1224;Name=YP_170308.1;Parent=gene1386;Note=Similar to AAP58965.1 %28Q7C3J6%29 IglD from Francisella novicida %28398 aa%29. BLAST Score %3D 746%2C Expect %3D 0.0 Identities %3D 382%2F398 %2895%29%2C Positives %3D 383%2F398 %2896%29 Identical to FTT1711. It is part of the duplicated region 1374371..1408281 which is identical to 1767715..1801625;Dbxref=UniProtKB%2FTrEMBL:Q5NEC6,Genbank:YP_170308.1,GeneID:3191518;gbkey=CDS;product=intracellular growth locus%2C subunit D;protein_id=YP_170308.1;transl_table=11
NC_006570.2	RefSeq	gene	1398638	1399273	.	-	.	ID=gene1387;Name=iglC1;Dbxref=GeneID:3191591;gbkey=Gene;gene=iglC1;locus_tag=FTT_1357c
NC_006570.2	RefSeq	CDS	1398638	1399273	.	-	0	ID=cds1225;Name=YP_170309.1;Parent=gene1387;Note=Similar to AAP58964.1 %28Q7X3J5%29 IglC %2823 kDa protein%29 from Francisella novicida %28211 aa%29. BLAST Score %3D 405%2C Expect %3D e-112 Identities %3D 209%2F211 %2899%29%2C Positives %3D 210%2F211 %2899%29 Identical to FTT1712. It is part of the duplicated region 1374371..1408281 which is identical to 1767715..1801625;Dbxref=UniProtKB%2FTrEMBL:Q5NEC5,Genbank:YP_170309.1,GeneID:3191591;gbkey=CDS;product=intracellular growth locus%2C subunit C;protein_id=YP_170309.1;transl_table=11
NC_006570.2	RefSeq	gene	1399284	1400828	.	-	.	ID=gene1388;Name=iglB1;Dbxref=GeneID:3191564;gbkey=Gene;gene=iglB1;locus_tag=FTT_1358c
NC_006570.2	RefSeq	CDS	1399284	1400828	.	-	0	ID=cds1226;Name=YP_170310.1;Parent=gene1388;Note=Similar to AAP58963.1 %28Q7X3J4%29 IglB from Francisella novicida %28514 aa%29. BLAST Score %3D 997%2C Expect %3D 0.0 Identities %3D 496%2F514 %2896%29%2C Positives %3D 499%2F514 %2897%29 Identical to FTT1713. It is part of the duplicated region 1374371..1408281 which is identical to 1767715..1801625;Dbxref=InterPro:IPR010269,UniProtKB%2FTrEMBL:Q5NEC4,Genbank:YP_170310.1,GeneID:3191564;gbkey=CDS;product=intracellular growth locus%2C subunit B;protein_id=YP_170310.1;transl_table=11
NC_006570.2	RefSeq	gene	1400818	1401408	.	-	.	ID=gene1389;Name=iglA1;Dbxref=GeneID:3191217;gbkey=Gene;gene=iglA1;locus_tag=FTT_1359c
NC_006570.2	RefSeq	CDS	1400818	1401408	.	-	0	ID=cds1227;Name=YP_170311.1;Parent=gene1389;Note=Similar to AAP58962.1 %28Q7X3J5%29 IglA from Francisella novicida %28184 aa%29. BLAST Score %3D 350%2C Expect %3D 6e-96 Identities %3D 181%2F184 %2898%29%2C Positives %3D 181%2F184 %2898%29 Identical to FTT1714. It is part of the duplicated region 1374371..1408281 which is identical to 1767715..1801625;Dbxref=InterPro:IPR008312,UniProtKB%2FTrEMBL:Q5NEC3,Genbank:YP_170311.1,GeneID:3191217;gbkey=CDS;product=intracellular growth locus%2C subunit A;protein_id=YP_170311.1;transl_table=11
NC_006570.2	RefSeq	gene	1401453	1405040	.	-	.	ID=gene1390;Name=pdpD1;Dbxref=GeneID:3191310;gbkey=Gene;gene=pdpD1;locus_tag=FTT_1360c
NC_006570.2	RefSeq	CDS	1401453	1405040	.	-	0	ID=cds1228;Name=YP_170312.1;Parent=gene1390;Note=Similar to AAP58961.1 %28Q7C3J6%29 PdpD from Francisella novicida %281245 aa%29. BLAST Score %3D 2194%2C Expect %3D 0.0 Identities %3D 1133%2F1245 %2891%29%2C Positives %3D 1154%2F1245 %2892%29%2C Gaps %3D 50%2F1245 %284%29 Identical to FTT1715. It is part of the duplicated region 1374371..1408281 which is identical to 1767715..1801625;Dbxref=UniProtKB%2FTrEMBL:Q5NEC2,Genbank:YP_170312.1,GeneID:3191310;gbkey=CDS;product=hypothetical protein;protein_id=YP_170312.1;transl_table=11
NC_006570.2	RefSeq	gene	1405143	1406285	.	-	.	ID=gene1391;Name=FTT_1361c;Dbxref=GeneID:3191595;gbkey=Gene;locus_tag=FTT_1361c;pseudo=true
NC_006570.2	RefSeq	gene	1406420	1408582	.	+	.	ID=gene1392;Name=FTT_1362;Dbxref=GeneID:3191597;gbkey=Gene;locus_tag=FTT_1362;pseudo=true
NC_006570.2	RefSeq	repeat_region	1407297	1407308	.	-	.	ID=id208;Note=ISFtu1 12bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	gene	1407396	1408180	.	-	.	ID=gene1393;Name=isftu1;Dbxref=GeneID:3190873;gbkey=Gene;gene=isftu1;locus_tag=FTT_1363c
NC_006570.2	RefSeq	CDS	1407854	1408180	.	-	0	ID=cds1229;Name=YP_170313.1;Parent=gene1393;Note=ISFtu1. Transposase%2C member of the IS630 Tc-1 mariner family. Identical to Q93EJ6  transposase from Francisella tularensis %28118 aa%29 from aa 144-261. Identical to Q93EJ7  transposase from Francisella tularensis %28126 aa%29 from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF%27s. ORF1 %28identical to Q93EJ7%29 contains a programmed ribosomal frameshifting motif%2C 5%27-AAAAAAAG-3%27 at aa position 109 which permits frameshifting to ORF2 %28identical to Q93EJ6%29 to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family%2C and also mariner elements%2C show that this transposase shares strongly conserved residues%2C including a fully conserved dipeptide%2CAsp-Glu %28DE%29%2C and a block consisting of a fully conserved Asp and highly conserved Glu%2C separated by 34 or 35 residues %28D35E%29. The conserved dipeptide is only present if ribosomal frameshifting occurs.;Dbxref=UniProtKB%2FTrEMBL:Q5NIH2,Genbank:YP_170313.1,GeneID:3190873;gbkey=CDS;product=transposase;protein_id=YP_170313.1;transl_table=11
NC_006570.2	RefSeq	CDS	1407396	1407854	.	-	0	ID=cds1229;Name=YP_170313.1;Parent=gene1393;Note=ISFtu1. Transposase%2C member of the IS630 Tc-1 mariner family. Identical to Q93EJ6  transposase from Francisella tularensis %28118 aa%29 from aa 144-261. Identical to Q93EJ7  transposase from Francisella tularensis %28126 aa%29 from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF%27s. ORF1 %28identical to Q93EJ7%29 contains a programmed ribosomal frameshifting motif%2C 5%27-AAAAAAAG-3%27 at aa position 109 which permits frameshifting to ORF2 %28identical to Q93EJ6%29 to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family%2C and also mariner elements%2C show that this transposase shares strongly conserved residues%2C including a fully conserved dipeptide%2CAsp-Glu %28DE%29%2C and a block consisting of a fully conserved Asp and highly conserved Glu%2C separated by 34 or 35 residues %28D35E%29. The conserved dipeptide is only present if ribosomal frameshifting occurs.;Dbxref=UniProtKB%2FTrEMBL:Q5NIH2,Genbank:YP_170313.1,GeneID:3190873;gbkey=CDS;product=transposase;protein_id=YP_170313.1;transl_table=11
NC_006570.2	RefSeq	repeat_region	1408201	1408216	.	-	.	ID=id209;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	1408217	1408232	.	-	.	ID=id210;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	1408233	1408244	.	-	.	ID=id211;Note=ISFtu1 12bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	gene	1408560	1410035	.	+	.	ID=gene1394;Name=treA;Dbxref=GeneID:3191470;gbkey=Gene;gene=treA;locus_tag=FTT_1364;pseudo=true
NC_006570.2	RefSeq	gene	1410206	1411270	.	-	.	ID=gene1395;Name=fbaB;Dbxref=GeneID:3191878;gbkey=Gene;gene=fbaB;locus_tag=FTT_1365c
NC_006570.2	RefSeq	CDS	1410206	1411270	.	-	0	ID=cds1230;Name=YP_170314.1;Parent=gene1395;Note=class II aldolase%3B catalyzes the reversible aldol condensation of dihydroxyacetonephosphate and glyceraldehyde 3-phosphate in the Calvin cycle%2C glycolysis and gluconeogenesis;Dbxref=GOA:Q5NF78,InterPro:IPR013785,UniProtKB%2FTrEMBL:Q5NF78,Genbank:YP_170314.1,GeneID:3191878;gbkey=CDS;product=fructose-1%2C6-bisphosphate aldolase;protein_id=YP_170314.1;transl_table=11
NC_006570.2	RefSeq	gene	1411283	1412719	.	-	.	ID=gene1396;Name=pyk;Dbxref=GeneID:3191657;gbkey=Gene;gene=pyk;locus_tag=FTT_1366c
NC_006570.2	RefSeq	CDS	1411283	1412719	.	-	0	ID=cds1231;Name=YP_170315.1;Parent=gene1396;Note=Similar to AAO91275 %28Q83AU7%29 Pyruvate kinase from Coxiella burnetii %28477 aa%29. FASTA: opt: 1622 Z-score: 1687.6 E%28%29: 3.8e-86 Smith-Waterman score: 1622%3B 53.249identity in 477 aa overlap domain%2C score 55.8%2C E-value 8.1e-14;Dbxref=GOA:Q5NF77,InterPro:IPR015813,UniProtKB%2FTrEMBL:Q5NF77,Genbank:YP_170315.1,GeneID:3191657;gbkey=CDS;product=pyruvate kinase;protein_id=YP_170315.1;transl_table=11
NC_006570.2	RefSeq	gene	1412735	1413913	.	-	.	ID=gene1397;Name=pgk;Dbxref=GeneID:3191360;gbkey=Gene;gene=pgk;locus_tag=FTT_1367c
NC_006570.2	RefSeq	CDS	1412735	1413913	.	-	0	ID=cds1232;Name=YP_170316.1;Parent=gene1397;Note=Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway;Dbxref=GOA:Q5NF76,InterPro:IPR015911,UniProtKB%2FSwiss-Prot:Q5NF76,Genbank:YP_170316.1,GeneID:3191360;gbkey=CDS;product=phosphoglycerate kinase;protein_id=YP_170316.1;transl_table=11
NC_006570.2	RefSeq	gene	1413932	1414978	.	-	.	ID=gene1398;Name=gapA;Dbxref=GeneID:3191592;gbkey=Gene;gene=gapA;locus_tag=FTT_1368c
NC_006570.2	RefSeq	CDS	1413932	1414978	.	-	0	ID=cds1233;Name=YP_170317.1;Parent=gene1398;Note=Similar to Q8XKT9 Glyceraldehyde-3-phosphate dehydrogenase from Clostridium perfringens %28332 aa%29. FASTA: opt: 1511 Z-score: 1671.9 E%28%29: 2.8e-85 Smith-Waterman score: 1511%3B 71.341identity in 328 aa overlap;Dbxref=GOA:Q5NF75,InterPro:IPR016040,UniProtKB%2FTrEMBL:Q5NF75,Genbank:YP_170317.1,GeneID:3191592;gbkey=CDS;product=glyceraldehyde-3-phosphate dehydrogenase;protein_id=YP_170317.1;transl_table=11
NC_006570.2	RefSeq	gene	1414971	1416962	.	-	.	ID=gene1399;Name=tktA;Dbxref=GeneID:3190783;gbkey=Gene;gene=tktA;locus_tag=FTT_1369c
NC_006570.2	RefSeq	CDS	1414971	1416962	.	-	0	ID=cds1234;Name=YP_170318.1;Parent=gene1399;Note=catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate%3B can transfer ketol groups between several groups%3B in Escherichia coli there are two tkt genes%2C tktA expressed during exponential growth and the tktB during stationary phase;Dbxref=GOA:Q5NF74,InterPro:IPR015941,UniProtKB%2FTrEMBL:Q5NF74,Genbank:YP_170318.1,GeneID:3190783;gbkey=CDS;product=transketolase;protein_id=YP_170318.1;transl_table=11
NC_006570.2	RefSeq	gene	1417102	1417605	.	+	.	ID=gene1400;Name=FTT_1370;Dbxref=GeneID:3191598;gbkey=Gene;locus_tag=FTT_1370
NC_006570.2	RefSeq	CDS	1417102	1417605	.	+	0	ID=cds1235;Name=YP_170319.1;Parent=gene1400;Note=Similar to AAN42711 %28Q83LI4%29 Orf%2C conserved hypothetical protein from Shigella flexneri %28173 aa%29. FASTA: opt: 194 Z-score: 254.2 E%28%29: 2.6e-06 Smith-Waterman score: 194%3B 26.708 identity in 161 aa overlap ORF ftt1370;Dbxref=InterPro:IPR003772,UniProtKB%2FTrEMBL:Q5NF73,Genbank:YP_170319.1,GeneID:3191598;gbkey=CDS;product=hypothetical protein;protein_id=YP_170319.1;transl_table=11
NC_006570.2	RefSeq	gene	1417649	1417831	.	+	.	ID=gene1401;Name=rpmF;Dbxref=GeneID:3191613;gbkey=Gene;gene=rpmF;locus_tag=FTT_1371
NC_006570.2	RefSeq	CDS	1417649	1417831	.	+	0	ID=cds1236;Name=YP_170320.1;Parent=gene1401;Note=some L32 proteins have zinc finger motifs consisting of CXXC while others do not;Dbxref=GOA:Q5NF72,InterPro:IPR002677,UniProtKB%2FSwiss-Prot:Q5NF72,Genbank:YP_170320.1,GeneID:3191613;gbkey=CDS;product=50S ribosomal protein L32;protein_id=YP_170320.1;transl_table=11
NC_006570.2	RefSeq	gene	1417930	1418976	.	+	.	ID=gene1402;Name=plsX;Dbxref=GeneID:3191914;gbkey=Gene;gene=plsX;locus_tag=FTT_1372
NC_006570.2	RefSeq	CDS	1417930	1418976	.	+	0	ID=cds1237;Name=YP_170321.1;Parent=gene1402;Note=involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis%3B functions with PlsY;Dbxref=GOA:Q5NF71,InterPro:IPR012281,UniProtKB%2FSwiss-Prot:Q5NF71,Genbank:YP_170321.1,GeneID:3191914;gbkey=CDS;product=glycerol-3-phosphate acyltransferase PlsX;protein_id=YP_170321.1;transl_table=11
NC_006570.2	RefSeq	gene	1419073	1420044	.	+	.	ID=gene1403;Name=fabH;Dbxref=GeneID:3191865;gbkey=Gene;gene=fabH;locus_tag=FTT_1373
NC_006570.2	RefSeq	CDS	1419073	1420044	.	+	0	ID=cds1238;Name=YP_170322.1;Parent=gene1403;Note=Similar to Q9JW56  3-oxoacyl-%5Bacyl-carrier-protein%5D synthase III from Neisseria meningitidis %28320 aa%29. FASTA: opt: 1148 Z-score: 1323.1 E%28%29: 7.6e-66 Smith-Waterman score: 1148%3B 54.859 identity in 319 aa overlap;Dbxref=GOA:Q5NF70,InterPro:IPR016038,UniProtKB%2FTrEMBL:Q5NF70,Genbank:YP_170322.1,GeneID:3191865;gbkey=CDS;product=3-oxoacyl-ACP synthase;protein_id=YP_170322.1;transl_table=11
NC_006570.2	RefSeq	gene	1420092	1421012	.	+	.	ID=gene1404;Name=FTT_1374;Dbxref=GeneID:3191602;gbkey=Gene;locus_tag=FTT_1374
NC_006570.2	RefSeq	CDS	1420092	1421012	.	+	0	ID=cds1239;Name=YP_170323.1;Parent=gene1404;Note=Similar to Q9CJS7 FabD from Pasteurella multocida %28312 aa%29. FASTA: opt: 984 Z-score: 1099.0 E%28%29: 2.3e-53 Smith-Waterman score: 984%3B50.163 identity in 307 aa overlap ORF ftt1374;Dbxref=GOA:Q5NF69,InterPro:IPR014043,UniProtKB%2FTrEMBL:Q5NF69,Genbank:YP_170323.1,GeneID:3191602;gbkey=CDS;product=malonyl CoA-ACP transacylase;protein_id=YP_170323.1;transl_table=11
NC_006570.2	RefSeq	gene	1421026	1421769	.	+	.	ID=gene1405;Name=fabG;Dbxref=GeneID:3191861;gbkey=Gene;gene=fabG;locus_tag=FTT_1375
NC_006570.2	RefSeq	CDS	1421026	1421769	.	+	0	ID=cds1240;Name=YP_170324.1;Parent=gene1405;Note=Similar to Q9CJS6 FabG from Pasteurella multocida %28242 aa%29. FASTA: opt: 1029 Z-score: 1192.2 E%28%29: 1.5e-58 Smith-Waterman score: 1029%3B 66.667 identity in 240 aa overlap;Dbxref=GOA:Q5NF68,InterPro:IPR016040,UniProtKB%2FTrEMBL:Q5NF68,Genbank:YP_170324.1,GeneID:3191861;gbkey=CDS;product=3-oxoacyl-ACP reductase;protein_id=YP_170324.1;transl_table=11
NC_006570.2	RefSeq	gene	1421865	1422149	.	+	.	ID=gene1406;Name=acpP;Dbxref=GeneID:3192405;gbkey=Gene;gene=acpP;locus_tag=FTT_1376
NC_006570.2	RefSeq	CDS	1421865	1422149	.	+	0	ID=cds1241;Name=YP_170325.1;Parent=gene1406;Note=carries the fatty acid chain in fatty acid biosynthesis;Dbxref=GOA:Q5NF67,InterPro:IPR009081,UniProtKB%2FTrEMBL:Q5NF67,Genbank:YP_170325.1,GeneID:3192405;gbkey=CDS;product=acyl carrier protein;protein_id=YP_170325.1;transl_table=11
NC_006570.2	RefSeq	gene	1422229	1423488	.	+	.	ID=gene1407;Name=fabF;Dbxref=GeneID:3191863;gbkey=Gene;gene=fabF;locus_tag=FTT_1377
NC_006570.2	RefSeq	CDS	1422229	1423488	.	+	0	ID=cds1242;Name=YP_170326.1;Parent=gene1407;Note=Similar to Q8Y0J0 Probable 3-oxoacyl-%5Bacyl-carrier-protein%5D synthase II from Ralstonia solanacearum %28410 aa%29. FASTA: opt: 1679 Z-score: 1887.3 E%28%29: 2.8e-97 Smith-Waterman score: 1679%3B 59.233 identity in 417 aa overlap;Dbxref=GOA:Q5NF66,InterPro:IPR018201,UniProtKB%2FTrEMBL:Q5NF66,Genbank:YP_170326.1,GeneID:3191863;gbkey=CDS;product=3-oxoacyl-ACP synthase;protein_id=YP_170326.1;transl_table=11
NC_006570.2	RefSeq	gene	1423539	1423733	.	+	.	ID=gene1408;Name=FTT_1378;Dbxref=GeneID:8303682;gbkey=Gene;locus_tag=FTT_1378;pseudo=true
NC_006570.2	RefSeq	gene	1423796	1424529	.	-	.	ID=gene1409;Name=FTT_1379c;Dbxref=GeneID:3191482;gbkey=Gene;locus_tag=FTT_1379c;pseudo=true
NC_006570.2	RefSeq	gene	1424627	1425846	.	+	.	ID=gene1410;Name=FTT_1380;Dbxref=GeneID:3191483;gbkey=Gene;locus_tag=FTT_1380;pseudo=true
NC_006570.2	RefSeq	gene	1425930	1426979	.	+	.	ID=gene1411;Name=FTT_1381;Dbxref=GeneID:3191484;gbkey=Gene;locus_tag=FTT_1381;pseudo=true
NC_006570.2	RefSeq	gene	1427069	1427857	.	+	.	ID=gene1412;Name=suhB;Dbxref=GeneID:3190744;gbkey=Gene;gene=suhB;locus_tag=FTT_1382
NC_006570.2	RefSeq	CDS	1427069	1427857	.	+	0	ID=cds1243;Name=YP_170327.1;Parent=gene1412;Note=Similar to P22783 Inositol-1-monophosphatase from E. coli %28267 aa%29. FASTA: opt: 630 Z-score: 759.0 E%28%29: 2e-34 Smith-Waterman score: 656%3B 36.882identity in 263 aa overlap;Dbxref=GOA:Q5NF65,InterPro:IPR000760,UniProtKB%2FTrEMBL:Q5NF65,Genbank:YP_170327.1,GeneID:3190744;gbkey=CDS;product=inositol monophosphatase;protein_id=YP_170327.1;transl_table=11
NC_006570.2	RefSeq	gene	1427857	1429137	.	+	.	ID=gene1413;Name=sun;Dbxref=GeneID:3190743;gbkey=Gene;gene=sun;locus_tag=FTT_1383
NC_006570.2	RefSeq	CDS	1427857	1429137	.	+	0	ID=cds1244;Name=YP_170328.1;Parent=gene1413;Note=Similar to P44788 SUN protein %28FMU protein%29 from Haemophilus influenzae %28451 aa%29. FASTA: opt: 956 Z-score: 1079.4 E%28%29: 2.9e-52 Smith-Waterman score: 956%3B 39.401 identity in 434 aa overlap;Dbxref=GOA:Q5NF64,InterPro:IPR006027,UniProtKB%2FTrEMBL:Q5NF64,Genbank:YP_170328.1,GeneID:3190743;gbkey=CDS;product=Sun protein;protein_id=YP_170328.1;transl_table=11
NC_006570.2	RefSeq	gene	1429115	1429606	.	-	.	ID=gene1414;Name=FTT_1384c;Dbxref=GeneID:3191485;gbkey=Gene;locus_tag=FTT_1384c
NC_006570.2	RefSeq	CDS	1429115	1429606	.	-	0	ID=cds1245;Name=YP_170329.1;Parent=gene1414;Note=Similar to Q8D9X5 Probable acetyltransferase from Vibrio vulnificus %28141 aa%29. FASTA: opt: 183 Z-score: 242.0 E%28%29: 1.3e-05 Smith-Waterman score: 183%3B 27.132 identity in 129 aa overlap ORF ftt1384c;Dbxref=GOA:Q5NF63,InterPro:IPR016181,UniProtKB%2FTrEMBL:Q5NF63,Genbank:YP_170329.1,GeneID:3191485;gbkey=CDS;product=acetyltransferase;protein_id=YP_170329.1;transl_table=11
NC_006570.2	RefSeq	gene	1429699	1429968	.	-	.	ID=gene1415;Name=FTT_1385c;Dbxref=GeneID:3191487;gbkey=Gene;locus_tag=FTT_1385c
NC_006570.2	RefSeq	CDS	1429699	1429968	.	-	0	ID=cds1246;Name=YP_170330.2;Parent=gene1415;Note=ORF ftt1385c;Dbxref=UniProtKB%2FTrEMBL:Q5NF62,Genbank:YP_170330.2,GeneID:3191487;gbkey=CDS;product=hypothetical protein;protein_id=YP_170330.2;transl_table=11
NC_006570.2	RefSeq	repeat_region	1429893	1429906	.	+	.	ID=id212;Note=ISFtu1 14bp terminal inverted repeat. Substitution at position 12 of a C with a T;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	1429907	1429922	.	+	.	ID=id213;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	1429923	1429938	.	+	.	ID=id214;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;gbkey=repeat_region
NC_006570.2	RefSeq	gene	1429959	1430743	.	+	.	ID=gene1416;Name=isftu1;Dbxref=GeneID:3190917;gbkey=Gene;gene=isftu1;locus_tag=FTT_1386
NC_006570.2	RefSeq	CDS	1429959	1430285	.	+	0	ID=cds1247;Name=YP_170331.1;Parent=gene1416;Note=ISFtu1. Transposase%2C member of the IS630 Tc-1 mariner family. Identical to Q93EJ6  transposase from Francisella tularensis %28118 aa%29 from aa 144-261. Identical to Q93EJ7  transposase from Francisella tularensis %28126 aa%29 from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF%27s. ORF1 %28identical to Q93EJ7%29 contains a programmed ribosomal frameshifting motif%2C 5%27-AAAAAAAG-3%27 at aa position 109 which permits frameshifting to ORF2 %28identical to Q93EJ6%29 to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family%2C and also mariner elements%2C show that this transposase shares strongly conserved residues%2C including a fully conserved dipeptide%2CAsp-Glu %28DE%29%2C and a block consisting of a fully conserved Asp and highly conserved Glu%2C separated by 34 or 35 residues %28D35E%29. The conserved dipeptide is only present if ribosomal frameshifting occurs.;Dbxref=UniProtKB%2FTrEMBL:Q5NIH2,Genbank:YP_170331.1,GeneID:3190917;gbkey=CDS;product=transposase;protein_id=YP_170331.1;transl_table=11
NC_006570.2	RefSeq	CDS	1430285	1430743	.	+	0	ID=cds1247;Name=YP_170331.1;Parent=gene1416;Note=ISFtu1. Transposase%2C member of the IS630 Tc-1 mariner family. Identical to Q93EJ6  transposase from Francisella tularensis %28118 aa%29 from aa 144-261. Identical to Q93EJ7  transposase from Francisella tularensis %28126 aa%29 from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF%27s. ORF1 %28identical to Q93EJ7%29 contains a programmed ribosomal frameshifting motif%2C 5%27-AAAAAAAG-3%27 at aa position 109 which permits frameshifting to ORF2 %28identical to Q93EJ6%29 to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family%2C and also mariner elements%2C show that this transposase shares strongly conserved residues%2C including a fully conserved dipeptide%2CAsp-Glu %28DE%29%2C and a block consisting of a fully conserved Asp and highly conserved Glu%2C separated by 34 or 35 residues %28D35E%29. The conserved dipeptide is only present if ribosomal frameshifting occurs.;Dbxref=UniProtKB%2FTrEMBL:Q5NIH2,Genbank:YP_170331.1,GeneID:3190917;gbkey=CDS;product=transposase;protein_id=YP_170331.1;transl_table=11
NC_006570.2	RefSeq	repeat_region	1430831	1430842	.	+	.	ID=id215;Note=ISFtu1 12bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	gene	1431189	1433225	.	-	.	ID=gene1417;Name=ligN;Dbxref=GeneID:3190767;gbkey=Gene;gene=ligN;locus_tag=FTT_1387c
NC_006570.2	RefSeq	CDS	1431189	1433225	.	-	0	ID=cds1248;Name=YP_170332.1;Parent=gene1417;Note=Similar to P43813 DNA ligase from Haemophilus influenzae %28679 aa%29. FASTA: opt: 2154 Z-score: 2353.2 E%28%29: 3.2e-123 Smith-Waterman score: 2154%3B 48.817 identity in 676 aa overlap;Dbxref=GOA:Q5NF60,InterPro:IPR018239,UniProtKB%2FSwiss-Prot:Q5NF60,Genbank:YP_170332.1,GeneID:3190767;gbkey=CDS;product=DNA ligase;protein_id=YP_170332.1;transl_table=11
NC_006570.2	RefSeq	gene	1433533	1434249	.	+	.	ID=gene1418;Name=FTT_1388;Dbxref=GeneID:3191491;gbkey=Gene;locus_tag=FTT_1388
NC_006570.2	RefSeq	CDS	1433533	1434249	.	+	0	ID=cds1249;Name=YP_170333.1;Parent=gene1418;Note=Similar to AAO81619 %28Q833S4%29 Conserved domain protein from Enterococcus faecalis %28281 aa%29. FASTA: opt: 171 Z-score: 214.0 E%28%29: 0.00046 Smith-Waterman score: 194%3B26.337 identity in 243 aa overlap ORF ftt1388;Dbxref=InterPro:IPR018931,UniProtKB%2FTrEMBL:Q5NF59,Genbank:YP_170333.1,GeneID:3191491;gbkey=CDS;product=hypothetical protein;protein_id=YP_170333.1;transl_table=11
NC_006570.2	RefSeq	gene	1434251	1435045	.	+	.	ID=gene1419;Name=panB;Dbxref=GeneID:3191227;gbkey=Gene;gene=panB;locus_tag=FTT_1389
NC_006570.2	RefSeq	CDS	1434251	1435045	.	+	0	ID=cds1250;Name=YP_170334.1;Parent=gene1419;Note=catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5%2C10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate;Dbxref=GOA:Q5NF58,InterPro:IPR015813,UniProtKB%2FSwiss-Prot:Q5NF58,Genbank:YP_170334.1,GeneID:3191227;gbkey=CDS;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=YP_170334.1;transl_table=11
NC_006570.2	RefSeq	gene	1435032	1435817	.	+	.	ID=gene1420;Name=panC;Dbxref=GeneID:3191378;gbkey=Gene;gene=panC;locus_tag=FTT_1390
NC_006570.2	RefSeq	CDS	1435032	1435817	.	+	0	ID=cds1251;Name=YP_170335.1;Parent=gene1420;Note=Similar to AAO89975 %28Q83EA3%29 Pantoate-beta-alanine ligase from Coxiella burnetii %28257 aa%29. FASTA: opt: 692 Z-score: 830.8 E%28%29: 2e-38 Smith-Waterman score: 692%3B 40.927 identity in 259 aa overlap;Dbxref=GOA:Q5NF57,InterPro:IPR014729,UniProtKB%2FSwiss-Prot:Q5NF57,Genbank:YP_170335.1,GeneID:3191378;gbkey=CDS;product=pantoate-beta-alanine ligase;protein_id=YP_170335.1;transl_table=11
NC_006570.2	RefSeq	gene	1435811	1436146	.	+	.	ID=gene1421;Name=panD;Dbxref=GeneID:3191388;gbkey=Gene;gene=panD;locus_tag=FTT_1391
NC_006570.2	RefSeq	CDS	1435811	1436146	.	+	0	ID=cds1252;Name=YP_170336.1;Parent=gene1421;Note=Converts L-aspartate to beta-alanine and provides the major route of beta-alanine production in bacteria. Beta-alanine is essential for the biosynthesis of pantothenate %28vitamin B5%29;Dbxref=GOA:Q5NF56,InterPro:IPR009010,UniProtKB%2FSwiss-Prot:Q5NF56,Genbank:YP_170336.1,GeneID:3191388;gbkey=CDS;product=aspartate alpha-decarboxylase;protein_id=YP_170336.1;transl_table=11
NC_006570.2	RefSeq	gene	1436150	1436920	.	+	.	ID=gene1422;Name=FTT_1392;Dbxref=GeneID:3191493;gbkey=Gene;locus_tag=FTT_1392
NC_006570.2	RefSeq	CDS	1436150	1436920	.	+	0	ID=cds1253;Name=YP_170337.1;Parent=gene1422;Note=type III%3B catalyzes the formation of %28R%29-4%27-phosphopantothenate from %28R%29-pantothenate in coenzyme A biosynthesis%3B type III pantothenate kinases are not subject to feedback inhibition from coenzyme A and have a high Km for ATP;Dbxref=GOA:Q5NF55,InterPro:IPR004619,UniProtKB%2FSwiss-Prot:Q5NF55,Genbank:YP_170337.1,GeneID:3191493;gbkey=CDS;product=pantothenate kinase;protein_id=YP_170337.1;transl_table=11
NC_006570.2	RefSeq	gene	1436929	1438797	.	-	.	ID=gene1423;Name=recD;Dbxref=GeneID:3191640;gbkey=Gene;gene=recD;locus_tag=FTT_1393c
NC_006570.2	RefSeq	CDS	1436929	1438797	.	-	0	ID=cds1254;Name=YP_170338.1;Parent=gene1423;Note=Similar to Q9RPH5 RecD from Mycobacterium smegmatis %28554 aa%29. FASTA: opt: 593 Z-score: 627.7 E%28%29: 4.1e-27 Smith-Waterman score: 776%3B 32.510 identity in 486 aa overlap;Dbxref=GOA:Q5NF54,InterPro:IPR006344,UniProtKB%2FTrEMBL:Q5NF54,Genbank:YP_170338.1,GeneID:3191640;gbkey=CDS;product=exodeoxyribonuclease V subunit alpha;protein_id=YP_170338.1;transl_table=11
NC_006570.2	RefSeq	gene	1438763	1442416	.	-	.	ID=gene1424;Name=recB;Dbxref=GeneID:3191642;gbkey=Gene;gene=recB;locus_tag=FTT_1394c
NC_006570.2	RefSeq	CDS	1438763	1442416	.	-	0	ID=cds1255;Name=YP_170339.1;Parent=gene1424;Note=Similar to Q8EF45 Exodeoxyribonuclease V%2Cbeta subunit from Shewanella oneidensis %281259 aa%29. FASTA: opt: 742 Z-score: 770.7 E%28%29: 4.5e-35 Smith-Waterman score: 1544%3B 30.448identity in 1317 aa overlap;Dbxref=GOA:Q5NF53,InterPro:IPR014017,UniProtKB%2FTrEMBL:Q5NF53,Genbank:YP_170339.1,GeneID:3191642;gbkey=CDS;product=exodeoxyribonuclease V subunit beta;protein_id=YP_170339.1;transl_table=11
NC_006570.2	RefSeq	gene	1442488	1443918	.	-	.	ID=gene1425;Name=FTT_1395c;Dbxref=GeneID:3192384;gbkey=Gene;locus_tag=FTT_1395c
NC_006570.2	RefSeq	CDS	1442488	1443918	.	-	0	ID=cds1256;Name=YP_170340.1;Parent=gene1425;Note=Similar Q8A303 ATP-dependent DNA helicase from Bacteriodes thetaiotamicron %28511 aa%29. FASTA: opt: 496 Z-score: 533.4 E%28%29: 7.4e-22 Smith-Waterman score: 815%3B 32.200 identity in 500 aa overlap ORF ftt1395c;Dbxref=GOA:Q5NF52,InterPro:IPR013196,UniProtKB%2FTrEMBL:Q5NF52,Genbank:YP_170340.1,GeneID:3192384;gbkey=CDS;product=ATP-dependent DNA helicase;protein_id=YP_170340.1;transl_table=11
NC_006570.2	RefSeq	gene	1444061	1444639	.	-	.	ID=gene1426;Name=FTT_1396c;Dbxref=GeneID:3192382;gbkey=Gene;locus_tag=FTT_1396c
NC_006570.2	RefSeq	CDS	1444061	1444639	.	-	0	ID=cds1257;Name=YP_170341.1;Parent=gene1426;Note=Similar to AAO81663 %28Q833N3%29 Conserved hypothetical protein from Entercoccus faecalis %28203 aa%29. FASTA: opt: 155 Z-score: 198.6 E%28%29: 0.0033 Smith-Waterman score: 155%3B 25.850 identity in 147 aa overlap ORF ftt1396c;Dbxref=UniProtKB%2FTrEMBL:Q5NF51,Genbank:YP_170341.1,GeneID:3192382;gbkey=CDS;product=hypothetical protein;protein_id=YP_170341.1;transl_table=11
NC_006570.2	RefSeq	gene	1444575	1447814	.	-	.	ID=gene1427;Name=recC;Dbxref=GeneID:3191641;gbkey=Gene;gene=recC;locus_tag=FTT_1397c
NC_006570.2	RefSeq	CDS	1444575	1447814	.	-	0	ID=cds1258;Name=YP_170342.1;Parent=gene1427;Note=Similar to P44945 Exodeoxyribonuclease V gamma chain from Haemophilus influenzae %281121 aa%29. FASTA: opt: 1139 Z-score: 1214.3 E%28%29: 8.7e-60 Smith-Waterman score: 1433%3B 28.344 identity in 1129 aa overlap;Dbxref=GOA:Q5NF50,InterPro:IPR006697,UniProtKB%2FTrEMBL:Q5NF50,Genbank:YP_170342.1,GeneID:3191641;gbkey=CDS;product=exodeoxyribonuclease V subunit gamma;protein_id=YP_170342.1;transl_table=11
NC_006570.2	RefSeq	gene	1447894	1449476	.	-	.	ID=gene1428;Name=FTT_1398c;Dbxref=GeneID:3192302;gbkey=Gene;locus_tag=FTT_1398c;pseudo=true
NC_006570.2	RefSeq	gene	1449653	1450522	.	+	.	ID=gene1429;Name=FTT_1399;Dbxref=GeneID:3192469;gbkey=Gene;locus_tag=FTT_1399
NC_006570.2	RefSeq	CDS	1449653	1450522	.	+	0	ID=cds1259;Name=YP_170343.1;Parent=gene1429;Note=Similar to Q8KH10 Conserved hypothetical integral membrane %28299 aa%29. FASTA: opt: 516 Z-score: 612.8 E%28%29: 2.8e-26 Smith-Waterman score: 516%3B 29.818 identity in 275 aa overlap ORF ftt1399;Dbxref=GOA:Q5NF49,InterPro:IPR000620,UniProtKB%2FTrEMBL:Q5NF49,Genbank:YP_170343.1,GeneID:3192469;gbkey=CDS;product=hypothetical protein;protein_id=YP_170343.1;transl_table=11
NC_006570.2	RefSeq	gene	1450536	1450922	.	-	.	ID=gene1430;Name=FTT_1400c;Dbxref=GeneID:3190879;gbkey=Gene;locus_tag=FTT_1400c
NC_006570.2	RefSeq	CDS	1450536	1450922	.	-	0	ID=cds1260;Name=YP_170344.1;Parent=gene1430;Note=ORF ftt1400c;Dbxref=UniProtKB%2FTrEMBL:Q5NF48,Genbank:YP_170344.1,GeneID:3190879;gbkey=CDS;product=hypothetical protein;protein_id=YP_170344.1;transl_table=11
NC_006570.2	RefSeq	gene	1451079	1451744	.	+	.	ID=gene1431;Name=FTT_1401;Dbxref=GeneID:3190880;gbkey=Gene;locus_tag=FTT_1401
NC_006570.2	RefSeq	CDS	1451079	1451744	.	+	0	ID=cds1261;Name=YP_170345.1;Parent=gene1431;Note=Similar to Q8HA35 Repressor %28217 aa%29. FASTA: opt: 183 Z-score: 217.7 E%28%29: 0.00028 Smith-Waterman score: 225%3B 29.167 identity in 216 aa overlap ORF ftt1401;Dbxref=GOA:Q5NF47,InterPro:IPR019759,UniProtKB%2FTrEMBL:Q5NF47,Genbank:YP_170345.1,GeneID:3190880;gbkey=CDS;product=prophage repressor protein;protein_id=YP_170345.1;transl_table=11
NC_006570.2	RefSeq	gene	1451947	1452035	.	-	.	ID=gene1432;Name=tRNA-Leu %28TAA%29;Dbxref=GeneID:8303700;description=tRNA-Leu %28TAA%29;gbkey=Gene;gene=tRNA-Leu %28TAA%29;locus_tag=FTT_t25
NC_006570.2	RefSeq	tRNA	1451947	1452035	.	-	.	ID=rna31;Dbxref=GeneID:8303700;codons=2;gbkey=tRNA;product=tRNA-Leu
NC_006570.2	RefSeq	exon	1451947	1452035	.	-	.	ID=id216;Parent=rna31;Dbxref=GeneID:8303700;codons=2;gbkey=tRNA;product=tRNA-Leu
NC_006570.2	RefSeq	gene	1452041	1452114	.	-	.	ID=gene1433;Name=tRNA-Cys %28GCA%29;Dbxref=GeneID:8303721;description=tRNA-Cys %28GCA%29;gbkey=Gene;gene=tRNA-Cys %28GCA%29;locus_tag=FTT_t26
NC_006570.2	RefSeq	tRNA	1452041	1452114	.	-	.	ID=rna32;Dbxref=GeneID:8303721;codons=13;gbkey=tRNA;product=tRNA-Cys
NC_006570.2	RefSeq	exon	1452041	1452114	.	-	.	ID=id217;Parent=rna32;Dbxref=GeneID:8303721;codons=13;gbkey=tRNA;product=tRNA-Cys
NC_006570.2	RefSeq	gene	1452133	1452204	.	-	.	ID=gene1434;Name=tRNA-Gly %28GCC%29;Dbxref=GeneID:8303716;description=tRNA-Gly %28GCC%29;gbkey=Gene;gene=tRNA-Gly %28GCC%29;locus_tag=FTT_t27
NC_006570.2	RefSeq	tRNA	1452133	1452204	.	-	.	ID=rna33;Dbxref=GeneID:8303716;codons=61;gbkey=tRNA;product=tRNA-Gly
NC_006570.2	RefSeq	exon	1452133	1452204	.	-	.	ID=id218;Parent=rna33;Dbxref=GeneID:8303716;codons=61;gbkey=tRNA;product=tRNA-Gly
NC_006570.2	RefSeq	gene	1452316	1453950	.	-	.	ID=gene1435;Name=FTT_1402c;Dbxref=GeneID:3190795;gbkey=Gene;locus_tag=FTT_1402c
NC_006570.2	RefSeq	CDS	1452316	1453950	.	-	0	ID=cds1262;Name=YP_170346.1;Parent=gene1435;Note=ORF ftt1402c;Dbxref=UniProtKB%2FTrEMBL:Q5NF46,Genbank:YP_170346.1,GeneID:3190795;gbkey=CDS;product=hypothetical protein;protein_id=YP_170346.1;transl_table=11
NC_006570.2	RefSeq	gene	1453967	1454191	.	-	.	ID=gene1436;Name=feoA;Dbxref=GeneID:3191880;gbkey=Gene;gene=feoA;locus_tag=FTT_1403c
NC_006570.2	RefSeq	CDS	1453967	1454191	.	-	0	ID=cds1263;Name=YP_170347.1;Parent=gene1436;Note=Similar to P33649 Ferrous iron transport protein A from E. coli %2875 aa%29. FASTA: opt: 148 Z-score: 228.5 E%28%29: 7.1e-05 Smith-Waterman score: 148%3B 31.081 identity in 74 aa overlap;Dbxref=UniProtKB%2FTrEMBL:Q5NF45,Genbank:YP_170347.1,GeneID:3191880;gbkey=CDS;product=ferrous iron transport protein A;protein_id=YP_170347.1;transl_table=11
NC_006570.2	RefSeq	gene	1454300	1455007	.	+	.	ID=gene1437;Name=FTT_1404;Dbxref=GeneID:3190843;gbkey=Gene;locus_tag=FTT_1404
NC_006570.2	RefSeq	CDS	1454300	1455007	.	+	0	ID=cds1264;Name=YP_170348.1;Parent=gene1437;Note=Similar to Q8E9Y6 Cell division protein FtsN from Shewanella oneidensis %28231 aa%29. FASTA: opt: 157 Z-score: 187.2 E%28%29: 0.014 Smith-Waterman score: 180%3B 27.094 identity in 203 aa overlap ORF ftt1404;Dbxref=GOA:Q5NF44,InterPro:IPR007730,UniProtKB%2FTrEMBL:Q5NF44,Genbank:YP_170348.1,GeneID:3190843;gbkey=CDS;product=cell division protein;protein_id=YP_170348.1;transl_table=11
NC_006570.2	RefSeq	gene	1455085	1455843	.	-	.	ID=gene1438;Name=gloB;Dbxref=GeneID:3192409;gbkey=Gene;gene=gloB;locus_tag=FTT_1405c
NC_006570.2	RefSeq	CDS	1455085	1455843	.	-	0	ID=cds1265;Name=YP_170349.1;Parent=gene1438;Note=Similar to Q47677 Probable hydroxyacylglutathione hydrolase from E. coli %28251 aa%29. FASTA: opt: 426 Z-score: 519.2 E%28%29: 4.6e-21 Smith-Waterman score: 426%3B 36.290 identity in 248 aa overlap;Dbxref=GOA:Q5NF43,InterPro:IPR001279,UniProtKB%2FSwiss-Prot:Q5NF43,Genbank:YP_170349.1,GeneID:3192409;gbkey=CDS;product=hydroxyacylglutathione hydrolase;protein_id=YP_170349.1;transl_table=11
NC_006570.2	RefSeq	gene	1455857	1457014	.	-	.	ID=gene1439;Name=FTT_1406c;Dbxref=GeneID:3190867;gbkey=Gene;locus_tag=FTT_1406c
NC_006570.2	RefSeq	CDS	1455857	1457014	.	-	0	ID=cds1266;Name=YP_170350.1;Parent=gene1439;Note=ORF ftt1406c;Dbxref=UniProtKB%2FTrEMBL:Q5NF42,Genbank:YP_170350.1,GeneID:3190867;gbkey=CDS;product=hypothetical protein;protein_id=YP_170350.1;transl_table=11
NC_006570.2	RefSeq	gene	1457011	1458096	.	-	.	ID=gene1440;Name=FTT_1407c;Dbxref=GeneID:3192327;gbkey=Gene;locus_tag=FTT_1407c
NC_006570.2	RefSeq	CDS	1457011	1458096	.	-	0	ID=cds1267;Name=YP_170351.1;Parent=gene1440;Note=ORF ftt1407c;Dbxref=UniProtKB%2FTrEMBL:Q5NF41,Genbank:YP_170351.1,GeneID:3192327;gbkey=CDS;product=hypothetical protein;protein_id=YP_170351.1;transl_table=11
NC_006570.2	RefSeq	gene	1458062	1458811	.	-	.	ID=gene1441;Name=hemD;Dbxref=GeneID:3192417;gbkey=Gene;gene=hemD;locus_tag=FTT_1408c
NC_006570.2	RefSeq	CDS	1458062	1458811	.	-	0	ID=cds1268;Name=YP_170352.1;Parent=gene1441;Note=Similar to Q980U3 Uroporphyrinogen III synthase%2C  from Sulfolobus solfataricus %28237 aa%29. FASTA: opt: 171 Z-score: 213.0 E%28%29: 0.00052 Smith-Waterman score: 171%3B 34.746 identity in 118 aa overlap;Dbxref=GOA:Q5NF40,InterPro:IPR003754,UniProtKB%2FTrEMBL:Q5NF40,Genbank:YP_170352.1,GeneID:3192417;gbkey=CDS;product=uroporphyrinogen III synthase;protein_id=YP_170352.1;transl_table=11
NC_006570.2	RefSeq	gene	1458812	1459228	.	-	.	ID=gene1442;Name=FTT_1409c;Dbxref=GeneID:3192474;gbkey=Gene;locus_tag=FTT_1409c
NC_006570.2	RefSeq	CDS	1458812	1459228	.	-	0	ID=cds1269;Name=YP_170353.1;Parent=gene1442;Note=Similar to Q8PK22 Hypothetical protein from Xanthomonas axonopodis %28145 aa%29. FASTA: opt: 415 Z-score: 523.5 E%28%29: 2.6e-21 Smith-Waterman score: 415%3B 45.652 identity in 138 aa overlap ORF ftt1409c;Dbxref=InterPro:IPR003808,UniProtKB%2FTrEMBL:Q5NF39,Genbank:YP_170353.1,GeneID:3192474;gbkey=CDS;product=hypothetical protein;protein_id=YP_170353.1;transl_table=11
NC_006570.2	RefSeq	gene	1459457	1459529	.	+	.	ID=gene1443;Name=tRNA-Asn %28GTT%29;Dbxref=GeneID:8303701;description=tRNA-Asn %28GTT%29;gbkey=Gene;gene=tRNA-Asn %28GTT%29;locus_tag=FTT_t28
NC_006570.2	RefSeq	tRNA	1459457	1459529	.	+	.	ID=rna34;Dbxref=GeneID:8303701;codons=41;gbkey=tRNA;product=tRNA-Asn
