/users/218819/scratch/projects/HantaVirus/PhaME/results/Hantaan_virus_84FLi_norepeats.fna /users/218819/scratch/projects/HantaVirus/PhaME/results/Hantaan_virus_Galkino_AA57_2002_norepeats.fna
NUCMER

[S1]	[E1]	[S2]	[E2]	[LEN 1]	[LEN 2]	[% IDY]	[LEN R]	[LEN Q]	[COV R]	[COV Q]	[TAGS]
16	11787	1	11696	11772	11696	84.26	11836	11738	99.46	99.64	Hantaan_virus_84FLi_1_11836	Hantaan_virus_Galkino_AA57_2002_1_11738