/users/218819/scratch/projects/HantaVirus/PhaME/results/Hantaan_virus_HV004_norepeats.fna /users/218819/scratch/projects/HantaVirus/PhaME/results/Hantaan_virus_Fuyuan_Aa_145_norepeats.fna
NUCMER

[S1]	[E1]	[S2]	[E2]	[LEN 1]	[LEN 2]	[% IDY]	[LEN R]	[LEN Q]	[COV R]	[COV Q]	[TAGS]
1	11821	1	11798	11821	11798	84.20	11847	11798	99.78	100.00	Hantaan_virus_HV004_1_11847	Hantaan_virus_Fuyuan_Aa_145_1_11798