NC_006570.2	RefSeq	exon	1459457	1459529	.	+	.	ID=id219;Parent=rna34;Dbxref=GeneID:8303701;codons=41;gbkey=tRNA;product=tRNA-Asn
NC_006570.2	RefSeq	gene	1459926	1460471	.	+	.	ID=gene1444;Name=FTT_1410;Dbxref=GeneID:3192484;gbkey=Gene;locus_tag=FTT_1410
NC_006570.2	RefSeq	CDS	1459926	1460471	.	+	0	ID=cds1270;Name=YP_170354.1;Parent=gene1444;Note=Similar to Q8XTB4 Probable transmembrane protein from Ralstonia solanacearum %28184 aa%29. FASTA: opt: 443 Z-score: 558.2 E%28%29: 3e-23 Smith-Waterman score: 443%3B 42.045 identity in 176 aa overlap ORF ftt1410;Dbxref=GOA:Q5NF38,InterPro:IPR003752,UniProtKB%2FTrEMBL:Q5NF38,Genbank:YP_170354.1,GeneID:3192484;gbkey=CDS;product=hypothetical protein;protein_id=YP_170354.1;transl_table=11
NC_006570.2	RefSeq	repeat_region	1461640	1461651	.	+	.	ID=id220;Note=12bp ISFtu5 terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	gene	1461697	1462672	.	+	.	ID=gene1445;Name=FTT_1411;Dbxref=GeneID:3190825;gbkey=Gene;locus_tag=FTT_1411;pseudo=true
NC_006570.2	RefSeq	repeat_region	1462785	1462796	.	+	.	ID=id221;Note=12bp ISFtu5 terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	gene	1463060	1464757	.	+	.	ID=gene1446;Name=proS;Dbxref=GeneID:3191231;gbkey=Gene;gene=proS;locus_tag=FTT_1412
NC_006570.2	RefSeq	CDS	1463060	1464757	.	+	0	ID=cds1271;Name=YP_170355.1;Parent=gene1446;Note=catalyzes the formation of prolyl-tRNA%28Pro%29 from proline and tRNA%28Pro%29;Dbxref=GOA:Q5NF37,InterPro:IPR007214,UniProtKB%2FSwiss-Prot:Q5NF37,Genbank:YP_170355.1,GeneID:3191231;gbkey=CDS;product=prolyl-tRNA synthetase;protein_id=YP_170355.1;transl_table=11
NC_006570.2	RefSeq	gene	1464903	1466033	.	+	.	ID=gene1447;Name=FTT_1413;Dbxref=GeneID:3192494;gbkey=Gene;locus_tag=FTT_1413
NC_006570.2	RefSeq	CDS	1464903	1466033	.	+	0	ID=cds1272;Name=YP_170356.1;Parent=gene1447;Note=Similar to Q886Y5 Aminotransferase%2C classes I and II from Pseudomonas syringae %28382 aa%29. FASTA: opt: 929 Z-score: 1036.9 E%28%29: 6.6e-50 Smith-Waterman score: 929%3B 37.076 identity in 383 aa overlap ORF ftt1413;Dbxref=GOA:Q5NF36,InterPro:IPR015421,UniProtKB%2FTrEMBL:Q5NF36,Genbank:YP_170356.1,GeneID:3192494;gbkey=CDS;product=aminotransferase;protein_id=YP_170356.1;transl_table=11
NC_006570.2	RefSeq	gene	1466033	1466515	.	+	.	ID=gene1448;Name=FTT_1414;Dbxref=GeneID:3190816;gbkey=Gene;locus_tag=FTT_1414
NC_006570.2	RefSeq	CDS	1466033	1466515	.	+	0	ID=cds1273;Name=YP_170357.1;Parent=gene1448;Note=ORF ftt1414;Dbxref=UniProtKB%2FTrEMBL:Q5NF35,Genbank:YP_170357.1,GeneID:3190816;gbkey=CDS;product=hypothetical protein;protein_id=YP_170357.1;transl_table=11
NC_006570.2	RefSeq	gene	1466623	1467525	.	+	.	ID=gene1449;Name=FTT_1415;Dbxref=GeneID:3192313;gbkey=Gene;locus_tag=FTT_1415
NC_006570.2	RefSeq	CDS	1466623	1467525	.	+	0	ID=cds1274;Name=YP_170358.1;Parent=gene1449;Note=ORF ftt1415;Dbxref=UniProtKB%2FTrEMBL:Q5NF34,Genbank:YP_170358.1,GeneID:3192313;gbkey=CDS;product=hypothetical protein;protein_id=YP_170358.1;transl_table=11
NC_006570.2	RefSeq	gene	1467577	1467990	.	-	.	ID=gene1450;Name=FTT_1416c;Dbxref=GeneID:3191965;gbkey=Gene;locus_tag=FTT_1416c
NC_006570.2	RefSeq	CDS	1467577	1467990	.	-	0	ID=cds1275;Name=YP_170359.1;Parent=gene1450;Note=ORF ftt1416c;Dbxref=UniProtKB%2FTrEMBL:Q5NF33,Genbank:YP_170359.1,GeneID:3191965;gbkey=CDS;product=lipoprotein;protein_id=YP_170359.1;transl_table=11
NC_006570.2	RefSeq	gene	1468144	1468929	.	+	.	ID=gene1451;Name=FTT_1417;Dbxref=GeneID:3192491;gbkey=Gene;locus_tag=FTT_1417
NC_006570.2	RefSeq	CDS	1468144	1468929	.	+	0	ID=cds1276;Name=YP_170360.1;Parent=gene1451;Note=Similar to Q8ZRJ8  amidohydrolase from Salmonella typhimurium %28255 aa%29. FASTA: opt: 723 Z-score: 882.8 E%28%29: 2.6e-41 Smith-Waterman score: 723%3B 43.359 identity in 256 aa overlap ORF ftt1417;Dbxref=GOA:Q5NF32,InterPro:IPR003010,UniProtKB%2FTrEMBL:Q5NF32,Genbank:YP_170360.1,GeneID:3192491;gbkey=CDS;product=carbon-nitrogen hydrolase;protein_id=YP_170360.1;transl_table=11
NC_006570.2	RefSeq	gene	1468913	1469338	.	-	.	ID=gene1452;Name=nusB;Dbxref=GeneID:3191038;gbkey=Gene;gene=nusB;locus_tag=FTT_1418c
NC_006570.2	RefSeq	CDS	1468913	1469338	.	-	0	ID=cds1277;Name=YP_170361.1;Parent=gene1452;Note=Similar to Q889Q5 N utilization substance protein B from Pseudomonas syringae %28165 aa%29. FASTA: opt: 274 Z-score: 347.8 E%28%29: 1.6e-11 Smith-Waterman score: 274%3B 32.847 identity in 137 aa overlap;Dbxref=GOA:Q5NF31,InterPro:IPR011605,UniProtKB%2FTrEMBL:Q5NF31,Genbank:YP_170361.1,GeneID:3191038;gbkey=CDS;product=N utilization substance protein B;protein_id=YP_170361.1;transl_table=11
NC_006570.2	RefSeq	gene	1469525	1469851	.	+	.	ID=gene1453;Name=FTT_1419;Dbxref=GeneID:3190828;gbkey=Gene;locus_tag=FTT_1419
NC_006570.2	RefSeq	CDS	1469525	1469851	.	+	0	ID=cds1278;Name=YP_170362.1;Parent=gene1453;Note=ORF ftt1419;Dbxref=UniProtKB%2FTrEMBL:Q5NF30,Genbank:YP_170362.1,GeneID:3190828;gbkey=CDS;product=lipoprotein;protein_id=YP_170362.1;transl_table=11
NC_006570.2	RefSeq	gene	1469984	1470451	.	+	.	ID=gene1454;Name=FTT_1420;Dbxref=GeneID:3190820;gbkey=Gene;locus_tag=FTT_1420
NC_006570.2	RefSeq	CDS	1469984	1470451	.	+	0	ID=cds1279;Name=YP_170363.1;Parent=gene1454;Note=ORF ftt1420;Dbxref=UniProtKB%2FTrEMBL:Q5NF29,Genbank:YP_170363.1,GeneID:3190820;gbkey=CDS;product=hypothetical protein;protein_id=YP_170363.1;transl_table=11
NC_006570.2	RefSeq	gene	1470670	1471119	.	+	.	ID=gene1455;Name=FTT_1421;Dbxref=GeneID:3190847;gbkey=Gene;locus_tag=FTT_1421
NC_006570.2	RefSeq	CDS	1470670	1471119	.	+	0	ID=cds1280;Name=YP_170364.1;Parent=gene1455;Note=Similar to Q88E79 Conserved hypothetical protein from Pseudomonas putida %28150 aa%29. FASTA: opt: 511 Z-score: 638.2 E%28%29: 1.1e-27 Smith-Waterman score: 511%3B 46.809 identity in 141 aa overlap ORF ftt1421;Dbxref=InterPro:IPR008228,UniProtKB%2FTrEMBL:Q5NF28,Genbank:YP_170364.1,GeneID:3190847;gbkey=CDS;product=hypothetical protein;protein_id=YP_170364.1;transl_table=11
NC_006570.2	RefSeq	gene	1471159	1471779	.	+	.	ID=gene1456;Name=FTT_1422;Dbxref=GeneID:3191857;gbkey=Gene;locus_tag=FTT_1422
NC_006570.2	RefSeq	CDS	1471159	1471779	.	+	0	ID=cds1281;Name=YP_170365.1;Parent=gene1456;Note=Similar to Q87UK0 Oxidoreductase%2C 2OG-Fe%28II%29 oxygenase family %28244 aa%29. FASTA: opt: 400 Z-score: 493.2 E%28%29: 1.3e-19 33.163 identity in 196 aa overlap ORF ftt1422;Dbxref=GOA:Q5NF27,InterPro:IPR006620,UniProtKB%2FTrEMBL:Q5NF27,Genbank:YP_170365.1,GeneID:3191857;gbkey=CDS;product=oxidoreductase;protein_id=YP_170365.1;transl_table=11
NC_006570.2	RefSeq	gene	1471772	1472521	.	-	.	ID=gene1457;Name=FTT_1423c;Dbxref=GeneID:3192297;gbkey=Gene;locus_tag=FTT_1423c
NC_006570.2	RefSeq	CDS	1471772	1472521	.	-	0	ID=cds1282;Name=YP_170366.1;Parent=gene1457;Note=Similar to Q8NQW1 Predicted permease from Corynebacterium glutamicum %28250 aa%29. FASTA: opt: 472 Z-score: 553.4 E%28%29: 5.6e-23 Smith-Waterman score: 472%3B 35.573 identity in 253 aa overlap. ORF ftt1423c;Dbxref=GOA:Q5NF26,InterPro:IPR002781,UniProtKB%2FTrEMBL:Q5NF26,Genbank:YP_170366.1,GeneID:3192297;gbkey=CDS;product=hypothetical protein;protein_id=YP_170366.1;transl_table=11
NC_006570.2	RefSeq	gene	1472523	1473203	.	-	.	ID=gene1458;Name=FTT_1424c;Dbxref=GeneID:3192493;gbkey=Gene;locus_tag=FTT_1424c
NC_006570.2	RefSeq	CDS	1472523	1473203	.	-	0	ID=cds1283;Name=YP_170367.1;Parent=gene1458;Note=Similar to Q89VN8 Bll1007 protein from Bradyrhizobium japonicum %28345 aa%29. FASTA: opt: 834 Z-score: 1018.3 E%28%29: 7.2e-49 Smith-Waterman score: 834%3B 53.509 identity in 228 aa overlap ORF ftt1424c;Dbxref=GOA:Q5NF25,InterPro:IPR001279,UniProtKB%2FTrEMBL:Q5NF25,Genbank:YP_170367.1,GeneID:3192493;gbkey=CDS;product=hypothetical protein;protein_id=YP_170367.1;transl_table=11
NC_006570.2	RefSeq	gene	1473248	1474942	.	-	.	ID=gene1459;Name=naoX;Dbxref=GeneID:3192453;gbkey=Gene;gene=naoX;locus_tag=FTT_1425c
NC_006570.2	RefSeq	CDS	1473248	1474942	.	-	0	ID=cds1284;Name=YP_170368.1;Parent=gene1459;Note=Similar to Q8XMF5 NADH oxidase from Clostridium perfringens %28566 aa%29. FASTA: opt: 2055 Z-score: 2177.9 E%28%29: 1.8e-113 57.117 identity in 548 aa overlap;Dbxref=GOA:Q5NF24,InterPro:IPR013027,UniProtKB%2FTrEMBL:Q5NF24,Genbank:YP_170368.1,GeneID:3192453;gbkey=CDS;product=NADH oxidase;protein_id=YP_170368.1;transl_table=11
NC_006570.2	RefSeq	gene	1474964	1475482	.	-	.	ID=gene1460;Name=FTT_1426c;Dbxref=GeneID:3190849;gbkey=Gene;locus_tag=FTT_1426c
NC_006570.2	RefSeq	CDS	1474964	1475482	.	-	0	ID=cds1285;Name=YP_170369.1;Parent=gene1460;Note=Similar to Q8YQC8 Hypothetical protein from Anabaena sp. %28177 aa%29. FASTA: opt: 465 Z-score: 572.2 E%28%29: 5e-24 Smith-Waterman score: 465%3B 43.023 identity in 172 aa overlap ORF ftt1426c;Dbxref=InterPro:IPR001763,UniProtKB%2FTrEMBL:Q5NF23,Genbank:YP_170369.1,GeneID:3190849;gbkey=CDS;product=hypothetical protein;protein_id=YP_170369.1;transl_table=11
NC_006570.2	RefSeq	repeat_region	1475958	1475969	.	+	.	ID=id222;Note=ISFtu1 12bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	1475970	1475985	.	+	.	ID=id223;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	1475986	1476001	.	+	.	ID=id224;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;gbkey=repeat_region
NC_006570.2	RefSeq	gene	1476022	1476806	.	+	.	ID=gene1461;Name=isftu1;Dbxref=GeneID:3190918;gbkey=Gene;gene=isftu1;locus_tag=FTT_1427
NC_006570.2	RefSeq	CDS	1476022	1476348	.	+	0	ID=cds1286;Name=YP_170370.1;Parent=gene1461;Note=ISFtu1. Transposase%2C member of the IS630 Tc-1 mariner family. Identical to Q93EJ6  transposase from Francisella tularensis %28118 aa%29 from aa 144-261. Identical to Q93EJ7  transposase from Francisella tularensis %28126 aa%29 from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF%27s. ORF1 %28identical to Q93EJ7%29 contains a programmed ribosomal frameshifting motif%2C 5%27-AAAAAAAG-3%27 at aa position 109 which permits frameshifting to ORF2 %28identical to Q93EJ6%29 to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family%2C and also mariner elements%2C show that this transposase shares strongly conserved residues%2C including a fully conserved dipeptide%2CAsp-Glu %28DE%29%2C and a block consisting of a fully conserved Asp and highly conserved Glu%2C separated by 34 or 35 residues %28D35E%29. The conserved dipeptide is only present if ribosomal frameshifting occurs.;Dbxref=UniProtKB%2FTrEMBL:Q5NIH2,Genbank:YP_170370.1,GeneID:3190918;gbkey=CDS;product=transposase;protein_id=YP_170370.1;transl_table=11
NC_006570.2	RefSeq	CDS	1476348	1476806	.	+	0	ID=cds1286;Name=YP_170370.1;Parent=gene1461;Note=ISFtu1. Transposase%2C member of the IS630 Tc-1 mariner family. Identical to Q93EJ6  transposase from Francisella tularensis %28118 aa%29 from aa 144-261. Identical to Q93EJ7  transposase from Francisella tularensis %28126 aa%29 from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF%27s. ORF1 %28identical to Q93EJ7%29 contains a programmed ribosomal frameshifting motif%2C 5%27-AAAAAAAG-3%27 at aa position 109 which permits frameshifting to ORF2 %28identical to Q93EJ6%29 to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family%2C and also mariner elements%2C show that this transposase shares strongly conserved residues%2C including a fully conserved dipeptide%2CAsp-Glu %28DE%29%2C and a block consisting of a fully conserved Asp and highly conserved Glu%2C separated by 34 or 35 residues %28D35E%29. The conserved dipeptide is only present if ribosomal frameshifting occurs.;Dbxref=UniProtKB%2FTrEMBL:Q5NIH2,Genbank:YP_170370.1,GeneID:3190918;gbkey=CDS;product=transposase;protein_id=YP_170370.1;transl_table=11
NC_006570.2	RefSeq	repeat_region	1476894	1476905	.	+	.	ID=id225;Note=ISFtu1 12bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	gene	1476967	1477482	.	-	.	ID=gene1462;Name=FTT_1428c;Dbxref=GeneID:3192325;gbkey=Gene;locus_tag=FTT_1428c
NC_006570.2	RefSeq	CDS	1476967	1477482	.	-	0	ID=cds1287;Name=YP_170371.1;Parent=gene1462;Note=Similar to AAP10414 %28Q81AS7%29 Acetyltransferase from Bacillus cereus %28174 aa%29. FASTA: opt: 372 Z-score: 461.6 E%28%29: 7.3e-18 Smith-Waterman score: 372%3B 40.341 identity in 176 aa overlap ORF ftt1428c;Dbxref=GOA:Q5NF21,InterPro:IPR016181,UniProtKB%2FTrEMBL:Q5NF21,Genbank:YP_170371.1,GeneID:3192325;gbkey=CDS;product=acetyltransferase;protein_id=YP_170371.1;transl_table=11
NC_006570.2	RefSeq	gene	1477490	1478091	.	-	.	ID=gene1463;Name=FTT_1429c;Dbxref=GeneID:3190859;gbkey=Gene;locus_tag=FTT_1429c;pseudo=true
NC_006570.2	RefSeq	gene	1478134	1478592	.	-	.	ID=gene1464;Name=FTT_1430c;Dbxref=GeneID:8303702;gbkey=Gene;locus_tag=FTT_1430c;pseudo=true
NC_006570.2	RefSeq	gene	1478662	1479297	.	+	.	ID=gene1465;Name=rhtC;Dbxref=GeneID:3191627;gbkey=Gene;gene=rhtC;locus_tag=FTT_1431
NC_006570.2	RefSeq	CDS	1478662	1479297	.	+	0	ID=cds1288;Name=YP_170372.1;Parent=gene1465;Note=Similar Q8DDM9 to  threonine efflux protein from Vibrio vulnificus %28223 aa%29. FASTA: opt: 310 Z-score: 386.3 E%28%29: 1.1e-13 Smith-Waterman score: 310%3B 29.577 identity in 213 aa overlap;Dbxref=GOA:Q5NF20,InterPro:IPR001123,UniProtKB%2FTrEMBL:Q5NF20,Genbank:YP_170372.1,GeneID:3191627;gbkey=CDS;product=threonine efflux protein;protein_id=YP_170372.1;transl_table=11
NC_006570.2	RefSeq	gene	1479294	1480184	.	-	.	ID=gene1466;Name=ppnK;Dbxref=GeneID:3191987;gbkey=Gene;gene=ppnK;locus_tag=FTT_1432c
NC_006570.2	RefSeq	CDS	1479294	1480184	.	-	0	ID=cds1289;Name=YP_170373.1;Parent=gene1466;Note=Similar to Q89AR9  inorganic polyphosphate%2FATP-NAD kinase from Buchnera aphidicola %28292 aa%29. FASTA: opt: 682 Z-score: 800.3 E%28%29: 1e-36 Smith-Waterman score: 682%3B 38.776 identity in 294 aa overlap;Dbxref=GOA:Q5NF19,InterPro:IPR017437,UniProtKB%2FSwiss-Prot:Q5NF19,Genbank:YP_170373.1,GeneID:3191987;gbkey=CDS;product=inorganic phosphate%2FATP-NAD kinase;protein_id=YP_170373.1;transl_table=11
NC_006570.2	RefSeq	gene	1480373	1481317	.	+	.	ID=gene1467;Name=gtrB;Dbxref=GeneID:3191777;gbkey=Gene;gene=gtrB;locus_tag=FTT_1433
NC_006570.2	RefSeq	CDS	1480373	1481317	.	+	0	ID=cds1290;Name=YP_170374.1;Parent=gene1467;Note=Similar to Q55487  glycosyl transferase from Synechocystis sp. %28318 aa%29. FASTA: opt: 1079 Z-score: 1283.0 E%28%29: 1.3e-63 Smith-Waterman score: 1079%3B 50.000 identity in 298 aa overlap;Dbxref=GOA:Q5NF18,InterPro:IPR001173,UniProtKB%2FTrEMBL:Q5NF18,Genbank:YP_170374.1,GeneID:3191777;gbkey=CDS;product=glycosyl transferase family protein;protein_id=YP_170374.1;transl_table=11
NC_006570.2	RefSeq	gene	1481321	1482100	.	-	.	ID=gene1468;Name=yadH;Dbxref=GeneID:3192122;gbkey=Gene;gene=yadH;locus_tag=FTT_1434c
NC_006570.2	RefSeq	CDS	1481321	1482100	.	-	0	ID=cds1291;Name=YP_170375.1;Parent=gene1468;Note=Similar Q88LN3 ABC transporter%2Cpermease protein from Pseudomonas putida %28259 aa%29. FASTA: opt: 890 Z-score: 979.2 E%28%29: 1.1e-46 Smith-Waterman score: 890%3B 50.193 identity in 259 aa overlap;Dbxref=GOA:Q5NF17,InterPro:IPR013525,UniProtKB%2FTrEMBL:Q5NF17,Genbank:YP_170375.1,GeneID:3192122;gbkey=CDS;product=ABC transporter membrane protein;protein_id=YP_170375.1;transl_table=11
NC_006570.2	RefSeq	gene	1482109	1483032	.	-	.	ID=gene1469;Name=yagD;Dbxref=GeneID:3192125;gbkey=Gene;gene=yagD;locus_tag=FTT_1435c
NC_006570.2	RefSeq	CDS	1482109	1483032	.	-	0	ID=cds1292;Name=YP_170376.1;Parent=gene1469;Note=Similar to Q9CNG2 YagD from Pasteurella multocida %28312 aa%29. FASTA: opt: 1028 Z-score: 1082.3 E%28%29: 2e-52 Smith-Waterman score: 1028%3B 50.662 identity in 302 aa overlap;Dbxref=GOA:Q5NF16,InterPro:IPR017871,UniProtKB%2FTrEMBL:Q5NF16,Genbank:YP_170376.1,GeneID:3192125;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=YP_170376.1;transl_table=11
NC_006570.2	RefSeq	repeat_region	1483120	1483138	.	+	.	ID=id226;Note=ISFtu2 19bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	gene	1483215	1483958	.	+	.	ID=gene1470;Name=isftu2;Dbxref=GeneID:3190848;gbkey=Gene;gene=isftu2;locus_tag=FTT_1436
NC_006570.2	RefSeq	CDS	1483215	1483958	.	+	0	ID=cds1293;Name=YP_170377.1;Parent=gene1470;Note=ISFtu2. Transposase%2C member of the IS5 family. Identical to Q8GM03  transposase from Francisella tularensis %28247 aa%29.;Dbxref=GOA:Q8GM03,InterPro:IPR002559,UniProtKB%2FTrEMBL:Q8GM03,Genbank:YP_170377.1,GeneID:3190848;gbkey=CDS;product=transposase;protein_id=YP_170377.1;transl_table=11
NC_006570.2	RefSeq	repeat_region	1483966	1483984	.	+	.	ID=id227;Note=ISFtu2 19bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	gene	1484011	1484788	.	-	.	ID=gene1471;Name=FTT_1437c;Dbxref=GeneID:3192298;gbkey=Gene;locus_tag=FTT_1437c;pseudo=true
NC_006570.2	RefSeq	gene	1484788	1485111	.	-	.	ID=gene1472;Name=FTT_1438c;Dbxref=GeneID:8303703;gbkey=Gene;locus_tag=FTT_1438c;pseudo=true
NC_006570.2	RefSeq	gene	1485237	1486004	.	-	.	ID=gene1473;Name=FTT_1439c;Dbxref=GeneID:3190817;gbkey=Gene;locus_tag=FTT_1439c
NC_006570.2	RefSeq	CDS	1485237	1486004	.	-	0	ID=cds1294;Name=YP_170378.1;Parent=gene1473;Note=Similar to Q87N28  deoxyribonuclease from vibrio parahaemolyticus %28255 aa%29. FASTA: opt: 787 Z-score: 917.1 E%28%29: 3.1e-43 Smith-Waterman score: 787%3B 44.314 identity in 255 aa overlap ORF ftt1439c;Dbxref=GOA:Q5NF14,InterPro:IPR018228,UniProtKB%2FTrEMBL:Q5NF14,Genbank:YP_170378.1,GeneID:3190817;gbkey=CDS;product=deoxyribonuclease;protein_id=YP_170378.1;transl_table=11
NC_006570.2	RefSeq	gene	1486090	1487470	.	-	.	ID=gene1474;Name=FTT_1440c;Dbxref=GeneID:3192323;gbkey=Gene;locus_tag=FTT_1440c;pseudo=true
NC_006570.2	RefSeq	gene	1487670	1488155	.	+	.	ID=gene1475;Name=FTT_1441;Dbxref=GeneID:3190796;gbkey=Gene;locus_tag=FTT_1441
NC_006570.2	RefSeq	CDS	1487670	1488155	.	+	0	ID=cds1295;Name=YP_170379.1;Parent=gene1475;Note=Similar to Q8YQ94 Hypothetical protein from Anabaena sp. %28144 aa%29. FASTA: opt: 497 Z-score: 629.3 E%28%29: 3.4e-27 Smith-Waterman score: 497%3B 54.610 identity in 141 aa overlap ORF ftt1441;Dbxref=GOA:Q5NF13,InterPro:IPR012347,UniProtKB%2FTrEMBL:Q5NF13,Genbank:YP_170379.1,GeneID:3190796;gbkey=CDS;product=hypothetical protein;protein_id=YP_170379.1;transl_table=11
NC_006570.2	RefSeq	gene	1488679	1488765	.	-	.	ID=gene1476;Name=tRNA-Leu %28CAA%29;Dbxref=GeneID:8303704;description=tRNA-Leu %28CAA%29;gbkey=Gene;gene=tRNA-Leu %28CAA%29;locus_tag=FTT_t29
NC_006570.2	RefSeq	tRNA	1488679	1488765	.	-	.	ID=rna35;Dbxref=GeneID:8303704;codons=3;gbkey=tRNA;product=tRNA-Leu
NC_006570.2	RefSeq	exon	1488679	1488765	.	-	.	ID=id228;Parent=rna35;Dbxref=GeneID:8303704;codons=3;gbkey=tRNA;product=tRNA-Leu
NC_006570.2	RefSeq	gene	1488773	1489729	.	-	.	ID=gene1477;Name=rpoA2;Dbxref=GeneID:3191983;gbkey=Gene;gene=rpoA2;locus_tag=FTT_1442c
NC_006570.2	RefSeq	CDS	1488773	1489729	.	-	0	ID=cds1296;Name=YP_170380.1;Parent=gene1477;Note=catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme;Dbxref=GOA:Q5NF12,InterPro:IPR011773,UniProtKB%2FSwiss-Prot:Q5NF12,Genbank:YP_170380.1,GeneID:3191983;gbkey=CDS;product=DNA-directed RNA polymerase subunit alpha;protein_id=YP_170380.1;transl_table=11
NC_006570.2	RefSeq	gene	1489817	1490719	.	-	.	ID=gene1478;Name=FTT_1443c;Dbxref=GeneID:3192473;gbkey=Gene;locus_tag=FTT_1443c
NC_006570.2	RefSeq	CDS	1489817	1490719	.	-	0	ID=cds1297;Name=YP_170381.1;Parent=gene1478;Note=Similar to Q87ZS7 ATPase%2C AAA family from Pseudomonas syringae %28440 aa%29. FASTA: opt: 1018 Z-score: 1104.6 E%28%29: 1.1e-53 Smith-Waterman score: 1096%3B 43.243 identity in 407 aa overlap ORF ftt1443c;Dbxref=UniProtKB%2FTrEMBL:Q5NF11,Genbank:YP_170381.1,GeneID:3192473;gbkey=CDS;product=recombination factor protein RarA;protein_id=YP_170381.1;transl_table=11
NC_006570.2	RefSeq	gene	1491287	1492222	.	-	.	ID=gene1479;Name=ppx;Dbxref=GeneID:3191242;gbkey=Gene;gene=ppx;locus_tag=FTT_1444c
NC_006570.2	RefSeq	CDS	1491287	1492222	.	-	0	ID=cds1298;Name=YP_170382.1;Parent=gene1479;Note=Similar to P44828  exopolyphosphatase from Pneumophilus influenzae %28323 aa%29. FASTA: opt: 730 Z-score: 856.9 E%28%29: 7.1e-40 Smith-Waterman score: 730%3B 41.275 identity in 298 aa overlap;Dbxref=GOA:Q5NF10,InterPro:IPR003695,UniProtKB%2FTrEMBL:Q5NF10,Genbank:YP_170382.1,GeneID:3191242;gbkey=CDS;product=exopolyphosphatase;protein_id=YP_170382.1;transl_table=11
NC_006570.2	RefSeq	gene	1492411	1492734	.	+	.	ID=gene1480;Name=trxA1;Dbxref=GeneID:3190999;gbkey=Gene;gene=trxA1;locus_tag=FTT_1445
NC_006570.2	RefSeq	CDS	1492411	1492734	.	+	0	ID=cds1299;Name=YP_170383.1;Parent=gene1480;Note=Similar to Q9JYY9 Thioredoxin from Neisseria meningitidis %28110 aa%29. FASTA: opt: 452 Z-score: 595.9 E%28%29: 2.4e-25 Smith-Waterman score: 452%3B 62.000 identity in 100 aa overlap;Dbxref=GOA:Q5NF09,InterPro:IPR017937,UniProtKB%2FTrEMBL:Q5NF09,Genbank:YP_170383.1,GeneID:3190999;gbkey=CDS;product=thioredoxin;protein_id=YP_170383.1;transl_table=11
NC_006570.2	RefSeq	gene	1492777	1494039	.	+	.	ID=gene1481;Name=rho;Dbxref=GeneID:3191628;gbkey=Gene;gene=rho;locus_tag=FTT_1446
NC_006570.2	RefSeq	CDS	1492777	1494039	.	+	0	ID=cds1300;Name=YP_170384.1;Parent=gene1481;Note=An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes;Dbxref=GOA:Q5NF08,InterPro:IPR011129,UniProtKB%2FTrEMBL:Q5NF08,Genbank:YP_170384.1,GeneID:3191628;gbkey=CDS;product=transcription termination factor Rho;protein_id=YP_170384.1;transl_table=11
NC_006570.2	RefSeq	gene	1495151	1496635	.	-	.	ID=gene1482;Name=manB;Dbxref=GeneID:3192273;gbkey=Gene;gene=manB;locus_tag=FTT_1447c
NC_006570.2	RefSeq	CDS	1495151	1496635	.	-	0	ID=cds1301;Name=YP_170385.1;Parent=gene1482;Note=Similar to Q8UCV4 Phosphomannomutase from Agrobacterium tumefaciens %28506 aa%29. FASTA: opt: 1226 Z-score: 1345.0 E%28%29: 4.6e-67 Smith-Waterman score: 1226%3B 41.127 identity in 479 aa overlap;Dbxref=GOA:Q79RC1,InterPro:IPR016066,UniProtKB%2FTrEMBL:Q79RC1,Genbank:YP_170385.1,GeneID:3192273;gbkey=CDS;product=phosphomannomutase;protein_id=YP_170385.1;transl_table=11
NC_006570.2	RefSeq	gene	1496666	1498072	.	-	.	ID=gene1483;Name=manC;Dbxref=GeneID:3191524;gbkey=Gene;gene=manC;locus_tag=FTT_1448c
NC_006570.2	RefSeq	CDS	1496666	1498072	.	-	0	ID=cds1302;Name=YP_170386.1;Parent=gene1483;Note=Similar to Q9ETR3 GDP-mannose pyrophosphorylase from Salmonella enterica %28464 aa%29. FASTA: opt: 1571 Z-score: 1720.2 E%28%29: 5.8e-88 Smith-Waterman score: 1571%3B 50.647 identity in 464 aa overlap;Dbxref=GOA:Q79RC2,InterPro:IPR014710,UniProtKB%2FTrEMBL:Q79RC2,Genbank:YP_170386.1,GeneID:3191524;gbkey=CDS;product=mannose-1-phosphate guanylyltransferase;protein_id=YP_170386.1;transl_table=11
NC_006570.2	RefSeq	repeat_region	1498322	1498333	.	-	.	ID=id229;Note=ISFtu1 12bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	gene	1498410	1498894	.	-	.	ID=gene1484;Name=isftu1;Dbxref=GeneID:8303696;gbkey=Gene;gene=isftu1;locus_tag=FTT_1449c;pseudo=true
NC_006570.2	RefSeq	repeat_region	1498915	1498930	.	-	.	ID=id230;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	1498931	1498946	.	-	.	ID=id231;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	1498947	1498958	.	-	.	ID=id232;Note=ISFtu1 12bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	gene	1499039	1500085	.	-	.	ID=gene1485;Name=wbtM;Dbxref=GeneID:3192100;gbkey=Gene;gene=wbtM;locus_tag=FTT_1450c
NC_006570.2	RefSeq	CDS	1499039	1500085	.	-	0	ID=cds1303;Name=YP_170387.1;Parent=gene1485;Note=Similar to Q9RDY1 RmlB protein from Legionella pneumophila %28351 aa%29. FASTA: opt: 1490 Z-score: 1729.8 E%28%29: 1.7e-88 Smith-Waterman score: 1490%3B 64.392 identity in 337 aa overlap;Dbxref=GOA:Q79RC4,HSSP:1KEW,InterPro:IPR016040,UniProtKB%2FTrEMBL:Q79RC4,Genbank:YP_170387.1,GeneID:3192100;gbkey=CDS;product=dTDP-D-glucose 4%2C6-dehydratase;protein_id=YP_170387.1;transl_table=11
NC_006570.2	RefSeq	gene	1500602	1501486	.	-	.	ID=gene1486;Name=wbtL;Dbxref=GeneID:3192089;gbkey=Gene;gene=wbtL;locus_tag=FTT_1451c
NC_006570.2	RefSeq	CDS	1500602	1501486	.	-	0	ID=cds1304;Name=YP_170388.1;Parent=gene1486;Note=Similar to O66250 Glucose-1-phosphate-thymidylyltransferase from Actinobacillus actinomycetemcomitans %28290 aa%29. FASTA: opt: 1336 Z-score: 1567.4 E%28%29: 1.9e-79 Smith-Waterman score: 1336%3B 67.466 identity in 292 aa overlap;Dbxref=GOA:Q79RC5,InterPro:IPR005907,UniProtKB%2FTrEMBL:Q79RC5,Genbank:YP_170388.1,GeneID:3192089;gbkey=CDS;product=glucose-1-phosphate thymidylyltransferase;protein_id=YP_170388.1;transl_table=11
NC_006570.2	RefSeq	gene	1501511	1502371	.	-	.	ID=gene1487;Name=wbtK;Dbxref=GeneID:3192091;gbkey=Gene;gene=wbtK;locus_tag=FTT_1452c
NC_006570.2	RefSeq	CDS	1501511	1502371	.	-	0	ID=cds1305;Name=YP_170389.1;Parent=gene1487;Note=Similar to Q8ECG2 Glycosyl transferase%2C group 2 family protein from Shewanella oneidensis %28298 aa%29. FASTA: opt: 724 Z-score: 845.9 E%28%29: 2.9e-39 Smith-Waterman score: 724%3B 39.789 identity in 284 aa overlap;Dbxref=GOA:Q79RC6,InterPro:IPR001173,UniProtKB%2FTrEMBL:Q79RC6,Genbank:YP_170389.1,GeneID:3192091;gbkey=CDS;product=glycosyltransferase;protein_id=YP_170389.1;transl_table=11
NC_006570.2	RefSeq	gene	1502364	1503851	.	-	.	ID=gene1488;Name=wzx;Dbxref=GeneID:3192113;gbkey=Gene;gene=wzx;locus_tag=FTT_1453c
NC_006570.2	RefSeq	CDS	1502364	1503851	.	-	0	ID=cds1306;Name=YP_170390.1;Parent=gene1488;Note=Similar to AAO39697%28Q84DG4%29 O antigen flippase from E. coli %28464 aa%29. FASTA: opt: 861 Z-score: 954.5 E%28%29: 2.6e-45 Smith-Waterman score: 861%3B 31.343identity in 469 aa overlap;Dbxref=GOA:Q79RC7,InterPro:IPR002797,UniProtKB%2FTrEMBL:Q79RC7,Genbank:YP_170390.1,GeneID:3192113;gbkey=CDS;product=O-antigen flippase;protein_id=YP_170390.1;transl_table=11
NC_006570.2	RefSeq	gene	1503856	1504581	.	-	.	ID=gene1489;Name=wbtJ;Dbxref=GeneID:3192088;gbkey=Gene;gene=wbtJ;locus_tag=FTT_1454c
NC_006570.2	RefSeq	CDS	1503856	1504581	.	-	0	ID=cds1307;Name=YP_170391.1;Parent=gene1489;Note=Similar to Q50721 Hypothetical protein Rv3404c precurser from Mycobacterium tuberculosis %28234 aa%29. FASTA: opt: 562 Z-score: 656.5 E%28%29: 1e-28 Smith-Waterman score: 562%3B 43.243 identity in 185 aa overlap;Dbxref=GOA:Q5NF01,InterPro:IPR015518,UniProtKB%2FTrEMBL:Q5NF01,Genbank:YP_170391.1,GeneID:3192088;gbkey=CDS;product=hypothetical protein;protein_id=YP_170391.1;transl_table=11
NC_006570.2	RefSeq	gene	1504578	1505660	.	-	.	ID=gene1490;Name=wbtI;Dbxref=GeneID:3192086;gbkey=Gene;gene=wbtI;locus_tag=FTT_1455c
NC_006570.2	RefSeq	CDS	1504578	1505660	.	-	0	ID=cds1308;Name=YP_170392.1;Parent=gene1490;Note=Similarity to Q97GL6 Sugar transaminase%2C involved in dTDP-4-amino-4%2C6-dideoxyglucose biosynthesis from Clostridium acetobutylicum %28364 aa%29. FASTA: opt: 1344 Z-score: 1521.8 E%28%29: 6.5e-77 Smith-Waterman score: 1344%3B 59.155 identity in 355 aa overlap;Dbxref=GOA:Q79RC9,InterPro:IPR015422,UniProtKB%2FTrEMBL:Q79RC9,Genbank:YP_170392.1,GeneID:3192086;gbkey=CDS;product=sugar transamine%2Fperosamine synthetase;protein_id=YP_170392.1;transl_table=11
NC_006570.2	RefSeq	gene	1505653	1507539	.	-	.	ID=gene1491;Name=wbtH;Dbxref=GeneID:3192087;gbkey=Gene;gene=wbtH;locus_tag=FTT_1456c
NC_006570.2	RefSeq	CDS	1505653	1507539	.	-	0	ID=cds1309;Name=YP_170393.1;Parent=gene1491;Note=Similar to Q8GGB6 Asparagine synthase-like protein from Pseudomonas aeruginosa %28627 aa%29. FASTA: opt: 1855 Z-score: 2052.2 E%28%29: 1.9e-106 Smith-Waterman score: 1855%3B 46.022 identity in 641 aa overlap;Dbxref=GOA:Q79RD0,InterPro:IPR017932,UniProtKB%2FTrEMBL:Q79RD0,Genbank:YP_170393.1,GeneID:3192087;gbkey=CDS;product=asparagine synthase;protein_id=YP_170393.1;transl_table=11
NC_006570.2	RefSeq	gene	1507539	1508639	.	-	.	ID=gene1492;Name=wbtG;Dbxref=GeneID:3192084;gbkey=Gene;gene=wbtG;locus_tag=FTT_1457c
NC_006570.2	RefSeq	CDS	1507539	1508639	.	-	0	ID=cds1310;Name=YP_170394.1;Parent=gene1492;Note=Similar to Q8ECG6 Glycosyl transferase group 1 family protein from Shewanella oneidensis %28373 aa%29. FASTA: opt: 531 Z-score: 625.5 E%28%29: 5.5e-27 Smith-Waterman score: 531%3B 32.353 identity in 374 aa overlap;Dbxref=GOA:Q79RD1,InterPro:IPR001296,UniProtKB%2FTrEMBL:Q79RD1,Genbank:YP_170394.1,GeneID:3192084;gbkey=CDS;product=glycosyl transferase family protein;protein_id=YP_170394.1;transl_table=11
NC_006570.2	RefSeq	gene	1508636	1509865	.	-	.	ID=gene1493;Name=wzy;Dbxref=GeneID:3192114;gbkey=Gene;gene=wzy;locus_tag=FTT_1458c
NC_006570.2	RefSeq	CDS	1508636	1509865	.	-	0	ID=cds1311;Name=YP_170395.1;Parent=gene1493;Note=membrane protein%2FO-antigen polymerase %28personal communication from authors%29;Dbxref=UniProtKB%2FTrEMBL:Q79RD2,Genbank:YP_170395.1,GeneID:3192114;gbkey=CDS;product=membrane protein%2FO-antigen protein;protein_id=YP_170395.1;transl_table=11
NC_006570.2	RefSeq	gene	1509882	1510853	.	-	.	ID=gene1494;Name=wbtF;Dbxref=GeneID:3192079;gbkey=Gene;gene=wbtF;locus_tag=FTT_1459c
NC_006570.2	RefSeq	CDS	1509882	1510853	.	-	0	ID=cds1312;Name=YP_170396.1;Parent=gene1494;Note=Similar to Q8KN66 WbpP from Pseudomonas aeruginosa %28341 aa%29. FASTA: opt: 1033 Z-score: 1225.7 E%28%29: 2e-60 Smith-Waterman score: 1033%3B 51.562identity in 320 aa overlap;Dbxref=GOA:Q79RD3,HSSP:1A9Y,InterPro:IPR016040,UniProtKB%2FTrEMBL:Q79RD3,Genbank:YP_170396.1,GeneID:3192079;gbkey=CDS;product=NAD dependent epimerase;protein_id=YP_170396.1;transl_table=11
NC_006570.2	RefSeq	gene	1510853	1512163	.	-	.	ID=gene1495;Name=wbtE;Dbxref=GeneID:3192081;gbkey=Gene;gene=wbtE;locus_tag=FTT_1460c
NC_006570.2	RefSeq	CDS	1510853	1512163	.	-	0	ID=cds1313;Name=YP_170397.1;Parent=gene1495;Note=Similar to Q8EMC3 Vi polysaccharide biosynthesis from Oceanobacillus iheyensis %28437 aa%29. FASTA: opt: 1817 Z-score: 2048.6 E%28%29: 2.9e-106 Smith-Waterman score: 1817%3B 59.268 identity in 437 aa overlap;Dbxref=GOA:Q79RD4,InterPro:IPR017476,UniProtKB%2FTrEMBL:Q79RD4,Genbank:YP_170397.1,GeneID:3192081;gbkey=CDS;product=UDP-glucose%2FGDP-mannose dehydrogenase;protein_id=YP_170397.1;transl_table=11
NC_006570.2	RefSeq	gene	1512181	1513272	.	-	.	ID=gene1496;Name=wbtD;Dbxref=GeneID:3192078;gbkey=Gene;gene=wbtD;locus_tag=FTT_1461c
NC_006570.2	RefSeq	CDS	1512181	1513272	.	-	0	ID=cds1314;Name=YP_170398.1;Parent=gene1496;Note=Similar to Q8EMF7 Galacturonosyl transferase from Oceanobacillus iheyensis %28362 aa%29. FASTA: opt: 908 Z-score: 1050.2 E%28%29: 1.2e-50 Smith-Waterman score: 908%3B 40.223 identity in 358 aa overlap;Dbxref=GOA:Q79RD5,InterPro:IPR001296,UniProtKB%2FTrEMBL:Q79RD5,Genbank:YP_170398.1,GeneID:3192078;gbkey=CDS;product=galacturonosyl transferase;protein_id=YP_170398.1;transl_table=11
NC_006570.2	RefSeq	gene	1513262	1514053	.	-	.	ID=gene1497;Name=wbtC;Dbxref=GeneID:3191944;gbkey=Gene;gene=wbtC;locus_tag=FTT_1462c
NC_006570.2	RefSeq	CDS	1513262	1514053	.	-	0	ID=cds1315;Name=YP_170399.1;Parent=gene1497;Note=Similar to Q9K6L4 UDP-glucose 4-epimerase from Bacillus halodurans %28282 aa%29. FASTA: opt: 758 Z-score: 904.3 E%28%29: 1.6e-42 Smith-Waterman score: 758%3B 45.455 identity in 264 aa overlap;Dbxref=GOA:Q79RD6,InterPro:IPR016040,UniProtKB%2FTrEMBL:Q79RD6,Genbank:YP_170399.1,GeneID:3191944;gbkey=CDS;product=UDP-glucose 4-epimerase;protein_id=YP_170399.1;transl_table=11
NC_006570.2	RefSeq	gene	1514055	1514672	.	-	.	ID=gene1498;Name=wbtB;Dbxref=GeneID:3191948;gbkey=Gene;gene=wbtB;locus_tag=FTT_1463c
NC_006570.2	RefSeq	CDS	1514055	1514672	.	-	0	ID=cds1316;Name=YP_170400.1;Parent=gene1498;Note=Similarity to Q9K6L3 Galactosyltransferase from Bacillus halodurans %28207 aa%29. FASTA: opt: 902 Z-score: 1122.0 E%28%29: 1.2e-54 Smith-Waterman score: 902%3B 66.667 identity in 195 aa overlap;Dbxref=GOA:Q79RD7,InterPro:IPR003362,UniProtKB%2FTrEMBL:Q79RD7,Genbank:YP_170400.1,GeneID:3191948;gbkey=CDS;product=galactosyl transferase;protein_id=YP_170400.1;transl_table=11
NC_006570.2	RefSeq	gene	1514680	1516416	.	-	.	ID=gene1499;Name=wbtA;Dbxref=GeneID:3191939;gbkey=Gene;gene=wbtA;locus_tag=FTT_1464c
NC_006570.2	RefSeq	CDS	1514680	1516416	.	-	0	ID=cds1317;Name=YP_170401.1;Parent=gene1499;Note=Similar to Q9S4V4 PglF from Campylobacter jejuni %28590 aa%29. FASTA: opt: 1343 Z-score: 1435.9 E%28%29: 3.9e-72 Smith-Waterman score: 1378%3B 43.543identity in 604 aa overlap;Dbxref=GOA:Q79RD8,InterPro:IPR016040,UniProtKB%2FTrEMBL:Q79RD8,Genbank:YP_170401.1,GeneID:3191939;gbkey=CDS;product=dTDP-glucose 4%2C6-dehydratase;protein_id=YP_170401.1;transl_table=11
NC_006570.2	RefSeq	repeat_region	1516492	1516510	.	-	.	ID=id233;Note=ISFtu2 19bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	gene	1516518	1517261	.	-	.	ID=gene1500;Name=isftu2;Dbxref=GeneID:3190875;gbkey=Gene;gene=isftu2;locus_tag=FTT_1465c
NC_006570.2	RefSeq	CDS	1516518	1517261	.	-	0	ID=cds1318;Name=YP_170402.1;Parent=gene1500;Note=ISFtu2. Transposase%2C member of the IS5 family. Identical to Q8GM03  transposase from Francisella tularensis %28247 aa%29.;Dbxref=GOA:Q8GM03,InterPro:IPR002559,UniProtKB%2FTrEMBL:Q8GM03,Genbank:YP_170402.1,GeneID:3190875;gbkey=CDS;product=transposase;protein_id=YP_170402.1;transl_table=11
NC_006570.2	RefSeq	repeat_region	1517338	1517356	.	-	.	ID=id234;Note=ISFtu2 19bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	gene	1517497	1518347	.	-	.	ID=gene1501;Name=add2;Dbxref=GeneID:3192400;gbkey=Gene;gene=add2;locus_tag=FTT_1466c;pseudo=true
NC_006570.2	RefSeq	gene	1518366	1519853	.	-	.	ID=gene1502;Name=nadB;Dbxref=GeneID:3192075;gbkey=Gene;gene=nadB;locus_tag=FTT_1467c
NC_006570.2	RefSeq	CDS	1518366	1519853	.	-	0	ID=cds1319;Name=YP_170403.1;Parent=gene1502;Note=Similar to Q8XQG4 L-aspartate oxidase 2 from Ralstonia solanacearum %28536 aa%29. FASTA: opt: 1043 Z-score: 1161.3 E%28%29: 7.8e-57 Smith-Waterman score: 1043%3B 38.008 identity in 492 aa overlap;Dbxref=GOA:Q5NEY9,InterPro:IPR013027,UniProtKB%2FTrEMBL:Q5NEY9,Genbank:YP_170403.1,GeneID:3192075;gbkey=CDS;product=L-aspartate oxidase;protein_id=YP_170403.1;transl_table=11
NC_006570.2	RefSeq	gene	1519856	1520719	.	-	.	ID=gene1503;Name=nadC;Dbxref=GeneID:3190900;gbkey=Gene;gene=nadC;locus_tag=FTT_1468c
