/users/218819/scratch/projects/HantaVirus/PhaME/results/Hantaan_virus_HV004_norepeats.fna /users/218819/scratch/projects/HantaVirus/PhaME/results/Hantaan_virus_Fuyuan_Aa_26_norepeats.fna
NUCMER

[S1]	[E1]	[S2]	[E2]	[LEN 1]	[LEN 2]	[% IDY]	[LEN R]	[LEN Q]	[COV R]	[COV Q]	[TAGS]
1	11820	1	11797	11820	11797	84.23	11847	11797	99.77	100.00	Hantaan_virus_HV004_1_11847	Hantaan_virus_Fuyuan_Aa_26_1_11797