NC_006570.2	RefSeq	CDS	1519856	1520719	.	-	0	ID=cds1320;Name=YP_170404.1;Parent=gene1503;Note=Similar to Q8DC25 Nicotinate-nucleotide pyrophosphorylase from Vibrio vulnificus %28295 aa%29. FASTA: opt: 888 Z-score: 999.5 E%28%29: 8e-48 Smith-Waterman score: 888%3B 53.737 identity in 281 aa overlap;Dbxref=GOA:Q5NEY8,InterPro:IPR013785,UniProtKB%2FTrEMBL:Q5NEY8,Genbank:YP_170404.1,GeneID:3190900;gbkey=CDS;product=nicotinate-nucleotide pyrophosphorylase;protein_id=YP_170404.1;transl_table=11
NC_006570.2	RefSeq	gene	1520728	1521753	.	-	.	ID=gene1504;Name=nadA;Dbxref=GeneID:3192072;gbkey=Gene;gene=nadA;locus_tag=FTT_1469c
NC_006570.2	RefSeq	CDS	1520728	1521753	.	-	0	ID=cds1321;Name=YP_170405.1;Parent=gene1504;Note=3 different subfamilies%3B catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate;Dbxref=GOA:Q5NEY7,InterPro:IPR003473,UniProtKB%2FTrEMBL:Q5NEY7,Genbank:YP_170405.1,GeneID:3192072;gbkey=CDS;product=quinolinate synthetase;protein_id=YP_170405.1;transl_table=11
NC_006570.2	RefSeq	gene	1521774	1522346	.	-	.	ID=gene1505;Name=gmk;Dbxref=GeneID:3192552;gbkey=Gene;gene=gmk;locus_tag=FTT_1470c
NC_006570.2	RefSeq	CDS	1521774	1522346	.	-	0	ID=cds1322;Name=YP_170406.1;Parent=gene1505;Note=Essential for recycling GMP and indirectly%2C cGMP;Dbxref=GOA:Q5NEY6,InterPro:IPR017665,UniProtKB%2FSwiss-Prot:Q5NEY6,Genbank:YP_170406.1,GeneID:3192552;gbkey=CDS;product=guanylate kinase;protein_id=YP_170406.1;transl_table=11
NC_006570.2	RefSeq	gene	1522463	1524172	.	-	.	ID=gene1506;Name=deaD;Dbxref=GeneID:3191508;gbkey=Gene;gene=deaD;locus_tag=FTT_1471c
NC_006570.2	RefSeq	CDS	1522463	1524172	.	-	0	ID=cds1323;Name=YP_170407.1;Parent=gene1506;Note=Similar to DEAD_KLEPN %28P33906%29 Cold-shock DEAD-box protein A %28ATP-dependent RNA helicase deaD%29 from Klebsiella pneumoniae %28642 aa%29. FASTA: opt: 1669 Z-score: 1759.9 E%28%29: 3.5e-90 Smith-Waterman score: 1669%3B 45.070 identity in 568 aa overlap;Dbxref=GOA:Q5NEY5,InterPro:IPR014021,UniProtKB%2FTrEMBL:Q5NEY5,Genbank:YP_170407.1,GeneID:3191508;gbkey=CDS;product=cold-shock DEAD-box protein A;protein_id=YP_170407.1;transl_table=11
NC_006570.2	RefSeq	gene	1524237	1524515	.	-	.	ID=gene1507;Name=ppiC;Dbxref=GeneID:3192184;gbkey=Gene;gene=ppiC;locus_tag=FTT_1472c
NC_006570.2	RefSeq	CDS	1524237	1524515	.	-	0	ID=cds1324;Name=YP_170408.1;Parent=gene1507;Note=Identical to Q9ETL6  parvulin %28 peptidyl-prolyl cis-trans isomerase%29 from Francisella tularensis ssp. tularensis strain SchuS4 %28FSC237%29 %2892 aa%29.;Dbxref=GOA:Q7BLU3,InterPro:IPR000297,UniProtKB%2FTrEMBL:Q7BLU3,Genbank:YP_170408.1,GeneID:3192184;gbkey=CDS;product=peptidyl-prolyl cis-trans isomerase;protein_id=YP_170408.1;transl_table=11
NC_006570.2	RefSeq	gene	1524610	1526004	.	-	.	ID=gene1508;Name=galP2;Dbxref=GeneID:3191585;gbkey=Gene;gene=galP2;locus_tag=FTT_1473c
NC_006570.2	RefSeq	CDS	1524610	1526004	.	-	0	ID=cds1325;Name=YP_170409.1;Parent=gene1508;Note=Similar to GALP__ECOLI Galactose-proton symporter from E. coli %28464 aa%29. FASTA: opt: 965 Z-score: 1103.1 E%28%29: 1.4e-53 Smith-Waterman score: 965%3B 36.226 identity in 461 aa overlap;Dbxref=GOA:Q5NEY3,InterPro:IPR005829,UniProtKB%2FTrEMBL:Q5NEY3,Genbank:YP_170409.1,GeneID:3191585;gbkey=CDS;product=major facilitator superfamily galactose-proton symporter;protein_id=YP_170409.1;transl_table=11
NC_006570.2	RefSeq	gene	1526036	1527418	.	-	.	ID=gene1509;Name=galP1;Dbxref=GeneID:3191546;gbkey=Gene;gene=galP1;locus_tag=FTT_1474c
NC_006570.2	RefSeq	CDS	1526036	1527418	.	-	0	ID=cds1326;Name=YP_170410.1;Parent=gene1509;Note=Similar to AAO70555 %28Q8XEV6%29 Galactose-proton symport from Salmonella typhimurium %28464 aa%29. FASTA: opt: 1295 Z-score: 1483.7 E%28%29: 8.6e-75 Smith-Waterman score: 1295%3B 45.140 identity in 463 aa overlap;Dbxref=GOA:Q5NEY2,InterPro:IPR005829,UniProtKB%2FTrEMBL:Q5NEY2,Genbank:YP_170410.1,GeneID:3191546;gbkey=CDS;product=major facilitator superfamily galactose-proton symporter;protein_id=YP_170410.1;transl_table=11
NC_006570.2	RefSeq	gene	1527509	1528534	.	+	.	ID=gene1510;Name=galT;Dbxref=GeneID:3192373;gbkey=Gene;gene=galT;locus_tag=FTT_1475
NC_006570.2	RefSeq	CDS	1527509	1528534	.	+	0	ID=cds1327;Name=YP_170411.1;Parent=gene1510;Note=catalyzes the interconversion of UDP-galactose and galactose-1-P with UDP-galactose and glucose-1-P;Dbxref=GOA:Q5NEY1,InterPro:IPR019779,UniProtKB%2FTrEMBL:Q5NEY1,Genbank:YP_170411.1,GeneID:3192373;gbkey=CDS;product=galactose-1-phosphate uridylyltransferase;protein_id=YP_170411.1;transl_table=11
NC_006570.2	RefSeq	gene	1528537	1529685	.	+	.	ID=gene1511;Name=galK;Dbxref=GeneID:3191539;gbkey=Gene;gene=galK;locus_tag=FTT_1476
NC_006570.2	RefSeq	CDS	1528537	1529685	.	+	0	ID=cds1328;Name=YP_170412.1;Parent=gene1511;Note=Similar to GAL1_ACTPL Galactokinase from Actinobacillus pleuropneumoniae %28384 aa%29 FASTA: opt: 959 Z-score: 1098.0 E%28%29: 2.6e-53 Smith-Waterman score: 959%3B 38.710identity in 372 aa overlap;Dbxref=GOA:Q5NEY0,InterPro:IPR019741,UniProtKB%2FTrEMBL:Q5NEY0,Genbank:YP_170412.1,GeneID:3191539;gbkey=CDS;product=galactokinase;protein_id=YP_170412.1;transl_table=11
NC_006570.2	RefSeq	gene	1529682	1530077	.	-	.	ID=gene1512;Name=FTT_1477c;Dbxref=GeneID:3191765;gbkey=Gene;locus_tag=FTT_1477c
NC_006570.2	RefSeq	CDS	1529682	1530077	.	-	0	ID=cds1329;Name=YP_170413.1;Parent=gene1512;Note=Similar to Q88NK0 Conserved hypothetical protein from Pseudomonas putida %28139 aa%29. FASTA: opt: 362 Z-score: 463.4 E%28%29: 5.9e-18 Smith-Waterman score: 362%3B 40.458 identity in 131 aa overlap ORF ftt1477c;Dbxref=GOA:Q5NEX9,InterPro:IPR011151,UniProtKB%2FTrEMBL:Q5NEX9,Genbank:YP_170413.1,GeneID:3191765;gbkey=CDS;product=hypothetical protein;protein_id=YP_170413.1;transl_table=11
NC_006570.2	RefSeq	gene	1530070	1530822	.	-	.	ID=gene1513;Name=kdsB;Dbxref=GeneID:3192251;gbkey=Gene;gene=kdsB;locus_tag=FTT_1478c
NC_006570.2	RefSeq	CDS	1530070	1530822	.	-	0	ID=cds1330;Name=YP_170414.2;Parent=gene1513;Note=CMP-2-keto-3-deoxyoctulosonic acid synthetase%3B catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS;Dbxref=GOA:Q5NEX8,InterPro:IPR004528,UniProtKB%2FSwiss-Prot:Q5NEX8,Genbank:YP_170414.2,GeneID:3192251;gbkey=CDS;product=3-deoxy-manno-octulosonate cytidylyltransferase;protein_id=YP_170414.2;transl_table=11
NC_006570.2	RefSeq	gene	1530815	1531003	.	-	.	ID=gene1514;Name=FTT_1479c;Dbxref=GeneID:3192303;gbkey=Gene;locus_tag=FTT_1479c
NC_006570.2	RefSeq	CDS	1530815	1531003	.	-	0	ID=cds1331;Name=YP_170415.1;Parent=gene1514;Note=Similarity to Q8DAV0 Conserved hypothetical protein from Vibrio vulnificus %2859 aa%29. FASTA: opt: 252 Z-score: 369.5 E%28%29: 1e-12 Smith-Waterman score: 252%3B 56.140 identity in 57 aa overlap ORF ftt1479c;Dbxref=InterPro:IPR005651,UniProtKB%2FSwiss-Prot:Q5NEX7,Genbank:YP_170415.1,GeneID:3192303;gbkey=CDS;product=hypothetical protein;protein_id=YP_170415.1;transl_table=11
NC_006570.2	RefSeq	gene	1531388	1531567	.	-	.	ID=gene1515;Name=FTT_1480c;Dbxref=GeneID:3192306;gbkey=Gene;locus_tag=FTT_1480c
NC_006570.2	RefSeq	CDS	1531388	1531567	.	-	0	ID=cds1332;Name=YP_170416.1;Parent=gene1515;Note=ORF ftt1480c;Dbxref=GOA:Q5NEX6,InterPro:IPR000326,UniProtKB%2FTrEMBL:Q5NEX6,Genbank:YP_170416.1,GeneID:3192306;gbkey=CDS;product=hypothetical protein;protein_id=YP_170416.1;transl_table=11
NC_006570.2	RefSeq	repeat_region	1531629	1531640	.	-	.	ID=id235;Note=ISFtu1 12bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	gene	1531728	1532512	.	-	.	ID=gene1516;Name=isftu1;Dbxref=GeneID:3191013;gbkey=Gene;gene=isftu1;locus_tag=FTT_1481c
NC_006570.2	RefSeq	CDS	1532186	1532512	.	-	0	ID=cds1333;Name=YP_170417.1;Parent=gene1516;Note=ISFtu1. Transposase%2C member of the IS630 Tc-1 mariner family. Identical to Q93EJ6  transposase from Francisella tularensis %28118 aa%29 from aa 144-261. Identical to Q93EJ7  transposase from Francisella tularensis %28126 aa%29 from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF%27s. ORF1 %28identical to Q93EJ7%29 contains a programmed ribosomal frameshifting motif%2C 5%27-AAAAAAAG-3%27 at aa position 109 which permits frameshifting to ORF2 %28identical to Q93EJ6%29 to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family%2C and also mariner elements%2C show that this transposase shares strongly conserved residues%2C including a fully conserved dipeptide%2CAsp-Glu %28DE%29%2C and a block consisting of a fully conserved Asp and highly conserved Glu%2C separated by 34 or 35 residues %28D35E%29. The conserved dipeptide is only present if ribosomal frameshifting occurs.;Dbxref=UniProtKB%2FTrEMBL:Q5NIH2,Genbank:YP_170417.1,GeneID:3191013;gbkey=CDS;product=transposase;protein_id=YP_170417.1;transl_table=11
NC_006570.2	RefSeq	CDS	1531728	1532186	.	-	0	ID=cds1333;Name=YP_170417.1;Parent=gene1516;Note=ISFtu1. Transposase%2C member of the IS630 Tc-1 mariner family. Identical to Q93EJ6  transposase from Francisella tularensis %28118 aa%29 from aa 144-261. Identical to Q93EJ7  transposase from Francisella tularensis %28126 aa%29 from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF%27s. ORF1 %28identical to Q93EJ7%29 contains a programmed ribosomal frameshifting motif%2C 5%27-AAAAAAAG-3%27 at aa position 109 which permits frameshifting to ORF2 %28identical to Q93EJ6%29 to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family%2C and also mariner elements%2C show that this transposase shares strongly conserved residues%2C including a fully conserved dipeptide%2CAsp-Glu %28DE%29%2C and a block consisting of a fully conserved Asp and highly conserved Glu%2C separated by 34 or 35 residues %28D35E%29. The conserved dipeptide is only present if ribosomal frameshifting occurs.;Dbxref=UniProtKB%2FTrEMBL:Q5NIH2,Genbank:YP_170417.1,GeneID:3191013;gbkey=CDS;product=transposase;protein_id=YP_170417.1;transl_table=11
NC_006570.2	RefSeq	repeat_region	1532533	1532548	.	-	.	ID=id236;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	1532549	1532564	.	-	.	ID=id237;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	1532565	1532576	.	-	.	ID=id238;Note=ISFtu1 12bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	gene	1532644	1532862	.	+	.	ID=gene1517;Name=FTT_1482;Dbxref=GeneID:8303717;gbkey=Gene;locus_tag=FTT_1482;pseudo=true
NC_006570.2	RefSeq	repeat_region	1532876	1532884	.	-	.	ID=id239;Note=9 bp terminal inverse repeat;gbkey=repeat_region
NC_006570.2	RefSeq	gene	1532885	1534297	.	-	.	ID=gene1518;Name=lpd;Dbxref=GeneID:3192301;gbkey=Gene;gene=lpd;locus_tag=FTT_1483c
NC_006570.2	RefSeq	CDS	1532885	1534297	.	-	0	ID=cds1334;Name=YP_170418.1;Parent=gene1518;Note=Similar to AAO90013 %28Q83E67%29 Dihydrolipoamide dehydrogenase from Coxiella burnetti %28474 aa%29. FASTA: opt: 2052 Z-score: 2129.3 E%28%29: 9.5e-111 Smith-Waterman score: 2052%3B 65.890 identity in 472 aa overlap.;Dbxref=GOA:Q5NEX4,InterPro:IPR013027,UniProtKB%2FTrEMBL:Q5NEX4,Genbank:YP_170418.1,GeneID:3192301;gbkey=CDS;product=dihydrolipoamide dehydrogenase;protein_id=YP_170418.1;transl_table=11
NC_006570.2	RefSeq	gene	1534311	1536206	.	-	.	ID=gene1519;Name=aceF;Dbxref=GeneID:3192412;gbkey=Gene;gene=aceF;locus_tag=FTT_1484c
NC_006570.2	RefSeq	CDS	1534311	1536206	.	-	0	ID=cds1335;Name=YP_170419.1;Parent=gene1519;Note=E2 component of pyruvate dehydrogenase multienzyme complex%3B in Escherichia coli AceF contains three N-terminal lipoyl domains;Dbxref=GOA:Q5NEX3,InterPro:IPR006256,UniProtKB%2FTrEMBL:Q5NEX3,Genbank:YP_170419.1,GeneID:3192412;gbkey=CDS;product=dihydrolipoamide acetyltransferase;protein_id=YP_170419.1;transl_table=11
NC_006570.2	RefSeq	gene	1536224	1538905	.	-	.	ID=gene1520;Name=aceE;Dbxref=GeneID:3192411;gbkey=Gene;gene=aceE;locus_tag=FTT_1485c
NC_006570.2	RefSeq	CDS	1536224	1538905	.	-	0	ID=cds1336;Name=YP_170420.1;Parent=gene1520;Note=E1 component%3B part of pyruvate dehydrogenase%3B forms a complex with DlaT and LpdC;Dbxref=GOA:Q5NEX2,InterPro:IPR015941,UniProtKB%2FTrEMBL:Q5NEX2,Genbank:YP_170420.1,GeneID:3192411;gbkey=CDS;product=pyruvate dehydrogenase subunit E1;protein_id=YP_170420.1;transl_table=11
NC_006570.2	RefSeq	gene	1539205	1540341	.	-	.	ID=gene1521;Name=FTT_1486c;Dbxref=GeneID:3190829;gbkey=Gene;locus_tag=FTT_1486c
NC_006570.2	RefSeq	CDS	1539205	1540341	.	-	0	ID=cds1337;Name=YP_170421.1;Parent=gene1521;Note=Similar to AAO91321 %28Q83AQ3%29 Hypothetical protein from Coxiella burnetti %28388 aa%29. FASTA: opt: 858 Z-score: 1007.0 E%28%29: 3.1e-48 Smith-Waterman score: 858 38.504 identity in 361 aa overlap ORF ftt1486c;Dbxref=InterPro:IPR003788,UniProtKB%2FTrEMBL:Q5NEX1,Genbank:YP_170421.1,GeneID:3190829;gbkey=CDS;product=hypothetical protein;protein_id=YP_170421.1;transl_table=11
NC_006570.2	RefSeq	gene	1540469	1541083	.	+	.	ID=gene1522;Name=coaE;Dbxref=GeneID:3191932;gbkey=Gene;gene=coaE;locus_tag=FTT_1487
NC_006570.2	RefSeq	CDS	1540469	1541083	.	+	0	ID=cds1338;Name=YP_170422.1;Parent=gene1522;Note=catalyzes the phosphorylation of the 3%27-hydroxyl group of dephosphocoenzyme A to form coenzyme A%3B involved in coenzyme A biosynthesis;Dbxref=GOA:Q5NEX0,InterPro:IPR001977,UniProtKB%2FSwiss-Prot:Q5NEX0,Genbank:YP_170422.1,GeneID:3191932;gbkey=CDS;product=dephospho-CoA kinase;protein_id=YP_170422.1;transl_table=11
NC_006570.2	RefSeq	gene	1541116	1541192	.	+	.	ID=gene1523;Name=tRNA-Arg %28ACG%29;Dbxref=GeneID:8303679;description=tRNA-Arg %28ACG%29;gbkey=Gene;gene=tRNA-Arg %28ACG%29;locus_tag=FTT_t30
NC_006570.2	RefSeq	tRNA	1541116	1541192	.	+	.	ID=rna36;Dbxref=GeneID:8303679;codons=28;gbkey=tRNA;product=tRNA-Arg
NC_006570.2	RefSeq	exon	1541116	1541192	.	+	.	ID=id240;Parent=rna36;Dbxref=GeneID:8303679;codons=28;gbkey=tRNA;product=tRNA-Arg
NC_006570.2	RefSeq	gene	1541207	1541278	.	+	.	ID=gene1524;Name=tRNA-Gly %28GCC%29;Dbxref=GeneID:8303714;description=tRNA-Gly %28GCC%29;gbkey=Gene;gene=tRNA-Gly %28GCC%29;locus_tag=FTT_t31
NC_006570.2	RefSeq	tRNA	1541207	1541278	.	+	.	ID=rna37;Dbxref=GeneID:8303714;codons=61;gbkey=tRNA;product=tRNA-Gly
NC_006570.2	RefSeq	exon	1541207	1541278	.	+	.	ID=id241;Parent=rna37;Dbxref=GeneID:8303714;codons=61;gbkey=tRNA;product=tRNA-Gly
NC_006570.2	RefSeq	gene	1541380	1542384	.	+	.	ID=gene1525;Name=trpS;Dbxref=GeneID:3190995;gbkey=Gene;gene=trpS;locus_tag=FTT_1488
NC_006570.2	RefSeq	CDS	1541380	1542384	.	+	0	ID=cds1339;Name=YP_170423.1;Parent=gene1525;Note=catalyzes a two-step reaction%2C first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA;Dbxref=GOA:Q5NEW9,InterPro:IPR014729,UniProtKB%2FTrEMBL:Q5NEW9,Genbank:YP_170423.1,GeneID:3190995;gbkey=CDS;product=tryptophanyl-tRNA synthetase;protein_id=YP_170423.1;transl_table=11
NC_006570.2	RefSeq	gene	1542386	1543111	.	+	.	ID=gene1526;Name=FTT_1489;Dbxref=GeneID:3190835;gbkey=Gene;locus_tag=FTT_1489
NC_006570.2	RefSeq	CDS	1542386	1543111	.	+	0	ID=cds1340;Name=YP_170424.1;Parent=gene1526;Note=ORF ftt1489;Dbxref=UniProtKB%2FTrEMBL:Q5NEW8,Genbank:YP_170424.1,GeneID:3190835;gbkey=CDS;product=hypothetical protein;protein_id=YP_170424.1;transl_table=11
NC_006570.2	RefSeq	gene	1543121	1544419	.	+	.	ID=gene1527;Name=FTT_1490;Dbxref=GeneID:3192492;gbkey=Gene;locus_tag=FTT_1490
NC_006570.2	RefSeq	CDS	1543121	1544419	.	+	0	ID=cds1341;Name=YP_170425.1;Parent=gene1527;Note=Similar to Q9RZK7 NA%2B%2FH%2B antiporter%2C %2C from Deinococcus radiodurans %28422 aa%29. FASTA: opt: 529 Z-score: 612.1 E%28%29: 3.1e-26 Smith-Waterman score: 771%3B 36.211 identity in 417 aa overlap ORF ftt1490;Dbxref=GOA:Q5NEW7,InterPro:IPR018422,UniProtKB%2FTrEMBL:Q5NEW7,Genbank:YP_170425.1,GeneID:3192492;gbkey=CDS;product=Na%2B%2FH%2B antiporter;protein_id=YP_170425.1;transl_table=11
NC_006570.2	RefSeq	gene	1544818	1545132	.	-	.	ID=gene1528;Name=FTT_1491c;Dbxref=GeneID:3190800;gbkey=Gene;locus_tag=FTT_1491c
NC_006570.2	RefSeq	CDS	1544818	1545132	.	-	0	ID=cds1342;Name=YP_170426.1;Parent=gene1528;Note=ORF ftt1491c;Dbxref=UniProtKB%2FTrEMBL:Q5NEW6,Genbank:YP_170426.1,GeneID:3190800;gbkey=CDS;product=hypothetical protein;protein_id=YP_170426.1;transl_table=11
NC_006570.2	RefSeq	gene	1545228	1545854	.	-	.	ID=gene1529;Name=FTT_1492c;Dbxref=GeneID:3192490;gbkey=Gene;locus_tag=FTT_1492c
NC_006570.2	RefSeq	CDS	1545228	1545854	.	-	0	ID=cds1343;Name=YP_170427.1;Parent=gene1529;Note=ORF ftt1492c;Dbxref=GOA:Q5NEW5,InterPro:IPR010488,UniProtKB%2FTrEMBL:Q5NEW5,Genbank:YP_170427.1,GeneID:3192490;gbkey=CDS;product=hypothetical protein;protein_id=YP_170427.1;transl_table=11
NC_006570.2	RefSeq	gene	1546344	1546739	.	-	.	ID=gene1530;Name=FTT_1493c;Dbxref=GeneID:3191764;gbkey=Gene;locus_tag=FTT_1493c
NC_006570.2	RefSeq	CDS	1546344	1546739	.	-	0	ID=cds1344;Name=YP_170428.1;Parent=gene1530;Note=ORF ftt1493c;Dbxref=UniProtKB%2FTrEMBL:Q5NEW4,Genbank:YP_170428.1,GeneID:3191764;gbkey=CDS;product=hypothetical protein;protein_id=YP_170428.1;transl_table=11
NC_006570.2	RefSeq	gene	1546741	1547625	.	-	.	ID=gene1531;Name=murQ;Dbxref=GeneID:3192311;gbkey=Gene;gene=murQ;locus_tag=FTT_1494c
NC_006570.2	RefSeq	CDS	1546741	1547625	.	-	0	ID=cds1345;Name=YP_170429.1;Parent=gene1531;Note=catalyzes the cleavage of the lactyl ether moiety of N-acetylmuramic acid-6-phosphate %28MurNAc-6-P%29 to form N-acetylglucosamine-6-phosphate %28GlcNAc-6-P%29 and lactate%3B involved in MurNAc dissimilation pathway;Dbxref=GOA:Q5NEW3,InterPro:IPR005488,UniProtKB%2FSwiss-Prot:Q5NEW3,Genbank:YP_170429.1,GeneID:3192311;gbkey=CDS;product=N-acetylmuramic acid 6-phosphate etherase;protein_id=YP_170429.1;transl_table=11
NC_006570.2	RefSeq	gene	1547622	1549586	.	-	.	ID=gene1532;Name=FTT_1495c;Dbxref=GeneID:3192314;gbkey=Gene;locus_tag=FTT_1495c
NC_006570.2	RefSeq	CDS	1547622	1549586	.	-	0	ID=cds1346;Name=YP_170430.1;Parent=gene1532;Note=ORF ftt1495c;Dbxref=UniProtKB%2FTrEMBL:Q5NEW2,Genbank:YP_170430.1,GeneID:3192314;gbkey=CDS;product=hypothetical protein;protein_id=YP_170430.1;transl_table=11
NC_006570.2	RefSeq	gene	1549595	1550608	.	-	.	ID=gene1533;Name=FTT_1496c;Dbxref=GeneID:3190823;gbkey=Gene;locus_tag=FTT_1496c
NC_006570.2	RefSeq	CDS	1549595	1550608	.	-	0	ID=cds1347;Name=YP_170431.1;Parent=gene1533;Note=ORF ftt1496c;Dbxref=InterPro:IPR012902,UniProtKB%2FTrEMBL:Q5NEW1,Genbank:YP_170431.1,GeneID:3190823;gbkey=CDS;product=hypothetical protein;protein_id=YP_170431.1;transl_table=11
NC_006570.2	RefSeq	gene	1550589	1551092	.	-	.	ID=gene1534;Name=FTT_1497c;Dbxref=GeneID:3192312;gbkey=Gene;locus_tag=FTT_1497c
NC_006570.2	RefSeq	CDS	1550589	1551092	.	-	0	ID=cds1348;Name=YP_170432.1;Parent=gene1534;Note=ORF ftt1497c;Dbxref=UniProtKB%2FTrEMBL:Q5NEW0,Genbank:YP_170432.1,GeneID:3192312;gbkey=CDS;product=hypothetical protein;protein_id=YP_170432.1;transl_table=11
NC_006570.2	RefSeq	gene	1551112	1552059	.	-	.	ID=gene1535;Name=accA;Dbxref=GeneID:3192200;gbkey=Gene;gene=accA;locus_tag=FTT_1498c
NC_006570.2	RefSeq	CDS	1551112	1552059	.	-	0	ID=cds1349;Name=YP_170433.1;Parent=gene1535;Note=catalyzes the carboxylation of acetyl-CoA to malonyl-CoA%3B forms a tetramer composed of two alpha %28AccA%29 and two beta %28AccD%29 subunits%3B one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein;Dbxref=GOA:Q5NEV9,InterPro:IPR011763,UniProtKB%2FSwiss-Prot:Q5NEV9,Genbank:YP_170433.1,GeneID:3192200;gbkey=CDS;product=acetyl-CoA carboxylase carboxyltransferase subunit alpha;protein_id=YP_170433.1;transl_table=11
NC_006570.2	RefSeq	gene	1552193	1554766	.	+	.	ID=gene1536;Name=muts;Dbxref=GeneID:3192057;gbkey=Gene;gene=muts;locus_tag=FTT_1499
NC_006570.2	RefSeq	CDS	1552193	1554766	.	+	0	ID=cds1350;Name=YP_170434.1;Parent=gene1536;Note=This protein performs the mismatch recognition step during the DNA repair process;Dbxref=GOA:Q5NEV8,InterPro:IPR016151,UniProtKB%2FSwiss-Prot:Q5NEV8,Genbank:YP_170434.1,GeneID:3192057;gbkey=CDS;product=DNA mismatch repair protein MutS;protein_id=YP_170434.1;transl_table=11
NC_006570.2	RefSeq	gene	1554838	1555281	.	+	.	ID=gene1537;Name=secB2;Dbxref=GeneID:3191901;gbkey=Gene;gene=secB2;locus_tag=FTT_1500
NC_006570.2	RefSeq	CDS	1554838	1555281	.	+	0	ID=cds1351;Name=YP_170435.1;Parent=gene1537;Note=molecular chaperone that is required for the normal export of envelope proteins out of the cell cytoplasm%3B in Escherichia coli this proteins forms a homotetramer in the cytoplasm and delivers proteins to be exported to SecA;Dbxref=GOA:Q5NEV7,InterPro:IPR003708,UniProtKB%2FSwiss-Prot:Q5NEV7,Genbank:YP_170435.1,GeneID:3191901;gbkey=CDS;product=preprotein translocase subunit SecB;protein_id=YP_170435.1;transl_table=11
NC_006570.2	RefSeq	gene	1555475	1556695	.	+	.	ID=gene1538;Name=FTT_1501;Dbxref=GeneID:3190810;gbkey=Gene;locus_tag=FTT_1501;pseudo=true
NC_006570.2	RefSeq	gene	1556722	1557939	.	+	.	ID=gene1539;Name=FTT_1502;Dbxref=GeneID:3190878;gbkey=Gene;locus_tag=FTT_1502
NC_006570.2	RefSeq	CDS	1556722	1557939	.	+	0	ID=cds1352;Name=YP_170436.1;Parent=gene1539;Note=Similar to AAP17334 %28TRYP_ECOLI%29 Tyrosine-specific transport protein from E. coli %28403 aa%29. FASTA: opt: 741 Z-score: 839.5 E%28%29: 6.5e-39 Smith-Waterman score: 741%3B 32.663identity in 398 aa overlap ORF ftt1502;Dbxref=GOA:Q5NEV6,InterPro:IPR018227,UniProtKB%2FTrEMBL:Q5NEV6,Genbank:YP_170436.1,GeneID:3190878;gbkey=CDS;product=aromatic amino acid HAAP transporter;protein_id=YP_170436.1;transl_table=11
NC_006570.2	RefSeq	gene	1557949	1558827	.	+	.	ID=gene1540;Name=xerC;Dbxref=GeneID:3191568;gbkey=Gene;gene=xerC;locus_tag=FTT_1503
NC_006570.2	RefSeq	CDS	1557949	1558827	.	+	0	ID=cds1353;Name=YP_170437.1;Parent=gene1540;Note=Similar to Q88B11 Integrase%2Frecombinase XerC from Pseudomonas syringae %28295 aa%29. FASTA: opt: 790 Z-score: 939.6 E%28%29: 1.7e-44 Smith-Waterman score: 790%3B 42.177 identity in 294 aa overlap.;Dbxref=GOA:Q5NEV5,InterPro:IPR018247,UniProtKB%2FTrEMBL:Q5NEV5,Genbank:YP_170437.1,GeneID:3191568;gbkey=CDS;product=integrase%2Frecombinase XerC;protein_id=YP_170437.1;transl_table=11
NC_006570.2	RefSeq	gene	1558827	1559552	.	+	.	ID=gene1541;Name=FTT_1504;Dbxref=GeneID:3192496;gbkey=Gene;locus_tag=FTT_1504
NC_006570.2	RefSeq	CDS	1558827	1559552	.	+	0	ID=cds1354;Name=YP_170438.1;Parent=gene1541;Note=Similar to YHIQ_NEIGO P72077 Hypothetical 27.3kDa protein from Neisseria gonorrhoeae %28254 aa%29. FASTA: opt: 350 Z-score: 423.8 E%28%29: 9.3e-16 Smith-Waterman score: 350%3B 36.073 identity in 219 aa overlap. ORF ftt1504;Dbxref=InterPro:IPR007536,UniProtKB%2FSwiss-Prot:Q5NEV4,Genbank:YP_170438.1,GeneID:3192496;gbkey=CDS;product=hypothetical protein;protein_id=YP_170438.1;transl_table=11
NC_006570.2	RefSeq	gene	1559559	1560173	.	-	.	ID=gene1542;Name=FTT_1505c;Dbxref=GeneID:3190866;gbkey=Gene;locus_tag=FTT_1505c
NC_006570.2	RefSeq	CDS	1559559	1560173	.	-	0	ID=cds1355;Name=YP_170439.1;Parent=gene1542;Note=ORF ftt1505c;Dbxref=InterPro:IPR000633,UniProtKB%2FTrEMBL:Q5NEV3,Genbank:YP_170439.1,GeneID:3190866;gbkey=CDS;product=hypothetical protein;protein_id=YP_170439.1;transl_table=11
NC_006570.2	RefSeq	gene	1560261	1560839	.	+	.	ID=gene1543;Name=FTT_1506;Dbxref=GeneID:3190870;gbkey=Gene;locus_tag=FTT_1506
NC_006570.2	RefSeq	CDS	1560261	1560839	.	+	0	ID=cds1356;Name=YP_170440.1;Parent=gene1543;Note=ORF ftt1506;Dbxref=UniProtKB%2FTrEMBL:Q5NEV2,Genbank:YP_170440.1,GeneID:3190870;gbkey=CDS;product=hypothetical protein;protein_id=YP_170440.1;transl_table=11
NC_006570.2	RefSeq	gene	1560916	1561548	.	+	.	ID=gene1544;Name=FTT_1507;Dbxref=GeneID:3192309;gbkey=Gene;locus_tag=FTT_1507
NC_006570.2	RefSeq	CDS	1560916	1561548	.	+	0	ID=cds1357;Name=YP_170441.1;Parent=gene1544;Note=ORF ftt1507;Dbxref=UniProtKB%2FTrEMBL:Q5NEV1,Genbank:YP_170441.1,GeneID:3192309;gbkey=CDS;product=hypothetical protein;protein_id=YP_170441.1;transl_table=11
NC_006570.2	RefSeq	gene	1561664	1563607	.	-	.	ID=gene1545;Name=relA;Dbxref=GeneID:3191632;gbkey=Gene;gene=relA;locus_tag=FTT_1508c
NC_006570.2	RefSeq	CDS	1561664	1563607	.	-	0	ID=cds1358;Name=YP_170442.1;Parent=gene1545;Note=Similar to Q8EBQ4 GTP pyrophosphokinase from Shewenella oneidensis %28735 aa%29. FASTA: opt: 1566 Z-score: 1723.7 E%28%29: 3.7e-88 Smith-Waterman score: 1639%3B 39.744 identity in 624 aa overlap;Dbxref=GOA:Q5NEV0,InterPro:IPR007685,UniProtKB%2FTrEMBL:Q5NEV0,Genbank:YP_170442.1,GeneID:3191632;gbkey=CDS;product=GTP pyrophosphokinase;protein_id=YP_170442.1;transl_table=11
NC_006570.2	RefSeq	gene	1563976	1564332	.	-	.	ID=gene1546;Name=FTT_1509c;Dbxref=GeneID:3190812;gbkey=Gene;locus_tag=FTT_1509c
NC_006570.2	RefSeq	CDS	1563976	1564332	.	-	0	ID=cds1359;Name=YP_170443.1;Parent=gene1546;Note=ORF ftt1509c;Dbxref=UniProtKB%2FTrEMBL:Q5NEU9,Genbank:YP_170443.1,GeneID:3190812;gbkey=CDS;product=hypothetical protein;protein_id=YP_170443.1;transl_table=11
NC_006570.2	RefSeq	gene	1564366	1565562	.	-	.	ID=gene1547;Name=FTT_1510c;Dbxref=GeneID:3191763;gbkey=Gene;locus_tag=FTT_1510c
NC_006570.2	RefSeq	CDS	1564366	1565562	.	-	0	ID=cds1360;Name=YP_170444.1;Parent=gene1547;Note=Similar to Q8DAB5 Tyrosine-specific transport protein from Vibrio vulnificus %28401 aa%29. FASTA: opt: 804 Z-score: 930.6 E%28%29: 5.5e-44 Smith-Waterman score: 804%3B 35.309 identity in 405 aa overlap ORF ftt1510;Dbxref=GOA:Q5NEU8,InterPro:IPR018227,UniProtKB%2FTrEMBL:Q5NEU8,Genbank:YP_170444.1,GeneID:3191763;gbkey=CDS;product=aromatic amino acid HAAP transporter;protein_id=YP_170444.1;transl_table=11
NC_006570.2	RefSeq	gene	1565753	1566637	.	+	.	ID=gene1548;Name=FTT_1511;Dbxref=GeneID:3190797;gbkey=Gene;locus_tag=FTT_1511
NC_006570.2	RefSeq	CDS	1565753	1566637	.	+	0	ID=cds1361;Name=YP_170445.1;Parent=gene1548;Note=Similar to AAO90839 Membrane protein%2C  from Coxiella burnetii %28305 aa%29. FASTA: opt: 693 Z-score: 824.9 E%28%29: 4.3e-38 Smith-Waterman score: 693%3B 38.776 identity in 294 aa overlap. ORF ftt1511;Dbxref=GOA:Q5NEU7,InterPro:IPR000620,UniProtKB%2FTrEMBL:Q5NEU7,Genbank:YP_170445.1,GeneID:3190797;gbkey=CDS;product=hypothetical protein;protein_id=YP_170445.1;transl_table=11
NC_006570.2	RefSeq	gene	1566627	1567553	.	-	.	ID=gene1549;Name=dnaJ2;Dbxref=GeneID:3191530;gbkey=Gene;gene=dnaJ2;locus_tag=FTT_1512c
NC_006570.2	RefSeq	CDS	1566627	1567553	.	-	0	ID=cds1362;Name=YP_170446.1;Parent=gene1549;Note=Similar to CAD85066 %28Q82VD9%29 DnaJ N-terminal domain:DnaJ C terminal domain from Nitrosomonas europaea %28314 aa%29. FASTA opt: 800 Z-score: 823.9 E%28%29: 4.8e-38 39.482 identity in 309 aa overlap.;Dbxref=GOA:Q5NEU6,InterPro:IPR018253,UniProtKB%2FTrEMBL:Q5NEU6,Genbank:YP_170446.1,GeneID:3191530;gbkey=CDS;product=heat shock protein%2C hsp40;protein_id=YP_170446.1;transl_table=11
NC_006570.2	RefSeq	gene	1567752	1568468	.	+	.	ID=gene1550;Name=FTT_1513;Dbxref=GeneID:3192310;gbkey=Gene;locus_tag=FTT_1513;pseudo=true
NC_006570.2	RefSeq	gene	1568483	1568854	.	-	.	ID=gene1551;Name=FTT_1514c;Dbxref=GeneID:3192319;gbkey=Gene;locus_tag=FTT_1514c
NC_006570.2	RefSeq	CDS	1568483	1568854	.	-	0	ID=cds1363;Name=YP_170447.1;Parent=gene1551;Note=ORF ftt1514c;Dbxref=UniProtKB%2FTrEMBL:Q5NEU5,Genbank:YP_170447.1,GeneID:3192319;gbkey=CDS;product=hypothetical protein;protein_id=YP_170447.1;transl_table=11
NC_006570.2	RefSeq	gene	1568862	1569461	.	-	.	ID=gene1552;Name=FTT_1515c;Dbxref=GeneID:3192482;gbkey=Gene;locus_tag=FTT_1515c
NC_006570.2	RefSeq	CDS	1568862	1569461	.	-	0	ID=cds1364;Name=YP_170448.1;Parent=gene1552;Note=Similar to Q8XMV7 Hypothetical protein CPE0581 from Clostridium perfrigens %28195 aa%29. FASTA: opt: 348 Z-score: 432.5 E%28%29: 3.1e-16 Smith-Waterman score: 348%3B 33.333 identity in 189 aa overlap. FTT1563 is more likely to be phosphatidylcoline synthase. ORF ftt1515c;Dbxref=GOA:Q5NEU4,InterPro:IPR000462,UniProtKB%2FTrEMBL:Q5NEU4,Genbank:YP_170448.1,GeneID:3192482;gbkey=CDS;product=hypothetical protein;protein_id=YP_170448.1;transl_table=11
NC_006570.2	RefSeq	gene	1569461	1570876	.	-	.	ID=gene1553;Name=merA;Dbxref=GeneID:3192544;gbkey=Gene;gene=merA;locus_tag=FTT_1516c;pseudo=true
NC_006570.2	RefSeq	gene	1570879	1571598	.	-	.	ID=gene1554;Name=FTT_1517c;Dbxref=GeneID:3190872;gbkey=Gene;locus_tag=FTT_1517c
NC_006570.2	RefSeq	CDS	1570879	1571598	.	-	0	ID=cds1365;Name=YP_170449.1;Parent=gene1554;Note=Similar to Q92KR0 hypothetical transmembrane protein from Rhizobium meliloti %28266aa%29. FASTA: opt: 566 Z-score: 664.8 E%28%29: 3.5e-29 Smith-Waterman score: 566%3B 40.090 identity in 222 aa overlap. ORF ftt1517c;Dbxref=InterPro:IPR015414,UniProtKB%2FTrEMBL:Q5NEU3,Genbank:YP_170449.1,GeneID:3190872;gbkey=CDS;product=hypothetical protein;protein_id=YP_170449.1;transl_table=11
NC_006570.2	RefSeq	gene	1571628	1572200	.	+	.	ID=gene1555;Name=ogt;Dbxref=GeneID:3191050;gbkey=Gene;gene=ogt;locus_tag=FTT_1518
NC_006570.2	RefSeq	CDS	1571628	1572200	.	+	0	ID=cds1366;Name=YP_170450.1;Parent=gene1555;Note=Similar to Q8A7W3 methylated-DNA--protein-cysteine methyltransferase from Bacteroides thetaiotaomicron %28181aa%29. FASTA: opt: 443 Z-score: 536.8 bits: 106.7 E%28%29: 4.8e-22 Smith-Waterman score: 443%3B 44.375 identity in 160 aa overlap. ogt in E.coli is a bifunctional protein containing an autotranscriptional activator at its carboxy domain and a methylated-DNA--protein-cysteine methyltransferase %28MGMT%29 domain at its carboxy terminus. In Bacillus subtilis these two functions are independent and are referred to as adaA and adaB respectively;Dbxref=GOA:Q5NEU2,InterPro:IPR014048,UniProtKB%2FTrEMBL:Q5NEU2,Genbank:YP_170450.1,GeneID:3191050;gbkey=CDS;product=methylated-DNA--protein-cysteine methyltransferase;protein_id=YP_170450.1;transl_table=11
NC_006570.2	RefSeq	gene	1572292	1572639	.	+	.	ID=gene1556;Name=FTT_1519;Dbxref=GeneID:8303720;gbkey=Gene;locus_tag=FTT_1519;pseudo=true
NC_006570.2	RefSeq	gene	1572684	1574021	.	-	.	ID=gene1557;Name=gabP;Dbxref=GeneID:3191571;gbkey=Gene;gene=gabP;locus_tag=FTT_1520c
NC_006570.2	RefSeq	CDS	1572684	1574021	.	-	0	ID=cds1367;Name=YP_170451.1;Parent=gene1557;Note=Similar to Q8A4M6 glutamate%2Fgamma-aminobutyrate anti-porter from Bacteroides thetaiotaomicron. FASTA: opt: 911 Z-score: 1001.3 E%28%29: 6.4e-48 Smith-Waterman score: 911%3B 31.696identity in 448 aa overlap.;Dbxref=GOA:Q5NEU1,InterPro:IPR004841,UniProtKB%2FTrEMBL:Q5NEU1,Genbank:YP_170451.1,GeneID:3191571;gbkey=CDS;product=glutamate%2Fgamma-aminobutyrate anti-porter;protein_id=YP_170451.1;transl_table=11
NC_006570.2	RefSeq	gene	1574077	1575259	.	-	.	ID=gene1558;Name=lysA2;Dbxref=GeneID:3191795;gbkey=Gene;gene=lysA2;locus_tag=FTT_1521c;pseudo=true
NC_006570.2	RefSeq	gene	1575272	1575862	.	-	.	ID=gene1559;Name=FTT_1522c;Dbxref=GeneID:3191012;gbkey=Gene;locus_tag=FTT_1522c
NC_006570.2	RefSeq	CDS	1575272	1575862	.	-	0	ID=cds1368;Name=YP_170452.1;Parent=gene1559;Note=Similar to Q8P4A2%2C hypothetical protein XCC3808 from Xanthamonas campestris %28258aa%29. FASTA: opt:421 Z-score: 521.1 E%28%29: 3.6e-21 Smith-Waterman score: 421%3B 34.536 identity in 194 aa overlap ORF ftt1522c;Dbxref=UniProtKB%2FTrEMBL:Q5NEU0,Genbank:YP_170452.1,GeneID:3191012;gbkey=CDS;product=hypothetical protein;protein_id=YP_170452.1;transl_table=11
NC_006570.2	RefSeq	repeat_region	1576205	1576223	.	-	.	ID=id242;Note=ISFtu2 19bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	gene	1576231	1576974	.	-	.	ID=gene1560;Name=isftu2;Dbxref=GeneID:3192477;gbkey=Gene;gene=isftu2;locus_tag=FTT_1523c
NC_006570.2	RefSeq	CDS	1576231	1576974	.	-	0	ID=cds1369;Name=YP_170453.1;Parent=gene1560;Note=ISFtu2. Transposase%2C member of the IS5 family. Identical to Q8GM03  transposase from Francisella tularensis %28247 aa%29.;Dbxref=GOA:Q8GM03,InterPro:IPR002559,UniProtKB%2FTrEMBL:Q8GM03,Genbank:YP_170453.1,GeneID:3192477;gbkey=CDS;product=transposase;protein_id=YP_170453.1;transl_table=11
NC_006570.2	RefSeq	repeat_region	1577051	1577069	.	-	.	ID=id243;Note=ISFtu2 19bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	gene	1577456	1581724	.	-	.	ID=gene1561;Name=hrpA;Dbxref=GeneID:3192408;gbkey=Gene;gene=hrpA;locus_tag=FTT_1524c
NC_006570.2	RefSeq	CDS	1577456	1581724	.	-	0	ID=cds1370;Name=YP_170454.1;Parent=gene1561;Note=Similar to Q8ZE61 ATP-dependent helicase from Yersinia pestis %281280 aa%29. FASTA: opt: 2018 Z-score: 2071.8 E%28%29: 1.5e-107 Smith-Waterman score: 2974%3B 38.714 identity in 1400 aa overlap;Dbxref=GOA:Q5NET8,InterPro:IPR014021,UniProtKB%2FTrEMBL:Q5NET8,Genbank:YP_170454.1,GeneID:3192408;gbkey=CDS;product=ATp-dependent helicase;protein_id=YP_170454.1;transl_table=11
NC_006570.2	RefSeq	gene	1581748	1582635	.	-	.	ID=gene1562;Name=FTT_1525c;Dbxref=GeneID:3190818;gbkey=Gene;locus_tag=FTT_1525c
NC_006570.2	RefSeq	CDS	1581748	1582635	.	-	0	ID=cds1371;Name=YP_170455.1;Parent=gene1562;Note=ORF ftt1525c;Dbxref=GOA:Q5NET7,InterPro:IPR003856,UniProtKB%2FTrEMBL:Q5NET7,Genbank:YP_170455.1,GeneID:3190818;gbkey=CDS;product=hypothetical protein;protein_id=YP_170455.1;transl_table=11
NC_006570.2	RefSeq	gene	1582649	1584892	.	-	.	ID=gene1563;Name=idh;Dbxref=GeneID:3192248;gbkey=Gene;gene=idh;locus_tag=FTT_1526c
NC_006570.2	RefSeq	CDS	1582649	1584892	.	-	0	ID=cds1372;Name=YP_170456.1;Parent=gene1563;Note=Similar to Q8EDW2 Isocitrate dehydrogenase%2CNADP-dependent from Shewanella oneidensis %28741 aa%29. FASTA: opt: 3146 Z-score: 3332.9 E%28%29: 8.6e-178 65.574identity in 732 aa overlap;Dbxref=GOA:Q5NET6,InterPro:IPR004436,UniProtKB%2FTrEMBL:Q5NET6,Genbank:YP_170456.1,GeneID:3192248;gbkey=CDS;product=isocitrate dehydrogenase;protein_id=YP_170456.1;transl_table=11
NC_006570.2	RefSeq	gene	1584896	1585261	.	-	.	ID=gene1564;Name=arsC2;Dbxref=GeneID:3191783;gbkey=Gene;gene=arsC2;locus_tag=FTT_1527c
NC_006570.2	RefSeq	CDS	1584896	1585261	.	-	0	ID=cds1373;Name=YP_170457.1;Parent=gene1564;Note=Similar to Q87MH6 Arsenate reductase from Vibrio parahaemolyticus %28116 aa%29. FASTA: opt: 287 Z-score: 374.9 E%28%29: 5e-13 Smith-Waterman score: 287%3B 38.739 identity in 111 aa overlap;Dbxref=GOA:Q5NET5,InterPro:IPR012335,UniProtKB%2FTrEMBL:Q5NET5,Genbank:YP_170457.1,GeneID:3191783;gbkey=CDS;product=arsenate reductase;protein_id=YP_170457.1;transl_table=11
NC_006570.2	RefSeq	gene	1585477	1587165	.	+	.	ID=gene1565;Name=fadD2;Dbxref=GeneID:3191875;gbkey=Gene;gene=fadD2;locus_tag=FTT_1528
NC_006570.2	RefSeq	CDS	1585477	1587165	.	+	0	ID=cds1374;Name=YP_170458.1;Parent=gene1565;Note=Similar to Q8EE09 Long-chain-fatty-acid--CoA ligase from Shewanella oneidensis %28557 aa%29. FASTA: opt: 1556 Z-score: 1747.3 E%28%29: 1.8e-89 Smith-Waterman score: 1556%3B 42.908identity in 557 aa overlap;Dbxref=GOA:Q5NET4,InterPro:IPR000873,UniProtKB%2FTrEMBL:Q5NET4,Genbank:YP_170458.1,GeneID:3191875;gbkey=CDS;product=long chain fatty acid CoA ligase;protein_id=YP_170458.1;transl_table=11
NC_006570.2	RefSeq	gene	1587182	1589443	.	+	.	ID=gene1566;Name=fadE;Dbxref=GeneID:3191873;gbkey=Gene;gene=fadE;locus_tag=FTT_1529
NC_006570.2	RefSeq	CDS	1587182	1589443	.	+	0	ID=cds1375;Name=YP_170459.3;Parent=gene1566;Note=functions in fatty acid oxidation%3B converts acyl-CoA and FAD to FADH2 and delta2-enoyl-CoA;Dbxref=GOA:Q5NET3,InterPro:IPR015396,UniProtKB%2FTrEMBL:Q5NET3,Genbank:YP_170459.3,GeneID:3191873;gbkey=CDS;product=acyl-CoA dehydrogenase;protein_id=YP_170459.3;transl_table=11
NC_006570.2	RefSeq	gene	1589516	1592212	.	+	.	ID=gene1567;Name=fadB%2FacbP;Dbxref=GeneID:3191871;gbkey=Gene;gene=fadB%2FacbP;locus_tag=FTT_1530
NC_006570.2	RefSeq	CDS	1589516	1592212	.	+	0	ID=cds1376;Name=YP_170460.1;Parent=gene1567;Note=N-terminal %2885 aa%29 similar to CBP_YEAST %28P31787%29 Acyl-CoA-binding protein %28ACBP%29 from Saccharomyces cerevisiae %2886 aa%29. FASTA opt: 206 Z-score: 281.8 E%28%29: 7.6e-08 Smith-Waterman score: 206%3B 44.444identity in 72 aa overlap. C-terminus %28110-898%29 similar to Q8P986 3-hydroxacyl-CoA dehydrogenase from Xanthomonas campestris %28790 aa%29. FASTA: opt: 2495 Z-score: 2747.5 E%28%29: 3.5e-145 Smith-Waterman score: 2495%3B48.228 identity in 790 aa overlap No match to first 110 aa with Q8P986 or any other 3-hydroxacyl-CoA dehydrogenase. Acyl-CoA-binding protein has only been described in eukaryotes unknown EC_number 5.2.2.3;Dbxref=GOA:Q5NET2,InterPro:IPR016040,UniProtKB%2FTrEMBL:Q5NET2,Genbank:YP_170460.1,GeneID:3191871;gbkey=CDS;product=bifunctional 3-hydroxacyl-CoA dehydrogenase%2Facyl-CoA-binding protein;protein_id=YP_170460.1;transl_table=11
NC_006570.2	RefSeq	gene	1592225	1593412	.	+	.	ID=gene1568;Name=fadA;Dbxref=GeneID:3191866;gbkey=Gene;gene=fadA;locus_tag=FTT_1531
NC_006570.2	RefSeq	CDS	1592225	1593412	.	+	0	ID=cds1377;Name=YP_170461.1;Parent=gene1568;Note=Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase%2C catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation;Dbxref=GOA:Q5NET1,InterPro:IPR016038,UniProtKB%2FTrEMBL:Q5NET1,Genbank:YP_170461.1,GeneID:3191866;gbkey=CDS;product=acetyl-CoA acetyltransferase;protein_id=YP_170461.1;transl_table=11
NC_006570.2	RefSeq	gene	1593474	1593962	.	+	.	ID=gene1569;Name=FTT_1532;Dbxref=GeneID:3190857;gbkey=Gene;locus_tag=FTT_1532
NC_006570.2	RefSeq	CDS	1593474	1593962	.	+	0	ID=cds1378;Name=YP_170462.1;Parent=gene1569;Note=Similar to Q8ABB1 Conserved hypothetical protein from Bacteriodes thetaiotaomicron %28163 aa%29. FASTA: opt: 237 Z-score: 310.7 E%28%29: 1.9e-09 Smith-Waterman score: 237%3B 27.097 identity in 155 aa overlap ORF ftt1532;Dbxref=InterPro:IPR006683,UniProtKB%2FTrEMBL:Q5NET0,Genbank:YP_170462.1,GeneID:3190857;gbkey=CDS;product=hypothetical protein;protein_id=YP_170462.1;transl_table=11
NC_006570.2	RefSeq	gene	1593958	1595171	.	-	.	ID=gene1570;Name=FTT_1533c;Dbxref=GeneID:3192324;gbkey=Gene;locus_tag=FTT_1533c;pseudo=true
NC_006570.2	RefSeq	gene	1595622	1597037	.	-	.	ID=gene1571;Name=FTT_1534c;Dbxref=GeneID:3190863;gbkey=Gene;locus_tag=FTT_1534c
NC_006570.2	RefSeq	CDS	1595622	1597037	.	-	0	ID=cds1379;Name=YP_170463.1;Parent=gene1571;Note=Similar to Q8P596 Pre-B cell enhancing factor related protein from Xanthomonas campestris %28468 aa%29. FASTA: opt: 1453 Z-score: 1660.8 E%28%29: 1.2e-84 Smith-Waterman score: 1453%3B 49.260 identity in 473 aa overlap ORF ftt1534c;Dbxref=InterPro:IPR016471,UniProtKB%2FTrEMBL:Q5NES9,Genbank:YP_170463.1,GeneID:3190863;gbkey=CDS;product=nicotinate phosphoribosyltransferase;protein_id=YP_170463.1;transl_table=11
NC_006570.2	RefSeq	gene	1597111	1598051	.	-	.	ID=gene1572;Name=FTT_1535c;Dbxref=GeneID:3192300;gbkey=Gene;locus_tag=FTT_1535c;pseudo=true
NC_006570.2	RefSeq	gene	1598380	1599294	.	-	.	ID=gene1573;Name=FTT_1536c;Dbxref=GeneID:3192292;gbkey=Gene;locus_tag=FTT_1536c
NC_006570.2	RefSeq	CDS	1598380	1599294	.	-	0	ID=cds1380;Name=YP_170464.1;Parent=gene1573;Note=Similar to Q8RGP8 Hypothetical protein from Mycoplasma penetrans %28310 aa%29. FASTA: opt: 805 Z-score: 956.1 E%28%29: 2.1e-45 Smith-Waterman score: 805%3B 42.308 identity in 312 aa overlap ORF ftt1536c;Dbxref=InterPro:IPR014541,UniProtKB%2FTrEMBL:Q5NES8,Genbank:YP_170464.1,GeneID:3192292;gbkey=CDS;product=hypothetical protein;protein_id=YP_170464.1;transl_table=11
NC_006570.2	RefSeq	gene	1599434	1600828	.	-	.	ID=gene1574;Name=FTT_1537c;Dbxref=GeneID:3192317;gbkey=Gene;locus_tag=FTT_1537c
NC_006570.2	RefSeq	CDS	1599434	1600828	.	-	0	ID=cds1381;Name=YP_170465.1;Parent=gene1574;Note=Similar to Q8DAW7 Conserved hypothetical protein from Vibrio vulnificus %28448 aa%29. FASTA: opt: 455 Z-score: 511.9 E%28%29: 1.2e-20 Smith-Waterman score: 520%3B 26.539 identity in 471 aa overlap ORF ftt1537c;Dbxref=UniProtKB%2FTrEMBL:Q5NES7,Genbank:YP_170465.1,GeneID:3192317;gbkey=CDS;product=hypothetical protein;protein_id=YP_170465.1;transl_table=11
NC_006570.2	RefSeq	gene	1600834	1601817	.	-	.	ID=gene1575;Name=FTT_1538c;Dbxref=GeneID:3192498;gbkey=Gene;locus_tag=FTT_1538c
NC_006570.2	RefSeq	CDS	1600834	1601817	.	-	0	ID=cds1382;Name=YP_170466.1;Parent=gene1575;Note=ORF ftt1538c;Dbxref=UniProtKB%2FTrEMBL:Q5NES6,Genbank:YP_170466.1,GeneID:3192498;gbkey=CDS;product=hypothetical protein;protein_id=YP_170466.1;transl_table=11
NC_006570.2	RefSeq	gene	1601828	1603258	.	-	.	ID=gene1576;Name=FTT_1539c;Dbxref=GeneID:3190869;gbkey=Gene;locus_tag=FTT_1539c
NC_006570.2	RefSeq	CDS	1601828	1603258	.	-	0	ID=cds1383;Name=YP_170467.1;Parent=gene1576;Note=Similar to Q9PJ34  periplasmic protein from Campylobacter jejuni %28445 aa%29. FASTA: opt: 520 Z-score: 539.8 E%28%29: 3.2e-22 Smith-Waterman score: 530%3B 27.673 identity in 477 aa overlap ORF ftt1539c;Dbxref=UniProtKB%2FTrEMBL:Q5NES5,Genbank:YP_170467.1,GeneID:3190869;gbkey=CDS;product=hypothetical protein;protein_id=YP_170467.1;transl_table=11
NC_006570.2	RefSeq	gene	1603315	1603923	.	-	.	ID=gene1577;Name=FTT_1540c;Dbxref=GeneID:3192320;gbkey=Gene;locus_tag=FTT_1540c
NC_006570.2	RefSeq	CDS	1603315	1603923	.	-	0	ID=cds1384;Name=YP_170468.1;Parent=gene1577;Note=Similar to Q8EHZ4 Conserved hypothetical protein from Shewanella oneidensis %28197 aa%29. FASTA: opt: 542 Z-score: 654.0 E%28%29: 1.4e-28 Smith-Waterman score: 542%3B 41.584 identity in 202 aa overlap ORF ftt1540c;Dbxref=InterPro:IPR014094,UniProtKB%2FTrEMBL:Q5NES4,Genbank:YP_170468.1,GeneID:3192320;gbkey=CDS;product=hypothetical protein;protein_id=YP_170468.1;transl_table=11
NC_006570.2	RefSeq	gene	1604126	1604500	.	-	.	ID=gene1578;Name=FTT_1541c;Dbxref=GeneID:3190813;gbkey=Gene;locus_tag=FTT_1541c
NC_006570.2	RefSeq	CDS	1604126	1604500	.	-	0	ID=cds1385;Name=YP_170469.1;Parent=gene1578;Note=ORF ftt1541c;Dbxref=UniProtKB%2FTrEMBL:Q5NES3,Genbank:YP_170469.1,GeneID:3190813;gbkey=CDS;product=hypothetical protein;protein_id=YP_170469.1;transl_table=11
NC_006570.2	RefSeq	gene	1604618	1605154	.	-	.	ID=gene1579;Name=omp26;Dbxref=GeneID:3191140;gbkey=Gene;gene=omp26;locus_tag=FTT_1542c
NC_006570.2	RefSeq	CDS	1604618	1605154	.	-	0	ID=cds1386;Name=YP_170470.1;Parent=gene1579;Note=Similar to Q57483 Outer membrane protein 26 precursor %28197 aa%29. FASTA: opt: 139 Z-score: 159.9 E%28%29: 0.47 Smith-Waterman score: 139%3B 25.641 identity in 195 aa overlap;Dbxref=UniProtKB%2FTrEMBL:Q5NES2,Genbank:YP_170470.1,GeneID:3191140;gbkey=CDS;product=hypothetical protein;protein_id=YP_170470.1;transl_table=11
NC_006570.2	RefSeq	gene	1605297	1605986	.	+	.	ID=gene1580;Name=FTT_1543;Dbxref=GeneID:3190991;gbkey=Gene;locus_tag=FTT_1543
NC_006570.2	RefSeq	CDS	1605297	1605986	.	+	0	ID=cds1387;Name=YP_170471.1;Parent=gene1580;Note=Similar to Q8UGQ7 Two component response regulator from Agrobacterium tumefaciens %28252 aa%29. FASTA: opt: 684 Z-score: 819.7 E%28%29: 8.4e-38 Smith-Waterman score: 684%3B 45.333 identity in 225 aa overlap ORF ftt1543;Dbxref=GOA:Q5NES1,InterPro:IPR001867,UniProtKB%2FTrEMBL:Q5NES1,Genbank:YP_170471.1,GeneID:3190991;gbkey=CDS;product=two component response regulator;protein_id=YP_170471.1;transl_table=11
NC_006570.2	RefSeq	gene	1605964	1607003	.	+	.	ID=gene1581;Name=FTT_1544;Dbxref=GeneID:3191002;gbkey=Gene;locus_tag=FTT_1544;pseudo=true
NC_006570.2	RefSeq	gene	1607083	1608329	.	+	.	ID=gene1582;Name=FTT_1545;Dbxref=GeneID:3190979;gbkey=Gene;locus_tag=FTT_1545;pseudo=true
NC_006570.2	RefSeq	gene	1608326	1609097	.	+	.	ID=gene1583;Name=FTT_1546;Dbxref=GeneID:3190981;gbkey=Gene;locus_tag=FTT_1546;pseudo=true
NC_006570.2	RefSeq	gene	1609288	1611329	.	+	.	ID=gene1584;Name=FTT_1547;Dbxref=GeneID:3192254;gbkey=Gene;locus_tag=FTT_1547;pseudo=true
NC_006570.2	RefSeq	repeat_region	1609730	1609741	.	+	.	ID=id244;Note=ISFtu1 12bp terminal inverted repeat;Dbxref=GeneID:3192254;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	1609742	1609757	.	+	.	ID=id245;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;Dbxref=GeneID:3192254;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	1609758	1609773	.	+	.	ID=id246;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;Dbxref=GeneID:3192254;gbkey=repeat_region
NC_006570.2	RefSeq	gene	1609794	1610578	.	+	.	ID=gene1585;Name=isftu1;Dbxref=GeneID:3190830;gbkey=Gene;gene=isftu1;locus_tag=FTT_1548
NC_006570.2	RefSeq	CDS	1609794	1610120	.	+	0	ID=cds1388;Name=YP_170472.1;Parent=gene1585;Note=ISFtu1. Transposase%2C member of the IS630 Tc-1 mariner family. Identical to Q93EJ6  transposase from Francisella tularensis %28118 aa%29 from aa 144-261. Identical to Q93EJ7  transposase from Francisella tularensis %28126 aa%29 from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF%27s. ORF1 %28identical to Q93EJ7%29 contains a programmed ribosomal frameshifting motif%2C 5%27-AAAAAAAG-3%27 at aa position 109 which permits frameshifting to ORF2 %28identical to Q93EJ6%29 to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family%2C and also mariner elements%2C show that this transposase shares strongly conserved residues%2C including a fully conserved dipeptide%2CAsp-Glu %28DE%29%2C and a block consisting of a fully conserved Asp and highly conserved Glu%2C separated by 34 or 35 residues %28D35E%29. The conserved dipeptide is only present if ribosomal frameshifting occurs.;Dbxref=UniProtKB%2FTrEMBL:Q5NIH2,Genbank:YP_170472.1,GeneID:3190830;gbkey=CDS;product=transposase;protein_id=YP_170472.1;transl_table=11
NC_006570.2	RefSeq	CDS	1610120	1610578	.	+	0	ID=cds1388;Name=YP_170472.1;Parent=gene1585;Note=ISFtu1. Transposase%2C member of the IS630 Tc-1 mariner family. Identical to Q93EJ6  transposase from Francisella tularensis %28118 aa%29 from aa 144-261. Identical to Q93EJ7  transposase from Francisella tularensis %28126 aa%29 from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF%27s. ORF1 %28identical to Q93EJ7%29 contains a programmed ribosomal frameshifting motif%2C 5%27-AAAAAAAG-3%27 at aa position 109 which permits frameshifting to ORF2 %28identical to Q93EJ6%29 to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family%2C and also mariner elements%2C show that this transposase shares strongly conserved residues%2C including a fully conserved dipeptide%2CAsp-Glu %28DE%29%2C and a block consisting of a fully conserved Asp and highly conserved Glu%2C separated by 34 or 35 residues %28D35E%29. The conserved dipeptide is only present if ribosomal frameshifting occurs.;Dbxref=UniProtKB%2FTrEMBL:Q5NIH2,Genbank:YP_170472.1,GeneID:3190830;gbkey=CDS;product=transposase;protein_id=YP_170472.1;transl_table=11
NC_006570.2	RefSeq	repeat_region	1610666	1610677	.	+	.	ID=id247;Note=ISFtu1 12bp terminal inverted repeat;Dbxref=GeneID:3192254;gbkey=repeat_region
NC_006570.2	RefSeq	gene	1611289	1611744	.	+	.	ID=gene1586;Name=FTT_1549;Dbxref=GeneID:3192255;gbkey=Gene;locus_tag=FTT_1549
NC_006570.2	RefSeq	CDS	1611289	1611744	.	+	0	ID=cds1389;Name=YP_170473.1;Parent=gene1586;Note=ORF ftt1549;Dbxref=UniProtKB%2FTrEMBL:Q5NER9,Genbank:YP_170473.1,GeneID:3192255;gbkey=CDS;product=hypothetical protein;protein_id=YP_170473.1;transl_table=11
NC_006570.2	RefSeq	gene	1611838	1612380	.	+	.	ID=gene1587;Name=FTT_1550;Dbxref=GeneID:3192230;gbkey=Gene;locus_tag=FTT_1550
NC_006570.2	RefSeq	CDS	1611838	1612380	.	+	0	ID=cds1390;Name=YP_170474.1;Parent=gene1587;Note=Similar to Q8EBW9 Conserved hypothetical protein %28183 aa%29. FASTA: opt: 505 Z-score: 618.4 E%28%29: 1.4e-26 Smith-Waterman score: 505%3B 40.237identity in 169 aa overlap ORF ftt1550;Dbxref=UniProtKB%2FTrEMBL:Q5NER8,Genbank:YP_170474.1,GeneID:3192230;gbkey=CDS;product=hypothetical protein;protein_id=YP_170474.1;transl_table=11
NC_006570.2	RefSeq	gene	1612382	1613125	.	+	.	ID=gene1588;Name=FTT_1551;Dbxref=GeneID:3192231;gbkey=Gene;locus_tag=FTT_1551
NC_006570.2	RefSeq	CDS	1612382	1613125	.	+	0	ID=cds1391;Name=YP_170475.1;Parent=gene1588;Note=Similar to Q888B1 Oxidoreductase%2Cshort chain dehydrogenase from Pseudomonas syringae %28262 aa%29. FASTA: opt: 390 Z-score: 468.5 E%28%29: 3e-18 Smith-Waterman score: 445%3B 32.143 identity in 252 aa overlap ORF ftt1551;Dbxref=GOA:Q5NER7,InterPro:IPR016040,UniProtKB%2FTrEMBL:Q5NER7,Genbank:YP_170475.1,GeneID:3192231;gbkey=CDS;product=oxidoreductase;protein_id=YP_170475.1;transl_table=11
NC_006570.2	RefSeq	gene	1613139	1613966	.	+	.	ID=gene1589;Name=ole1;Dbxref=GeneID:3191051;gbkey=Gene;gene=ole1;locus_tag=FTT_1552
NC_006570.2	RefSeq	CDS	1613139	1613966	.	+	0	ID=cds1392;Name=YP_170476.1;Parent=gene1589;Note=Similar to Q8PMP8 Delta 9 acyl-lipid fatty acid desaturase from Xanthomonas axonopodis %28298 aa%29. FASTA: opt: 851 Z-score: 1027.5 E%28%29: 2.2e-49 Smith-Waterman score: 851%3B 45.149identity in 268 aa overlap;Dbxref=GOA:Q5NER6,InterPro:IPR016160,UniProtKB%2FTrEMBL:Q5NER6,Genbank:YP_170476.1,GeneID:3191051;gbkey=CDS;product=Delta 9 acyl-lipid fatty acid desaturase;protein_id=YP_170476.1;transl_table=11
NC_006570.2	RefSeq	gene	1613990	1616287	.	-	.	ID=gene1590;Name=rnr;Dbxref=GeneID:3191067;gbkey=Gene;gene=rnr;locus_tag=FTT_1553c
NC_006570.2	RefSeq	CDS	1613990	1616287	.	-	0	ID=cds1393;Name=YP_170477.1;Parent=gene1590;Note=Similar to Q8EAG7 Ribonuclease R from %28808 aa%29. FASTA: opt: 1840 Z-score: 1989.4 E%28%29: 5.9e-103 Smith-Waterman score: 1863%3B 41.602 identity in 774 aa overlap;Dbxref=GOA:Q5NER5,InterPro:IPR012340,UniProtKB%2FTrEMBL:Q5NER5,Genbank:YP_170477.1,GeneID:3191067;gbkey=CDS;product=ribonuclease R;protein_id=YP_170477.1;transl_table=11
NC_006570.2	RefSeq	gene	1616280	1617188	.	-	.	ID=gene1591;Name=truB;Dbxref=GeneID:3190994;gbkey=Gene;gene=truB;locus_tag=FTT_1554c
NC_006570.2	RefSeq	CDS	1616280	1617188	.	-	0	ID=cds1394;Name=YP_170478.1;Parent=gene1591;Note=catalyzes isomerization of specific uridines in RNA to pseudouridine%3B responsible for residues in T loops of many tRNAs;Dbxref=GOA:Q5NER4,InterPro:IPR014780,UniProtKB%2FSwiss-Prot:Q5NER4,Genbank:YP_170478.1,GeneID:3190994;gbkey=CDS;product=tRNA pseudouridine synthase B;protein_id=YP_170478.1;transl_table=11
NC_006570.2	RefSeq	gene	1617175	1617867	.	-	.	ID=gene1592;Name=rnc;Dbxref=GeneID:3191612;gbkey=Gene;gene=rnc;locus_tag=FTT_1555c
NC_006570.2	RefSeq	CDS	1617175	1617867	.	-	0	ID=cds1395;Name=YP_170479.1;Parent=gene1592;Note=cytoplasmic enzyme involved in processing rRNA and some mRNAs%3B substrates typically have dsRNA regions%3B forms a homodimer%3B have N-terminal nuclease and C-terminal RNA-binding domains%3B requires magnesium as preferred ion for activity;Dbxref=GOA:Q5NER3,InterPro:IPR014720,UniProtKB%2FSwiss-Prot:Q5NER3,Genbank:YP_170479.1,GeneID:3191612;gbkey=CDS;product=ribonuclease III;protein_id=YP_170479.1;transl_table=11
NC_006570.2	RefSeq	gene	1617874	1618737	.	-	.	ID=gene1593;Name=lepB;Dbxref=GeneID:3190721;gbkey=Gene;gene=lepB;locus_tag=FTT_1556c
NC_006570.2	RefSeq	CDS	1617874	1618737	.	-	0	ID=cds1396;Name=YP_170480.1;Parent=gene1593;Note=Similar to AAO90612 9 83CL5%29 Signal peptidase I from Coxiella burnetii %28259 aa%29. FASTA: opt: 716 Z-score: 839.6 E%28%29: 6.5e-39 Smith-Waterman score: 717%3B 39.416 identity in 274 aa overlap;Dbxref=GOA:Q5NER2,InterPro:IPR019759,UniProtKB%2FTrEMBL:Q5NER2,Genbank:YP_170480.1,GeneID:3190721;gbkey=CDS;product=signal peptidase I;protein_id=YP_170480.1;transl_table=11
NC_006570.2	RefSeq	gene	1618742	1619428	.	-	.	ID=gene1594;Name=FTT_1557c;Dbxref=GeneID:3190787;gbkey=Gene;locus_tag=FTT_1557c
NC_006570.2	RefSeq	CDS	1618742	1619428	.	-	0	ID=cds1397;Name=YP_170481.1;Parent=gene1594;Note=Similar to AAO90736 DNA-binding response regulator from Coxiella burnetii %28223 aa%29. FASTA: opt: 669 Z-score: 771.7 E%28%29: 3.9e-35 Smith-Waterman score: 669%3B 45.778 identity in 225 aa overlap ORF ftt1557c;Dbxref=GOA:Q5NER1,InterPro:IPR001867,UniProtKB%2FTrEMBL:Q5NER1,Genbank:YP_170481.1,GeneID:3190787;gbkey=CDS;product=two-component response regulator;protein_id=YP_170481.1;transl_table=11
NC_006570.2	RefSeq	gene	1619879	1620968	.	-	.	ID=gene1595;Name=FTT_1558c;Dbxref=GeneID:3192201;gbkey=Gene;locus_tag=FTT_1558c;pseudo=true
NC_006570.2	RefSeq	gene	1621205	1622029	.	-	.	ID=gene1596;Name=proC;Dbxref=GeneID:3191232;gbkey=Gene;gene=proC;locus_tag=FTT_1559c
NC_006570.2	RefSeq	CDS	1621205	1622029	.	-	0	ID=cds1398;Name=YP_170482.1;Parent=gene1596;Note=Similar to Q87LJ5 Pyrroline-5-carboxylate reductase from Vibrio parahaemolyticus %28272 aa%29. FASTA: opt: 656 Z-score: 770.0 E%28%29: 4.9e-35 Smith-Waterman score: 656%3B 39.925identity in 268 aa overlap;Dbxref=GOA:Q5NER0,InterPro:IPR016040,UniProtKB%2FTrEMBL:Q5NER0,Genbank:YP_170482.1,GeneID:3191232;gbkey=CDS;product=pyrroline-5-carboxylate reductase;protein_id=YP_170482.1;transl_table=11
NC_006570.2	RefSeq	gene	1622136	1622714	.	+	.	ID=gene1597;Name=FTT_1560;Dbxref=GeneID:3190748;gbkey=Gene;locus_tag=FTT_1560
NC_006570.2	RefSeq	CDS	1622136	1622714	.	+	0	ID=cds1399;Name=YP_170483.1;Parent=gene1597;Note=HAM1-like protein%3B Rec-dependent growth%3B RgdB%3B yggV%3B it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine;Dbxref=GOA:Q5NEQ9,InterPro:IPR002637,UniProtKB%2FSwiss-Prot:Q5NEQ9,Genbank:YP_170483.1,GeneID:3190748;gbkey=CDS;product=deoxyribonucleotide triphosphate pyrophosphatase;protein_id=YP_170483.1;transl_table=11
NC_006570.2	RefSeq	gene	1622819	1624114	.	+	.	ID=gene1598;Name=kdtA;Dbxref=GeneID:3191532;gbkey=Gene;gene=kdtA;locus_tag=FTT_1561
NC_006570.2	RefSeq	CDS	1622819	1624114	.	+	0	ID=cds1400;Name=YP_170484.1;Parent=gene1598;Note=Similar to Q87VF9 3-deoxy-D-manno-octulosonic-acid transferase from Pseudomonas syringae %28447 aa%29. FASTA: opt: 1099 Z-score: 1251.3 E%28%29: 7.6e-62 Smith-Waterman score: 1099%3B 40.143 identity in 421 aa overlap;Dbxref=GOA:Q5NEQ8,InterPro:IPR007507,UniProtKB%2FTrEMBL:Q5NEQ8,Genbank:YP_170484.1,GeneID:3191532;gbkey=CDS;product=3-deoxy-D-manno-octulosonic-acid transferase;protein_id=YP_170484.1;transl_table=11
NC_006570.2	RefSeq	gene	1624111	1624992	.	+	.	ID=gene1599;Name=ispA;Dbxref=GeneID:3192308;gbkey=Gene;gene=ispA;locus_tag=FTT_1562
NC_006570.2	RefSeq	CDS	1624111	1624992	.	+	0	ID=cds1401;Name=YP_170485.1;Parent=gene1599;Note=Similar to P45204 Geranyltranstransferase from Haemophilus influenzae %28295 aa%29. FASTA: opt: 728 Z-score: 859.4 E%28%29: 5.1e-40 Smith-Waterman score: 728%3B 43.972 identity in 282 aa overlap;Dbxref=GOA:Q5NEQ7,InterPro:IPR017446,UniProtKB%2FTrEMBL:Q5NEQ7,Genbank:YP_170485.1,GeneID:3192308;gbkey=CDS;product=geranyltranstransferase;protein_id=YP_170485.1;transl_table=11
NC_006570.2	RefSeq	gene	1625040	1625804	.	+	.	ID=gene1600;Name=pcs;Dbxref=GeneID:3191290;gbkey=Gene;gene=pcs;locus_tag=FTT_1563
NC_006570.2	RefSeq	CDS	1625040	1625804	.	+	0	ID=cds1402;Name=YP_170486.1;Parent=gene1600;Note=Similar to O51265 Phosphatidyltransferase from Borrelia burgdorferi %28234 aa%29. FASTA: opt: 438 Z-score: 531.7 E%28%29: 9.1e-22 Smith-Waterman score: 496%3B 35.743 identity in 249 aa overlap;Dbxref=GOA:Q5NEQ6,InterPro:IPR000462,UniProtKB%2FTrEMBL:Q5NEQ6,Genbank:YP_170486.1,GeneID:3191290;gbkey=CDS;product=phosphatidylcholine synthase;protein_id=YP_170486.1;transl_table=11
NC_006570.2	RefSeq	gene	1625874	1626683	.	+	.	ID=gene1601;Name=FTT_1564;Dbxref=GeneID:3190758;gbkey=Gene;locus_tag=FTT_1564
NC_006570.2	RefSeq	CDS	1625874	1626683	.	+	0	ID=cds1403;Name=YP_170487.1;Parent=gene1601;Note=Similar to Q9I6Z1 Hypothetical protein PA0141 from Pseudomonas aeruginosa %28298 aa%29. FASTA: opt: 1210 Z-score: 1427.9 E%28%29: 1.1e-71 Smith-Waterman score: 1210%3B 62.738 identity in 263 aa overlap ORF ftt1564;Dbxref=GOA:Q5NEQ5,InterPro:IPR016898,UniProtKB%2FTrEMBL:Q5NEQ5,Genbank:YP_170487.1,GeneID:3190758;gbkey=CDS;product=hypothetical protein;protein_id=YP_170487.1;transl_table=11
NC_006570.2	RefSeq	gene	1626748	1626824	.	+	.	ID=gene1602;Name=tRNA-Met %28CAT%29;Dbxref=GeneID:8303680;description=tRNA-Met %28CAT%29;gbkey=Gene;gene=tRNA-Met %28CAT%29;locus_tag=FTT_t32
NC_006570.2	RefSeq	tRNA	1626748	1626824	.	+	.	ID=rna38;Dbxref=GeneID:8303680;codons=35;gbkey=tRNA;product=tRNA-Met
NC_006570.2	RefSeq	exon	1626748	1626824	.	+	.	ID=id248;Parent=rna38;Dbxref=GeneID:8303680;codons=35;gbkey=tRNA;product=tRNA-Met
NC_006570.2	RefSeq	gene	1627057	1628189	.	-	.	ID=gene1603;Name=FTT_1565c;Dbxref=GeneID:3190729;gbkey=Gene;locus_tag=FTT_1565c;pseudo=true
NC_006570.2	RefSeq	gene	1628504	1628800	.	-	.	ID=gene1604;Name=FTT_1566c;Dbxref=GeneID:3190737;gbkey=Gene;locus_tag=FTT_1566c
NC_006570.2	RefSeq	CDS	1628504	1628800	.	-	0	ID=cds1404;Name=YP_170488.1;Parent=gene1604;Note=ORF ftt1566c;Dbxref=UniProtKB%2FTrEMBL:Q5NEQ4,Genbank:YP_170488.1,GeneID:3190737;gbkey=CDS;product=hypothetical protein;protein_id=YP_170488.1;transl_table=11
NC_006570.2	RefSeq	gene	1628971	1629558	.	-	.	ID=gene1605;Name=FTT_1567c;Dbxref=GeneID:3192158;gbkey=Gene;locus_tag=FTT_1567c
NC_006570.2	RefSeq	CDS	1628971	1629558	.	-	0	ID=cds1405;Name=YP_170489.1;Parent=gene1605;Note=ORF ftt1567c;Dbxref=UniProtKB%2FTrEMBL:Q5NEQ3,Genbank:YP_170489.1,GeneID:3192158;gbkey=CDS;product=hypothetical protein;protein_id=YP_170489.1;transl_table=11
NC_006570.2	RefSeq	gene	1629617	1630759	.	-	.	ID=gene1606;Name=lpxB;Dbxref=GeneID:3191793;gbkey=Gene;gene=lpxB;locus_tag=FTT_1568c
NC_006570.2	RefSeq	CDS	1629617	1630759	.	-	0	ID=cds1406;Name=YP_170490.1;Parent=gene1606;Note=Similar to Q87MF0 Lipid-A-disaccharide synthase from Vibrio parahaemolyticus %28379 aa%29. FASTA: 603 opt: 1010 Z-score: 1166.5 E%28%29: 4e-57 Smith-Waterman score: 1010%3B 41.207 identity in 381 aa overlap;Dbxref=GOA:Q5NEQ2,InterPro:IPR003835,UniProtKB%2FSwiss-Prot:Q5NEQ2,Genbank:YP_170490.1,GeneID:3191793;gbkey=CDS;product=lipid-A-disaccharide synthase;protein_id=YP_170490.1;transl_table=11
NC_006570.2	RefSeq	gene	1630759	1631538	.	-	.	ID=gene1607;Name=lpxA;Dbxref=GeneID:3190814;gbkey=Gene;gene=lpxA;locus_tag=FTT_1569c
NC_006570.2	RefSeq	CDS	1630759	1631538	.	-	0	ID=cds1407;Name=YP_170491.1;Parent=gene1607;Note=catalyzes the addition of %28R%29-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis;Dbxref=GOA:Q5NEQ1,InterPro:IPR018357,UniProtKB%2FTrEMBL:Q5NEQ1,Genbank:YP_170491.1,GeneID:3190814;gbkey=CDS;product=UDP-N-acetylglucosamine acyltransferase;protein_id=YP_170491.1;transl_table=11
NC_006570.2	RefSeq	gene	1631541	1632032	.	-	.	ID=gene1608;Name=fabZ;Dbxref=GeneID:3191868;gbkey=Gene;gene=fabZ;locus_tag=FTT_1570c
NC_006570.2	RefSeq	CDS	1631541	1632032	.	-	0	ID=cds1408;Name=YP_170492.1;Parent=gene1608;Note=in Pseudomonas aeruginosa this enzyme is a trimer of dimers%3B essential for membrane formation%3B performs third step of type II fatty acid biosynthesis%3B catalyzes dehydration of %283R%29-hydroxyacyl-ACP to trans-2-acyl-ACP;Dbxref=GOA:Q5NEQ0,InterPro:IPR013114,UniProtKB%2FSwiss-Prot:Q5NEQ0,Genbank:YP_170492.1,GeneID:3191868;gbkey=CDS;product=%283R%29-hydroxymyristoyl-ACP dehydratase;protein_id=YP_170492.1;transl_table=11
NC_006570.2	RefSeq	gene	1632047	1633060	.	-	.	ID=gene1609;Name=lpxD;Dbxref=GeneID:3190807;gbkey=Gene;gene=lpxD;locus_tag=FTT_1571c
NC_006570.2	RefSeq	CDS	1632047	1633060	.	-	0	ID=cds1409;Name=YP_170493.1;Parent=gene1609;Note=adds the O-linked and N-linked 3%28R%29-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis;Dbxref=GOA:Q5NEP9,InterPro:IPR007691,UniProtKB%2FSwiss-Prot:Q5NEP9,Genbank:YP_170493.1,GeneID:3190807;gbkey=CDS;product=UDP-3-O-%5B3-hydroxymyristoyl%5D glucosamine N-acyltransferase;protein_id=YP_170493.1;transl_table=11
NC_006570.2	RefSeq	gene	1633079	1633582	.	-	.	ID=gene1610;Name=ompH;Dbxref=GeneID:3191143;gbkey=Gene;gene=ompH;locus_tag=FTT_1572c
NC_006570.2	RefSeq	CDS	1633079	1633582	.	-	0	ID=cds1410;Name=YP_170494.1;Parent=gene1610;Note=Similar to OMPH_YEREN Cationic 19 kDa outer membrane protein from Yersinia enterocolitica %28169 aa%29. FASTA: opt: 245 Z-score: 251.8 E%28%29: 3.6e-06 Smith-Waterman score: 245%3B 28.000 identity in 150 aa overlap;Dbxref=GOA:Q5NEP8,InterPro:IPR005632,UniProtKB%2FTrEMBL:Q5NEP8,Genbank:YP_170494.1,GeneID:3191143;gbkey=CDS;product=outer membrane protein OmpH;protein_id=YP_170494.1;transl_table=11
NC_006570.2	RefSeq	gene	1633718	1636096	.	-	.	ID=gene1611;Name=FTT_1573c;Dbxref=GeneID:3192167;gbkey=Gene;locus_tag=FTT_1573c
NC_006570.2	RefSeq	CDS	1633718	1636096	.	-	0	ID=cds1411;Name=YP_170495.1;Parent=gene1611;Note=Similar to Q88MH2 Outer membrane protein%2Cbacterial surface antigen family from Pseudomonas putida %28786 aa%29. FASTA: opt: 1561 Z-score: 1675.2 E%28%29: 1.9e-85 Smith-Waterman score: 1561%3B 32.959 identity in 801 aa overlap ORF ftt1573c;Dbxref=GOA:Q5NEP7,InterPro:IPR016474,UniProtKB%2FTrEMBL:Q5NEP7,Genbank:YP_170495.1,GeneID:3192167;gbkey=CDS;product=hypothetical protein;protein_id=YP_170495.1;transl_table=11
NC_006570.2	RefSeq	gene	1636102	1637259	.	-	.	ID=gene1612;Name=dxr;Dbxref=GeneID:3191554;gbkey=Gene;gene=dxr;locus_tag=FTT_1574c
NC_006570.2	RefSeq	CDS	1636102	1637259	.	-	0	ID=cds1412;Name=YP_170496.1;Parent=gene1612;Note=catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate %28DXP%29 to 2-C-methyl-D-erythritol 4-phosphate;Dbxref=GOA:Q5NEP6,InterPro:IPR013644,UniProtKB%2FSwiss-Prot:Q5NEP6,Genbank:YP_170496.1,GeneID:3191554;gbkey=CDS;product=1-deoxy-D-xylulose 5-phosphate reductoisomerase;protein_id=YP_170496.1;transl_table=11
NC_006570.2	RefSeq	gene	1637265	1639871	.	-	.	ID=gene1613;Name=gyrA;Dbxref=GeneID:3191786;gbkey=Gene;gene=gyrA;locus_tag=FTT_1575c
NC_006570.2	RefSeq	CDS	1637265	1639871	.	-	0	ID=cds1413;Name=YP_170497.1;Parent=gene1613;Note=Similar to GYRA_SALTY %28P37411%29 DNA gyrase subunit A from Salmonella typhimurium %28878 aa%29. FASTA: opt: 3442 Z-score: 3640.6 E%28%29: 6.3e-195 Smith-Waterman score: 3442%3B 60.665 identity in 872 aa overlap;Dbxref=GOA:Q5NEP5,InterPro:IPR013758,UniProtKB%2FTrEMBL:Q5NEP5,Genbank:YP_170497.1,GeneID:3191786;gbkey=CDS;product=DNA gyrase subunit A;protein_id=YP_170497.1;transl_table=11
NC_006570.2	RefSeq	gene	1640130	1640675	.	+	.	ID=gene1614;Name=FTT_1576;Dbxref=GeneID:3192137;gbkey=Gene;locus_tag=FTT_1576
NC_006570.2	RefSeq	CDS	1640130	1640675	.	+	0	ID=cds1414;Name=YP_170498.1;Parent=gene1614;Note=ORF ftt1576;Dbxref=UniProtKB%2FTrEMBL:Q5NEP4,Genbank:YP_170498.1,GeneID:3192137;gbkey=CDS;product=hypothetical protein;protein_id=YP_170498.1;transl_table=11
NC_006570.2	RefSeq	gene	1640711	1641796	.	+	.	ID=gene1615;Name=FTT_1577;Dbxref=GeneID:3192144;gbkey=Gene;locus_tag=FTT_1577
NC_006570.2	RefSeq	CDS	1640711	1641796	.	+	0	ID=cds1415;Name=YP_170499.1;Parent=gene1615;Note=ORF ftt1577;Dbxref=GOA:Q5NEP3,InterPro:IPR003610,UniProtKB%2FTrEMBL:Q5NEP3,Genbank:YP_170499.1,GeneID:3192144;gbkey=CDS;product=hypothetical protein;protein_id=YP_170499.1;transl_table=11
NC_006570.2	RefSeq	gene	1641831	1642493	.	-	.	ID=gene1616;Name=ung;Dbxref=GeneID:3192316;gbkey=Gene;gene=ung;locus_tag=FTT_1578c
NC_006570.2	RefSeq	CDS	1641831	1642493	.	-	0	ID=cds1416;Name=YP_170500.1;Parent=gene1616;Note=Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine;Dbxref=GOA:Q5NEP2,InterPro:IPR018085,UniProtKB%2FSwiss-Prot:Q5NEP2,Genbank:YP_170500.1,GeneID:3192316;gbkey=CDS;product=uracil-DNA glycosylase;protein_id=YP_170500.1;transl_table=11
NC_006570.2	RefSeq	gene	1642490	1645363	.	-	.	ID=gene1617;Name=FTT_1579c;Dbxref=GeneID:3192096;gbkey=Gene;locus_tag=FTT_1579c
NC_006570.2	RefSeq	CDS	1642490	1645363	.	-	0	ID=cds1417;Name=YP_170501.1;Parent=gene1617;Note=Similar to O25314 Type III restriction enzyme R protein from Helicobacter pylori %281001 aa%29. FASTA: opt: 1491 Z-score: 1485.7 E%28%29: 6.6e-75 Smith-Waterman score: 2480%3B 42.828 identity in 990 aa overlap ORF ftt1579c;Dbxref=GOA:Q5NEP1,InterPro:IPR014021,UniProtKB%2FTrEMBL:Q5NEP1,Genbank:YP_170501.1,GeneID:3192096;gbkey=CDS;product=Type III restriction enzyme;protein_id=YP_170501.1;transl_table=11
NC_006570.2	RefSeq	gene	1645600	1646130	.	-	.	ID=gene1618;Name=FTT_1580c;Dbxref=GeneID:3192134;gbkey=Gene;locus_tag=FTT_1580c
NC_006570.2	RefSeq	CDS	1645600	1646130	.	-	0	ID=cds1418;Name=YP_170502.1;Parent=gene1618;Note=Identical to AAP83333 Hypothetical protein from Francisella tularensis ssp. tularensis strain SchuS4 %28FSC237%29 %28176 aa%29. ORF ftt1580c;Dbxref=UniProtKB%2FTrEMBL:Q7WZK9,Genbank:YP_170502.1,GeneID:3192134;gbkey=CDS;product=hypothetical protein;protein_id=YP_170502.1;transl_table=11
NC_006570.2	RefSeq	gene	1646199	1646483	.	-	.	ID=gene1619;Name=FTT_1581c;Dbxref=GeneID:3192076;gbkey=Gene;locus_tag=FTT_1581c
NC_006570.2	RefSeq	CDS	1646199	1646483	.	-	0	ID=cds1419;Name=YP_170503.1;Parent=gene1619;Note=Similar to Q8DE33 Predicted endonuclease from Vibrio vulnificus %2894 aa%29. FASTA: opt: 387 Z-score: 525.2 E%28%29: 2.1e-21 Smith-Waterman score: 387%3B 61.798identity in 89 aa overlap ORF ftt1581c;Dbxref=GOA:Q7WZK8,InterPro:IPR000305,UniProtKB%2FTrEMBL:Q7WZK8,Genbank:YP_170503.1,GeneID:3192076;gbkey=CDS;product=endonuclease;protein_id=YP_170503.1;transl_table=11
NC_006570.2	RefSeq	gene	1646491	1648143	.	-	.	ID=gene1620;Name=FTT_1582c;Dbxref=GeneID:3192085;gbkey=Gene;locus_tag=FTT_1582c;pseudo=true
NC_006570.2	RefSeq	repeat_region	1648332	1648340	.	+	.	ID=id249;Note=9 bp terminal inverse repeat;gbkey=repeat_region
NC_006570.2	RefSeq	gene	1648373	1648765	.	+	.	ID=gene1621;Name=FTT_1583;Dbxref=GeneID:8303697;gbkey=Gene;locus_tag=FTT_1583;pseudo=true
NC_006570.2	RefSeq	repeat_region	1648740	1648751	.	-	.	ID=id250;Note=ISFtu1 12bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	gene	1648839	1649623	.	-	.	ID=gene1622;Name=isftu1;Dbxref=GeneID:3190919;gbkey=Gene;gene=isftu1;locus_tag=FTT_1584c
NC_006570.2	RefSeq	CDS	1649297	1649623	.	-	0	ID=cds1420;Name=YP_170504.1;Parent=gene1622;Note=ISFtu1. Transposase%2C member of the IS630 Tc-1 mariner family. Identical to Q93EJ6  transposase from Francisella tularensis %28118 aa%29 from aa 144-261. Identical to Q93EJ7  transposase from Francisella tularensis %28126 aa%29 from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF%27s. ORF1 %28identical to Q93EJ7%29 contains a programmed ribosomal frameshifting motif%2C 5%27-AAAAAAAG-3%27 at aa position 109 which permits frameshifting to ORF2 %28identical to Q93EJ6%29 to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family%2C and also mariner elements%2C show that this transposase shares strongly conserved residues%2C including a fully conserved dipeptide%2CAsp-Glu %28DE%29%2C and a block consisting of a fully conserved Asp and highly conserved Glu%2C separated by 34 or 35 residues %28D35E%29. The conserved dipeptide is only present if ribosomal frameshifting occurs.;Dbxref=UniProtKB%2FTrEMBL:Q5NIH2,Genbank:YP_170504.1,GeneID:3190919;gbkey=CDS;product=transposase;protein_id=YP_170504.1;transl_table=11
NC_006570.2	RefSeq	CDS	1648839	1649297	.	-	0	ID=cds1420;Name=YP_170504.1;Parent=gene1622;Note=ISFtu1. Transposase%2C member of the IS630 Tc-1 mariner family. Identical to Q93EJ6  transposase from Francisella tularensis %28118 aa%29 from aa 144-261. Identical to Q93EJ7  transposase from Francisella tularensis %28126 aa%29 from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF%27s. ORF1 %28identical to Q93EJ7%29 contains a programmed ribosomal frameshifting motif%2C 5%27-AAAAAAAG-3%27 at aa position 109 which permits frameshifting to ORF2 %28identical to Q93EJ6%29 to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family%2C and also mariner elements%2C show that this transposase shares strongly conserved residues%2C including a fully conserved dipeptide%2CAsp-Glu %28DE%29%2C and a block consisting of a fully conserved Asp and highly conserved Glu%2C separated by 34 or 35 residues %28D35E%29. The conserved dipeptide is only present if ribosomal frameshifting occurs.;Dbxref=UniProtKB%2FTrEMBL:Q5NIH2,Genbank:YP_170504.1,GeneID:3190919;gbkey=CDS;product=transposase;protein_id=YP_170504.1;transl_table=11
NC_006570.2	RefSeq	repeat_region	1649644	1649659	.	-	.	ID=id251;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	1649660	1649675	.	-	.	ID=id252;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	1649676	1649691	.	-	.	ID=id253;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	1649692	1649703	.	-	.	ID=id254;Note=ISFtu1 12bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	gene	1649705	1649869	.	+	.	ID=gene1623;Name=FTT_1585;Dbxref=GeneID:3191947;gbkey=Gene;locus_tag=FTT_1585
NC_006570.2	RefSeq	CDS	1649705	1649869	.	+	0	ID=cds1421;Name=YP_170505.1;Parent=gene1623;Note=ORF ftt1585;Dbxref=UniProtKB%2FTrEMBL:Q5NEN7,Genbank:YP_170505.1,GeneID:3191947;gbkey=CDS;product=hypothetical protein;protein_id=YP_170505.1;transl_table=11
NC_006570.2	RefSeq	gene	1649883	1650164	.	-	.	ID=gene1624;Name=FTT_1586c;Dbxref=GeneID:3191930;gbkey=Gene;locus_tag=FTT_1586c
NC_006570.2	RefSeq	CDS	1649883	1650164	.	-	0	ID=cds1422;Name=YP_170506.1;Parent=gene1624;Note=ORF ftt1586c;Dbxref=UniProtKB%2FTrEMBL:Q5NEN6,Genbank:YP_170506.1,GeneID:3191930;gbkey=CDS;product=hypothetical protein;protein_id=YP_170506.1;transl_table=11
NC_006570.2	RefSeq	gene	1650177	1651679	.	-	.	ID=gene1625;Name=FTT_1587c;Dbxref=GeneID:3191942;gbkey=Gene;locus_tag=FTT_1587c;pseudo=true
NC_006570.2	RefSeq	gene	1651812	1652048	.	-	.	ID=gene1626;Name=FTT_1588c;Dbxref=GeneID:8303706;gbkey=Gene;locus_tag=FTT_1588c;pseudo=true
NC_006570.2	RefSeq	gene	1652045	1652788	.	-	.	ID=gene1627;Name=FTT_1589c;Dbxref=GeneID:3191908;gbkey=Gene;locus_tag=FTT_1589c
NC_006570.2	RefSeq	CDS	1652045	1652788	.	-	0	ID=cds1423;Name=YP_170507.1;Parent=gene1627;Note=ORF ftt1589c;Dbxref=UniProtKB%2FTrEMBL:Q5NEN5,Genbank:YP_170507.1,GeneID:3191908;gbkey=CDS;product=hypothetical protein;protein_id=YP_170507.1;transl_table=11
NC_006570.2	RefSeq	gene	1652791	1653486	.	-	.	ID=gene1628;Name=ubiG;Dbxref=GeneID:3192481;gbkey=Gene;gene=ubiG;locus_tag=FTT_1590c
NC_006570.2	RefSeq	CDS	1652791	1653486	.	-	0	ID=cds1424;Name=YP_170508.1;Parent=gene1628;Note=Involved in ubiquinone biosynthesis;Dbxref=GOA:Q5NEN4,InterPro:IPR013216,UniProtKB%2FTrEMBL:Q5NEN4,Genbank:YP_170508.1,GeneID:3192481;gbkey=CDS;product=3-demethylubiquinone-9 3-methyltransferase;protein_id=YP_170508.1;transl_table=11
NC_006570.2	RefSeq	gene	1653589	1654728	.	+	.	ID=gene1629;Name=FTT_1591;Dbxref=GeneID:3191537;gbkey=Gene;locus_tag=FTT_1591
NC_006570.2	RefSeq	CDS	1653589	1654728	.	+	0	ID=cds1425;Name=YP_170509.1;Parent=gene1629;Note=Similar to Q9Z674 Lipoprotein from Zymomonas mobilis %28256 aa%29. FASTA: opt: 352 Z-score: 404.8 E%28%29: 1.1e-14 Smith-Waterman score: 352%3B 31.739 identity in 230 aa overlap ORF ftt1591;Dbxref=GOA:Q5NEN3,InterPro:IPR007428,UniProtKB%2FTrEMBL:Q5NEN3,Genbank:YP_170509.1,GeneID:3191537;gbkey=CDS;product=lipoprotein;protein_id=YP_170509.1;transl_table=11
NC_006570.2	RefSeq	gene	1655830	1656990	.	-	.	ID=gene1630;Name=FTT_1592c;Dbxref=GeneID:3191562;gbkey=Gene;locus_tag=FTT_1592c;pseudo=true
NC_006570.2	RefSeq	gene	1657491	1658114	.	-	.	ID=gene1631;Name=FTT_1593c;Dbxref=GeneID:3191877;gbkey=Gene;locus_tag=FTT_1593c;pseudo=true
NC_006570.2	RefSeq	gene	1658651	1659643	.	+	.	ID=gene1632;Name=FTT_1594;Dbxref=GeneID:3191502;gbkey=Gene;locus_tag=FTT_1594
NC_006570.2	RefSeq	CDS	1658651	1659643	.	+	0	ID=cds1426;Name=YP_170510.1;Parent=gene1632;Note=Similar to Q8D7C4 Transcriptional regulator from Vibrio vulnificus %28301 aa%29. FASTA: opt: 364 Z-score: 428.7 E%28%29: 5e-16 Smith-Waterman score: 364%3B 33.010 identity in 206 aa overlap ORF ftt1594;Dbxref=GOA:Q5NEN2,InterPro:IPR005119,UniProtKB%2FTrEMBL:Q5NEN2,Genbank:YP_170510.1,GeneID:3191502;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=YP_170510.1;transl_table=11
NC_006570.2	RefSeq	gene	1659884	1660039	.	+	.	ID=gene1633;Name=FTT_1595;Dbxref=GeneID:3191504;gbkey=Gene;locus_tag=FTT_1595
NC_006570.2	RefSeq	CDS	1659884	1660039	.	+	0	ID=cds1427;Name=YP_170511.1;Parent=gene1633;Note=ORF ftt1595;Dbxref=UniProtKB%2FTrEMBL:Q5NEN1,Genbank:YP_170511.1,GeneID:3191504;gbkey=CDS;product=hypothetical protein;protein_id=YP_170511.1;transl_table=11
NC_006570.2	RefSeq	gene	1660212	1660610	.	+	.	ID=gene1634;Name=FTT_1596;Dbxref=GeneID:3191492;gbkey=Gene;locus_tag=FTT_1596
NC_006570.2	RefSeq	CDS	1660212	1660610	.	+	0	ID=cds1428;Name=YP_170512.1;Parent=gene1634;Note=ORF ftt1596;Dbxref=UniProtKB%2FTrEMBL:Q5NEN0,Genbank:YP_170512.1,GeneID:3191492;gbkey=CDS;product=hypothetical protein;protein_id=YP_170512.1;transl_table=11
NC_006570.2	RefSeq	gene	1660677	1662134	.	+	.	ID=gene1635;Name=FTT_1597;Dbxref=GeneID:3191501;gbkey=Gene;locus_tag=FTT_1597
NC_006570.2	RefSeq	CDS	1660677	1662134	.	+	0	ID=cds1429;Name=YP_170513.1;Parent=gene1635;Note=ORF ftt1597;Dbxref=UniProtKB%2FTrEMBL:Q5NEM9,Genbank:YP_170513.1,GeneID:3191501;gbkey=CDS;product=hypothetical protein;protein_id=YP_170513.1;transl_table=11
NC_006570.2	RefSeq	gene	1662198	1665032	.	+	.	ID=gene1636;Name=FTT_1598;Dbxref=GeneID:3191599;gbkey=Gene;locus_tag=FTT_1598
NC_006570.2	RefSeq	CDS	1662198	1665032	.	+	0	ID=cds1430;Name=YP_170514.1;Parent=gene1636;Note=This CDS is disrupted by the insertion of an ISFtu1 element occurring very near the C-terminal end. It is not clear whether this insertion affects the function of the protein. ORF ftt1598;Dbxref=UniProtKB%2FTrEMBL:Q5NEM8,Genbank:YP_170514.1,GeneID:3191599;gbkey=CDS;product=hypothetical protein;protein_id=YP_170514.1;transl_table=11
NC_006570.2	RefSeq	repeat_region	1665030	1665041	.	-	.	ID=id255;Note=ISFtu1 12bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	gene	1665129	1665913	.	-	.	ID=gene1637;Name=isftu1;Dbxref=GeneID:3191801;gbkey=Gene;gene=isftu1;locus_tag=FTT_1599c
NC_006570.2	RefSeq	CDS	1665587	1665913	.	-	0	ID=cds1431;Name=YP_170515.1;Parent=gene1637;Note=ISFtu1. Transposase%2C member of the IS630 Tc-1 mariner family. Identical to Q93EJ6  transposase from Francisella tularensis %28118 aa%29 from aa 144-261. Identical to Q93EJ7  transposase from Francisella tularensis %28126 aa%29 from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF%27s. ORF1 %28identical to Q93EJ7%29 contains a programmed ribosomal frameshifting motif%2C 5%27-AAAAAAAG-3%27 at aa position 109 which permits frameshifting to ORF2 %28identical to Q93EJ6%29 to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family%2C and also mariner elements%2C show that this transposase shares strongly conserved residues%2C including a fully conserved dipeptide%2CAsp-Glu %28DE%29%2C and a block consisting of a fully conserved Asp and highly conserved Glu%2C separated by 34 or 35 residues %28D35E%29. The conserved dipeptide is only present if ribosomal frameshifting occurs.;Dbxref=UniProtKB%2FTrEMBL:Q5NIH2,Genbank:YP_170515.1,GeneID:3191801;gbkey=CDS;product=transposase;protein_id=YP_170515.1;transl_table=11
NC_006570.2	RefSeq	CDS	1665129	1665587	.	-	0	ID=cds1431;Name=YP_170515.1;Parent=gene1637;Note=ISFtu1. Transposase%2C member of the IS630 Tc-1 mariner family. Identical to Q93EJ6  transposase from Francisella tularensis %28118 aa%29 from aa 144-261. Identical to Q93EJ7  transposase from Francisella tularensis %28126 aa%29 from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF%27s. ORF1 %28identical to Q93EJ7%29 contains a programmed ribosomal frameshifting motif%2C 5%27-AAAAAAAG-3%27 at aa position 109 which permits frameshifting to ORF2 %28identical to Q93EJ6%29 to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family%2C and also mariner elements%2C show that this transposase shares strongly conserved residues%2C including a fully conserved dipeptide%2CAsp-Glu %28DE%29%2C and a block consisting of a fully conserved Asp and highly conserved Glu%2C separated by 34 or 35 residues %28D35E%29. The conserved dipeptide is only present if ribosomal frameshifting occurs.;Dbxref=UniProtKB%2FTrEMBL:Q5NIH2,Genbank:YP_170515.1,GeneID:3191801;gbkey=CDS;product=transposase;protein_id=YP_170515.1;transl_table=11
NC_006570.2	RefSeq	repeat_region	1665934	1665949	.	-	.	ID=id256;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	1665950	1665965	.	-	.	ID=id257;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	1665966	1665977	.	-	.	ID=id258;Note=ISFtu1 12bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	gene	1666398	1667912	.	-	.	ID=gene1638;Name=fumA;Dbxref=GeneID:3191534;gbkey=Gene;gene=fumA;locus_tag=FTT_1600c
NC_006570.2	RefSeq	CDS	1666398	1667912	.	-	0	ID=cds1432;Name=YP_170516.1;Parent=gene1638;Note=Similar to Q87NJ5 Fumarate hydratase%2C class I from Vibrio parahaemolyticus %28505 aa%29. FASTA: opt: 2398 Z-score: 2635.2 E%28%29: 6.3e-139 Smith-Waterman score: 2398%3B 69.384 identity in 503 aa overlap;Dbxref=GOA:Q5NEM6,InterPro:IPR011167,UniProtKB%2FTrEMBL:Q5NEM6,Genbank:YP_170516.1,GeneID:3191534;gbkey=CDS;product=fumerate hydratase;protein_id=YP_170516.1;transl_table=11
NC_006570.2	RefSeq	gene	1668667	1670706	.	-	.	ID=gene1639;Name=recG;Dbxref=GeneID:3191638;gbkey=Gene;gene=recG;locus_tag=FTT_1601c
NC_006570.2	RefSeq	CDS	1668667	1670706	.	-	0	ID=cds1433;Name=YP_170517.1;Parent=gene1639;Note=Similar to Q88C73 ATP-dependent DNA helicase RecG from Pseudomonas putida %28692 aa%29. FASTA: opt: 1698 Z-score: 1867.5 E%28%29: 3.6e-96 Smith-Waterman score: 1698%3B 41.314 identity in 685 aa overlap;Dbxref=GOA:Q5NEM5,InterPro:IPR014021,UniProtKB%2FTrEMBL:Q5NEM5,Genbank:YP_170517.1,GeneID:3191638;gbkey=CDS;product=ATP-dependent DNA helicase RecG;protein_id=YP_170517.1;transl_table=11
NC_006570.2	RefSeq	gene	1670836	1671180	.	+	.	ID=gene1640;Name=FTT_1602;Dbxref=GeneID:3191069;gbkey=Gene;locus_tag=FTT_1602
NC_006570.2	RefSeq	CDS	1670836	1671180	.	+	0	ID=cds1434;Name=YP_170518.1;Parent=gene1640;Note=ORF ftt1602;Dbxref=UniProtKB%2FTrEMBL:Q5NEM4,Genbank:YP_170518.1,GeneID:3191069;gbkey=CDS;product=hypothetical protein;protein_id=YP_170518.1;transl_table=11
NC_006570.2	RefSeq	gene	1671314	1671550	.	+	.	ID=gene1641;Name=rpmB;Dbxref=GeneID:3191994;gbkey=Gene;gene=rpmB;locus_tag=FTT_1603
NC_006570.2	RefSeq	CDS	1671314	1671550	.	+	0	ID=cds1435;Name=YP_170519.1;Parent=gene1641;Note=required for 70S ribosome assembly;Dbxref=GOA:Q5NEM3,InterPro:IPR001383,UniProtKB%2FSwiss-Prot:Q5NEM3,Genbank:YP_170519.1,GeneID:3191994;gbkey=CDS;product=50S ribosomal protein L28;protein_id=YP_170519.1;transl_table=11
NC_006570.2	RefSeq	gene	1671577	1671732	.	+	.	ID=gene1642;Name=rpmG;Dbxref=GeneID:3191989;gbkey=Gene;gene=rpmG;locus_tag=FTT_1604
NC_006570.2	RefSeq	CDS	1671577	1671732	.	+	0	ID=cds1436;Name=YP_170520.1;Parent=gene1642;Note=in Escherichia coli BM108%2C a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function%3B there are paralogous genes in several bacterial genomes%2C and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31%3B the proteins in this group lack the CXXC motif;Dbxref=GOA:Q5NEM2,InterPro:IPR018264,UniProtKB%2FSwiss-Prot:Q5NEM2,Genbank:YP_170520.1,GeneID:3191989;gbkey=CDS;product=50S ribosomal protein L33;protein_id=YP_170520.1;transl_table=11
NC_006570.2	RefSeq	gene	1671767	1672453	.	+	.	ID=gene1643;Name=minC;Dbxref=GeneID:3192486;gbkey=Gene;gene=minC;locus_tag=FTT_1605
NC_006570.2	RefSeq	CDS	1671767	1672453	.	+	0	ID=cds1437;Name=YP_170521.1;Parent=gene1643;Note=Similar to Q87RC3 Septum site-determining protein MinC from Vibrio parahaemolyticus %28220 aa%29. FASTA: opt: 444 Z-score: 518.9 E%28%29: 4.7e-21 Smith-Waterman score: 444%3B 39.196 identity in 199 aa overlap;Dbxref=GOA:Q5NEM1,InterPro:IPR016098,UniProtKB%2FTrEMBL:Q5NEM1,Genbank:YP_170521.1,GeneID:3192486;gbkey=CDS;product=septum site-determining protein MinC;protein_id=YP_170521.1;transl_table=11
NC_006570.2	RefSeq	gene	1672493	1673317	.	+	.	ID=gene1644;Name=minD;Dbxref=GeneID:3192434;gbkey=Gene;gene=minD;locus_tag=FTT_1606
NC_006570.2	RefSeq	CDS	1672493	1673317	.	+	0	ID=cds1438;Name=YP_170522.1;Parent=gene1644;Note=Similar to Q8FWX1 Septum site-determining protein MinD from Brucella suis%28271 aa%29. FASTA: opt: 1091 Z-score: 1181.8 E%28%29: 5.6e-58 Smith-Waterman score: 1091%3B 62.825 identity in 269 aa overlap;Dbxref=GOA:Q5NEM0,InterPro:IPR010223,UniProtKB%2FTrEMBL:Q5NEM0,Genbank:YP_170522.1,GeneID:3192434;gbkey=CDS;product=septum site-determining protein MinD;protein_id=YP_170522.1;transl_table=11
NC_006570.2	RefSeq	gene	1673320	1673592	.	+	.	ID=gene1645;Name=minE;Dbxref=GeneID:3191992;gbkey=Gene;gene=minE;locus_tag=FTT_1607
NC_006570.2	RefSeq	CDS	1673320	1673592	.	+	0	ID=cds1439;Name=YP_170523.1;Parent=gene1645;Note=works in conjunction with MinC and MinD to enable cell division at the midpoint of the long axis of the cell;Dbxref=GOA:Q5NEL9,InterPro:IPR005527,UniProtKB%2FSwiss-Prot:Q5NEL9,Genbank:YP_170523.1,GeneID:3191992;gbkey=CDS;product=cell division topological specificity factor MinE;protein_id=YP_170523.1;transl_table=11
NC_006570.2	RefSeq	gene	1673606	1674409	.	+	.	ID=gene1646;Name=FTT_1608;Dbxref=GeneID:3191486;gbkey=Gene;locus_tag=FTT_1608
NC_006570.2	RefSeq	CDS	1673606	1674409	.	+	0	ID=cds1440;Name=YP_170524.1;Parent=gene1646;Note=Similar to YRBF_HAEIN Probable ABC transporter ATP-binding protein HI1087 from Haemophilus influenzae %28264 aa%29. FASTA: opt: 861 Z-score: 970.8 E%28%29: 3.2e-46 Smith-Waterman score: 861%3B 50.958identity in 261 aa overlap Equivalent to yrbF of yrb operon in E.coli ORF ftt1608;Dbxref=GOA:Q5NEL8,InterPro:IPR017871,UniProtKB%2FTrEMBL:Q5NEL8,Genbank:YP_170524.1,GeneID:3191486;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=YP_170524.1;transl_table=11
NC_006570.2	RefSeq	gene	1674413	1675177	.	+	.	ID=gene1647;Name=FTT_1609;Dbxref=GeneID:3191579;gbkey=Gene;locus_tag=FTT_1609
NC_006570.2	RefSeq	CDS	1674413	1675177	.	+	0	ID=cds1441;Name=YP_170525.1;Parent=gene1647;Note=Similar Q8VUQ9 Toluene resistance protein Trg1 from Pseudomonas putida %28265 aa%29. FASTA: opt: 793 Z-score: 934.5 E%28%29: 3.4e-44 Smith-Waterman score: 793%3B 55.869 identity in 213 aa overlap Equivalent to yrbE of yrb operon in E.coli ORF ftt1609;Dbxref=InterPro:IPR003453,UniProtKB%2FTrEMBL:Q5NEL7,Genbank:YP_170525.1,GeneID:3191579;gbkey=CDS;product=ABC transporter membrane protein;protein_id=YP_170525.1;transl_table=11
NC_006570.2	RefSeq	gene	1675177	1675710	.	+	.	ID=gene1648;Name=FTT_1610;Dbxref=GeneID:8303684;gbkey=Gene;locus_tag=FTT_1610
NC_006570.2	RefSeq	CDS	1675177	1675710	.	+	0	ID=cds1442;Name=YP_003097806.1;Parent=gene1648;Note=Similar to YRBD_HAEIN P45029 Hypothetical protein HI1085 from Haemophilus influenzae %28167 aa%29.;Dbxref=Genbank:YP_003097806.1,GeneID:8303684;gbkey=CDS;product=hypothetical protein;protein_id=YP_003097806.1;transl_table=11
NC_006570.2	RefSeq	gene	1675778	1676446	.	+	.	ID=gene1649;Name=FTT_1611;Dbxref=GeneID:3191122;gbkey=Gene;locus_tag=FTT_1611
NC_006570.2	RefSeq	CDS	1675778	1676446	.	+	0	ID=cds1443;Name=YP_170526.1;Parent=gene1649;Note=Similar to YRBC_ECOLI Protein yrbC precursor from E. coli %28211 aa%29. FASTA: opt: 230 Z-score: 278.3 E%28%29: 1.2e-07 Smith-Waterman score: 230%3B 26.147 identity in 218 aa overlap Equivalent to yrbC of yrb operon in E.coli ORF ftt1611;Dbxref=InterPro:IPR008869,UniProtKB%2FTrEMBL:Q5NEL6,Genbank:YP_170526.1,GeneID:3191122;gbkey=CDS;product=hypothetical protein;protein_id=YP_170526.1;transl_table=11
NC_006570.2	RefSeq	gene	1676446	1676739	.	+	.	ID=gene1650;Name=FTT_1612;Dbxref=GeneID:3191129;gbkey=Gene;locus_tag=FTT_1612
NC_006570.2	RefSeq	CDS	1676446	1676739	.	+	0	ID=cds1444;Name=YP_170527.1;Parent=gene1650;Note=Similar to YRBB_ECOLI Hypothetical protein yrbB from E. coli %2897 aa%29. FASTA: opt: 116 Z-score: 165.8 E%28%29: 0.22 Smith-Waterman score: 116%3B 31.915identity in 47 aa overlap Equivalent to yrbB of yrb operon in E.coli ORF ftt1612;Dbxref=InterPro:IPR002645,UniProtKB%2FTrEMBL:Q5NEL5,Genbank:YP_170527.1,GeneID:3191129;gbkey=CDS;product=hypothetical protein;protein_id=YP_170527.1;transl_table=11
NC_006570.2	RefSeq	gene	1676756	1676992	.	+	.	ID=gene1651;Name=FTT_1613;Dbxref=GeneID:3191104;gbkey=Gene;locus_tag=FTT_1613
NC_006570.2	RefSeq	CDS	1676756	1676992	.	+	0	ID=cds1445;Name=YP_170528.1;Parent=gene1651;Note=Similar to Q8ZB55 BolA-like protein from Yersinia pestis %2887 aa%29. FASTA: opt: 163 Z-score: 236.9 E%28%29: 2.4e-05 Smith-Waterman score: 163%3B 35.526 identity in 76 aa overlap Equivalent to yrbA of yrb operon in E.coli ORF ftt1613;Dbxref=InterPro:IPR002634,UniProtKB%2FTrEMBL:Q5NEL4,Genbank:YP_170528.1,GeneID:3191104;gbkey=CDS;product=BolA-like protein;protein_id=YP_170528.1;transl_table=11
NC_006570.2	RefSeq	gene	1677272	1677955	.	-	.	ID=gene1652;Name=FTT_1614c;Dbxref=GeneID:3191110;gbkey=Gene;locus_tag=FTT_1614c
NC_006570.2	RefSeq	CDS	1677272	1677955	.	-	0	ID=cds1446;Name=YP_170529.1;Parent=gene1652;Note=ORF ftt1614c;Dbxref=UniProtKB%2FTrEMBL:Q5NEL3,Genbank:YP_170529.1,GeneID:3191110;gbkey=CDS;product=hypothetical protein;protein_id=YP_170529.1;transl_table=11
NC_006570.2	RefSeq	repeat_region	1678141	1678152	.	+	.	ID=id259;Note=ISFtu1 12bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	1678153	1678168	.	+	.	ID=id260;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;gbkey=repeat_region
NC_006570.2	RefSeq	gene	1678189	1678973	.	+	.	ID=gene1653;Name=isftu1;Dbxref=GeneID:3192194;gbkey=Gene;gene=isftu1;locus_tag=FTT_1615
NC_006570.2	RefSeq	CDS	1678189	1678515	.	+	0	ID=cds1447;Name=YP_170530.1;Parent=gene1653;Note=ISFtu1. Transposase%2C member of the IS630 Tc-1 mariner family. Identical to Q93EJ6  transposase from Francisella tularensis %28118 aa%29 from aa 144-261. Identical to Q93EJ7  transposase from Francisella tularensis %28126 aa%29 from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF%27s. ORF1 %28identical to Q93EJ7%29 contains a programmed ribosomal frameshifting motif%2C 5%27-AAAAAAAG-3%27 at aa position 109 which permits frameshifting to ORF2 %28identical to Q93EJ6%29 to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family%2C and also mariner elements%2C show that this transposase shares strongly conserved residues%2C including a fully conserved dipeptide%2CAsp-Glu %28DE%29%2C and a block consisting of a fully conserved Asp and highly conserved Glu%2C separated by 34 or 35 residues %28D35E%29. The conserved dipeptide is only present if ribosomal frameshifting occurs.;Dbxref=UniProtKB%2FTrEMBL:Q5NIH2,Genbank:YP_170530.1,GeneID:3192194;gbkey=CDS;product=transposase;protein_id=YP_170530.1;transl_table=11
NC_006570.2	RefSeq	CDS	1678515	1678973	.	+	0	ID=cds1447;Name=YP_170530.1;Parent=gene1653;Note=ISFtu1. Transposase%2C member of the IS630 Tc-1 mariner family. Identical to Q93EJ6  transposase from Francisella tularensis %28118 aa%29 from aa 144-261. Identical to Q93EJ7  transposase from Francisella tularensis %28126 aa%29 from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF%27s. ORF1 %28identical to Q93EJ7%29 contains a programmed ribosomal frameshifting motif%2C 5%27-AAAAAAAG-3%27 at aa position 109 which permits frameshifting to ORF2 %28identical to Q93EJ6%29 to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family%2C and also mariner elements%2C show that this transposase shares strongly conserved residues%2C including a fully conserved dipeptide%2CAsp-Glu %28DE%29%2C and a block consisting of a fully conserved Asp and highly conserved Glu%2C separated by 34 or 35 residues %28D35E%29. The conserved dipeptide is only present if ribosomal frameshifting occurs.;Dbxref=UniProtKB%2FTrEMBL:Q5NIH2,Genbank:YP_170530.1,GeneID:3192194;gbkey=CDS;product=transposase;protein_id=YP_170530.1;transl_table=11
NC_006570.2	RefSeq	repeat_region	1679061	1679072	.	+	.	ID=id261;Note=ISFtu1 12bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	gene	1679445	1680839	.	+	.	ID=gene1654;Name=cysS;Dbxref=GeneID:3192385;gbkey=Gene;gene=cysS;locus_tag=FTT_1616
NC_006570.2	RefSeq	CDS	1679445	1680839	.	+	0	ID=cds1448;Name=YP_170531.1;Parent=gene1654;Note=catalyzes a two-step reaction%3B charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA;Dbxref=GOA:Q5NEL1,InterPro:IPR015804,UniProtKB%2FSwiss-Prot:Q5NEL1,Genbank:YP_170531.1,GeneID:3192385;gbkey=CDS;product=cysteinyl-tRNA synthetase;protein_id=YP_170531.1;transl_table=11
NC_006570.2	RefSeq	gene	1680843	1681787	.	+	.	ID=gene1655;Name=hemK;Dbxref=GeneID:3192421;gbkey=Gene;gene=hemK;locus_tag=FTT_1617
NC_006570.2	RefSeq	CDS	1680843	1681787	.	+	0	ID=cds1449;Name=YP_170532.1;Parent=gene1655;Note=involved in methylation of ribosomal protein L3;Dbxref=GOA:Q5NEL0,InterPro:IPR017127,UniProtKB%2FTrEMBL:Q5NEL0,Genbank:YP_170532.1,GeneID:3192421;gbkey=CDS;product=N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase;protein_id=YP_170532.1;transl_table=11
NC_006570.2	RefSeq	gene	1681843	1682784	.	+	.	ID=gene1656;Name=FTT_1618;Dbxref=GeneID:3191095;gbkey=Gene;locus_tag=FTT_1618;pseudo=true
NC_006570.2	RefSeq	gene	1682801	1683289	.	+	.	ID=gene1657;Name=FTT_1619;Dbxref=GeneID:8303681;gbkey=Gene;locus_tag=FTT_1619;pseudo=true
NC_006570.2	RefSeq	repeat_region	1683374	1683385	.	+	.	ID=id262;Note=ISFtu1 12bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	1683386	1683401	.	+	.	ID=id263;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	1683402	1683417	.	+	.	ID=id264;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;gbkey=repeat_region
NC_006570.2	RefSeq	gene	1683438	1684222	.	+	.	ID=gene1658;Name=isftu1;Dbxref=GeneID:3192293;gbkey=Gene;gene=isftu1;locus_tag=FTT_1620
NC_006570.2	RefSeq	CDS	1683438	1683764	.	+	0	ID=cds1450;Name=YP_170533.2;Parent=gene1658;Note=ISFtu1. Transposase%2C member of the IS630 Tc-1 mariner family. Identical to Q93EJ6  transposase from Francisella tularensis %28118 aa%29 from aa 144-261. Identical to Q93EJ7  transposase from Francisella tularensis %28126 aa%29 from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF%27s. ORF1 %28identical to Q93EJ7%29 contains a programmed ribosomal frameshifting motif%2C 5%27-AAAAAAAG-3%27 at aa position 109 which permits frameshifting to ORF2 %28identical to Q93EJ6%29 to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family%2C and also mariner elements%2C show that this transposase shares strongly conserved residues%2C including a fully conserved dipeptide%2CAsp-Glu %28DE%29%2C and a block consisting of a fully conserved Asp and highly conserved Glu%2C separated by 34 or 35 residues %28D35E%29. The conserved dipeptide is only present if ribosomal frameshifting occurs.;Dbxref=UniProtKB%2FTrEMBL:Q5NEK9,Genbank:YP_170533.2,GeneID:3192293;gbkey=CDS;product=transposase;protein_id=YP_170533.2;transl_table=11
NC_006570.2	RefSeq	CDS	1683764	1684222	.	+	0	ID=cds1450;Name=YP_170533.2;Parent=gene1658;Note=ISFtu1. Transposase%2C member of the IS630 Tc-1 mariner family. Identical to Q93EJ6  transposase from Francisella tularensis %28118 aa%29 from aa 144-261. Identical to Q93EJ7  transposase from Francisella tularensis %28126 aa%29 from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF%27s. ORF1 %28identical to Q93EJ7%29 contains a programmed ribosomal frameshifting motif%2C 5%27-AAAAAAAG-3%27 at aa position 109 which permits frameshifting to ORF2 %28identical to Q93EJ6%29 to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family%2C and also mariner elements%2C show that this transposase shares strongly conserved residues%2C including a fully conserved dipeptide%2CAsp-Glu %28DE%29%2C and a block consisting of a fully conserved Asp and highly conserved Glu%2C separated by 34 or 35 residues %28D35E%29. The conserved dipeptide is only present if ribosomal frameshifting occurs.;Dbxref=UniProtKB%2FTrEMBL:Q5NEK9,Genbank:YP_170533.2,GeneID:3192293;gbkey=CDS;product=transposase;protein_id=YP_170533.2;transl_table=11
NC_006570.2	RefSeq	repeat_region	1684310	1684321	.	+	.	ID=id265;Note=ISFtu1 12bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	gene	1684631	1685482	.	-	.	ID=gene1659;Name=FTT_1621c;Dbxref=GeneID:3192188;gbkey=Gene;locus_tag=FTT_1621c
NC_006570.2	RefSeq	CDS	1684631	1685482	.	-	0	ID=cds1451;Name=YP_170534.1;Parent=gene1659;Note=ORF ftt1621c;Dbxref=UniProtKB%2FTrEMBL:Q5NEK8,Genbank:YP_170534.1,GeneID:3192188;gbkey=CDS;product=hypothetical protein;protein_id=YP_170534.1;transl_table=11
NC_006570.2	RefSeq	gene	1685495	1686415	.	-	.	ID=gene1660;Name=FTT_1622c;Dbxref=GeneID:3192187;gbkey=Gene;locus_tag=FTT_1622c
NC_006570.2	RefSeq	CDS	1685495	1686415	.	-	0	ID=cds1452;Name=YP_170535.1;Parent=gene1660;Note=ORF ftt1622c;Dbxref=UniProtKB%2FTrEMBL:Q5NEK7,Genbank:YP_170535.1,GeneID:3192187;gbkey=CDS;product=hypothetical protein;protein_id=YP_170535.1;transl_table=11
NC_006570.2	RefSeq	gene	1686434	1686754	.	-	.	ID=gene1661;Name=FTT_1623c;Dbxref=GeneID:3192191;gbkey=Gene;locus_tag=FTT_1623c
NC_006570.2	RefSeq	CDS	1686434	1686754	.	-	0	ID=cds1453;Name=YP_170536.1;Parent=gene1661;Note=ORF ftt1623c;Dbxref=UniProtKB%2FTrEMBL:Q5NEK6,Genbank:YP_170536.1,GeneID:3192191;gbkey=CDS;product=hypothetical protein;protein_id=YP_170536.1;transl_table=11
NC_006570.2	RefSeq	gene	1686826	1687146	.	-	.	ID=gene1662;Name=FTT_1624c;Dbxref=GeneID:3192190;gbkey=Gene;locus_tag=FTT_1624c
NC_006570.2	RefSeq	CDS	1686826	1687146	.	-	0	ID=cds1454;Name=YP_170537.1;Parent=gene1662;Note=ORF ftt1624c;Dbxref=InterPro:IPR012902,UniProtKB%2FTrEMBL:Q5NEK5,Genbank:YP_170537.1,GeneID:3192190;gbkey=CDS;product=hypothetical protein;protein_id=YP_170537.1;transl_table=11
NC_006570.2	RefSeq	gene	1687246	1687836	.	-	.	ID=gene1663;Name=FTT_1625c;Dbxref=GeneID:3192193;gbkey=Gene;locus_tag=FTT_1625c
NC_006570.2	RefSeq	CDS	1687246	1687836	.	-	0	ID=cds1455;Name=YP_170538.1;Parent=gene1663;Note=ORF ftt1625c;Dbxref=UniProtKB%2FTrEMBL:Q5NEK4,Genbank:YP_170538.1,GeneID:3192193;gbkey=CDS;product=hypothetical protein;protein_id=YP_170538.1;transl_table=11
NC_006570.2	RefSeq	gene	1687847	1689253	.	-	.	ID=gene1664;Name=FTT_1626c;Dbxref=GeneID:3192192;gbkey=Gene;locus_tag=FTT_1626c
NC_006570.2	RefSeq	CDS	1687847	1689253	.	-	0	ID=cds1456;Name=YP_170539.1;Parent=gene1664;Note=ORF ftt1626c;Dbxref=UniProtKB%2FTrEMBL:Q5NEK3,Genbank:YP_170539.1,GeneID:3192192;gbkey=CDS;product=hypothetical protein;protein_id=YP_170539.1;transl_table=11
NC_006570.2	RefSeq	gene	1689250	1690053	.	-	.	ID=gene1665;Name=FTT_1627c;Dbxref=GeneID:3191084;gbkey=Gene;locus_tag=FTT_1627c
NC_006570.2	RefSeq	CDS	1689250	1690053	.	-	0	ID=cds1457;Name=YP_170540.1;Parent=gene1665;Note=ORF ftt1627c;Dbxref=InterPro:IPR012902,UniProtKB%2FTrEMBL:Q5NEK2,Genbank:YP_170540.1,GeneID:3191084;gbkey=CDS;product=hypothetical protein;protein_id=YP_170540.1;transl_table=11
NC_006570.2	RefSeq	gene	1690454	1691764	.	-	.	ID=gene1666;Name=FTT_1628c;Dbxref=GeneID:3191086;gbkey=Gene;locus_tag=FTT_1628c
NC_006570.2	RefSeq	CDS	1690454	1691764	.	-	0	ID=cds1458;Name=YP_170541.1;Parent=gene1666;Note=Similar to Q88C61  metal ion transporter from Pseudomonas putida %28446 aa%29. FASTA: opt: 1033 Z-score: 1180.6 E%28%29: 6.5e-58 Smith-Waterman score: 1035%3B 40.455 identity in 440 aa overlap ORF ftt1628c;Dbxref=InterPro:IPR002550,UniProtKB%2FTrEMBL:Q5NEK1,Genbank:YP_170541.1,GeneID:3191086;gbkey=CDS;product=metal ion transporter;protein_id=YP_170541.1;transl_table=11
NC_006570.2	RefSeq	gene	1691775	1693454	.	-	.	ID=gene1667;Name=FTT_1629c;Dbxref=GeneID:3192479;gbkey=Gene;locus_tag=FTT_1629c
NC_006570.2	RefSeq	CDS	1691775	1693454	.	-	0	ID=cds1459;Name=YP_170542.1;Parent=gene1667;Note=ORF ftt1629c;Dbxref=InterPro:IPR001173,UniProtKB%2FTrEMBL:Q5NEK0,Genbank:YP_170542.1,GeneID:3192479;gbkey=CDS;product=hypothetical protein;protein_id=YP_170542.1;transl_table=11
NC_006570.2	RefSeq	gene	1693525	1694991	.	-	.	ID=gene1668;Name=putP;Dbxref=GeneID:3191659;gbkey=Gene;gene=putP;locus_tag=FTT_1630c
NC_006570.2	RefSeq	CDS	1693525	1694991	.	-	0	ID=cds1460;Name=YP_170543.1;Parent=gene1668;Note=Similar to PUTP_ECOLI Sodium%2Fproline symporter from E. coli %28501 aa%29. FASTA: opt: 1536 Z-score: 1735.2 E%28%29: 8.4e-89 Smith-Waterman score: 1536%3B 46.531identity in 490 aa overlap;Dbxref=GOA:Q5NEJ9,InterPro:IPR018212,UniProtKB%2FTrEMBL:Q5NEJ9,Genbank:YP_170543.1,GeneID:3191659;gbkey=CDS;product=Sodium%2Fproline permease;protein_id=YP_170543.1;transl_table=11
NC_006570.2	RefSeq	gene	1695297	1696283	.	-	.	ID=gene1669;Name=glpX;Dbxref=GeneID:3192549;gbkey=Gene;gene=glpX;locus_tag=FTT_1631c
NC_006570.2	RefSeq	CDS	1695297	1696283	.	-	0	ID=cds1461;Name=YP_170544.1;Parent=gene1669;Note=type II fructose 1%2C6-bisphosphatae%3B in Escherichia coli this protein forms a dimer and binds manganese;Dbxref=GOA:Q5NEJ8,InterPro:IPR004464,UniProtKB%2FTrEMBL:Q5NEJ8,Genbank:YP_170544.1,GeneID:3192549;gbkey=CDS;product=fructose 1%2C6-bisphosphatase II;protein_id=YP_170544.1;transl_table=11
NC_006570.2	RefSeq	gene	1696303	1696941	.	-	.	ID=gene1670;Name=FTT_1632c;Dbxref=GeneID:3191085;gbkey=Gene;locus_tag=FTT_1632c
NC_006570.2	RefSeq	CDS	1696303	1696941	.	-	0	ID=cds1462;Name=YP_170545.1;Parent=gene1670;Note=Similar to AAO91263 %28Q83AV9%29 Hypothetical protein from Coxiella burnetti %28205 aa%29. FASTA: opt: 552 Z-score: 685.2 E%28%29: 2.6e-30 Smith-Waterman score: 552%3B 41.000 identity in 200 aa overlap ORF ftt1632c;Dbxref=UniProtKB%2FTrEMBL:Q5NEJ7,Genbank:YP_170545.1,GeneID:3191085;gbkey=CDS;product=hypothetical protein;protein_id=YP_170545.1;transl_table=11
NC_006570.2	RefSeq	gene	1696950	1698404	.	-	.	ID=gene1671;Name=FTT_1633c;Dbxref=GeneID:3191087;gbkey=Gene;locus_tag=FTT_1633c
NC_006570.2	RefSeq	CDS	1696950	1698404	.	-	0	ID=cds1463;Name=YP_170546.1;Parent=gene1671;Note=Similiar to AAP09999 %28Q81BU4%29 Lysine-specific permease from Bacillus cereus %28491 aa%29. FASTA: opt: 1734 Z-score: 1972.4 bits: 374.4 E%28%29: 5.2e-102 Smith-Waterman score: 1817%3B 53.459 identity in 477 aa overlap ORF ftt1633c;Dbxref=GOA:Q5NEJ6,InterPro:IPR004841,UniProtKB%2FTrEMBL:Q5NEJ6,Genbank:YP_170546.1,GeneID:3191087;gbkey=CDS;product=amino acid transporter;protein_id=YP_170546.1;transl_table=11
NC_006570.2	RefSeq	gene	1698652	1699320	.	-	.	ID=gene1672;Name=FTT_1634c;Dbxref=GeneID:3192381;gbkey=Gene;locus_tag=FTT_1634c
NC_006570.2	RefSeq	CDS	1698652	1699320	.	-	0	ID=cds1464;Name=YP_170547.1;Parent=gene1672;Note=ORF ftt1634c;Dbxref=GOA:Q5NEJ5,InterPro:IPR000326,UniProtKB%2FTrEMBL:Q5NEJ5,Genbank:YP_170547.1,GeneID:3192381;gbkey=CDS;product=hypothetical protein;protein_id=YP_170547.1;transl_table=11
NC_006570.2	RefSeq	gene	1699442	1701943	.	+	.	ID=gene1673;Name=ftsK;Dbxref=GeneID:3191691;gbkey=Gene;gene=ftsK;locus_tag=FTT_1635
NC_006570.2	RefSeq	CDS	1699442	1701943	.	+	0	ID=cds1465;Name=YP_170548.1;Parent=gene1673;Note=Similar to Q9I0M3 Cell division protein FtsK from Rickettsia prowazekii %28811 aa%29. FASTA: opt: 2030 Z-score: 2059.0 E%28%29: 7.7e-107 Smith-Waterman score: 2197%3B 45.808 identity in 823 aa overlap;Dbxref=GOA:Q5NEJ4,InterPro:IPR018541,UniProtKB%2FTrEMBL:Q5NEJ4,Genbank:YP_170548.1,GeneID:3191691;gbkey=CDS;product=cell division protein;protein_id=YP_170548.1;transl_table=11
NC_006570.2	RefSeq	gene	1701944	1702561	.	+	.	ID=gene1674;Name=lolA;Dbxref=GeneID:3190782;gbkey=Gene;gene=lolA;locus_tag=FTT_1636
NC_006570.2	RefSeq	CDS	1701944	1702561	.	+	0	ID=cds1466;Name=YP_170549.1;Parent=gene1674;Note=Similar to LOLA_PSEAE %28Q9I0M4%29 Outer-membrane lipoproteins carrier from Pseudomonas aeruginosa %28208 aa%29. FASTA: opt: 384 Z-score: 440.9 E%28%29: 1e-16 Smith-Waterman score: 384%3B 30.476 identity in 210 aa overlap;Dbxref=GOA:Q5NEJ3,InterPro:IPR018323,UniProtKB%2FSwiss-Prot:Q5NEJ3,Genbank:YP_170549.1,GeneID:3190782;gbkey=CDS;product=lipoprotein releasing system subunit A%2C outer membrane lipoproteins carrier;protein_id=YP_170549.1;transl_table=11
NC_006570.2	RefSeq	gene	1702959	1703162	.	-	.	ID=gene1675;Name=FTT_1637c;Dbxref=GeneID:3192340;gbkey=Gene;locus_tag=FTT_1637c
NC_006570.2	RefSeq	CDS	1702959	1703162	.	-	0	ID=cds1467;Name=YP_170550.1;Parent=gene1675;Note=ORF ftt1637c;Dbxref=UniProtKB%2FTrEMBL:Q5NEJ2,Genbank:YP_170550.1,GeneID:3192340;gbkey=CDS;product=hypothetical protein;protein_id=YP_170550.1;transl_table=11
NC_006570.2	RefSeq	gene	1703274	1704728	.	+	.	ID=gene1676;Name=trkH;Dbxref=GeneID:3191471;gbkey=Gene;gene=trkH;locus_tag=FTT_1638
NC_006570.2	RefSeq	CDS	1703274	1704728	.	+	0	ID=cds1468;Name=YP_170551.1;Parent=gene1676;Note=Similar to Q9KNI3 Potassium uptake protein TrkH from Vibrio cholerae %28485 aa%29. FASTA: opt: 1470 Z-score: 1682.5 E%28%29: 7.3e-86 Smith-Waterman score: 1470%3B 43.827 identity in 486 aa overlap;Dbxref=GOA:Q5NEJ1,InterPro:IPR003445,UniProtKB%2FTrEMBL:Q5NEJ1,Genbank:YP_170551.1,GeneID:3191471;gbkey=CDS;product=potassium uptake protein;protein_id=YP_170551.1;transl_table=11
NC_006570.2	RefSeq	gene	1704743	1705288	.	-	.	ID=gene1677;Name=FTT_1639c;Dbxref=GeneID:3190827;gbkey=Gene;locus_tag=FTT_1639c
NC_006570.2	RefSeq	CDS	1704743	1705288	.	-	0	ID=cds1469;Name=YP_170552.1;Parent=gene1677;Note=ORF ftt1639c;Dbxref=UniProtKB%2FTrEMBL:Q5NEJ0,Genbank:YP_170552.1,GeneID:3190827;gbkey=CDS;product=hypothetical protein;protein_id=YP_170552.1;transl_table=11
NC_006570.2	RefSeq	gene	1705314	1705922	.	-	.	ID=gene1678;Name=FTT_1640c;Dbxref=GeneID:8303709;gbkey=Gene;locus_tag=FTT_1640c;pseudo=true
NC_006570.2	RefSeq	gene	1706190	1706263	.	+	.	ID=gene1679;Name=tRNA-Met %28CAT%29;Dbxref=GeneID:8303710;description=tRNA-Met %28CAT%29;gbkey=Gene;gene=tRNA-Met %28CAT%29;locus_tag=FTT_t33
NC_006570.2	RefSeq	tRNA	1706190	1706263	.	+	.	ID=rna39;Dbxref=GeneID:8303710;codons=35;gbkey=tRNA;product=tRNA-Met
NC_006570.2	RefSeq	exon	1706190	1706263	.	+	.	ID=id266;Parent=rna39;Dbxref=GeneID:8303710;codons=35;gbkey=tRNA;product=tRNA-Met
NC_006570.2	RefSeq	gene	1706419	1706997	.	-	.	ID=gene1680;Name=hsdR2;Dbxref=GeneID:8303722;gbkey=Gene;gene=hsdR2;locus_tag=FTT_1641c;pseudo=true
NC_006570.2	RefSeq	gene	1706937	1707626	.	-	.	ID=gene1681;Name=hsdR3;Dbxref=GeneID:3192540;gbkey=Gene;gene=hsdR3;locus_tag=FTT_1642c;pseudo=true
NC_006570.2	RefSeq	repeat_region	1707628	1707639	.	+	.	ID=id267;Note=ISFtu1 12bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	1707640	1707655	.	+	.	ID=id268;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	1707656	1707671	.	+	.	ID=id269;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;gbkey=repeat_region
NC_006570.2	RefSeq	gene	1707692	1708476	.	+	.	ID=gene1682;Name=isftu1;Dbxref=GeneID:3190920;gbkey=Gene;gene=isftu1;locus_tag=FTT_1643;pseudo=true
NC_006570.2	RefSeq	repeat_region	1708564	1708575	.	+	.	ID=id270;Note=ISFtu1 12bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	gene	1708832	1710256	.	+	.	ID=gene1683;Name=FTT_1644;Dbxref=GeneID:3192336;gbkey=Gene;locus_tag=FTT_1644
NC_006570.2	RefSeq	CDS	1708832	1710256	.	+	0	ID=cds1470;Name=YP_170553.1;Parent=gene1683;Note=Similar to O86076 Sucrose hydrolase from E. coli %28477 aa%29. FASTA: opt: 787 Z-score: 912.8 E%28%29: 5.4e-43 Smith-Waterman score: 787%3B 31.929 identity in 451 aa overlap ORF ftt1644;Dbxref=GOA:Q5NEI9,InterPro:IPR013189,UniProtKB%2FTrEMBL:Q5NEI9,Genbank:YP_170553.1,GeneID:3192336;gbkey=CDS;product=Beta-fructofuranosidase;protein_id=YP_170553.1;transl_table=11
NC_006570.2	RefSeq	gene	1710275	1711507	.	+	.	ID=gene1684;Name=FTT_1645;Dbxref=GeneID:3191089;gbkey=Gene;locus_tag=FTT_1645
NC_006570.2	RefSeq	CDS	1710275	1711507	.	+	0	ID=cds1471;Name=YP_170554.1;Parent=gene1684;Note=Similar to Q8EDM5 Conserved hypothetical protein from Shewanella oneidensis %28384 aa%29. FASTA: opt: 372 Z-score: 419.7 E%28%29: 1.6e-15 Smith-Waterman score: 372%3B 23.018 identity in 391 aa overlap ORF ftt1645;Dbxref=InterPro:IPR011701,UniProtKB%2FTrEMBL:Q5NEI8,Genbank:YP_170554.1,GeneID:3191089;gbkey=CDS;product=hypothetical protein;protein_id=YP_170554.1;transl_table=11
NC_006570.2	RefSeq	gene	1711749	1712078	.	+	.	ID=gene1685;Name=dtd;Dbxref=GeneID:3191545;gbkey=Gene;gene=dtd;locus_tag=FTT_1646
NC_006570.2	RefSeq	CDS	1711749	1712078	.	+	0	ID=cds1472;Name=YP_170555.1;Parent=gene1685;Note=hydrolyzes D-tyrosyl-tRNA%28Tyr%29 into D-tyrosine and free tRNA%28Tyr%29%3B possible defense mechanism against a harmful effect of D-tyrosine;Dbxref=GOA:Q5NEI7,InterPro:IPR003732,UniProtKB%2FTrEMBL:Q5NEI7,Genbank:YP_170555.1,GeneID:3191545;gbkey=CDS;product=D-tyrosyl-tRNA%28Tyr%29 deacylase;protein_id=YP_170555.1;transl_table=11
NC_006570.2	RefSeq	gene	1712449	1713195	.	-	.	ID=gene1686;Name=pyrD;Dbxref=GeneID:3191654;gbkey=Gene;gene=pyrD;locus_tag=FTT_1647c
NC_006570.2	RefSeq	CDS	1712449	1713195	.	-	0	ID=cds1473;Name=YP_170556.1;Parent=gene1686;Note=Similar to Q9WYG8 Dihydroorotate dehydrogenase from Pyrobaculum aerophilum %28297 aa%29. FASTA: opt: 148 Z-score: 178.6 E%28%29: 0.043 Smith-Waterman score: 191%3B 26.568 identity in 271 aa overlap;Dbxref=GOA:Q5NEI6,InterPro:IPR013785,UniProtKB%2FTrEMBL:Q5NEI6,Genbank:YP_170556.1,GeneID:3191654;gbkey=CDS;product=diyroorotate dehydrogenase;protein_id=YP_170556.1;transl_table=11
NC_006570.2	RefSeq	gene	1713197	1713841	.	-	.	ID=gene1687;Name=pyrF;Dbxref=GeneID:3191652;gbkey=Gene;gene=pyrF;locus_tag=FTT_1648c
NC_006570.2	RefSeq	CDS	1713197	1713841	.	-	0	ID=cds1474;Name=YP_170557.1;Parent=gene1687;Note=Similar to PYRF_STAAM %28Q9LCT0%29 Orotidine 5%27-phosphate decarboxylase from Bradyrhizobium japonicum %28237 aa%29. FASTA: opt: 228 z-score: 280.6 E%28%29: 8.8e-08 Smith-Waterman score: 243%3B 28.061identity in 196 aa overlap;Dbxref=GOA:Q5NEI5,InterPro:IPR018089,UniProtKB%2FTrEMBL:Q5NEI5,Genbank:YP_170557.1,GeneID:3191652;gbkey=CDS;product=orotidine 5%27-phosphate decarboxylase;protein_id=YP_170557.1;transl_table=11
NC_006570.2	RefSeq	gene	1714108	1717491	.	+	.	ID=gene1688;Name=FTT_1649;Dbxref=GeneID:3192342;gbkey=Gene;locus_tag=FTT_1649;pseudo=true
NC_006570.2	RefSeq	gene	1717533	1718081	.	-	.	ID=gene1689;Name=FTT_1650c;Dbxref=GeneID:3190851;gbkey=Gene;locus_tag=FTT_1650c
NC_006570.2	RefSeq	CDS	1717533	1718081	.	-	0	ID=cds1475;Name=YP_170558.1;Parent=gene1689;Note=Similar to Q93LJ4 Periplasmic monofunctional chorismate mutase from Salmonella typhimurium %28181 aa%29. FASTA: opt: 186 Z-score: 223.0 E%28%29: 0.00014 Smith-Waterman score: 186%3B 31.746 identity in 126 aa overlap ORF ftt1650;Dbxref=GOA:Q5NEI4,InterPro:IPR002701,UniProtKB%2FTrEMBL:Q5NEI4,Genbank:YP_170558.1,GeneID:3190851;gbkey=CDS;product=chorismate mutase;protein_id=YP_170558.1;transl_table=11
NC_006570.2	RefSeq	gene	1718233	1718859	.	+	.	ID=gene1690;Name=FTT_1651;Dbxref=GeneID:3192480;gbkey=Gene;locus_tag=FTT_1651
NC_006570.2	RefSeq	CDS	1718233	1718859	.	+	0	ID=cds1476;Name=YP_170559.1;Parent=gene1690;Note=Similar to Q8KDD5 Hypothetical protein from Chlorobium tepidum %28215 aa%29. FASTA: opt: 569 z-score: 706.8 E%28%29: 1.6e-31 Smith-Waterman score: 569%3B 40.580 identity in 207 aa overlap ORF ftt1651;Dbxref=InterPro:IPR006917,UniProtKB%2FTrEMBL:Q5NEI3,Genbank:YP_170559.1,GeneID:3192480;gbkey=CDS;product=hypothetical protein;protein_id=YP_170559.1;transl_table=11
NC_006570.2	RefSeq	gene	1718860	1719729	.	-	.	ID=gene1691;Name=FTT_1652c;Dbxref=GeneID:3190850;gbkey=Gene;locus_tag=FTT_1652c
NC_006570.2	RefSeq	CDS	1718860	1719729	.	-	0	ID=cds1477;Name=YP_170560.1;Parent=gene1691;Note=Similar to Q8EFC8 Transcriptional regulator%2C LysR family from Shewanella oneidensis %28291 aa%29. FASTA: opt: 443 Z-score: 527.9 E%28%29: 1.5e-21 Smith-Waterman score: 443%3B 29.831 identity in 295 aa overlap ORF ftt1652c;Dbxref=GOA:Q5NEI2,InterPro:IPR011991,UniProtKB%2FTrEMBL:Q5NEI2,Genbank:YP_170560.1,GeneID:3190850;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=YP_170560.1;transl_table=11
NC_006570.2	RefSeq	gene	1719855	1720262	.	+	.	ID=gene1692;Name=FTT_1653;Dbxref=GeneID:3190846;gbkey=Gene;locus_tag=FTT_1653
NC_006570.2	RefSeq	CDS	1719855	1720262	.	+	0	ID=cds1478;Name=YP_170561.1;Parent=gene1692;Note=ORF ftt1653;Dbxref=UniProtKB%2FTrEMBL:Q5NEI1,Genbank:YP_170561.1,GeneID:3190846;gbkey=CDS;product=hypothetical protein;protein_id=YP_170561.1;transl_table=11
NC_006570.2	RefSeq	gene	1720351	1721316	.	+	.	ID=gene1693;Name=emrA2;Dbxref=GeneID:3191565;gbkey=Gene;gene=emrA2;locus_tag=FTT_1654
NC_006570.2	RefSeq	CDS	1720351	1721316	.	+	0	ID=cds1479;Name=YP_170562.1;Parent=gene1693;Note=Similar to AAO90332 %28Q83DE0%29 Multidrug resistance protein from Coxiella burnetii %28331 aa%29. FASTA: opt: 406 z-score: 447.9 E%28%29: 4.2e-17 Smith-Waterman score: 406%3B 28.135 identity in 327 aa overlap;Dbxref=GOA:Q5NEI0,InterPro:IPR006143,UniProtKB%2FTrEMBL:Q5NEI0,Genbank:YP_170562.1,GeneID:3191565;gbkey=CDS;product=HlyD family secretion protein;protein_id=YP_170562.1;transl_table=11
NC_006570.2	RefSeq	gene	1721291	1722355	.	+	.	ID=gene1694;Name=FTT_1655;Dbxref=GeneID:3190881;gbkey=Gene;locus_tag=FTT_1655
NC_006570.2	RefSeq	CDS	1721291	1722355	.	+	0	ID=cds1480;Name=YP_170563.1;Parent=gene1694;Note=ORF ftt1655;Dbxref=UniProtKB%2FTrEMBL:Q5NEH9,Genbank:YP_170563.1,GeneID:3190881;gbkey=CDS;product=hypothetical protein;protein_id=YP_170563.1;transl_table=11
NC_006570.2	RefSeq	gene	1722471	1723022	.	-	.	ID=gene1695;Name=FTT_1656c;Dbxref=GeneID:3190837;gbkey=Gene;locus_tag=FTT_1656c
NC_006570.2	RefSeq	CDS	1722471	1723022	.	-	0	ID=cds1481;Name=YP_170564.1;Parent=gene1695;Note=Similiar to Q8PGE2 Hypothetical protein from Xanthomonas axonopodis%28186 aa%29. FASTA: opt: 578 Z-score: 703.0 E%28%29: 2.6e-31 Smith-Waterman score: 578%3B 51.462 identity in 171 aa overlap ORF ftt1656c;Dbxref=InterPro:IPR009858,UniProtKB%2FTrEMBL:Q5NEH8,Genbank:YP_170564.1,GeneID:3190837;gbkey=CDS;product=hypothetical protein;protein_id=YP_170564.1;transl_table=11
NC_006570.2	RefSeq	gene	1723486	1723689	.	-	.	ID=gene1696;Name=FTT_1657c;Dbxref=GeneID:3192476;gbkey=Gene;locus_tag=FTT_1657c
NC_006570.2	RefSeq	CDS	1723486	1723689	.	-	0	ID=cds1482;Name=YP_170565.1;Parent=gene1696;Note=ORF ftt1657c;Dbxref=UniProtKB%2FTrEMBL:Q5NEH7,Genbank:YP_170565.1,GeneID:3192476;gbkey=CDS;product=hypothetical protein;protein_id=YP_170565.1;transl_table=11
NC_006570.2	RefSeq	gene	1723736	1723990	.	-	.	ID=gene1697;Name=FTT_1658c;Dbxref=GeneID:3190815;gbkey=Gene;locus_tag=FTT_1658c
NC_006570.2	RefSeq	CDS	1723736	1723990	.	-	0	ID=cds1483;Name=YP_170566.1;Parent=gene1697;Note=Similar to BAC68773 %28Q82P70%29 Hypothetical protein from Streptomyces avermitilis %2895 aa%29. FASTA: opt: 135 Z-score: 188.6 E%28%29: 0.012 Smith-Waterman score: 135%3B 25.316 identity in 79 aa overlap ORF ftt1658c;Dbxref=UniProtKB%2FTrEMBL:Q5NEH6,Genbank:YP_170566.1,GeneID:3190815;gbkey=CDS;product=hypothetical protein;protein_id=YP_170566.1;transl_table=11
NC_006570.2	RefSeq	gene	1724243	1725268	.	+	.	ID=gene1698;Name=FTT_1659;Dbxref=GeneID:3190833;gbkey=Gene;locus_tag=FTT_1659
NC_006570.2	RefSeq	CDS	1724243	1725268	.	+	0	ID=cds1484;Name=YP_170567.1;Parent=gene1698;Note=ORF ftt1659;Dbxref=GOA:Q5NEH5,UniProtKB%2FTrEMBL:Q5NEH5,Genbank:YP_170567.1,GeneID:3190833;gbkey=CDS;product=hypothetical protein;protein_id=YP_170567.1;transl_table=11
NC_006570.2	RefSeq	gene	1725296	1726642	.	-	.	ID=gene1699;Name=pyrC;Dbxref=GeneID:3191655;gbkey=Gene;gene=pyrC;locus_tag=FTT_1660c
NC_006570.2	RefSeq	CDS	1725296	1726642	.	-	0	ID=cds1485;Name=YP_170568.1;Parent=gene1699;Note=Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides;Dbxref=GOA:Q5NEH4,InterPro:IPR006680,UniProtKB%2FTrEMBL:Q5NEH4,Genbank:YP_170568.1,GeneID:3191655;gbkey=CDS;product=dihydroorotase;protein_id=YP_170568.1;transl_table=11
NC_006570.2	RefSeq	gene	1726774	1727454	.	+	.	ID=gene1700;Name=tmpT;Dbxref=GeneID:3190790;gbkey=Gene;gene=tmpT;locus_tag=FTT_1661
NC_006570.2	RefSeq	CDS	1726774	1727454	.	+	0	ID=cds1486;Name=YP_170569.1;Parent=gene1700;Note=catalyzes the S-adenosylmethionine-dependent transmethylation of thiopurine compounds%3B may be involved in selenium cycling by forming dimethylselenide and%2For dimethyldiselenide;Dbxref=GOA:Q5NEH3,InterPro:IPR016822,UniProtKB%2FSwiss-Prot:Q5NEH3,Genbank:YP_170569.1,GeneID:3190790;gbkey=CDS;product=thiopurine S-methyltransferase;protein_id=YP_170569.1;transl_table=11
NC_006570.2	RefSeq	gene	1727618	1728633	.	-	.	ID=gene1701;Name=FTT_1662c;Dbxref=GeneID:3192372;gbkey=Gene;locus_tag=FTT_1662c;pseudo=true
NC_006570.2	RefSeq	gene	1729048	1730214	.	+	.	ID=gene1702;Name=carA;Dbxref=GeneID:3191074;gbkey=Gene;gene=carA;locus_tag=FTT_1663
NC_006570.2	RefSeq	CDS	1729048	1730214	.	+	0	ID=cds1487;Name=YP_170570.1;Parent=gene1702;Note=catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways%3B forms an octamer composed of four CarAB dimers;Dbxref=GOA:Q5NEH2,InterPro:IPR017926,UniProtKB%2FTrEMBL:Q5NEH2,Genbank:YP_170570.1,GeneID:3191074;gbkey=CDS;product=carbamoyl phosphate synthase small subunit;protein_id=YP_170570.1;transl_table=11
NC_006570.2	RefSeq	gene	1730219	1733503	.	+	.	ID=gene1703;Name=carB;Dbxref=GeneID:3191275;gbkey=Gene;gene=carB;locus_tag=FTT_1664
NC_006570.2	RefSeq	CDS	1730219	1733503	.	+	0	ID=cds1488;Name=YP_170571.1;Parent=gene1703;Note=four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate%3B CarB is responsible for the amidotransferase activity;Dbxref=GOA:Q5NEH1,InterPro:IPR013817,UniProtKB%2FTrEMBL:Q5NEH1,Genbank:YP_170571.1,GeneID:3191275;gbkey=CDS;product=carbamoyl phosphate synthase large subunit;protein_id=YP_170571.1;transl_table=11
NC_006570.2	RefSeq	gene	1733645	1734565	.	+	.	ID=gene1704;Name=pyrB;Dbxref=GeneID:3191656;gbkey=Gene;gene=pyrB;locus_tag=FTT_1665
NC_006570.2	RefSeq	CDS	1733645	1734565	.	+	0	ID=cds1489;Name=YP_170572.1;Parent=gene1704;Note=Similar to PYRB_METJA Aspartate carbamoyltransferase from Methanococcus jannaschii %28306 aa%29. FASTA: opt: 943 Z-score: 1081.5 E%28%29: 2.2e-52 Smith-Waterman score: 943%3B 49.338 identity in 302 aa overlap;Dbxref=GOA:Q5NEH0,InterPro:IPR006132,UniProtKB%2FTrEMBL:Q5NEH0,Genbank:YP_170572.1,GeneID:3191656;gbkey=CDS;product=aspartate carbamoyltransferase;protein_id=YP_170572.1;transl_table=11
NC_006570.2	RefSeq	gene	1734578	1735465	.	-	.	ID=gene1705;Name=FTT_1666c;Dbxref=GeneID:3192365;gbkey=Gene;locus_tag=FTT_1666c
NC_006570.2	RefSeq	CDS	1734578	1735465	.	-	0	ID=cds1490;Name=YP_170573.1;Parent=gene1705;Note=Similar to AAP10961 %28Q819E3%29 3-hydroxyisobutyrate dehydrogenase from Bacillus cereus %28292 aa%29. FASTA: opt: 384 z-score: 452.2 E%28%29: 2.4e-17 Smith-Waterman score: 384%3B 24.483 identity in 290 aa overlap ORF ftt1666c;Dbxref=GOA:Q5NEG9,InterPro:IPR016040,UniProtKB%2FTrEMBL:Q5NEG9,Genbank:YP_170573.1,GeneID:3192365;gbkey=CDS;product=3-hydroxyisobutyrate dehydrogenase;protein_id=YP_170573.1;transl_table=11
NC_006570.2	RefSeq	gene	1735953	1736189	.	+	.	ID=gene1706;Name=FTT_1667;Dbxref=GeneID:3191894;gbkey=Gene;locus_tag=FTT_1667
NC_006570.2	RefSeq	CDS	1735953	1736189	.	+	0	ID=cds1491;Name=YP_170574.1;Parent=gene1706;Note=ORF ftt1667;Dbxref=InterPro:IPR013097,UniProtKB%2FTrEMBL:Q5NEG8,Genbank:YP_170574.1,GeneID:3191894;gbkey=CDS;product=hypothetical protein;protein_id=YP_170574.1;transl_table=11
NC_006570.2	RefSeq	gene	1736516	1737739	.	+	.	ID=gene1707;Name=sdaC2;Dbxref=GeneID:3191410;gbkey=Gene;gene=sdaC2;locus_tag=FTT_1668
NC_006570.2	RefSeq	CDS	1736516	1737739	.	+	0	ID=cds1492;Name=YP_170575.1;Parent=gene1707;Note=Similar to Q8ZGH6 Serine transporter from Yersinia pestis %28433 aa%29. FASTA: opt: 1336 Z-score: 1510.1 E%28%29: 2.9e-76 Smith-Waterman score: 1336%3B 46.078identity in 408 aa overlap.;Dbxref=InterPro:IPR018227,UniProtKB%2FTrEMBL:Q5NEG7,Genbank:YP_170575.1,GeneID:3191410;gbkey=CDS;product=serine transporter;protein_id=YP_170575.1;transl_table=11
NC_006570.2	RefSeq	repeat_region	1738659	1738670	.	+	.	ID=id271;Note=ISFtu1 12bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	1738671	1738686	.	+	.	ID=id272;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	1738687	1738702	.	+	.	ID=id273;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;gbkey=repeat_region
NC_006570.2	RefSeq	gene	1738723	1739507	.	+	.	ID=gene1708;Name=isftu1;Dbxref=GeneID:3190921;gbkey=Gene;gene=isftu1;locus_tag=FTT_1669
NC_006570.2	RefSeq	CDS	1738723	1739049	.	+	0	ID=cds1493;Name=YP_170576.1;Parent=gene1708;Note=ISFtu1. Transposase%2C member of the IS630 Tc-1 mariner family. Identical to Q93EJ6  transposase from Francisella tularensis %28118 aa%29 from aa 144-261. Identical to Q93EJ7  transposase from Francisella tularensis %28126 aa%29 from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF%27s. ORF1 %28identical to Q93EJ7%29 contains a programmed ribosomal frameshifting motif%2C 5%27-AAAAAAAG-3%27 at aa position 109 which permits frameshifting to ORF2 %28identical to Q93EJ6%29 to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family%2C and also mariner elements%2C show that this transposase shares strongly conserved residues%2C including a fully conserved dipeptide%2CAsp-Glu %28DE%29%2C and a block consisting of a fully conserved Asp and highly conserved Glu%2C separated by 34 or 35 residues %28D35E%29. The conserved dipeptide is only present if ribosomal frameshifting occurs.;Dbxref=UniProtKB%2FTrEMBL:Q5NEG6,Genbank:YP_170576.1,GeneID:3190921;gbkey=CDS;product=transposase;protein_id=YP_170576.1;transl_table=11
NC_006570.2	RefSeq	CDS	1739049	1739507	.	+	0	ID=cds1493;Name=YP_170576.1;Parent=gene1708;Note=ISFtu1. Transposase%2C member of the IS630 Tc-1 mariner family. Identical to Q93EJ6  transposase from Francisella tularensis %28118 aa%29 from aa 144-261. Identical to Q93EJ7  transposase from Francisella tularensis %28126 aa%29 from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF%27s. ORF1 %28identical to Q93EJ7%29 contains a programmed ribosomal frameshifting motif%2C 5%27-AAAAAAAG-3%27 at aa position 109 which permits frameshifting to ORF2 %28identical to Q93EJ6%29 to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family%2C and also mariner elements%2C show that this transposase shares strongly conserved residues%2C including a fully conserved dipeptide%2CAsp-Glu %28DE%29%2C and a block consisting of a fully conserved Asp and highly conserved Glu%2C separated by 34 or 35 residues %28D35E%29. The conserved dipeptide is only present if ribosomal frameshifting occurs.;Dbxref=UniProtKB%2FTrEMBL:Q5NEG6,Genbank:YP_170576.1,GeneID:3190921;gbkey=CDS;product=transposase;protein_id=YP_170576.1;transl_table=11
NC_006570.2	RefSeq	gene	1739584	1740195	.	-	.	ID=gene1709;Name=napH;Dbxref=GeneID:8303693;gbkey=Gene;gene=napH;locus_tag=FTT_1670c;pseudo=true
NC_006570.2	RefSeq	repeat_region	1739595	1739606	.	+	.	ID=id274;Note=ISFtu1 12bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	gene	1740586	1741653	.	+	.	ID=gene1710;Name=ribD;Dbxref=GeneID:3191624;gbkey=Gene;gene=ribD;locus_tag=FTT_1671
NC_006570.2	RefSeq	CDS	1740586	1741653	.	+	0	ID=cds1494;Name=YP_170577.1;Parent=gene1710;Note=Similar to RIBD_AQUAE Riboflavin biosynthesis protein ribD from Aquiflex aeolicus %28356 aa%29. FASTA: opt: 915 z-score: 1060.1 E%28%29: 3.4e-51 Smith-Waterman score: 916%3B 43.824 identity in 340 aa overlap;Dbxref=GOA:Q5NEG5,InterPro:IPR016192,UniProtKB%2FTrEMBL:Q5NEG5,Genbank:YP_170577.1,GeneID:3191624;gbkey=CDS;product=riboflavin biosynthesis protein ribD;protein_id=YP_170577.1;transl_table=11
NC_006570.2	RefSeq	gene	1741646	1742251	.	+	.	ID=gene1711;Name=ribB;Dbxref=GeneID:3191625;gbkey=Gene;gene=ribB;locus_tag=FTT_1672
NC_006570.2	RefSeq	CDS	1741646	1742251	.	+	0	ID=cds1495;Name=YP_170578.1;Parent=gene1711;Note=catalyzes the formation of riboflavin from 6%2C7-dimethyl-8-%281-D-ribityl%29lumazine;Dbxref=GOA:Q5NEG4,InterPro:IPR001783,UniProtKB%2FTrEMBL:Q5NEG4,Genbank:YP_170578.1,GeneID:3191625;gbkey=CDS;product=riboflavin synthase subunit alpha;protein_id=YP_170578.1;transl_table=11
NC_006570.2	RefSeq	gene	1742244	1743455	.	+	.	ID=gene1712;Name=ribA;Dbxref=GeneID:3191626;gbkey=Gene;gene=ribA;locus_tag=FTT_1673
NC_006570.2	RefSeq	CDS	1742244	1743455	.	+	0	ID=cds1496;Name=YP_170579.1;Parent=gene1712;Note=Similar to GCH2_AQUAE Riboflavin biosynthesis protein ribA from Aquiflex aeolicus %28406 aa%29. FASTA: opt: 1135 z-score: 1316.5 E%28%29: 1.8e-65 Smith-Waterman score: 1135%3B 46.305 identity in 406 aa overlap;Dbxref=GOA:Q5NEG3,InterPro:IPR017945,UniProtKB%2FTrEMBL:Q5NEG3,Genbank:YP_170579.1,GeneID:3191626;gbkey=CDS;product=riboflavin biosynthesis protein ribA%2FGTP-cyclohydrolase II;protein_id=YP_170579.1;transl_table=11
NC_006570.2	RefSeq	gene	1743465	1743908	.	+	.	ID=gene1713;Name=ribH;Dbxref=GeneID:3191622;gbkey=Gene;gene=ribH;locus_tag=FTT_1674
NC_006570.2	RefSeq	CDS	1743465	1743908	.	+	0	ID=cds1497;Name=YP_170580.1;Parent=gene1713;Note=Similar to AAO90192 %28Q83DP8%29 Riboflavin synthase%2C beta subunit from Coxiella burnetii %28151 aa%29. FASTA: opt: 496 z-score: 645.4 E%28%29: 4.2e-28 Smith-Waterman score: 496%3B 53.571 identity in 140 aa overlap;Dbxref=GOA:Q5NEG2,InterPro:IPR002180,UniProtKB%2FTrEMBL:Q5NEG2,Genbank:YP_170580.1,GeneID:3191622;gbkey=CDS;product=riboflavin synthase beta subunit %286%2C7-dimethl-8-ribityllumazine synthase%29;protein_id=YP_170580.1;transl_table=11
NC_006570.2	RefSeq	gene	1743905	1744429	.	+	.	ID=gene1714;Name=def2;Dbxref=GeneID:3191511;gbkey=Gene;gene=def2;locus_tag=FTT_1675
NC_006570.2	RefSeq	CDS	1743905	1744429	.	+	0	ID=cds1498;Name=YP_170581.1;Parent=gene1714;Note=Similar to DEF_NEIMA %28Q9JQN0%29 Peptide deformylase from Neisseria meningitidis %28167 aa%29. FASTA: opt: 465 z-score: 571.7 E%28%29: 5.4e-24 Smith-Waterman score: 465%3B 46.914 identity in 162 aa overlap;Dbxref=GOA:Q5NEG1,InterPro:IPR000181,UniProtKB%2FTrEMBL:Q5NEG1,Genbank:YP_170581.1,GeneID:3191511;gbkey=CDS;product=peptide deformylase;protein_id=YP_170581.1;transl_table=11
NC_006570.2	RefSeq	gene	1744511	1745503	.	+	.	ID=gene1715;Name=FTT_1676;Dbxref=GeneID:3192368;gbkey=Gene;locus_tag=FTT_1676
NC_006570.2	RefSeq	CDS	1744511	1745503	.	+	0	ID=cds1499;Name=YP_170582.1;Parent=gene1715;Note=ORF ftt1676;Dbxref=UniProtKB%2FTrEMBL:Q5NEG0,Genbank:YP_170582.1,GeneID:3192368;gbkey=CDS;product=hypothetical protein;protein_id=YP_170582.1;transl_table=11
NC_006570.2	RefSeq	gene	1745523	1746668	.	-	.	ID=gene1716;Name=mnmA;Dbxref=GeneID:3191949;gbkey=Gene;gene=mnmA;locus_tag=FTT_1677c
NC_006570.2	RefSeq	CDS	1745523	1746668	.	-	0	ID=cds1500;Name=YP_170583.1;Parent=gene1716;Note=catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs;Dbxref=GOA:Q5NEF9,InterPro:IPR018318,UniProtKB%2FSwiss-Prot:Q5NEF9,Genbank:YP_170583.1,GeneID:3191949;gbkey=CDS;product=tRNA-specific 2-thiouridylase MnmA;protein_id=YP_170583.1;transl_table=11
NC_006570.2	RefSeq	gene	1746616	1748400	.	-	.	ID=gene1717;Name=lepA;Dbxref=GeneID:3192146;gbkey=Gene;gene=lepA;locus_tag=FTT_1678c
NC_006570.2	RefSeq	CDS	1746616	1748400	.	-	0	ID=cds1501;Name=YP_170584.1;Parent=gene1717;Note=binds to the ribosome on the universally-conserved alpha-sarcin loop;Dbxref=GOA:Q5NEF8,InterPro:IPR013842,UniProtKB%2FSwiss-Prot:Q5NEF8,Genbank:YP_170584.1,GeneID:3192146;gbkey=CDS;product=GTP-binding protein LepA;protein_id=YP_170584.1;transl_table=11
NC_006570.2	RefSeq	gene	1748670	1748942	.	+	.	ID=gene1718;Name=rpsT;Dbxref=GeneID:3192339;gbkey=Gene;gene=rpsT;locus_tag=FTT_1679
NC_006570.2	RefSeq	CDS	1748670	1748942	.	+	0	ID=cds1502;Name=YP_170585.1;Parent=gene1718;Note=binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase;Dbxref=GOA:Q5NEF7,InterPro:IPR002583,UniProtKB%2FSwiss-Prot:Q5NEF7,Genbank:YP_170585.1,GeneID:3192339;gbkey=CDS;product=30S ribosomal protein S20;protein_id=YP_170585.1;transl_table=11
NC_006570.2	RefSeq	gene	1749016	1749372	.	-	.	ID=gene1719;Name=olmA;Dbxref=GeneID:3191055;gbkey=Gene;gene=olmA;locus_tag=FTT_1680c
NC_006570.2	RefSeq	CDS	1749016	1749372	.	-	0	ID=cds1503;Name=YP_170586.1;Parent=gene1719;Note=Similar to Q8KTI1 Outer membrane lipoprotein OmlA from Azaobacter vinelandii %28171 aa%29. FASTA: opt: 208 Z-score: 273.7 E%28%29: 2.1e-07 Smith-Waterman score: 208%3B 30.392 identity in 102 aa overlap;Dbxref=GOA:Q5NEF6,InterPro:IPR007450,UniProtKB%2FTrEMBL:Q5NEF6,Genbank:YP_170586.1,GeneID:3191055;gbkey=CDS;product=outer membrane lipoprotein;protein_id=YP_170586.1;transl_table=11
NC_006570.2	RefSeq	gene	1749380	1749976	.	-	.	ID=gene1720;Name=lpcA;Dbxref=GeneID:3191473;gbkey=Gene;gene=lpcA;locus_tag=FTT_1681c
NC_006570.2	RefSeq	CDS	1749380	1749976	.	-	0	ID=cds1504;Name=YP_170587.1;Parent=gene1720;Note=Similar to Q8EK08 Phosphoheptose isomerase from Shewanella oneidensis %28197 aa%29. FASTA: opt: 705 z-score: 847.8 E%28%29: 2.3e-39 Smith-Waterman score: 705%3B 53.684 identity in 190 aa overlap;Dbxref=GOA:Q5NEF5,InterPro:IPR004515,UniProtKB%2FTrEMBL:Q5NEF5,Genbank:YP_170587.1,GeneID:3191473;gbkey=CDS;product=phosphoheptose isomerase;protein_id=YP_170587.1;transl_table=11
NC_006570.2	RefSeq	gene	1750148	1752455	.	+	.	ID=gene1721;Name=FTT_1682;Dbxref=GeneID:3192376;gbkey=Gene;locus_tag=FTT_1682;pseudo=true
NC_006570.2	RefSeq	gene	1752525	1753676	.	-	.	ID=gene1722;Name=FTT_1683c;Dbxref=GeneID:3192371;gbkey=Gene;locus_tag=FTT_1683c
NC_006570.2	RefSeq	CDS	1752525	1753676	.	-	0	ID=cds1505;Name=YP_170588.1;Parent=gene1722;Note=Similar to Q8NM37 Permeases of the major facilitator superfamily from Corynebacterium glutamicum %28398 aa%29. FASTA: opt: 440 z-score: 489.8 E%28%29: 2e-19 Smith-Waterman score: 440%3B 24.211 identity in 380 aa overlap ORF ftt1683c;Dbxref=InterPro:IPR011701,UniProtKB%2FTrEMBL:Q5NEF4,Genbank:YP_170588.1,GeneID:3192371;gbkey=CDS;product=major facilitator transporter;protein_id=YP_170588.1;transl_table=11
NC_006570.2	RefSeq	gene	1753773	1754675	.	+	.	ID=gene1723;Name=FTT_1684;Dbxref=GeneID:3192501;gbkey=Gene;locus_tag=FTT_1684
NC_006570.2	RefSeq	CDS	1753773	1754675	.	+	0	ID=cds1506;Name=YP_170589.1;Parent=gene1723;Note=Similar to Q8D3N4 Transcriptional regulator from Vibrio vulnificus %28307 aa%29. FASTA: opt: 510 Z-score: 590.3 E%28%29: 5e-25 32.975 identity in 279 aa overlap ORF ftt1684;Dbxref=GOA:Q5NEF3,InterPro:IPR011991,UniProtKB%2FTrEMBL:Q5NEF3,Genbank:YP_170589.1,GeneID:3192501;gbkey=CDS;product=transcriptional regulator;protein_id=YP_170589.1;transl_table=11
NC_006570.2	RefSeq	gene	1754877	1755602	.	+	.	ID=gene1724;Name=FTT_1685;Dbxref=GeneID:3192344;gbkey=Gene;locus_tag=FTT_1685
NC_006570.2	RefSeq	CDS	1754877	1755602	.	+	0	ID=cds1507;Name=YP_170590.1;Parent=gene1724;Note=ORF ftt1685;Dbxref=UniProtKB%2FTrEMBL:Q5NEF2,Genbank:YP_170590.1,GeneID:3192344;gbkey=CDS;product=hypothetical protein;protein_id=YP_170590.1;transl_table=11
NC_006570.2	RefSeq	gene	1755756	1756424	.	-	.	ID=gene1725;Name=FTT_1686c;Dbxref=GeneID:3192358;gbkey=Gene;locus_tag=FTT_1686c
NC_006570.2	RefSeq	CDS	1755756	1756424	.	-	0	ID=cds1508;Name=YP_170591.1;Parent=gene1725;Note=Similar to Q894C5 Proline synthetase associated protein from Clostridium tetani %28225 aa%29. FASTA: opt: 462 z-score: 549.8 E%28%29: 8.9e-23 37.220 identity in 223 aa overlap ORF ftt1686c;Dbxref=InterPro:IPR011078,UniProtKB%2FTrEMBL:Q5NEF1,Genbank:YP_170591.1,GeneID:3192358;gbkey=CDS;product=hypothetical protein;protein_id=YP_170591.1;transl_table=11
NC_006570.2	RefSeq	gene	1756421	1757038	.	-	.	ID=gene1726;Name=gidB;Dbxref=GeneID:3192244;gbkey=Gene;gene=gidB;locus_tag=FTT_1687c
NC_006570.2	RefSeq	CDS	1756421	1757038	.	-	0	ID=cds1509;Name=YP_170592.1;Parent=gene1726;Note=glucose-inhibited division protein B%3B SAM-dependent methyltransferase%3B methylates the N7 position of guanosine in position 527 of 16S rRNA;Dbxref=GOA:Q5NEF0,InterPro:IPR003682,UniProtKB%2FSwiss-Prot:Q5NEF0,Genbank:YP_170592.1,GeneID:3192244;gbkey=CDS;product=16S rRNA methyltransferase GidB;protein_id=YP_170592.1;transl_table=11
NC_006570.2	RefSeq	gene	1757138	1758343	.	+	.	ID=gene1727;Name=FTT_1688;Dbxref=GeneID:3192349;gbkey=Gene;locus_tag=FTT_1688
NC_006570.2	RefSeq	CDS	1757138	1758343	.	+	0	ID=cds1510;Name=YP_170593.1;Parent=gene1727;Note=Similar to Q8EFB8 Tyrosine-specific transport protein from Shewanella oneidensis %28395 aa%29. FASTA: opt: 854 z-score: 967.0 E%28%29: 5.2e-46 38.378 identity in 370 aa overlap ORF ftt1688;Dbxref=GOA:Q5NEE9,InterPro:IPR018227,UniProtKB%2FTrEMBL:Q5NEE9,Genbank:YP_170593.1,GeneID:3192349;gbkey=CDS;product=aromatic amino acid HAAP transporter;protein_id=YP_170593.1;transl_table=11
NC_006570.2	RefSeq	gene	1758340	1759032	.	-	.	ID=gene1728;Name=FTT_1689c;Dbxref=GeneID:3192347;gbkey=Gene;locus_tag=FTT_1689c
NC_006570.2	RefSeq	CDS	1758340	1759032	.	-	0	ID=cds1511;Name=YP_170594.1;Parent=gene1728;Note=Similar to CAD84514 %28Q82WQ9%29 Possible transmembrane protein from Nitrosomonas europaea %28223 aa%29. FASTA: opt: 294 z-score: 358.6 E%28%29: 4e-12 25.481 identity in 208 aa overlap ORF ftt1689c;Dbxref=InterPro:IPR010699,UniProtKB%2FTrEMBL:Q5NEE8,Genbank:YP_170594.1,GeneID:3192347;gbkey=CDS;product=hypothetical protein;protein_id=YP_170594.1;transl_table=11
NC_006570.2	RefSeq	gene	1759436	1760101	.	+	.	ID=gene1729;Name=FTT_1690;Dbxref=GeneID:3192341;gbkey=Gene;locus_tag=FTT_1690
NC_006570.2	RefSeq	CDS	1759436	1760101	.	+	0	ID=cds1512;Name=YP_170595.1;Parent=gene1729;Note=Similar to Q9ABA7 NADH dehydrogenase from Caulobacter crescentus %28220 aa%29. FASTA: opt: 429 z-score: 535.0 E%28%29: 6e-22 35.545 identity in 211 aa overlap ORF ftt1690;Dbxref=GOA:Q5NEE7,InterPro:IPR000415,UniProtKB%2FTrEMBL:Q5NEE7,Genbank:YP_170595.1,GeneID:3192341;gbkey=CDS;product=NADH dehydrogenase;protein_id=YP_170595.1;transl_table=11
NC_006570.2	RefSeq	gene	1760372	1760896	.	+	.	ID=gene1730;Name=FTT_1691;Dbxref=GeneID:3192348;gbkey=Gene;locus_tag=FTT_1691
NC_006570.2	RefSeq	CDS	1760372	1760896	.	+	0	ID=cds1513;Name=YP_170596.1;Parent=gene1730;Note=This CDS is disrupted by the insertion of an ISFtu1 element occurring very near the C-terminal end. It is not clear whether this insertion affects the function of the protein. ORF ftt1691;Dbxref=UniProtKB%2FTrEMBL:Q5NEE6,Genbank:YP_170596.1,GeneID:3192348;gbkey=CDS;product=hypothetical protein;protein_id=YP_170596.1;transl_table=11
NC_006570.2	RefSeq	repeat_region	1760856	1760867	.	+	.	ID=id275;Note=ISFtu1 12bp terminal inverted repeat;Dbxref=GeneID:3192348;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	1760868	1760883	.	+	.	ID=id276;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;Dbxref=GeneID:3192348;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	1760884	1760899	.	+	.	ID=id277;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;gbkey=repeat_region
NC_006570.2	RefSeq	gene	1760920	1761704	.	+	.	ID=gene1731;Name=isftu1;Dbxref=GeneID:3191802;gbkey=Gene;gene=isftu1;locus_tag=FTT_1692
NC_006570.2	RefSeq	CDS	1760920	1761246	.	+	0	ID=cds1514;Name=YP_170621.1;Parent=gene1731;Note=ISFtu1. Transposase%2C member of the IS630 Tc-1 mariner family. Identical to Q93EJ6  transposase from Francisella tularensis %28118 aa%29 from aa 144-261. Identical to Q93EJ7  transposase from Francisella tularensis %28126 aa%29 from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF%27s. ORF1 %28identical to Q93EJ7%29 contains a programmed ribosomal frameshifting motif%2C 5%27-AAAAAAAG-3%27 at aa position 109 which permits frameshifting to ORF2 %28identical to Q93EJ6%29 to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family%2C and also mariner elements%2C show that this transposase shares strongly conserved residues%2C including a fully conserved dipeptide%2CAsp-Glu %28DE%29%2C and a block consisting of a fully conserved Asp and highly conserved Glu%2C separated by 34 or 35 residues %28D35E%29. The conserved dipeptide is only present if ribosomal frameshifting occurs.;Dbxref=UniProtKB%2FTrEMBL:Q5NIH2,Genbank:YP_170621.1,GeneID:3191802;gbkey=CDS;product=transposase;protein_id=YP_170621.1;transl_table=11
NC_006570.2	RefSeq	CDS	1761246	1761704	.	+	0	ID=cds1514;Name=YP_170621.1;Parent=gene1731;Note=ISFtu1. Transposase%2C member of the IS630 Tc-1 mariner family. Identical to Q93EJ6  transposase from Francisella tularensis %28118 aa%29 from aa 144-261. Identical to Q93EJ7  transposase from Francisella tularensis %28126 aa%29 from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF%27s. ORF1 %28identical to Q93EJ7%29 contains a programmed ribosomal frameshifting motif%2C 5%27-AAAAAAAG-3%27 at aa position 109 which permits frameshifting to ORF2 %28identical to Q93EJ6%29 to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family%2C and also mariner elements%2C show that this transposase shares strongly conserved residues%2C including a fully conserved dipeptide%2CAsp-Glu %28DE%29%2C and a block consisting of a fully conserved Asp and highly conserved Glu%2C separated by 34 or 35 residues %28D35E%29. The conserved dipeptide is only present if ribosomal frameshifting occurs.;Dbxref=UniProtKB%2FTrEMBL:Q5NIH2,Genbank:YP_170621.1,GeneID:3191802;gbkey=CDS;product=transposase;protein_id=YP_170621.1;transl_table=11
NC_006570.2	RefSeq	repeat_region	1761792	1761803	.	+	.	ID=id278;Note=ISFtu1 12bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	gene	1761847	1762611	.	-	.	ID=gene1732;Name=FTT_1693c;Dbxref=GeneID:3191497;gbkey=Gene;locus_tag=FTT_1693c
NC_006570.2	RefSeq	CDS	1761847	1762611	.	-	0	ID=cds1515;Name=YP_170598.1;Parent=gene1732;Note=Similar to Q87SC0 conserved hypothetical protein from Vibrio parahaemolyticus %28258 aa%29. FASTA: opt: 724 z-score: 845.1 E%28%29: 3.2e-39 46.094 identity in 256 aa overlap ORF ftt1693c;Dbxref=InterPro:IPR005583,UniProtKB%2FSwiss-Prot:Q5NEE4,Genbank:YP_170598.1,GeneID:3191497;gbkey=CDS;product=hypothetical protein;protein_id=YP_170598.1;transl_table=11
NC_006570.2	RefSeq	gene	1763167	1763242	.	-	.	ID=gene1733;Name=tRNA-Arg %28CCG%29;Dbxref=GeneID:8303686;description=tRNA-Arg %28CCG%29;gbkey=Gene;gene=tRNA-Arg %28CCG%29;locus_tag=FTT_t34
NC_006570.2	RefSeq	tRNA	1763167	1763242	.	-	.	ID=rna40;Dbxref=GeneID:8303686;codons=31;gbkey=tRNA;product=tRNA-Arg
NC_006570.2	RefSeq	exon	1763167	1763242	.	-	.	ID=id279;Parent=rna40;Dbxref=GeneID:8303686;codons=31;gbkey=tRNA;product=tRNA-Arg
NC_006570.2	RefSeq	gene	1763252	1763686	.	-	.	ID=gene1734;Name=FTT_1694c;Dbxref=GeneID:3192354;gbkey=Gene;locus_tag=FTT_1694c
NC_006570.2	RefSeq	CDS	1763252	1763686	.	-	0	ID=cds1516;Name=YP_170599.1;Parent=gene1734;Note=Similar to Q8ZCK6  membrane protein %28Hypothetical%29 from Yersinia pestis %28175 aa%29. FASTA: opt:353 z-score 450 E%28%29:2.9e-17 35.9identity in 142 aa overlap ORF ftt1694c;Dbxref=InterPro:IPR007896,UniProtKB%2FTrEMBL:Q5NEE3,Genbank:YP_170599.1,GeneID:3192354;gbkey=CDS;product=hypothetical protein;protein_id=YP_170599.1;transl_table=11
NC_006570.2	RefSeq	gene	1763937	1764224	.	+	.	ID=gene1735;Name=groES;Dbxref=GeneID:3191890;gbkey=Gene;gene=groES;locus_tag=FTT_1695
NC_006570.2	RefSeq	CDS	1763937	1764224	.	+	0	ID=cds1517;Name=YP_170600.1;Parent=gene1735;Note=10 kDa chaperonin%3B Cpn10%3B GroES%3B forms homoheptameric ring%3B binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it%3B folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES%3B release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring;Dbxref=GOA:Q5NEE2,InterPro:IPR018369,UniProtKB%2FSwiss-Prot:Q5NEE2,Genbank:YP_170600.1,GeneID:3191890;gbkey=CDS;product=co-chaperonin GroES;protein_id=YP_170600.1;transl_table=11
NC_006570.2	RefSeq	gene	1764262	1765896	.	+	.	ID=gene1736;Name=groEL;Dbxref=GeneID:3191101;gbkey=Gene;gene=groEL;locus_tag=FTT_1696
NC_006570.2	RefSeq	CDS	1764262	1765896	.	+	0	ID=cds1518;Name=YP_170601.1;Parent=gene1736;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds%3B many bacteria have multiple copies of the groEL gene which are active under different environmental conditions%3B the B.japonicum protein in this cluster is expressed constitutively%3B in Rhodobacter%2C Corynebacterium and Rhizobium this protein is essential for growth;Dbxref=GOA:Q5NEE1,InterPro:IPR018370,UniProtKB%2FSwiss-Prot:Q5NEE1,Genbank:YP_170601.1,GeneID:3191101;gbkey=CDS;product=molecular chaperone GroEL;protein_id=YP_170601.1;transl_table=11
NC_006570.2	RefSeq	repeat_region	1766013	1766024	.	-	.	ID=id280;Note=ISFtu1 12bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	gene	1766112	1766896	.	-	.	ID=gene1737;Name=isftu1;Dbxref=GeneID:3190864;gbkey=Gene;gene=isftu1;locus_tag=FTT_1697c
NC_006570.2	RefSeq	CDS	1766570	1766896	.	-	0	ID=cds1519;Name=YP_170602.2;Parent=gene1737;Note=ISFtu1. Transposase%2C member of the IS630 Tc-1 mariner family. Identical to Q93EJ6  transposase from Francisella tularensis %28118 aa%29 from aa 144-261. Identical to Q93EJ7  transposase from Francisella tularensis %28126 aa%29 from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF%27s. ORF1 %28identical to Q93EJ7%29 contains a programmed ribosomal frameshifting motif%2C 5%27-AAAAAAAG-3%27 at aa position 109 which permits frameshifting to ORF2 %28identical to Q93EJ6%29 to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family%2C and also mariner elements%2C show that this transposase shares strongly conserved residues%2C including a fully conserved dipeptide%2CAsp-Glu %28DE%29%2C and a block consisting of a fully conserved Asp and highly conserved Glu%2C separated by 34 or 35 residues %28D35E%29. The conserved dipeptide is only present if ribosomal frameshifting occurs.;Dbxref=UniProtKB%2FTrEMBL:Q5NEE0,Genbank:YP_170602.2,GeneID:3190864;gbkey=CDS;product=transposase;protein_id=YP_170602.2;transl_table=11
NC_006570.2	RefSeq	CDS	1766112	1766570	.	-	0	ID=cds1519;Name=YP_170602.2;Parent=gene1737;Note=ISFtu1. Transposase%2C member of the IS630 Tc-1 mariner family. Identical to Q93EJ6  transposase from Francisella tularensis %28118 aa%29 from aa 144-261. Identical to Q93EJ7  transposase from Francisella tularensis %28126 aa%29 from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF%27s. ORF1 %28identical to Q93EJ7%29 contains a programmed ribosomal frameshifting motif%2C 5%27-AAAAAAAG-3%27 at aa position 109 which permits frameshifting to ORF2 %28identical to Q93EJ6%29 to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family%2C and also mariner elements%2C show that this transposase shares strongly conserved residues%2C including a fully conserved dipeptide%2CAsp-Glu %28DE%29%2C and a block consisting of a fully conserved Asp and highly conserved Glu%2C separated by 34 or 35 residues %28D35E%29. The conserved dipeptide is only present if ribosomal frameshifting occurs.;Dbxref=UniProtKB%2FTrEMBL:Q5NEE0,Genbank:YP_170602.2,GeneID:3190864;gbkey=CDS;product=transposase;protein_id=YP_170602.2;transl_table=11
NC_006570.2	RefSeq	repeat_region	1766917	1766932	.	-	.	ID=id281;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	1766933	1766948	.	-	.	ID=id282;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	1766949	1766960	.	-	.	ID=id283;Note=ISFtu1 12bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	gene	1766954	1767670	.	-	.	ID=gene1738;Name=fdh;Dbxref=GeneID:3191879;gbkey=Gene;gene=fdh;locus_tag=FTT_1698c
NC_006570.2	RefSeq	CDS	1766954	1767670	.	-	0	ID=cds1520;Name=YP_170603.1;Parent=gene1738;Note=Similar to FDH_PSESR Formate dehydrogenase from Pseudomonas sp. %28strain 101%29 %28400 aa%29. FASTA: opt: 1074 z-score: 1253.7%2C E%28%29: 5.5e-62%2C 66.949 identity in 236 aa overlap. This CDS is disrupted by the insertion of an ISFtu1 element occurring very near the C-terminal end. It is not clear whether this insertion affects the function of the protein.;Dbxref=GOA:Q5NED9,InterPro:IPR016040,UniProtKB%2FTrEMBL:Q5NED9,Genbank:YP_170603.1,GeneID:3191879;gbkey=CDS;product=formate dehydrogenase;protein_id=YP_170603.1;transl_table=11
NC_006570.2	RefSeq	gene	1768001	1768115	.	-	.	ID=gene1739;Name=5S rRNA;Dbxref=GeneID:8303683;description=5S rRNA;gbkey=Gene;gene=5S rRNA;locus_tag=FTT_r08
NC_006570.2	RefSeq	rRNA	1768001	1768115	.	-	.	ID=rna41;Parent=gene1739;Note=uncertain boundries;Dbxref=GeneID:8303683;gbkey=rRNA;product=5S ribosomal RNA
NC_006570.2	RefSeq	exon	1768001	1768115	.	-	.	ID=id284;Parent=rna41;Note=uncertain boundries;Dbxref=GeneID:8303683;gbkey=rRNA;product=5S ribosomal RNA
NC_006570.2	RefSeq	gene	1768166	1771027	.	-	.	ID=gene1740;Name=23S rRNA;Dbxref=GeneID:3192387;description=23S rRNA;gbkey=Gene;gene=23S rRNA;locus_tag=FTT_r09
NC_006570.2	RefSeq	rRNA	1768166	1771027	.	-	.	ID=rna42;Parent=gene1740;Note=uncertain boundries;Dbxref=GeneID:3192387;gbkey=rRNA;product=23S ribosomal RNA
NC_006570.2	RefSeq	exon	1768166	1771027	.	-	.	ID=id285;Parent=rna42;Note=uncertain boundries;Dbxref=GeneID:3192387;gbkey=rRNA;product=23S ribosomal RNA
NC_006570.2	RefSeq	gene	1771102	1771177	.	-	.	ID=gene1741;Name=tRNA-Ala %28TGC%29;Dbxref=GeneID:8303692;description=tRNA-Ala %28TGC%29;gbkey=Gene;gene=tRNA-Ala %28TGC%29;locus_tag=FTT_t35
NC_006570.2	RefSeq	tRNA	1771102	1771177	.	-	.	ID=rna43;Dbxref=GeneID:8303692;codons=54;gbkey=tRNA;product=tRNA-Ala
NC_006570.2	RefSeq	exon	1771102	1771177	.	-	.	ID=id286;Parent=rna43;Dbxref=GeneID:8303692;codons=54;gbkey=tRNA;product=tRNA-Ala
NC_006570.2	RefSeq	gene	1771195	1771268	.	-	.	ID=gene1742;Name=tRNA-Ile %28GAT%29;Dbxref=GeneID:8303713;description=tRNA-Ile %28GAT%29;gbkey=Gene;gene=tRNA-Ile %28GAT%29;locus_tag=FTT_t36
NC_006570.2	RefSeq	tRNA	1771195	1771268	.	-	.	ID=rna44;Dbxref=GeneID:8303713;codons=33;gbkey=tRNA;product=tRNA-Ile
NC_006570.2	RefSeq	exon	1771195	1771268	.	-	.	ID=id287;Parent=rna44;Dbxref=GeneID:8303713;codons=33;gbkey=tRNA;product=tRNA-Ile
NC_006570.2	RefSeq	gene	1771363	1772885	.	-	.	ID=gene1743;Name=16S rRNA;Dbxref=GeneID:3192537;description=16S rRNA;gbkey=Gene;gene=16S rRNA;locus_tag=FTT_r10
NC_006570.2	RefSeq	rRNA	1771363	1772885	.	-	.	ID=rna45;Parent=gene1743;Note=uncertain boundries;Dbxref=GeneID:3192537;gbkey=rRNA;product=16S ribosomal RNA
NC_006570.2	RefSeq	exon	1771363	1772885	.	-	.	ID=id288;Parent=rna45;Note=uncertain boundries;Dbxref=GeneID:3192537;gbkey=rRNA;product=16S ribosomal RNA
NC_006570.2	RefSeq	gene	1773260	1775722	.	+	.	ID=gene1744;Name=pdpA2;Dbxref=GeneID:3191298;gbkey=Gene;gene=pdpA2;locus_tag=FTT_1699
NC_006570.2	RefSeq	CDS	1773260	1775722	.	+	0	ID=cds1521;Name=YP_170604.1;Parent=gene1744;Note=Similar to AAP58968.1 %28Q7X3I9%29 PdpA from Francisella novicida %28820 aa%29. BLAST Score %3D 1545 bits %284000%29%2C Expect %3D 0.0 Identities %3D 777%2F820 %2894%29%2C Positives %3D 787%2F820 %2895%29. Identical to FTT1344. It is part of the duplicated region 1767715..1801625 which is identical to 1374371..1408281;Dbxref=UniProtKB%2FTrEMBL:Q5NED8,Genbank:YP_170604.1,GeneID:3191298;gbkey=CDS;product=hypothetical protein;protein_id=YP_170604.1;transl_table=11
NC_006570.2	RefSeq	gene	1775727	1779008	.	+	.	ID=gene1745;Name=pdpB2;Dbxref=GeneID:3191305;gbkey=Gene;gene=pdpB2;locus_tag=FTT_1700
NC_006570.2	RefSeq	CDS	1775727	1779008	.	+	0	ID=cds1522;Name=YP_170605.1;Parent=gene1745;Note=Similar to AAP58967.1 %28Q7X3J0%29 PdpB from Francisella novicida %281093 aa%29. BLAST Score %3D 1914 bits %284959%29%2C Expect %3D 0.0 Identities %3D 975%2F1093 %2889%29%2CPositives %3D 988%2F1093 %2890%29. This protein is identical to FTT1345. It is part of the duplicated region 1767715..1801625 which is identical to 1374371..140828;Dbxref=InterPro:IPR018846,UniProtKB%2FTrEMBL:Q5NED7,Genbank:YP_170605.1,GeneID:3191305;gbkey=CDS;product=hypothetical protein;protein_id=YP_170605.1;transl_table=11
NC_006570.2	RefSeq	gene	1778998	1779375	.	+	.	ID=gene1746;Name=FTT_1701;Dbxref=GeneID:3192364;gbkey=Gene;locus_tag=FTT_1701
NC_006570.2	RefSeq	CDS	1778998	1779375	.	+	0	ID=cds1523;Name=YP_170606.1;Parent=gene1746;Note=Identical to FTT1346. It is part of the duplicated region 1767715..1801625 which is identical to 1374371..1408281 ORF ftt1701;Dbxref=UniProtKB%2FTrEMBL:Q5NED6,Genbank:YP_170606.1,GeneID:3192364;gbkey=CDS;product=hypothetical protein;protein_id=YP_170606.1;transl_table=11
NC_006570.2	RefSeq	gene	1779388	1779882	.	+	.	ID=gene1747;Name=FTT_1702;Dbxref=GeneID:3192355;gbkey=Gene;locus_tag=FTT_1702
NC_006570.2	RefSeq	CDS	1779388	1779882	.	+	0	ID=cds1524;Name=YP_170607.1;Parent=gene1747;Note=Similar to AAP58969.1 %28Q7XI38%29 unknown protein from Francisella novicida %28164 aa%29. BLAST Score %3D 305 bits %28780%29%2C Expect %3D 2e-82 Identities %3D 163%2F164 %2899%29%2CPositives %3D 163%2F164 %2899%29. Identical to FTT1347. It is part of the duplicated region 1767715..1801625 which is identical to 1374371..1408281 ORF ftt1702;Dbxref=UniProtKB%2FTrEMBL:Q5NED5,Genbank:YP_170607.1,GeneID:3192355;gbkey=CDS;product=hypothetical protein;protein_id=YP_170607.1;transl_table=11
NC_006570.2	RefSeq	gene	1779887	1781617	.	+	.	ID=gene1748;Name=FTT_1703;Dbxref=GeneID:3192367;gbkey=Gene;locus_tag=FTT_1703
NC_006570.2	RefSeq	CDS	1779887	1781617	.	+	0	ID=cds1525;Name=YP_170608.1;Parent=gene1748;Note=1-213 aa similar to AAP58970.1 %28Q7X3I7%29 unknown Francisella novicida %28212 aa%29. BLAST Score 352 %2CExpect %3D 1e-95 Identities %3D 177%2F209 %2884%29%2C Positives %3D 189%2F209 %2890%29. 330-580 aa similar to AAP58971.1 %28Q7X3I6%29 unknown protein from Francisella tularensis subsp. novicida %28251 aa%29. BLAST Score %3D 483 bits %281244%29%2C Expect %3D e-135 Identities %3D 243%2F251 %2896%29%2C Positives %3D 249%2F251 %2899%29. Identical to FTT1348. It is part of the duplicated region 1767715..1801625 which is identical to 1374371..1408281. Protein fusion product of two hypothetical proteins in F. novicida. ORF ftt1703;Dbxref=UniProtKB%2FTrEMBL:Q5NED4,Genbank:YP_170608.1,GeneID:3192367;gbkey=CDS;product=hypothetical protein;protein_id=YP_170608.1;transl_table=11
NC_006570.2	RefSeq	gene	1781618	1782139	.	+	.	ID=gene1749;Name=FTT_1704;Dbxref=GeneID:3192362;gbkey=Gene;locus_tag=FTT_1704
NC_006570.2	RefSeq	CDS	1781618	1782139	.	+	0	ID=cds1526;Name=YP_170609.1;Parent=gene1749;Note=Similar to AAP58972.1 %28Q7X3I5%29 unknown protein from Francisella novicida %28173 aa%29. BLAST Score %3D 336%2C Expect %3D 1e-91 Identities %3D 170%2F173 %2898%29%2C Positives %3D 171%2F173 %2898%29. Identical to FTT1349. It is part of the duplicated region 1767715..1801625 which is identical to 1374371..1408281 ORF ftt1704;Dbxref=UniProtKB%2FTrEMBL:Q5NED3,Genbank:YP_170609.1,GeneID:3192362;gbkey=CDS;product=hypothetical protein;protein_id=YP_170609.1;transl_table=11
NC_006570.2	RefSeq	gene	1782152	1783582	.	+	.	ID=gene1750;Name=FTT_1705;Dbxref=GeneID:3192369;gbkey=Gene;locus_tag=FTT_1705
NC_006570.2	RefSeq	CDS	1782152	1783582	.	+	0	ID=cds1527;Name=YP_170610.1;Parent=gene1750;Note=Similar to AAP58973.1 %28Q7X3I4%29 unknown protein from Francisella novicida %28476 aa%29. BLAST Score %3D 864 bits %282233%29%2C Expect %3D 0.0 Identities %3D 433%2F476 %2890%29%2CPositives %3D 437%2F476 %2891%29. Identical to FTT1350. It is part of the duplicated region 1767715..1801625 which is identical to 1374371..1408281 ORF ftt1705;Dbxref=UniProtKB%2FTrEMBL:Q5NED2,Genbank:YP_170610.1,GeneID:3192369;gbkey=CDS;product=hypothetical protein;protein_id=YP_170610.1;transl_table=11
NC_006570.2	RefSeq	gene	1783595	1784218	.	+	.	ID=gene1751;Name=FTT_1706;Dbxref=GeneID:3192554;gbkey=Gene;locus_tag=FTT_1706
NC_006570.2	RefSeq	CDS	1783595	1784218	.	+	0	ID=cds1528;Name=YP_170611.1;Parent=gene1751;Note=Similar to AAP58974.1 %28Q7X3I3%29 unknown protein from Francisella novicida %28207 aa%29. BLAST Score %3D 391 bits %281005%29%2C Expect %3D e-108 Identities %3D 194%2F207 %2893%29%2CPositives %3D 195%2F207 %2894%29. Identical to FTT1351. It is part of the duplicated region 1767715..1801625 which is identical to 1374371..1408281 ORF ftt1706;Dbxref=UniProtKB%2FTrEMBL:Q5NED1,Genbank:YP_170611.1,GeneID:3192554;gbkey=CDS;product=hypothetical protein;protein_id=YP_170611.1;transl_table=11
NC_006570.2	RefSeq	gene	1784240	1785391	.	+	.	ID=gene1752;Name=FTT_1707;Dbxref=GeneID:3192534;gbkey=Gene;locus_tag=FTT_1707
NC_006570.2	RefSeq	CDS	1784240	1785391	.	+	0	ID=cds1529;Name=YP_170612.1;Parent=gene1752;Note=Similar to AAP58975.1 %28Q7X3I2%29 unknown protein from Francisella novicida %28262 aa%29%2C BLAST Score %3D 443 bits %281140%29%2C Expect %3D e-12 Identities %3D 229%2F262 %2887%29%2CPositives %3D 235%2F262 %2889%29. Identical to FTT1352. It is part of the duplicated region 1767715..1801625 which is identical to 1374371..1408281 ORF ftt1707;Dbxref=UniProtKB%2FTrEMBL:Q5NED0,Genbank:YP_170612.1,GeneID:3192534;gbkey=CDS;product=hypothetical protein;protein_id=YP_170612.1;transl_table=11
NC_006570.2	RefSeq	gene	1785357	1786130	.	+	.	ID=gene1753;Name=FTT_1708;Dbxref=GeneID:3192550;gbkey=Gene;locus_tag=FTT_1708
NC_006570.2	RefSeq	CDS	1785357	1786130	.	+	0	ID=cds1530;Name=YP_170613.1;Parent=gene1753;Note=Similar to AAP58976.1 %28Q7X3I1%29 unknown protein from Francisella novicida %28257 aa%29. BLAST Score %3D 412%2C Expect %3D e-114 Identities %3D 213%2F257 %2882%29%2C Positives %3D 213%2F257 %2882%29. Identical to FTT1353. It is part of the duplicated region 1767715..1801625 which is identical to 1374371..1408281 ORF ftt1708;Dbxref=UniProtKB%2FTrEMBL:Q5NF87,Genbank:YP_170613.1,GeneID:3192550;gbkey=CDS;product=hypothetical protein;protein_id=YP_170613.1;transl_table=11
NC_006570.2	RefSeq	gene	1786170	1790156	.	+	.	ID=gene1754;Name=pdpC2;Dbxref=GeneID:3192535;gbkey=Gene;gene=pdpC2;locus_tag=FTT_1709
NC_006570.2	RefSeq	CDS	1786170	1790156	.	+	0	ID=cds1531;Name=YP_170614.1;Parent=gene1754;Note=Similar to AAP58966.1 PdpC from Francisella novicida %281218 aa%29. BLAST Score %3D 2172%2C Expect %3D 0.0 Identities %3D 1089%2F1220 %2889%29%2C Positives %3D 1120%2F1220 %2891%29%2CGaps %3D 3%2F1220 %280%29. Identical to FTT1354. It is part of the duplicated region 1767715..1801625 which is identical to 1374371..1408281;Dbxref=UniProtKB%2FTrEMBL:Q5NEC8,Genbank:YP_170614.1,GeneID:3192535;gbkey=CDS;product=hypothetical protein;protein_id=YP_170614.1;transl_table=11
NC_006570.2	RefSeq	gene	1790174	1790749	.	+	.	ID=gene1755;Name=FTT_1710;Dbxref=GeneID:3190953;gbkey=Gene;locus_tag=FTT_1710
NC_006570.2	RefSeq	CDS	1790174	1790749	.	+	0	ID=cds1532;Name=YP_170615.1;Parent=gene1755;Note=Similar to AAP58977.1 %28Q7X3I0%29 unknown protein from Francisella novicida %28188 aa%29. BLAST Score %3D 321%2C Expect %3D 3e-87 Identities %3D 156%2F174 %2889%29%2C Positives %3D 162%2F174 %2893%29. Identical to FTT1355. It is part of the duplicated region 1767715..1801625 which is identical to 1374371..1408281 ORF ftt1710;Dbxref=UniProtKB%2FTrEMBL:Q5NEC7,Genbank:YP_170615.1,GeneID:3190953;gbkey=CDS;product=hypothetical protein;protein_id=YP_170615.1;transl_table=11
NC_006570.2	RefSeq	gene	1790756	1791961	.	-	.	ID=gene1756;Name=iglD2;Dbxref=GeneID:3192363;gbkey=Gene;gene=iglD2;locus_tag=FTT_1711c
NC_006570.2	RefSeq	CDS	1790756	1791961	.	-	0	ID=cds1533;Name=YP_170616.1;Parent=gene1756;Note=Similar to AAP58965.1 %28Q7C3J6%29 IglD from Francisella novicida %28398 aa%29. BLAST Score %3D 746%2C Expect %3D 0.0 Identities %3D 382%2F398 %2895%29%2C Positives %3D 383%2F398 %2896%29 Identical to FTT1356. It is part of the duplicated region 1767715..1801625 which is identical to 1374371..1408281;Dbxref=UniProtKB%2FTrEMBL:Q5NEC6,Genbank:YP_170616.1,GeneID:3192363;gbkey=CDS;product=intracellular growth locus%2C subunit D;protein_id=YP_170616.1;transl_table=11
NC_006570.2	RefSeq	gene	1791973	1792608	.	-	.	ID=gene1757;Name=iglC2;Dbxref=GeneID:3191814;gbkey=Gene;gene=iglC2;locus_tag=FTT_1712c
NC_006570.2	RefSeq	CDS	1791973	1792608	.	-	0	ID=cds1534;Name=YP_170617.1;Parent=gene1757;Note=Similar to AAP58964.1 %28Q7X3J5%29 IglC from Francisella novicida %2823 kDa protein%29 %28211 aa%29. BLAST Score %3D 405%2CExpect %3D e-112 Identities %3D 209%2F211 %2899%29%2C Positives %3D 210%2F211 %2899%29. Identical to FTT1357. It is part of the duplicated region 1767715..1801625 which is identical to 1374371..1408281;Dbxref=UniProtKB%2FTrEMBL:Q5NEC5,Genbank:YP_170617.1,GeneID:3191814;gbkey=CDS;product=intracellular growth locus%2C subunit C;protein_id=YP_170617.1;transl_table=11
NC_006570.2	RefSeq	gene	1792619	1794163	.	-	.	ID=gene1758;Name=iglB2;Dbxref=GeneID:3191488;gbkey=Gene;gene=iglB2;locus_tag=FTT_1713c
NC_006570.2	RefSeq	CDS	1792619	1794163	.	-	0	ID=cds1535;Name=YP_170618.1;Parent=gene1758;Note=Similar to AAP58963.1 %28Q7X3J4%29 IglB from Francisella novicida %28514 aa%29. BLAST Score %3D 997%2C Expect %3D 0.0 Identities %3D 496%2F514 %2896%29%2C Positives %3D 499%2F514 %2897%29. Identical to FTT1358. It is part of the duplicated region 1767715..1801625 which is identical to 1374371..1408281;Dbxref=InterPro:IPR010269,UniProtKB%2FTrEMBL:Q5NEC4,Genbank:YP_170618.1,GeneID:3191488;gbkey=CDS;product=intracellular growth locus%2C subunit B;protein_id=YP_170618.1;transl_table=11
NC_006570.2	RefSeq	gene	1794153	1794743	.	-	.	ID=gene1759;Name=iglA2;Dbxref=GeneID:3191759;gbkey=Gene;gene=iglA2;locus_tag=FTT_1714c
NC_006570.2	RefSeq	CDS	1794153	1794743	.	-	0	ID=cds1536;Name=YP_170619.1;Parent=gene1759;Note=Similar to AAP58962.1 %28Q7X3J5%29 IglA from Francisella novicida %28184 aa%29. BLAST Score %3D 350%2C Expect %3D 6e-96 Identities %3D 181%2F184 %2898%29%2C Positives %3D 181%2F184 %2898%29. Identical to FTT1359. It is part of the duplicated region 1767715..1801625 which is identical to 1374371..1408281;Dbxref=InterPro:IPR008312,UniProtKB%2FTrEMBL:Q5NEC3,Genbank:YP_170619.1,GeneID:3191759;gbkey=CDS;product=intracellular growth locus%2C subunit A;protein_id=YP_170619.1;transl_table=11
NC_006570.2	RefSeq	gene	1794788	1798375	.	-	.	ID=gene1760;Name=pdpD2;Dbxref=GeneID:3191313;gbkey=Gene;gene=pdpD2;locus_tag=FTT_1715c
NC_006570.2	RefSeq	CDS	1794788	1798375	.	-	0	ID=cds1537;Name=YP_170620.1;Parent=gene1760;Note=Similar to AAP58961.1 %28Q7C3J6%29 PdpD from Francisella novicida %281245 aa%29. BLAST Score %3D 2194%2C Expect %3D 0.0 Identities %3D 1133%2F1245 %2891%29%2C Positives %3D 1154%2F1245 %2892%29%2C Gaps %3D 50%2F1245 %284%29. Identical to FTT1360. It is part of the duplicated region 1767715..1801625 which is identical to 1374371..1408281;Dbxref=UniProtKB%2FTrEMBL:Q5NEC2,Genbank:YP_170620.1,GeneID:3191313;gbkey=CDS;product=hypothetical protein;protein_id=YP_170620.1;transl_table=11
NC_006570.2	RefSeq	gene	1798478	1799620	.	-	.	ID=gene1761;Name=FTT_1716c;Dbxref=GeneID:3190907;gbkey=Gene;locus_tag=FTT_1716c;pseudo=true
NC_006570.2	RefSeq	gene	1799755	1801581	.	+	.	ID=gene1762;Name=FTT_1717;Dbxref=GeneID:3191774;gbkey=Gene;locus_tag=FTT_1717;pseudo=true
NC_006570.2	RefSeq	repeat_region	1800632	1800643	.	-	.	ID=id289;Note=ISFtu1 12bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	gene	1800731	1801515	.	-	.	ID=gene1763;Name=isftu1;Dbxref=GeneID:3190844;gbkey=Gene;gene=isftu1;locus_tag=FTT_1718c
NC_006570.2	RefSeq	CDS	1801189	1801515	.	-	0	ID=cds1538;Name=YP_170638.1;Parent=gene1763;Note=ISFtu1. Transposase%2C member of the IS630 Tc-1 mariner family. Identical to Q93EJ6  transposase from Francisella tularensis %28118 aa%29 from aa 144-261. Identical to Q93EJ7  transposase from Francisella tularensis %28126 aa%29 from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF%27s. ORF1 %28identical to Q93EJ7%29 contains a programmed ribosomal frameshifting motif%2C 5%27-AAAAAAAG-3%27 at aa position 109 which permits frameshifting to ORF2 %28identical to Q93EJ6%29 to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family%2C and also mariner elements%2C show that this transposase shares strongly conserved residues%2C including a fully conserved dipeptide%2CAsp-Glu %28DE%29%2C and a block consisting of a fully conserved Asp and highly conserved Glu%2C separated by 34 or 35 residues %28D35E%29. The conserved dipeptide is only present if ribosomal frameshifting occurs.;Dbxref=UniProtKB%2FTrEMBL:Q5NIH2,Genbank:YP_170638.1,GeneID:3190844;gbkey=CDS;product=transposase;protein_id=YP_170638.1;transl_table=11
NC_006570.2	RefSeq	CDS	1800731	1801189	.	-	0	ID=cds1538;Name=YP_170638.1;Parent=gene1763;Note=ISFtu1. Transposase%2C member of the IS630 Tc-1 mariner family. Identical to Q93EJ6  transposase from Francisella tularensis %28118 aa%29 from aa 144-261. Identical to Q93EJ7  transposase from Francisella tularensis %28126 aa%29 from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF%27s. ORF1 %28identical to Q93EJ7%29 contains a programmed ribosomal frameshifting motif%2C 5%27-AAAAAAAG-3%27 at aa position 109 which permits frameshifting to ORF2 %28identical to Q93EJ6%29 to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family%2C and also mariner elements%2C show that this transposase shares strongly conserved residues%2C including a fully conserved dipeptide%2CAsp-Glu %28DE%29%2C and a block consisting of a fully conserved Asp and highly conserved Glu%2C separated by 34 or 35 residues %28D35E%29. The conserved dipeptide is only present if ribosomal frameshifting occurs.;Dbxref=UniProtKB%2FTrEMBL:Q5NIH2,Genbank:YP_170638.1,GeneID:3190844;gbkey=CDS;product=transposase;protein_id=YP_170638.1;transl_table=11
NC_006570.2	RefSeq	repeat_region	1801536	1801551	.	-	.	ID=id290;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	1801552	1801567	.	-	.	ID=id291;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	1801568	1801579	.	-	.	ID=id292;Note=ISFtu1 12bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	gene	1801580	1802095	.	-	.	ID=gene1764;Name=FTT_1719c;Dbxref=GeneID:8303694;gbkey=Gene;locus_tag=FTT_1719c;pseudo=true
NC_006570.2	RefSeq	gene	1802073	1805945	.	-	.	ID=gene1765;Name=purL;Dbxref=GeneID:3191665;gbkey=Gene;gene=purL;locus_tag=FTT_1720c
NC_006570.2	RefSeq	CDS	1802073	1805945	.	-	0	ID=cds1539;Name=YP_170622.1;Parent=gene1765;Note=catalyzes the formation of 2-%28formamido%29-N1-%285-phospho-D-ribosyl%29acetamidine from N2-formyl-N1-%285-phospho-D-ribosyl%29glycinamide and L-glutamine in purine biosynthesis;Dbxref=GOA:Q5NEC0,InterPro:IPR017926,UniProtKB%2FTrEMBL:Q5NEC0,Genbank:YP_170622.1,GeneID:3191665;gbkey=CDS;product=phosphoribosylformylglycinamidine synthase;protein_id=YP_170622.1;transl_table=11
NC_006570.2	RefSeq	gene	1805945	1807435	.	-	.	ID=gene1766;Name=purF;Dbxref=GeneID:3191669;gbkey=Gene;gene=purF;locus_tag=FTT_1721c
NC_006570.2	RefSeq	CDS	1805945	1807435	.	-	0	ID=cds1540;Name=YP_170623.1;Parent=gene1766;Note=Catalyzes first step of the de novo purine nucleotide biosynthetic pathway;Dbxref=GOA:Q5NEB9,InterPro:IPR017932,UniProtKB%2FTrEMBL:Q5NEB9,Genbank:YP_170623.1,GeneID:3191669;gbkey=CDS;product=amidophosphoribosyltransferase;protein_id=YP_170623.1;transl_table=11
NC_006570.2	RefSeq	gene	1807529	1808875	.	-	.	ID=gene1767;Name=gad;Dbxref=GeneID:3191876;gbkey=Gene;gene=gad;locus_tag=FTT_1722c
NC_006570.2	RefSeq	CDS	1807529	1808875	.	-	0	ID=cds1541;Name=YP_170624.1;Parent=gene1767;Note=Similar to Q8FHG5 Glutamate decarboxylase beta from E. coli %28489 aa%29. FASTA: opt: 1709 Z-score: 1968.5 bits: 373.6 E%28%29: 8.6e-102 Smith-Waterman score: 1709%3B 57.011 identity in 435 aa overlap;Dbxref=GOA:Q5NEB8,InterPro:IPR015421,UniProtKB%2FTrEMBL:Q5NEB8,Genbank:YP_170624.1,GeneID:3191876;gbkey=CDS;product=glutamate decarboxylase;protein_id=YP_170624.1;transl_table=11
NC_006570.2	RefSeq	gene	1808886	1809530	.	-	.	ID=gene1768;Name=FTT_1723c;Dbxref=GeneID:3192138;gbkey=Gene;locus_tag=FTT_1723c
NC_006570.2	RefSeq	CDS	1808886	1809530	.	-	0	ID=cds1542;Name=YP_170625.1;Parent=gene1768;Note=Similar to GSP_BACBR %28P40683%29 4%27-phosphopantetheinyl transferase from Bacillus brevis %28237 aa%29. FASTA: opt: 224 Z-score: 292.3 E%28%29: 2.2e-08 Smith-Waterman score: 224%3B 33.929 identity in 112 aa overlap ORF ftt1723c;Dbxref=GOA:Q5NEB7,InterPro:IPR008278,UniProtKB%2FTrEMBL:Q5NEB7,Genbank:YP_170625.1,GeneID:3192138;gbkey=CDS;product=hypothetical protein;protein_id=YP_170625.1;transl_table=11
NC_006570.2	RefSeq	gene	1809536	1811065	.	-	.	ID=gene1769;Name=tolC;Dbxref=GeneID:3191456;gbkey=Gene;gene=tolC;locus_tag=FTT_1724c
NC_006570.2	RefSeq	CDS	1809536	1811065	.	-	0	ID=cds1543;Name=YP_170626.1;Parent=gene1769;Note=Similar to TOLC_ECOLI %28P02930%29 Outer membrane protein tolC precursor from E. coli %28495 aa%29. FASTA: opt: 548 Z-score: 649.7 E%28%29: 2.7e-28 Smith-Waterman score: 548%3B 28.000 identity in 425 aa overlap;Dbxref=GOA:Q5NEB6,InterPro:IPR003423,UniProtKB%2FTrEMBL:Q5NEB6,Genbank:YP_170626.1,GeneID:3191456;gbkey=CDS;product=outer membrane protein TolC;protein_id=YP_170626.1;transl_table=11
NC_006570.2	RefSeq	gene	1811074	1811694	.	-	.	ID=gene1770;Name=pcm;Dbxref=GeneID:3191449;gbkey=Gene;gene=pcm;locus_tag=FTT_1725c
NC_006570.2	RefSeq	CDS	1811074	1811694	.	-	0	ID=cds1544;Name=YP_170627.1;Parent=gene1770;Note=Similar to Q9JXU0 Protein-L-isoaspartate O-methyltransferase from Neisseria meningitidis %28218 aa%29. FASTA: opt: 335 Z-score: 438.9 E%28%29: 1.5e-16 Smith-Waterman score: 335%3B 33.659 identity in 205 aa overlap;Dbxref=GOA:Q5NEB5,InterPro:IPR000682,UniProtKB%2FTrEMBL:Q5NEB5,Genbank:YP_170627.1,GeneID:3191449;gbkey=CDS;product=protein-L-isoaspartate O-methyltransferase;protein_id=YP_170627.1;transl_table=11
NC_006570.2	RefSeq	gene	1812014	1813345	.	+	.	ID=gene1771;Name=yegQ;Dbxref=GeneID:3192162;gbkey=Gene;gene=yegQ;locus_tag=FTT_1726
NC_006570.2	RefSeq	CDS	1812014	1813345	.	+	0	ID=cds1545;Name=YP_170628.1;Parent=gene1771;Note=Similar to YEGQ_ECOLI %28P76403%29  protease yegQ from E. coli %28453 aa%29. FASTA: opt: 1828 Z-score: 2215.7 E%28%29: 1.6e-115 Smith-Waterman score: 1828%3B 61.745identity in 447 aa overlap Truncated ortholog %28188 aa%29 previously reported in Schu as O68834 Hypothetical 21.3 kDa protein and AAC12939 unknown;Dbxref=GOA:Q5NEB4,InterPro:IPR001539,UniProtKB%2FTrEMBL:Q5NEB4,Genbank:YP_170628.1,GeneID:3192162;gbkey=CDS;product=protease yegQ;protein_id=YP_170628.1;transl_table=11
NC_006570.2	RefSeq	gene	1813386	1814576	.	-	.	ID=gene1772;Name=FTT_1727c;Dbxref=GeneID:3192514;gbkey=Gene;locus_tag=FTT_1727c
NC_006570.2	RefSeq	CDS	1813386	1814576	.	-	0	ID=cds1546;Name=YP_170629.1;Parent=gene1772;Note=Similar to Q83CE1 Drug resistance transporter%2C Bcr%2FCflA family from Coxiella burnetii %28398 aa%29. FASTA: opt: 957 Z-score: 1006.0 E%28%29: 3.8e-48 Smith-Waterman score: 957%3B 38.542identity in 384 aa overlap ORF ftt1727c;Dbxref=GOA:Q5NEB3,InterPro:IPR011701,UniProtKB%2FTrEMBL:Q5NEB3,Genbank:YP_170629.1,GeneID:3192514;gbkey=CDS;product=multidrug resistance protein%2C membrane located;protein_id=YP_170629.1;transl_table=11
NC_006570.2	RefSeq	gene	1814742	1816169	.	+	.	ID=gene1773;Name=nhaD;Dbxref=GeneID:3191701;gbkey=Gene;gene=nhaD;locus_tag=FTT_1728
NC_006570.2	RefSeq	CDS	1814742	1816169	.	+	0	ID=cds1547;Name=YP_170630.1;Parent=gene1773;Note=Similar to Q8D4S6 Na%2B%2FH%2B antiporter NhaD from Vibrio vulnificus %28478 aa%29. FASTA: opt: 1428 Z-score: 1679.2 E%28%29: 1.2e-85 Smith-Waterman score: 1592%3B 50.617identity in 486 aa overlap;Dbxref=GOA:Q5NEB2,InterPro:IPR018390,UniProtKB%2FTrEMBL:Q5NEB2,Genbank:YP_170630.1,GeneID:3191701;gbkey=CDS;product=Na%2B%2FH%2B antiporter;protein_id=YP_170630.1;transl_table=11
NC_006570.2	RefSeq	gene	1816236	1817748	.	-	.	ID=gene1774;Name=abcZ;Dbxref=GeneID:3192525;gbkey=Gene;gene=abcZ;locus_tag=FTT_1729c;pseudo=true
NC_006570.2	RefSeq	gene	1817820	1819694	.	-	.	ID=gene1775;Name=FTT_1730c;Dbxref=GeneID:3192505;gbkey=Gene;locus_tag=FTT_1730c
NC_006570.2	RefSeq	CDS	1817820	1819694	.	-	0	ID=cds1548;Name=YP_170631.1;Parent=gene1775;Note=Similar to Q97MC6 Amino acid transporter from Clostridium acetobutylicum %28620 aa%29. FASTA: opt: 1338 Z-score: 1514.2 E%28%29: 1.9e-76 Smith-Waterman score: 1338%3B 37.745 identity in 612 aa overlap ORF ftt1730c;Dbxref=GOA:Q5NEB1,InterPro:IPR004841,UniProtKB%2FTrEMBL:Q5NEB1,Genbank:YP_170631.1,GeneID:3192505;gbkey=CDS;product=amino acid transporter;protein_id=YP_170631.1;transl_table=11
NC_006570.2	RefSeq	gene	1819701	1820705	.	-	.	ID=gene1776;Name=obgE;Dbxref=GeneID:3191931;gbkey=Gene;gene=obgE;locus_tag=FTT_1731c
NC_006570.2	RefSeq	CDS	1819701	1820705	.	-	0	ID=cds1549;Name=YP_170632.1;Parent=gene1776;Note=essential GTPase%3B exhibits high exchange rate for GTP%2FGDP%3B associates with 50S ribosomal subunit%3B involved in regulation of chromosomal replication;Dbxref=GOA:Q5NEB0,InterPro:IPR014100,UniProtKB%2FTrEMBL:Q5NEB0,Genbank:YP_170632.1,GeneID:3191931;gbkey=CDS;product=GTPase ObgE;protein_id=YP_170632.1;transl_table=11
NC_006570.2	RefSeq	gene	1820781	1821977	.	-	.	ID=gene1777;Name=FTT_1732c;Dbxref=GeneID:3192136;gbkey=Gene;locus_tag=FTT_1732c
NC_006570.2	RefSeq	CDS	1820781	1821977	.	-	0	ID=cds1550;Name=YP_170633.1;Parent=gene1777;Note=Similar to Q8FGM8 Tyrosine-specific transport protein from E. coli %28403 aa%29. FASTA: opt: 724 Z-score: 839.2 E%28%29: 6.8e-39 Smith-Waterman score: 724%3B 35.638 identity in 376 aa overlap ORF ftt1732;Dbxref=GOA:Q5NEA9,InterPro:IPR018227,UniProtKB%2FTrEMBL:Q5NEA9,Genbank:YP_170633.1,GeneID:3192136;gbkey=CDS;product=aromatic amino acid HAAP transporter;protein_id=YP_170633.1;transl_table=11
NC_006570.2	RefSeq	gene	1822104	1822415	.	+	.	ID=gene1778;Name=FTT_1733;Dbxref=GeneID:3192143;gbkey=Gene;locus_tag=FTT_1733
NC_006570.2	RefSeq	CDS	1822104	1822415	.	+	0	ID=cds1551;Name=YP_170634.1;Parent=gene1778;Note=ORF ftt1733;Dbxref=UniProtKB%2FTrEMBL:Q5NEA8,Genbank:YP_170634.1,GeneID:3192143;gbkey=CDS;product=hypothetical protein;protein_id=YP_170634.1;transl_table=11
NC_006570.2	RefSeq	gene	1822572	1823216	.	-	.	ID=gene1779;Name=fopA2;Dbxref=GeneID:3192173;gbkey=Gene;gene=fopA2;locus_tag=FTT_1734c;pseudo=true
NC_006570.2	RefSeq	gene	1823284	1823954	.	-	.	ID=gene1780;Name=kdpE;Dbxref=GeneID:3192093;gbkey=Gene;gene=kdpE;locus_tag=FTT_1735c;pseudo=true
NC_006570.2	RefSeq	gene	1823996	1826677	.	-	.	ID=gene1781;Name=kdpD;Dbxref=GeneID:3192246;gbkey=Gene;gene=kdpD;locus_tag=FTT_1736c
NC_006570.2	RefSeq	CDS	1823996	1826677	.	-	0	ID=cds1552;Name=YP_170635.1;Parent=gene1781;Note=Similar to Q8U9E1 Two component sensor kinase from Agrobacterium tumefaciens %28900 aa%29. FASTA: opt: 1625 Z-score: 1777.7 E%28%29: 3.6e-91 Smith-Waterman score: 1625%3B 32.745 identity in 907 aa overlap;Dbxref=GOA:Q5NEA7,InterPro:IPR014729,UniProtKB%2FTrEMBL:Q5NEA7,Genbank:YP_170635.1,GeneID:3192246;gbkey=CDS;product=two component sensor protein kdpD;protein_id=YP_170635.1;transl_table=11
NC_006570.2	RefSeq	gene	1826781	1827335	.	-	.	ID=gene1782;Name=kdpC;Dbxref=GeneID:3192156;gbkey=Gene;gene=kdpC;locus_tag=FTT_1737c
NC_006570.2	RefSeq	CDS	1826781	1827335	.	-	0	ID=cds1553;Name=YP_170636.1;Parent=gene1782;Note=Similar to Q8R8I7 K%2B-transporting ATPase%2C c chain from Thermoanaerobacter tengcogenesis %28193 aa%29. FASTA: opt: 404 Z-score: 471.4 E%28%29: 2.1e-18 Smith-Waterman score: 404%3B 43.333identity in 180 aa overlap;Dbxref=GOA:Q5NEA6,InterPro:IPR003820,UniProtKB%2FTrEMBL:Q5NEA6,Genbank:YP_170636.1,GeneID:3192156;gbkey=CDS;product=potassium-transporting ATPase subunit C;protein_id=YP_170636.1;transl_table=11
NC_006570.2	RefSeq	gene	1827352	1829391	.	-	.	ID=gene1783;Name=kdpB;Dbxref=GeneID:3192083;gbkey=Gene;gene=kdpB;locus_tag=FTT_1738c
NC_006570.2	RefSeq	CDS	1827352	1829391	.	-	0	ID=cds1554;Name=YP_170637.1;Parent=gene1783;Note=Similar to ATKB_RHIME %28Q92XJ0%29 Potassium-transporting ATPase B chain from Rhizobium meliloti %28680 aa%29. FASTA: opt: 2393 Z-score: 2638.7 E%28%29: 4.4e-139 Smith-Waterman score: 2393%3B 55.490 identity in 683 aa overlap;Dbxref=GOA:Q5NEA5,InterPro:IPR008250,UniProtKB%2FTrEMBL:Q5NEA5,Genbank:YP_170637.1,GeneID:3192083;gbkey=CDS;product=potassium-transporting ATPase subunit B;protein_id=YP_170637.1;transl_table=11
NC_006570.2	RefSeq	gene	1829404	1831003	.	-	.	ID=gene1784;Name=kdpA;Dbxref=GeneID:3192090;gbkey=Gene;gene=kdpA;locus_tag=FTT_1739c;pseudo=true
NC_006570.2	RefSeq	gene	1831020	1831184	.	-	.	ID=gene1785;Name=FTT_1740c;Dbxref=GeneID:8303677;gbkey=Gene;locus_tag=FTT_1740c;pseudo=true
NC_006570.2	RefSeq	gene	1831310	1831750	.	-	.	ID=gene1786;Name=FTT_1741c;Dbxref=GeneID:8303678;gbkey=Gene;locus_tag=FTT_1741c;pseudo=true
NC_006570.2	RefSeq	repeat_region	1831751	1831762	.	-	.	ID=id293;Note=ISFtu1 12bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	gene	1831850	1832634	.	-	.	ID=gene1787;Name=isftu1;Dbxref=GeneID:3190922;gbkey=Gene;gene=isftu1;locus_tag=FTT_1742c
NC_006570.2	RefSeq	CDS	1832308	1832634	.	-	0	ID=cds1555;Name=YP_170649.1;Parent=gene1787;Note=ISFtu1. Transposase%2C member of the IS630 Tc-1 mariner family. Identical to Q93EJ6  transposase from Francisella tularensis %28118 aa%29 from aa 144-261. Identical to Q93EJ7  transposase from Francisella tularensis %28126 aa%29 from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF%27s. ORF1 %28identical to Q93EJ7%29 contains a programmed ribosomal frameshifting motif%2C 5%27-AAAAAAAG-3%27 at aa position 109 which permits frameshifting to ORF2 %28identical to Q93EJ6%29 to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family%2C and also mariner elements%2C show that this transposase shares strongly conserved residues%2C including a fully conserved dipeptide%2CAsp-Glu %28DE%29%2C and a block consisting of a fully conserved Asp and highly conserved Glu%2C separated by 34 or 35 residues %28D35E%29. The conserved dipeptide is only present if ribosomal frameshifting occurs.;Dbxref=UniProtKB%2FTrEMBL:Q5NIH2,Genbank:YP_170649.1,GeneID:3190922;gbkey=CDS;product=transposase;protein_id=YP_170649.1;transl_table=11
NC_006570.2	RefSeq	CDS	1831850	1832308	.	-	0	ID=cds1555;Name=YP_170649.1;Parent=gene1787;Note=ISFtu1. Transposase%2C member of the IS630 Tc-1 mariner family. Identical to Q93EJ6  transposase from Francisella tularensis %28118 aa%29 from aa 144-261. Identical to Q93EJ7  transposase from Francisella tularensis %28126 aa%29 from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF%27s. ORF1 %28identical to Q93EJ7%29 contains a programmed ribosomal frameshifting motif%2C 5%27-AAAAAAAG-3%27 at aa position 109 which permits frameshifting to ORF2 %28identical to Q93EJ6%29 to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family%2C and also mariner elements%2C show that this transposase shares strongly conserved residues%2C including a fully conserved dipeptide%2CAsp-Glu %28DE%29%2C and a block consisting of a fully conserved Asp and highly conserved Glu%2C separated by 34 or 35 residues %28D35E%29. The conserved dipeptide is only present if ribosomal frameshifting occurs.;Dbxref=UniProtKB%2FTrEMBL:Q5NIH2,Genbank:YP_170649.1,GeneID:3190922;gbkey=CDS;product=transposase;protein_id=YP_170649.1;transl_table=11
NC_006570.2	RefSeq	repeat_region	1832655	1832670	.	-	.	ID=id294;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	1832671	1832686	.	-	.	ID=id295;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	1832687	1832698	.	-	.	ID=id296;Note=ISFtu1 12bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	gene	1832700	1833197	.	+	.	ID=gene1788;Name=FTT_1743;Dbxref=GeneID:8303695;gbkey=Gene;locus_tag=FTT_1743;pseudo=true
NC_006570.2	RefSeq	gene	1833371	1835068	.	-	.	ID=gene1789;Name=ipdC;Dbxref=GeneID:3191884;gbkey=Gene;gene=ipdC;locus_tag=FTT_1744c
NC_006570.2	RefSeq	CDS	1833371	1835068	.	-	0	ID=cds1556;Name=YP_170639.1;Parent=gene1789;Note=Similar to Q8TT45 Indolepyruvate decarboxylase Methanosarcina activorans %28550 aa%29. FASTA: opt: 1265 Z-score: 1467.5 E%28%29: 7.6e-74 Smith-Waterman score: 1265%3B 36.909 identity in 550 aa overlap;Dbxref=GOA:Q5NEA3,InterPro:IPR012110,UniProtKB%2FTrEMBL:Q5NEA3,Genbank:YP_170639.1,GeneID:3191884;gbkey=CDS;product=indolepyruvate decarboxylase;protein_id=YP_170639.1;transl_table=11
NC_006570.2	RefSeq	gene	1835322	1835525	.	-	.	ID=gene1790;Name=FTT_1745c;Dbxref=GeneID:8303705;gbkey=Gene;locus_tag=FTT_1745c;pseudo=true
NC_006570.2	RefSeq	gene	1835599	1836522	.	+	.	ID=gene1791;Name=FTT_1746;Dbxref=GeneID:3192539;gbkey=Gene;locus_tag=FTT_1746
NC_006570.2	RefSeq	CDS	1835599	1836522	.	+	0	ID=cds1557;Name=YP_170640.1;Parent=gene1791;Note=Similar to Q87YG1 Signal peptide peptidase SppA%2C 36K type from Pseudomonas syringae %28332 a%29. FASTA: opt: 839 Z-score: 1007.2 E%28%29: 3.3e-48 Smith-Waterman score: 839%3B 46.622 identity in 296 aa overlap ORF ftt1746;Dbxref=GOA:Q5NEA2,InterPro:IPR002142,UniProtKB%2FTrEMBL:Q5NEA2,Genbank:YP_170640.1,GeneID:3192539;gbkey=CDS;product=peptidase;protein_id=YP_170640.1;transl_table=11
NC_006570.2	RefSeq	gene	1836576	1837151	.	+	.	ID=gene1792;Name=FTT_1747;Dbxref=GeneID:3191766;gbkey=Gene;locus_tag=FTT_1747
NC_006570.2	RefSeq	CDS	1836576	1837151	.	+	0	ID=cds1558;Name=YP_170641.1;Parent=gene1792;Note=Similar to AAO90156 %28Q83DT1%29 Outer membrane protein OmpH%2C %2C from Coxiella burnetii %28165 aa%29. FASTA: opt: 175 Z-score: 183.6 E%28%29: 0.022 Smith-Waterman score: 216%3B 26.816 identity in 179 aa overlap ORF ftt1747;Dbxref=GOA:Q5NEA1,InterPro:IPR005632,UniProtKB%2FTrEMBL:Q5NEA1,Genbank:YP_170641.1,GeneID:3191766;gbkey=CDS;product=hypothetical protein;protein_id=YP_170641.1;transl_table=11
NC_006570.2	RefSeq	gene	1837287	1837709	.	+	.	ID=gene1793;Name=glpe;Dbxref=GeneID:3190942;gbkey=Gene;gene=glpe;locus_tag=FTT_1748
NC_006570.2	RefSeq	CDS	1837287	1837709	.	+	0	ID=cds1559;Name=YP_170642.1;Parent=gene1793;Note=Similar to AAO91018 %28Q83BI7%29 Rhodanese domain protein Coxiella burnetii %28144 aa%29. FASTA: opt: 279 Z-score: 342.5 E%28%29: 3.5e-11 Smith-Waterman score: 279%3B 33.094 identity in 139 aa overlap;Dbxref=GOA:Q5NEA0,InterPro:IPR001763,UniProtKB%2FTrEMBL:Q5NEA0,Genbank:YP_170642.1,GeneID:3190942;gbkey=CDS;product=thiosulfate sulfurtransferase;protein_id=YP_170642.1;transl_table=11
NC_006570.2	RefSeq	gene	1837736	1838185	.	+	.	ID=gene1794;Name=secB1;Dbxref=GeneID:3191208;gbkey=Gene;gene=secB1;locus_tag=FTT_1749
NC_006570.2	RefSeq	CDS	1837736	1838185	.	+	0	ID=cds1560;Name=YP_170643.1;Parent=gene1794;Note=molecular chaperone that is required for the normal export of envelope proteins out of the cell cytoplasm%3B in Escherichia coli this proteins forms a homotetramer in the cytoplasm and delivers proteins to be exported to SecA;Dbxref=GOA:Q5NE99,InterPro:IPR003708,UniProtKB%2FSwiss-Prot:Q5NE99,Genbank:YP_170643.1,GeneID:3191208;gbkey=CDS;product=preprotein translocase subunit SecB;protein_id=YP_170643.1;transl_table=11
NC_006570.2	RefSeq	gene	1838207	1839286	.	+	.	ID=gene1795;Name=recA;Dbxref=GeneID:3191643;gbkey=Gene;gene=recA;locus_tag=FTT_1750
NC_006570.2	RefSeq	CDS	1838207	1839286	.	+	0	ID=cds1561;Name=YP_170644.1;Parent=gene1795;Note=catalyzes the hydrolysis of ATP in the presence of single-stranded DNA%2C the ATP-dependent uptake of single-stranded DNA by duplex DNA%2C and the ATP-dependent hybridization of homologous single-stranded DNAs;Dbxref=GOA:Q5NE98,InterPro:IPR013765,UniProtKB%2FSwiss-Prot:Q5NE98,Genbank:YP_170644.1,GeneID:3191643;gbkey=CDS;product=recombinase A;protein_id=YP_170644.1;transl_table=11
NC_006570.2	RefSeq	gene	1839273	1839725	.	+	.	ID=gene1796;Name=recX;Dbxref=GeneID:3191633;gbkey=Gene;gene=recX;locus_tag=FTT_1751
NC_006570.2	RefSeq	CDS	1839273	1839725	.	+	0	ID=cds1562;Name=YP_170645.1;Parent=gene1796;Note=Similar to RECX_HAEIN %28P43706%29 Regulatory protein recX from Haemophilus influenzae %28126 aa%29. FASTA: opt: 243 Z-score: 314.3 E%28%29: 1.3e-09 Smith-Waterman score: 243%3B 31.967 identity in 122 aa overlap;Dbxref=GOA:Q5NE97,InterPro:IPR003783,UniProtKB%2FTrEMBL:Q5NE97,Genbank:YP_170645.1,GeneID:3191633;gbkey=CDS;product=regulatory protein recX;protein_id=YP_170645.1;transl_table=11
NC_006570.2	RefSeq	gene	1839898	1840374	.	+	.	ID=gene1797;Name=ssb;Dbxref=GeneID:3190727;gbkey=Gene;gene=ssb;locus_tag=FTT_1752
NC_006570.2	RefSeq	CDS	1839898	1840374	.	+	0	ID=cds1563;Name=YP_170646.1;Parent=gene1797;Note=Similar to SSB_HAEIN P44409 Single-strand binding protein %28SSB%29 from Haemophilus influenzae %28168 aa%29. FASTA: opt: 437 Z-score: 543.8 E%28%29: 1.9e-22 Smith-Waterman score: 437%3B 44.578identity in 166 aa overlap;Dbxref=GOA:Q5NE96,InterPro:IPR012340,UniProtKB%2FTrEMBL:Q5NE96,Genbank:YP_170646.1,GeneID:3190727;gbkey=CDS;product=single-strand binding protein;protein_id=YP_170646.1;transl_table=11
NC_006570.2	RefSeq	gene	1840480	1841634	.	+	.	ID=gene1798;Name=tdcD;Dbxref=GeneID:3190747;gbkey=Gene;gene=tdcD;locus_tag=FTT_1753
NC_006570.2	RefSeq	CDS	1840480	1841634	.	+	0	ID=cds1564;Name=YP_170647.1;Parent=gene1798;Note=Similar to ACKA_CLOTS %28Q59331%29 Acetate kinase %28Acetokinase%29 from Clostridium thermosaccharolyticum %28400 aa%29. FASTA: opt: 1204 Z-score: 1394.5 E%28%29: 8e-70 Smith-Waterman score: 1204%3B 49.873 identity in 395 aa overlap;Dbxref=GOA:Q5NE95,InterPro:IPR004372,UniProtKB%2FTrEMBL:Q5NE95,Genbank:YP_170647.1,GeneID:3190747;gbkey=CDS;product=propionate kinase;protein_id=YP_170647.1;transl_table=11
NC_006570.2	RefSeq	gene	1841644	1843740	.	+	.	ID=gene1799;Name=pta;Dbxref=GeneID:3191229;gbkey=Gene;gene=pta;locus_tag=FTT_1754
NC_006570.2	RefSeq	CDS	1841644	1843740	.	+	0	ID=cds1565;Name=YP_170648.1;Parent=gene1799;Note=catalyzes the synthesis of acetylphosphate or propionylphosphate from acetyl-CoA or propionyl-CoA and inorganic phosphate%3B when using propionyl-CoA the enzyme is functioning in the anaerobic pathway catabolizing threonine to propionate;Dbxref=GOA:Q5NE94,InterPro:IPR016475,UniProtKB%2FTrEMBL:Q5NE94,Genbank:YP_170648.1,GeneID:3191229;gbkey=CDS;product=phosphate acetyltransferase;protein_id=YP_170648.1;transl_table=11
NC_006570.2	RefSeq	gene	1843755	1844671	.	+	.	ID=gene1800;Name=gabD2;Dbxref=GeneID:3191582;gbkey=Gene;gene=gabD2;locus_tag=FTT_1755;pseudo=true
NC_006570.2	RefSeq	repeat_region	1844649	1844660	.	-	.	ID=id297;Note=ISFtu1 12bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	gene	1844748	1845532	.	-	.	ID=gene1801;Name=isftu1;Dbxref=GeneID:3191804;gbkey=Gene;gene=isftu1;locus_tag=FTT_1756c
NC_006570.2	RefSeq	CDS	1845206	1845532	.	-	0	ID=cds1566;Name=YP_170668.1;Parent=gene1801;Note=ISFtu1. Transposase%2C member of the IS630 Tc-1 mariner family. Identical to Q93EJ6  transposase from Francisella tularensis %28118 aa%29 from aa 144-261. Identical to Q93EJ7  transposase from Francisella tularensis %28126 aa%29 from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF%27s. ORF1 %28identical to Q93EJ7%29 contains a programmed ribosomal frameshifting motif%2C 5%27-AAAAAAAG-3%27 at aa position 109 which permits frameshifting to ORF2 %28identical to Q93EJ6%29 to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family%2C and also mariner elements%2C show that this transposase shares strongly conserved residues%2C including a fully conserved dipeptide%2CAsp-Glu %28DE%29%2C and a block consisting of a fully conserved Asp and highly conserved Glu%2C separated by 34 or 35 residues %28D35E%29. The conserved dipeptide is only present if ribosomal frameshifting occurs.;Dbxref=UniProtKB%2FTrEMBL:Q5NIH2,Genbank:YP_170668.1,GeneID:3191804;gbkey=CDS;product=transposase;protein_id=YP_170668.1;transl_table=11
NC_006570.2	RefSeq	CDS	1844748	1845206	.	-	0	ID=cds1566;Name=YP_170668.1;Parent=gene1801;Note=ISFtu1. Transposase%2C member of the IS630 Tc-1 mariner family. Identical to Q93EJ6  transposase from Francisella tularensis %28118 aa%29 from aa 144-261. Identical to Q93EJ7  transposase from Francisella tularensis %28126 aa%29 from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF%27s. ORF1 %28identical to Q93EJ7%29 contains a programmed ribosomal frameshifting motif%2C 5%27-AAAAAAAG-3%27 at aa position 109 which permits frameshifting to ORF2 %28identical to Q93EJ6%29 to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family%2C and also mariner elements%2C show that this transposase shares strongly conserved residues%2C including a fully conserved dipeptide%2CAsp-Glu %28DE%29%2C and a block consisting of a fully conserved Asp and highly conserved Glu%2C separated by 34 or 35 residues %28D35E%29. The conserved dipeptide is only present if ribosomal frameshifting occurs.;Dbxref=UniProtKB%2FTrEMBL:Q5NIH2,Genbank:YP_170668.1,GeneID:3191804;gbkey=CDS;product=transposase;protein_id=YP_170668.1;transl_table=11
NC_006570.2	RefSeq	repeat_region	1845553	1845568	.	-	.	ID=id298;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	1845569	1845584	.	-	.	ID=id299;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	1845585	1845596	.	-	.	ID=id300;Note=ISFtu1 12bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	gene	1845684	1846939	.	-	.	ID=gene1802;Name=FTT_1757c;Dbxref=GeneID:3190929;gbkey=Gene;locus_tag=FTT_1757c;pseudo=true
NC_006570.2	RefSeq	gene	1846969	1847562	.	-	.	ID=gene1803;Name=FTT_1758c;Dbxref=GeneID:3190935;gbkey=Gene;locus_tag=FTT_1758c
NC_006570.2	RefSeq	CDS	1846969	1847562	.	-	0	ID=cds1567;Name=YP_170650.1;Parent=gene1803;Note=Similar to Q8D0W2  cytochrome from Yersinia pestis %28199 aa%29. FASTA: opt: 273 Z-score: 328.7 E%28%29: 1.9e-10 Smith-Waterman score: 273%3B 27.979identity in 193 aa overlap ORF ftt1758c;Dbxref=GOA:Q5NE92,InterPro:IPR011577,UniProtKB%2FTrEMBL:Q5NE92,Genbank:YP_170650.1,GeneID:3190935;gbkey=CDS;product=B-type cytochrome;protein_id=YP_170650.1;transl_table=11
NC_006570.2	RefSeq	gene	1847547	1848436	.	-	.	ID=gene1804;Name=FTT_1759c;Dbxref=GeneID:3190930;gbkey=Gene;locus_tag=FTT_1759c;pseudo=true
NC_006570.2	RefSeq	gene	1848530	1849681	.	+	.	ID=gene1805;Name=nhaA;Dbxref=GeneID:3191689;gbkey=Gene;gene=nhaA;locus_tag=FTT_1760
NC_006570.2	RefSeq	CDS	1848530	1849681	.	+	0	ID=cds1568;Name=YP_170651.1;Parent=gene1805;Note=exports sodium by using the electrochemical proton gradient to allow protons into the cell%3B functions in adaptation to high salinity and alkaline pH%3B activity increases at higher pH%3B downregulated at acidic pH;Dbxref=GOA:Q5NE91,InterPro:IPR004670,UniProtKB%2FSwiss-Prot:Q5NE91,Genbank:YP_170651.1,GeneID:3191689;gbkey=CDS;product=pH-dependent sodium%2Fproton antiporter;protein_id=YP_170651.1;transl_table=11
NC_006570.2	RefSeq	gene	1849746	1850465	.	+	.	ID=gene1806;Name=FTT_1761;Dbxref=GeneID:3191889;gbkey=Gene;locus_tag=FTT_1761
NC_006570.2	RefSeq	CDS	1849746	1850465	.	+	0	ID=cds1569;Name=YP_170652.1;Parent=gene1806;Note=Similar to YAFD_ECOLI %28P30865%29 Hypothetical protein yafD from E. coli %28266 aa%29. FASTA: opt: 320 Z-score: 403.2 E%28%29: 1.5e-14 Smith-Waterman score: 320%3B 34.498 identity in 229 aa overlap ORF ftt1761;Dbxref=InterPro:IPR005135,UniProtKB%2FTrEMBL:Q5NE90,Genbank:YP_170652.1,GeneID:3191889;gbkey=CDS;product=hypothetical protein;protein_id=YP_170652.1;transl_table=11
NC_006570.2	RefSeq	gene	1850471	1851211	.	-	.	ID=gene1807;Name=FTT_1762c;Dbxref=GeneID:3190934;gbkey=Gene;locus_tag=FTT_1762c
NC_006570.2	RefSeq	CDS	1850471	1851211	.	-	0	ID=cds1570;Name=YP_170653.1;Parent=gene1807;Note=Similar to Q9F728  N-acylhomoserine lactone synthase from Pseudomonas fluorescens %28259 aa%29. FASTA: opt: 408 Z-score: 521.4 E%28%29: 3.8e-21 Smith-Waterman score: 408%3B 34.498 identity in 229 aa overlap ORF ftt1762c;Dbxref=GOA:Q5NE89,InterPro:IPR002123,UniProtKB%2FTrEMBL:Q5NE89,Genbank:YP_170653.1,GeneID:3190934;gbkey=CDS;product=acetyltransferase protein;protein_id=YP_170653.1;transl_table=11
NC_006570.2	RefSeq	gene	1851225	1851977	.	-	.	ID=gene1808;Name=FTT_1763c;Dbxref=GeneID:3190865;gbkey=Gene;locus_tag=FTT_1763c
NC_006570.2	RefSeq	CDS	1851225	1851977	.	-	0	ID=cds1571;Name=YP_170654.1;Parent=gene1808;Note=Similar to Q9F728  N-acylhomoserine lactone syntase from Pseudomonas fluorescens %28259 aa%29. FASTA: opt: 442 Z-score: 546.9 E%28%29: 1.4e-22 Smith-Waterman score: 442%3B 37.963 identity in 216 aa overlap. ORF ftt1763c;Dbxref=GOA:Q5NE88,InterPro:IPR002123,UniProtKB%2FTrEMBL:Q5NE88,Genbank:YP_170654.1,GeneID:3190865;gbkey=CDS;product=acetyltransferase protein;protein_id=YP_170654.1;transl_table=11
NC_006570.2	RefSeq	gene	1852140	1852463	.	-	.	ID=gene1809;Name=FTT_1764c;Dbxref=GeneID:3190855;gbkey=Gene;locus_tag=FTT_1764c
NC_006570.2	RefSeq	CDS	1852140	1852463	.	-	0	ID=cds1572;Name=YP_170655.1;Parent=gene1809;Note=Similar to FER_PSEST %28P08811%29 Ferredoxin from Pseudomonas stutzeri %28106 aa%29. FASTA: opt: 535 Z-score: 674.6 E%28%29: 1.1e-29 Smith-Waterman score: 535%3B 65.714identity in 105 aa overlap ORF ftt1764c;Dbxref=GOA:Q5NE87,InterPro:IPR017900,UniProtKB%2FTrEMBL:Q5NE87,Genbank:YP_170655.1,GeneID:3190855;gbkey=CDS;product=ferredoxin;protein_id=YP_170655.1;transl_table=11
NC_006570.2	RefSeq	gene	1852683	1853336	.	+	.	ID=gene1810;Name=FTT_1765;Dbxref=GeneID:3190854;gbkey=Gene;locus_tag=FTT_1765
NC_006570.2	RefSeq	CDS	1852683	1853336	.	+	0	ID=cds1573;Name=YP_170656.1;Parent=gene1810;Note=ORF ftt1765;Dbxref=UniProtKB%2FTrEMBL:Q5NE86,Genbank:YP_170656.1,GeneID:3190854;gbkey=CDS;product=hypothetical protein;protein_id=YP_170656.1;transl_table=11
NC_006570.2	RefSeq	gene	1853414	1854070	.	+	.	ID=gene1811;Name=FTT_1766;Dbxref=GeneID:3190939;gbkey=Gene;locus_tag=FTT_1766
NC_006570.2	RefSeq	CDS	1853414	1854070	.	+	0	ID=cds1574;Name=YP_170657.1;Parent=gene1811;Note=Similar to Q8YLW7 O-methyltransferase from Anabaena sp. %28220 aa%29. FASTA: opt: 622 Z-score: 791.6 E%28%29: 3.4e-36 Smith-Waterman score: 622%3B 43.836identity in 219 aa overlap ORF ftt1766;Dbxref=GOA:Q5NE85,InterPro:IPR002935,UniProtKB%2FTrEMBL:Q5NE85,Genbank:YP_170657.1,GeneID:3190939;gbkey=CDS;product=O-methyltransferase;protein_id=YP_170657.1;transl_table=11
NC_006570.2	RefSeq	gene	1854072	1855232	.	-	.	ID=gene1812;Name=purT;Dbxref=GeneID:3191662;gbkey=Gene;gene=purT;locus_tag=FTT_1767c
NC_006570.2	RefSeq	CDS	1854072	1855232	.	-	0	ID=cds1575;Name=YP_170658.1;Parent=gene1812;Note=non-folate utilizing enzyme%2C catalyzes the production of beta-formyl glycinamide ribonucleotide from formate%2C ATP%2C and beta-GAR and a side reaction producing acetyl phosphate and ADP from acetate and ATP%3B involved in de novo purine biosynthesis;Dbxref=GOA:Q5NE84,InterPro:IPR013817,UniProtKB%2FSwiss-Prot:Q5NE84,Genbank:YP_170658.1,GeneID:3191662;gbkey=CDS;product=phosphoribosylglycinamide formyltransferase 2;protein_id=YP_170658.1;transl_table=11
NC_006570.2	RefSeq	gene	1855286	1857106	.	-	.	ID=gene1813;Name=FTT_1768c;Dbxref=GeneID:3190860;gbkey=Gene;locus_tag=FTT_1768c
NC_006570.2	RefSeq	CDS	1855286	1857106	.	-	0	ID=cds1576;Name=YP_170659.1;Parent=gene1813;Note=Similar to Q9KQP6 Chitinase from Vibrio cholerae %28846 aa%29. FASTA: opt: 242 Z-score: 272.3 E%28%29: 2.8e-07 Smith-Waterman score: 279%3B 21.309 identity in 718 aa overlap. ORF ftt1768c;Dbxref=GOA:Q5NE83,InterPro:IPR013781,UniProtKB%2FTrEMBL:Q5NE83,Genbank:YP_170659.1,GeneID:3190860;gbkey=CDS;product=chitinase;protein_id=YP_170659.1;transl_table=11
NC_006570.2	RefSeq	gene	1857728	1860307	.	-	.	ID=gene1814;Name=clpB;Dbxref=GeneID:3192509;gbkey=Gene;gene=clpB;locus_tag=FTT_1769c
NC_006570.2	RefSeq	CDS	1857728	1860307	.	-	0	ID=cds1577;Name=YP_170660.1;Parent=gene1814;Note=Similar to FASTA: AAO89660 %28Q83F55%29 ClpB protein from Coxiella burnetii %28859 aa%29. FASTA: opt: 3593 Z-score: 3223.6 E%28%29: 1.1e-171 Smith-Waterman score: 3593%3B 65.357 identity in 840 aa overlap;Dbxref=GOA:Q5NE82,InterPro:IPR018368,UniProtKB%2FTrEMBL:Q5NE82,Genbank:YP_170660.1,GeneID:3192509;gbkey=CDS;product=ClpB protein;protein_id=YP_170660.1;transl_table=11
NC_006570.2	RefSeq	gene	1860527	1861234	.	+	.	ID=gene1815;Name=FTT_1770;Dbxref=GeneID:3191228;gbkey=Gene;locus_tag=FTT_1770;pseudo=true
NC_006570.2	RefSeq	gene	1861326	1861679	.	+	.	ID=gene1816;Name=FTT_1771;Dbxref=GeneID:3192304;gbkey=Gene;locus_tag=FTT_1771
NC_006570.2	RefSeq	CDS	1861326	1861679	.	+	0	ID=cds1578;Name=YP_170661.1;Parent=gene1816;Note=ORF ftt1771;Dbxref=UniProtKB%2FTrEMBL:Q5NE81,Genbank:YP_170661.1,GeneID:3192304;gbkey=CDS;product=hypothetical protein;protein_id=YP_170661.1;transl_table=11
NC_006570.2	RefSeq	gene	1861734	1862543	.	-	.	ID=gene1817;Name=trpA;Dbxref=GeneID:3190980;gbkey=Gene;gene=trpA;locus_tag=FTT_1772c
NC_006570.2	RefSeq	CDS	1861734	1862543	.	-	0	ID=cds1579;Name=YP_170662.1;Parent=gene1817;Note=catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis;Dbxref=GOA:Q5NE80,InterPro:IPR018204,UniProtKB%2FSwiss-Prot:Q5NE80,Genbank:YP_170662.1,GeneID:3190980;gbkey=CDS;product=tryptophan synthase subunit alpha;protein_id=YP_170662.1;transl_table=11
NC_006570.2	RefSeq	gene	1862543	1863733	.	-	.	ID=gene1818;Name=trpB;Dbxref=GeneID:3190984;gbkey=Gene;gene=trpB;locus_tag=FTT_1773c
NC_006570.2	RefSeq	CDS	1862543	1863733	.	-	0	ID=cds1580;Name=YP_170663.1;Parent=gene1818;Note=catalyzes the formation of L-tryptophan from L-serine and 1-%28indol-3-yl%29glycerol 3-phosphate;Dbxref=GOA:Q5NE79,InterPro:IPR006654,UniProtKB%2FSwiss-Prot:Q5NE79,Genbank:YP_170663.1,GeneID:3190984;gbkey=CDS;product=tryptophan synthase subunit beta;protein_id=YP_170663.1;transl_table=11
NC_006570.2	RefSeq	gene	1863820	1865148	.	-	.	ID=gene1819;Name=FTT_1774c;Dbxref=GeneID:3192295;gbkey=Gene;locus_tag=FTT_1774c;pseudo=true
NC_006570.2	RefSeq	gene	1865149	1866678	.	-	.	ID=gene1820;Name=clcA;Dbxref=GeneID:3191542;gbkey=Gene;gene=clcA;locus_tag=FTT_1775c
NC_006570.2	RefSeq	CDS	1865149	1866678	.	-	0	ID=cds1581;Name=YP_170664.1;Parent=gene1820;Note=Similar to CLCA_ECOLI %28P37019%29 Voltage-gated ClC-type chloride channel from E. coli %28473 aa%29. FASTA: opt: 1120 Z-score: 1211.7 E%28%29: 1.3e-59 Smith-Waterman score: 1120%3B 39.545 identity in 440 aa overlap;Dbxref=GOA:Q5NE78,InterPro:IPR014743,UniProtKB%2FTrEMBL:Q5NE78,Genbank:YP_170664.1,GeneID:3191542;gbkey=CDS;product=Voltage-gated ClC-type chloride channel clcA;protein_id=YP_170664.1;transl_table=11
NC_006570.2	RefSeq	gene	1866749	1867147	.	-	.	ID=gene1821;Name=FTT_1776c;Dbxref=GeneID:3190853;gbkey=Gene;locus_tag=FTT_1776c
NC_006570.2	RefSeq	CDS	1866749	1867147	.	-	0	ID=cds1582;Name=YP_170665.1;Parent=gene1821;Note=ORF ftt1776c;Dbxref=UniProtKB%2FTrEMBL:Q5NE77,Genbank:YP_170665.1,GeneID:3190853;gbkey=CDS;product=hypothetical protein;protein_id=YP_170665.1;transl_table=11
NC_006570.2	RefSeq	gene	1867150	1867560	.	-	.	ID=gene1822;Name=FTT_1777c;Dbxref=GeneID:3192294;gbkey=Gene;locus_tag=FTT_1777c
NC_006570.2	RefSeq	CDS	1867150	1867560	.	-	0	ID=cds1583;Name=YP_170666.1;Parent=gene1822;Note=ORF ftt1777c;Dbxref=UniProtKB%2FTrEMBL:Q5NE76,Genbank:YP_170666.1,GeneID:3192294;gbkey=CDS;product=hypothetical protein;protein_id=YP_170666.1;transl_table=11
NC_006570.2	RefSeq	gene	1867581	1867973	.	-	.	ID=gene1823;Name=FTT_1778c;Dbxref=GeneID:3190801;gbkey=Gene;locus_tag=FTT_1778c
NC_006570.2	RefSeq	CDS	1867581	1867973	.	-	0	ID=cds1584;Name=YP_170667.1;Parent=gene1823;Note=ORF ftt1778c;Dbxref=UniProtKB%2FTrEMBL:Q5NE75,Genbank:YP_170667.1,GeneID:3190801;gbkey=CDS;product=hypothetical protein;protein_id=YP_170667.1;transl_table=11
NC_006570.2	RefSeq	gene	1868146	1868747	.	+	.	ID=gene1824;Name=FTT_1779;Dbxref=GeneID:8303685;gbkey=Gene;locus_tag=FTT_1779;pseudo=true
NC_006570.2	RefSeq	repeat_region	1868710	1868721	.	+	.	ID=id301;Note=ISFtu1 12bp terminal inverted repeat;Dbxref=GeneID:8303685;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	1868722	1868737	.	+	.	ID=id302;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;Dbxref=GeneID:8303685;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	1868738	1868753	.	+	.	ID=id303;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	1868754	1868769	.	+	.	ID=id304;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;gbkey=repeat_region
NC_006570.2	RefSeq	repeat_region	1868770	1868785	.	+	.	ID=id305;Note=16bp Short Sequence Tandem Repeat %28SSTR%29;gbkey=repeat_region
NC_006570.2	RefSeq	gene	1868806	1869590	.	+	.	ID=gene1825;Name=isftu1;Dbxref=GeneID:3190923;gbkey=Gene;gene=isftu1;locus_tag=FTT_1780
NC_006570.2	RefSeq	CDS	1868806	1869132	.	+	0	ID=cds1585;Name=YP_003097807.1;Parent=gene1825;Note=ISFtu1. Transposase%2C member of the IS630 Tc-1 mariner family. Identical to Q93EJ6  transposase from Francisella tularensis %28118 aa%29 from aa 144-261. Identical to Q93EJ7  transposase from Francisella tularensis %28126 aa%29 from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF%27s. ORF1 %28identical to Q93EJ7%29 contains a programmed ribosomal frameshifting motif%2C 5%27-AAAAAAAG-3%27 at aa position 109 which permits frameshifting to ORF2 %28identical to Q93EJ6%29 to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family%2C and also mariner elements%2C show that this transposase shares strongly conserved residues%2C including a fully conserved dipeptide%2CAsp-Glu %28DE%29%2C and a block consisting of a fully conserved Asp and highly conserved Glu%2C separated by 34 or 35 residues %28D35E%29. The conserved dipeptide is only present if ribosomal frameshifting occurs.;Dbxref=Genbank:YP_003097807.1,GeneID:3190923;gbkey=CDS;product=transposase;protein_id=YP_003097807.1;transl_table=11
NC_006570.2	RefSeq	CDS	1869132	1869590	.	+	0	ID=cds1585;Name=YP_003097807.1;Parent=gene1825;Note=ISFtu1. Transposase%2C member of the IS630 Tc-1 mariner family. Identical to Q93EJ6  transposase from Francisella tularensis %28118 aa%29 from aa 144-261. Identical to Q93EJ7  transposase from Francisella tularensis %28126 aa%29 from aa 1-109. Q93EJ6 and Q93EJ7 previously characterised as two separate ORF%27s. ORF1 %28identical to Q93EJ7%29 contains a programmed ribosomal frameshifting motif%2C 5%27-AAAAAAAG-3%27 at aa position 109 which permits frameshifting to ORF2 %28identical to Q93EJ6%29 to produce a single ORF. Alignment of this single ORF with additional members of the IS630 family%2C and also mariner elements%2C show that this transposase shares strongly conserved residues%2C including a fully conserved dipeptide%2CAsp-Glu %28DE%29%2C and a block consisting of a fully conserved Asp and highly conserved Glu%2C separated by 34 or 35 residues %28D35E%29. The conserved dipeptide is only present if ribosomal frameshifting occurs.;Dbxref=Genbank:YP_003097807.1,GeneID:3190923;gbkey=CDS;product=transposase;protein_id=YP_003097807.1;transl_table=11
NC_006570.2	RefSeq	repeat_region	1869678	1869689	.	+	.	ID=id306;Note=ISFtu1 12bp terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	gene	1869829	1870578	.	-	.	ID=gene1826;Name=FTT_1781c;Dbxref=GeneID:3190804;gbkey=Gene;locus_tag=FTT_1781c
NC_006570.2	RefSeq	CDS	1869829	1870578	.	-	0	ID=cds1586;Name=YP_170669.1;Parent=gene1826;Note=ORF ftt1781c;Dbxref=GOA:Q5NE73,InterPro:IPR013216,UniProtKB%2FTrEMBL:Q5NE73,Genbank:YP_170669.1,GeneID:3190804;gbkey=CDS;product=hypothetical protein;protein_id=YP_170669.1;transl_table=11
NC_006570.2	RefSeq	gene	1870520	1872199	.	-	.	ID=gene1827;Name=yjjK;Dbxref=GeneID:3192393;gbkey=Gene;gene=yjjK;locus_tag=FTT_1782c
NC_006570.2	RefSeq	CDS	1870520	1872199	.	-	0	ID=cds1587;Name=YP_170670.1;Parent=gene1827;Note=ChvD%3B in Agrobacterium tumefaciens%2C mutations in both Walker boxes were found to affect virulence;Dbxref=GOA:Q5NE72,InterPro:IPR017871,UniProtKB%2FTrEMBL:Q5NE72,Genbank:YP_170670.1,GeneID:3192393;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=YP_170670.1;transl_table=11
NC_006570.2	RefSeq	gene	1872367	1873653	.	+	.	ID=gene1828;Name=FTT_1783;Dbxref=GeneID:3190882;gbkey=Gene;locus_tag=FTT_1783
NC_006570.2	RefSeq	CDS	1872367	1873653	.	+	0	ID=cds1588;Name=YP_170671.1;Parent=gene1828;Note=Similar to Q83A52 Major facilitator family transporter from Coxiella burnetii %28443 aa%29. FASTA: opt: 751 Z-score: 809.6 E%28%29: 3.3e-37 Smith-Waterman score: 751%3B 34.204identity in 421 aa overlap ORF ftt1783;Dbxref=GOA:Q5NE71,InterPro:IPR005828,UniProtKB%2FTrEMBL:Q5NE71,Genbank:YP_170671.1,GeneID:3190882;gbkey=CDS;product=major facilitator transporter;protein_id=YP_170671.1;transl_table=11
NC_006570.2	RefSeq	gene	1873634	1873942	.	-	.	ID=gene1829;Name=FTT_1784c;Dbxref=GeneID:3191772;gbkey=Gene;locus_tag=FTT_1784c
NC_006570.2	RefSeq	CDS	1873634	1873942	.	-	0	ID=cds1589;Name=YP_170672.1;Parent=gene1829;Note=ORF ftt1784c;Dbxref=UniProtKB%2FTrEMBL:Q5NE70,Genbank:YP_170672.1,GeneID:3191772;gbkey=CDS;product=hypothetical protein;protein_id=YP_170672.1;transl_table=11
NC_006570.2	RefSeq	gene	1873954	1874166	.	-	.	ID=gene1830;Name=FTT_1785c;Dbxref=GeneID:3191779;gbkey=Gene;locus_tag=FTT_1785c
NC_006570.2	RefSeq	CDS	1873954	1874166	.	-	0	ID=cds1590;Name=YP_170673.1;Parent=gene1830;Note=ORF ftt1785c;Dbxref=UniProtKB%2FTrEMBL:Q5NE69,Genbank:YP_170673.1,GeneID:3191779;gbkey=CDS;product=hypothetical protein;protein_id=YP_170673.1;transl_table=11
NC_006570.2	RefSeq	gene	1874212	1875190	.	+	.	ID=gene1831;Name=FTT_1786;Dbxref=GeneID:3191781;gbkey=Gene;locus_tag=FTT_1786;pseudo=true
NC_006570.2	RefSeq	gene	1875200	1875811	.	-	.	ID=gene1832;Name=FTT_1787c;Dbxref=GeneID:3191282;gbkey=Gene;locus_tag=FTT_1787c
NC_006570.2	RefSeq	CDS	1875200	1875811	.	-	0	ID=cds1591;Name=YP_170674.1;Parent=gene1832;Note=Similar to Q8UGV8 LysE family transporter from Agrobactium tumifaciens %28202 aa%29. FASTA: opt: 346 Z-score: 414.9 E%28%29: 3.2e-15 Smith-Waterman score: 346%3B 30.102 identity in 196 aa overlap ORF ftt1787c;Dbxref=GOA:Q5NE68,InterPro:IPR001123,UniProtKB%2FTrEMBL:Q5NE68,Genbank:YP_170674.1,GeneID:3191282;gbkey=CDS;product=amino acid transporter LysE;protein_id=YP_170674.1;transl_table=11
NC_006570.2	RefSeq	gene	1875917	1876833	.	+	.	ID=gene1833;Name=iciA;Dbxref=GeneID:3191418;gbkey=Gene;gene=iciA;locus_tag=FTT_1788;pseudo=true
NC_006570.2	RefSeq	gene	1877112	1877906	.	+	.	ID=gene1834;Name=FTT_1789;Dbxref=GeneID:3191776;gbkey=Gene;locus_tag=FTT_1789
NC_006570.2	RefSeq	CDS	1877112	1877906	.	+	0	ID=cds1592;Name=YP_170675.1;Parent=gene1834;Note=Similar to Q83C04 Membrane protein%2C %2C from Coxiella burnetii %28263 aa%29. FASTA: opt: 496 Z-score: 540.4 E%28%29: 3.3e-22 Smith-Waterman score: 496%3B 30.038 identity in 263 aa overlap ORF ftt1789;Dbxref=GOA:Q5NE67,InterPro:IPR002781,UniProtKB%2FTrEMBL:Q5NE67,Genbank:YP_170675.1,GeneID:3191776;gbkey=CDS;product=hypothetical protein;protein_id=YP_170675.1;transl_table=11
NC_006570.2	RefSeq	gene	1877952	1878251	.	-	.	ID=gene1835;Name=FTT_1790c;Dbxref=GeneID:8303699;gbkey=Gene;locus_tag=FTT_1790c;pseudo=true
NC_006570.2	RefSeq	gene	1878315	1878677	.	+	.	ID=gene1836;Name=FTT_1791;Dbxref=GeneID:3191780;gbkey=Gene;locus_tag=FTT_1791
NC_006570.2	RefSeq	CDS	1878315	1878677	.	+	0	ID=cds1593;Name=YP_170676.1;Parent=gene1836;Note=ORF ftt1791;Dbxref=UniProtKB%2FTrEMBL:Q5NE66,Genbank:YP_170676.1,GeneID:3191780;gbkey=CDS;product=hypothetical protein;protein_id=YP_170676.1;transl_table=11
NC_006570.2	RefSeq	repeat_region	1879048	1879065	.	-	.	ID=id307;Note=18 bp ISFtu3 terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	gene	1879053	1879736	.	-	.	ID=gene1837;Name=FTT_1792c;Dbxref=GeneID:3191785;gbkey=Gene;locus_tag=FTT_1792c;pseudo=true
NC_006570.2	RefSeq	repeat_region	1879774	1879791	.	-	.	ID=id308;Note=18 bp ISFtu3 terminal inverted repeat;gbkey=repeat_region
NC_006570.2	RefSeq	gene	1879809	1882403	.	-	.	ID=gene1838;Name=pepN;Dbxref=GeneID:3191327;gbkey=Gene;gene=pepN;locus_tag=FTT_1793c
NC_006570.2	RefSeq	CDS	1879809	1882403	.	-	0	ID=cds1594;Name=YP_170677.1;Parent=gene1838;Note=Similar to AMPN_ECOLI %28P04825%29 Aminopeptidase N from E. coli %28869 aa%29. FASTA: opt: 2226 Z-score: 2532.9 E%28%29: 3.4e-133 Smith-Waterman score: 2751%3B 48.856identity in 874 aa overlap;Dbxref=GOA:Q5NE65,InterPro:IPR014782,UniProtKB%2FTrEMBL:Q5NE65,Genbank:YP_170677.1,GeneID:3191327;gbkey=CDS;product=aminopeptidase;protein_id=YP_170677.1;transl_table=11
NC_006570.2	RefSeq	gene	1882587	1883015	.	+	.	ID=gene1839;Name=FTT_1794;Dbxref=GeneID:3192536;gbkey=Gene;locus_tag=FTT_1794
NC_006570.2	RefSeq	CDS	1882587	1883015	.	+	0	ID=cds1595;Name=YP_170678.1;Parent=gene1839;Note=Similar to Q9WYK7 Heat shock protein%2C class I from Thermatoga maritima %28147 aa%29. FASTA: opt: 288 Z-score: 346.4 E%28%29: 2.1e-11 Smith-Waterman score: 288%3B 37.879 identity in 132 aa overlap ORF ftt1794;Dbxref=GOA:Q5NE64,InterPro:IPR002068,UniProtKB%2FTrEMBL:Q5NE64,Genbank:YP_170678.1,GeneID:3192536;gbkey=CDS;product=heat shock protein;protein_id=YP_170678.1;transl_table=11
NC_006570.2	RefSeq	gene	1883012	1884373	.	-	.	ID=gene1840;Name=trpC;Dbxref=GeneID:3190977;gbkey=Gene;gene=trpC;locus_tag=FTT_1795c
NC_006570.2	RefSeq	CDS	1883012	1884373	.	-	0	ID=cds1596;Name=YP_170679.1;Parent=gene1840;Note=monomeric bifunctional protein%3B functions in tryptophan biosynthesis pathway%3B phosphoribosylanthranilate is rearranged to carboxyphenylaminodeoxyribulosephosphate which is then closed to form indole-3-glycerol phosphate;Dbxref=GOA:Q5NE63,InterPro:IPR013798,UniProtKB%2FTrEMBL:Q5NE63,Genbank:YP_170679.1,GeneID:3190977;gbkey=CDS;product=bifunctional indole-3-glycerol phosphate synthase%2Fphosphoribosylanthranilate isomerase;protein_id=YP_170679.1;transl_table=11
NC_006570.2	RefSeq	gene	1884464	1884877	.	-	.	ID=gene1841;Name=FTT_1796c;Dbxref=GeneID:3191782;gbkey=Gene;locus_tag=FTT_1796c
NC_006570.2	RefSeq	CDS	1884464	1884877	.	-	0	ID=cds1597;Name=YP_170680.1;Parent=gene1841;Note=Similar to Q9KF27 Hypothetical protein BH0670 from Bacillus halodurans %28159 aa%29. FASTA: opt: 208 Z-score: 278.0 E%28%29: 1.4e-07 Smith-Waterman score: 208%3B 28.682 identity in 129 aa overlap ORF ftt1796c;Dbxref=UniProtKB%2FTrEMBL:Q5NE62,Genbank:YP_170680.1,GeneID:3191782;gbkey=CDS;product=hypothetical protein;protein_id=YP_170680.1;transl_table=11
NC_006570.2	RefSeq	gene	1884882	1885571	.	-	.	ID=gene1842;Name=msrA2;Dbxref=GeneID:3191678;gbkey=Gene;gene=msrA2;locus_tag=FTT_1797c
NC_006570.2	RefSeq	CDS	1884882	1885571	.	-	0	ID=cds1598;Name=YP_170681.1;Parent=gene1842;Note=Similar to MSA2_CAUCR %28Q9A9E9%29 Peptide methionine sulfoxide reductase from Caulobacter crescentus %28196 aa%29. FASTA opt: 510 Z-score: 598.2 E%28%29: 2e-25 Smith-Waterman score: 510%3B 39.024 identity in 205 aa overlap;Dbxref=GOA:Q5NE61,InterPro:IPR002569,UniProtKB%2FTrEMBL:Q5NE61,Genbank:YP_170681.1,GeneID:3191678;gbkey=CDS;product=peptide methionine sulfoxide reductase;protein_id=YP_170681.1;transl_table=11
NC_006570.2	RefSeq	gene	1885655	1886023	.	-	.	ID=gene1843;Name=FTT_1798c;Dbxref=GeneID:3192283;gbkey=Gene;locus_tag=FTT_1798c
NC_006570.2	RefSeq	CDS	1885655	1886023	.	-	0	ID=cds1599;Name=YP_170682.1;Parent=gene1843;Note=ORF ftt1798c;Dbxref=GOA:Q5NE60,InterPro:IPR004232,UniProtKB%2FTrEMBL:Q5NE60,Genbank:YP_170682.1,GeneID:3192283;gbkey=CDS;product=hypothetical protein;protein_id=YP_170682.1;transl_table=11
NC_006570.2	RefSeq	gene	1886019	1886357	.	-	.	ID=gene1844;Name=FTT_1799c;Dbxref=GeneID:8303688;gbkey=Gene;locus_tag=FTT_1799c;pseudo=true
NC_006570.2	RefSeq	gene	1886426	1886878	.	-	.	ID=gene1845;Name=FTT_1800c;Dbxref=GeneID:3191269;gbkey=Gene;locus_tag=FTT_1800c
NC_006570.2	RefSeq	CDS	1886426	1886878	.	-	0	ID=cds1600;Name=YP_170683.1;Parent=gene1845;Note=ORF ftt1800c;Dbxref=UniProtKB%2FTrEMBL:Q5NE59,Genbank:YP_170683.1,GeneID:3191269;gbkey=CDS;product=hypothetical protein;protein_id=YP_170683.1;transl_table=11
NC_006570.2	RefSeq	gene	1886943	1888528	.	-	.	ID=gene1846;Name=trpG2;Dbxref=GeneID:3190987;gbkey=Gene;gene=trpG2;locus_tag=FTT_1801c;pseudo=true
NC_006570.2	RefSeq	gene	1888532	1890076	.	-	.	ID=gene1847;Name=trpE;Dbxref=GeneID:3190982;gbkey=Gene;gene=trpE;locus_tag=FTT_1802c
NC_006570.2	RefSeq	CDS	1888532	1890076	.	-	0	ID=cds1601;Name=YP_170684.1;Parent=gene1847;Note=with component II%2C the glutamine amidotransferase%2C catalyzes the formation of anthranilate from chorismate and glutamine;Dbxref=GOA:Q5NE58,InterPro:IPR015890,UniProtKB%2FTrEMBL:Q5NE58,Genbank:YP_170684.1,GeneID:3190982;gbkey=CDS;product=anthranilate synthase component I;protein_id=YP_170684.1;transl_table=11
NC_006570.2	RefSeq	gene	1890085	1890372	.	-	.	ID=gene1848;Name=trpR;Dbxref=GeneID:3190986;gbkey=Gene;gene=trpR;locus_tag=FTT_1803c
NC_006570.2	RefSeq	CDS	1890085	1890372	.	-	0	ID=cds1602;Name=YP_170685.1;Parent=gene1848;Note=Similar to TRPR_ECOLI %28P03032%29 Trp operon repressor from E. coli %28107 aa%29. FASTA: opt: 175 Z-score: 239.1 E%28%29: 2e-05 Smith-Waterman score: 175%3B 32.584 identity in 89 aa overlap;Dbxref=GOA:Q5NE57,InterPro:IPR013335,UniProtKB%2FTrEMBL:Q5NE57,Genbank:YP_170685.1,GeneID:3190986;gbkey=CDS;product=trp operon repressor;protein_id=YP_170685.1;transl_table=11
NC_006570.2	RefSeq	gene	1890629	1890705	.	-	.	ID=gene1849;Name=tRNA-Asp %28GTC%29;Dbxref=GeneID:8303719;description=tRNA-Asp %28GTC%29;gbkey=Gene;gene=tRNA-Asp %28GTC%29;locus_tag=FTT_t37
NC_006570.2	RefSeq	tRNA	1890629	1890705	.	-	.	ID=rna46;Dbxref=GeneID:8303719;codons=57;gbkey=tRNA;product=tRNA-Asp
NC_006570.2	RefSeq	exon	1890629	1890705	.	-	.	ID=id309;Parent=rna46;Dbxref=GeneID:8303719;codons=57;gbkey=tRNA;product=tRNA-Asp
NC_006570.2	RefSeq	gene	1890710	1890785	.	-	.	ID=gene1850;Name=tRNA-Thr %28TGT%29;Dbxref=GeneID:8303715;description=tRNA-Thr %28TGT%29;gbkey=Gene;gene=tRNA-Thr %28TGT%29;locus_tag=FTT_t38
NC_006570.2	RefSeq	tRNA	1890710	1890785	.	-	.	ID=rna47;Dbxref=GeneID:8303715;codons=38;gbkey=tRNA;product=tRNA-Thr
NC_006570.2	RefSeq	exon	1890710	1890785	.	-	.	ID=id310;Parent=rna47;Dbxref=GeneID:8303715;codons=38;gbkey=tRNA;product=tRNA-Thr
NC_006570.2	RefSeq	gene	1890846	1892342	.	-	.	ID=gene1851;Name=rng;Dbxref=GeneID:3191606;gbkey=Gene;gene=rng;locus_tag=FTT_1804c
NC_006570.2	RefSeq	CDS	1890846	1892342	.	-	0	ID=cds1603;Name=YP_170686.1;Parent=gene1851;Note=Similar to RNG_ECOLI %28P25537%29 Ribonuclease G from E. coli %28488 aa%29. FASTA: opt: 1439 Z-score: 1642.1 E%28%29: 1.4e-83 Smith-Waterman score: 1439%3B 45.418 identity in 491 aa overlap;Dbxref=GOA:Q5NE56,InterPro:IPR012340,UniProtKB%2FTrEMBL:Q5NE56,Genbank:YP_170686.1,GeneID:3191606;gbkey=CDS;product=ribonuclease G;protein_id=YP_170686.1;transl_table=11
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